Commit History

10 days ago

  1. Delete cdhit_output/reconciled/cdhit80_cluster_membership_partial.tsv with huggingface_hub

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  2. Upload cdhit_output/reconciled/miRNA_membership.tsv with huggingface_hub

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  3. Upload processed/cdhit80_cluster_membership.tsv with huggingface_hub

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  4. Upload predictions/network_nodes.tsv with huggingface_hub

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11 days ago

  1. Upload cdhit_output/reconciled/vault_RNA_membership.tsv with huggingface_hub

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  2. Upload cdhit_output/reconciled/snoRNA_membership.tsv with huggingface_hub

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  3. Upload cdhit_output/reconciled/snRNA_membership.tsv with huggingface_hub

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  4. Upload cdhit_output/reconciled/scaRNA_membership.tsv with huggingface_hub

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  5. Upload cdhit_output/reconciled/rRNA_membership.tsv with huggingface_hub

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  6. Upload cdhit_output/reconciled/predicted_tRNA_membership.tsv with huggingface_hub

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  7. Upload cdhit_output/reconciled/miRNA_membership.tsv with huggingface_hub

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  8. Upload cdhit_output/reconciled/protein_coding_membership.tsv with huggingface_hub

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  9. Upload cdhit_output/reconciled/cdhit80_cluster_membership_partial.tsv with huggingface_hub

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  10. Upload predictions/network_nodes.tsv with huggingface_hub

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12 days ago

  1. CD-HIT-EST protein_coding (-c 0.80 -n 5 -G 1 -d 0), 34h04m local

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14 days ago

  1. Upload cdhit_output/reconciled/lncRNA_membership.tsv with huggingface_hub

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  2. CD-HIT-EST lncRNA (-c 0.80 -n 5 -G 1 -d 0), 8h08m local

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  3. Upload cdhit_output/vault_RNA.cdhit80.clstr with huggingface_hub

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  4. Upload cdhit_output/vault_RNA.cdhit80 with huggingface_hub

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  5. Upload cdhit_output/snoRNA.cdhit80.clstr with huggingface_hub

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  6. Upload cdhit_output/snoRNA.cdhit80 with huggingface_hub

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  7. Upload cdhit_output/snRNA.cdhit80.clstr with huggingface_hub

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  8. Upload cdhit_output/snRNA.cdhit80 with huggingface_hub

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  9. Upload cdhit_output/scaRNA.cdhit80.clstr with huggingface_hub

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  10. Upload cdhit_output/scaRNA.cdhit80 with huggingface_hub

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  11. Upload cdhit_output/rRNA.cdhit80.clstr with huggingface_hub

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  12. Upload cdhit_output/rRNA.cdhit80 with huggingface_hub

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  13. Upload cdhit_output/predicted_tRNA.cdhit80.clstr with huggingface_hub

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  14. Upload cdhit_output/predicted_tRNA.cdhit80 with huggingface_hub

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  15. Upload cdhit_output/miRNA.cdhit80.clstr with huggingface_hub

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  16. Upload cdhit_output/miRNA.cdhit80 with huggingface_hub

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  17. Upload predictions/inference_manifest.json with huggingface_hub

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  18. Upload predictions/network_nodes.tsv with huggingface_hub

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  19. Upload predictions/network_sites.tsv.gz with huggingface_hub

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  20. Upload predictions/network_edges.tsv with huggingface_hub

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15 days ago

  1. Upload cdhit_input/db1_lncRNA.fa with huggingface_hub

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  2. Upload cdhit_input/db1_protein_coding.fa with huggingface_hub

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16 days ago

  1. Upload reference/npinter_v5_human_symbol_pairs.tsv with huggingface_hub

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  2. Upload reference/rnainter_RR_human_symbol_pairs.tsv with huggingface_hub

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  3. Upload reference/representative_id_to_symbol.tsv with huggingface_hub

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  4. Upload model_input/candidate_256nt_pairs.tsv.gz with huggingface_hub

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  5. Upload processed/representative_rnas.tsv with huggingface_hub

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  6. Add rna_meta.zip: entity table + transcript coordinate map + task description (sha256 f9dd6d3a…)

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  7. Remove transit/rna_meta.zip (uploaded by mistake to public repo)

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  8. Transit: rna_meta.zip (sha256 f9dd6d3a…) for Kempner

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17 days ago

  1. Upload README.md with huggingface_hub

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  2. Upload README.md with huggingface_hub

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  3. Upload gpu50_full_256nt_pairs.tsv.gz with huggingface_hub

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  4. Remove transit FASTA (delivered to Kempner, sha verified)

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  5. Transit: representative_rnas.fa (sha256 43ddf99f…) for Kempner

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