content
stringlengths
35
762k
sha1
stringlengths
40
40
id
int64
0
3.66M
def Bulk_emails(): """批次寄信""" users = [ {"name": "xxxxxxxxxx", "email": "xxxxxxxxxx"}, {"name": "xxxxxxxxxx", "email": "xxxxxxxxxx"}, {"name": "xxxxxxxxxx", "email": "xxxxxxxxxx"}, {"name": "xxxxxxxxxx", "email": "xxxxxxxxxx"}, {"name": "xxxxxxxxxx", "email": "xxxxxxxxxx"...
4032c17a63a9f4e4ef4c628a0c726359b2c7ec77
54,500
def model2(): """Build a convnet with dropout and batch normalisation.""" input = layers.Input(shape=input_shape[1:], dtype=np.float) x = layers.Conv1D(10, 5, activation='relu', name='CONV_1')(input) x = layers.Conv1D(10, 5, activation='relu', name='CONV_2')(x) x = layers.BatchNormalization()(x) ...
5f60618cd5f9a7f9597d4ae9e066ed08411331a1
54,501
def in_subnet(cidr, addrs=None): """ Returns True if host is within specified subnet, otherwise False """ for address in addrs: if ip_in_subnet(address, cidr): return True return False
6a454bbbf2ce75584d094fe815c8464676efb45f
54,502
from typing import AnyStr import secrets def constant_time_compare(val1: AnyStr, val2: AnyStr) -> bool: """Return True if the two strings are equal, False otherwise.""" return secrets.compare_digest( encoding.force_bytes(val1), encoding.force_bytes(val2) )
d28e1881f3da840b863b11ee5a12c549cb9de037
54,503
def make_company_node(c: dict) -> Node: """Create new Company node for dict """ all_attributes = c.get('all_attributes', {}) return Node('Company', name=c['name'], company_number=c['company_number'], federal_state=all_attributes.get('federal_state'), ...
3fbf35b3133f8eb7e865e6e703de061ed7e72c15
54,504
def problem_reciprocal_exponential(x): """Return recrprocal exponential function.""" return np.exp(-x)
070e39a1d116907d2ce29527f28e02d57aca3208
54,505
import datetime from azure.cli.core._session import VERSIONS def get_cached_latest_versions(versions=None): """ Get the latest versions from a cached file""" if not versions: versions = _get_local_versions() if VERSIONS[_VERSION_UPDATE_TIME]: version_update_time = datetime.datetime.strpt...
7ec17fe7768295d7108bc857d252378300bb8ee0
54,506
def get_time(raw_time): """ Get treated time value from the raw provided time. # 2020/09/05T05:21:48z # 2020-09-05T05:21:48z # dtr = dt.replace("/","-")[:-1] :param raw_time: <string> :return treated_time: <datetime> """ treated_time = raw_time.replace("/", "-") return treate...
cccdfc8710b63c2f273fa0e8c638c5fc6e66a1b8
54,507
import os def update_table(contents, filename, last_modified): """ This is the first function called when the dashboard opens Takes in data from upload or uses default Creates pkl file of DF to be accessed Also takes in values from filters Need to adjust this so if the user uploads a new file...
fb73870dfda5e78cbd6e682e8f70853aa58da672
54,508
import math def noise_floor(nf=1, bandwidth=1, noise_temp=290): """ Calculate noise floor of a receiver. :param nf: Noise figure in dB :param bandwidth: bandwidth in Hz :param noise_temp: noise temperature in Kelvin """ return ( 10 * math.log10(KBOLTZMAN * noise_temp * 1000) + nf ...
2c951b40f9526b9d3b247614d4af9679efc2983e
54,509
def get_round_from_jitemid(jitemid, cursor): """Take a jitemid, return a round.""" round_jitemid_mapping = { (0, 'br negative one') } # if jitemid is a key in the dictionary: # return the value # otherwise just return "UNKNOWN ROUND" return round
9242e098d31312c3181377d5bb8f4dfaf33c29ca
54,510
import urllib def safe_urlsplit(url): """This is a hack to prevent the regular urlsplit from splitting around question marks. A question mark (?) in a URL typically indicates the start of a querystring, and the standard library's urlparse function handles the querystring separately. Unfortunately, qu...
273b97bfb43107f7cddeb144c0dd284ca444c84c
54,511
import six def _ConvertInteger(value): """Convert an integer. Args: value: A scalar value to convert. Returns: The integer value. Raises: ParseError: If an integer couldn't be consumed. """ if isinstance(value, float) and not value.is_integer(): raise ParseError('Couldn\'t parse integer...
d5ca07d28827729df1bac9f1d446c623804fb4ba
54,512
import logging def to_segments(data, num=32): """ These code is taken from: https://github.com/rajanjitenpatel/C3D_feature_extraction/blob/b5894fa06d43aa62b3b64e85b07feb0853e7011a/extract_C3D_feature.py#L805 :param data: list of features of a certain video :return: list of 32 segments """ ...
378da87dbe710ed4e27580e6fd166c14afeab605
54,513
import os def draw_graph_graphviz(vertices, edges, image=None, engine="dot"): """ Draws a graph using :epkg:`Graphviz`. @param edges see below @param vertices see below @param image output image, None, just returns the output @param engine ...
232b596cc9a7d95d8d2159c1387b1419c385f2b6
54,514
async def discord_has_token(discord_id: int, db: AsyncSession = Depends(get_db_session)): """Return if a user has a valid token""" profile = await discord_users.get_profile_from_discord_id(discord_id) if not profile: return DestinyHasTokenModel(token=False, value=None) no_token = await discord_...
575f87a27ecee04b9a411db24d182f64570c4309
54,515
import os def calc_FID(gen, batchsize=100, stat_file="%s/cifar-10-fid.npz" % os.path.dirname(__file__), dst=None, path=None, n_ims=5000, num_evals=1, training=True): """Frechet Inception Distance proposed by https://arxiv.org/abs/1706.08500""" @chainer.training.make_extension() def evaluatio...
d1b61c4fb98cdde686c5b29ea48571391f9f5557
54,516
def tokenize_text(text): """ Tokenizes and tags a given text. Args: text (str): Text to process. Returns: List(Tuple[str, str]): List of word-tag pairs. """ nltk.download('punkt') nltk.download('averaged_perceptron_tagger') tokens = nltk.word_tokenize(text) tagged =...
d61a696a0886a8aadc4aa9b202cbc246fb393816
54,517
import torch def kl_loss_diag(mean, logvar): """ KL divergence of normal distributions with diagonal covariance and standard multivariate normal. :param mean1: mean of distribution 1 :param logvar1: logarithm of the covariance diagonal of distribution 1 :return: KL divergence of the given distrib...
e8cedc4ccebc120a4367f9ce52ac96210beb0b5f
54,518
def randomize(df, seed=None): """Develop a randomization function that randomizes all of a dataframe's cells then returns that randomized dataframe. This function also accepts a random seed for reproducible randomization""" df = df.copy() columns = df.columns df = shuffle(df[columns], random_st...
1ddb9623732ff16ce464b3b0fee4728c34a1e152
54,519
def add_class(add, class_): """Add to a CSS class attribute. The string `add` will be added to the classes already in `class_`, with a space if needed. `class_` can be None:: >>> add_class("foo", None) 'foo' >>> add_class("foo", "bar") 'bar foo' Returns the amended cl...
b5f12ea7a5c573b65ebbd84d987a5de5090e33d0
54,520
def get_model(point_cloud, is_training,num_classes,normal = False,bn_decay=None,bn=True, num_keypoints = 192,k = 16,nsample = 32): """ Classification PointNet, input is BxNx3, output BxNUM_CLASSES """ b = point_cloud.get_shape()[0].value n = point_cloud.get_shape()[1].value end_points = ...
c8334171394f4d3e872ef1e9d86af75225e86a47
54,521
import _random def preview_synthetic_training_data(data, target, backgrounds=None, verbose=True, **kwargs): """ A utility function to visualize the synthetically gene...
cbcd15c732d6a6ed8fa29d584c497d20bf28f19e
54,522
def guessColorName(nameMe): """Return a tuple (distance, guessed human-name of a color).""" return min(colors, key=lambda x: distance(nameMe, x))
b1562865c665ff453f309675cc31bb049e88cbbb
54,523
import re def to_lower_camel_case(str_to_convert): """ This function will convert any string with spaces or underscores to lower camel case string :param str_to_convert: target string :return: converted string """ if type(str_to_convert) is not str: raise TypeError("The method only tak...
8bfd591fcbfcff51b463596266cba1403f2d6153
54,524
def ordinal_suffix(n): """Return the ordinal suffix for a positive integer >>> ordinal_suffix(0) '' >>> ordinal_suffix(1) 'st' >>> ordinal_suffix(2) 'nd' >>> ordinal_suffix(3) 'rd' >>> ordinal_suffix(4) 'th' >>> ordinal_suffix(11) 'th' >>> ordinal_suffix(12) 'th' >>> ordinal_suffix(13) ...
53617737aaf28c2d239301358f01d1b0cea9f6cb
54,525
def sentence_to_token_ids(sentence, vocabulary, max_sequence_length): """Convert a string to a list of integers representing token-ids.""" words = sentence.strip().split() if len(words) > max_sequence_length: words = words[:max_sequence_length] return [vocabulary.get(w, UNK_ID) for w in words]
77ab881e8da7400a1db388e4db393e39b2aaab8f
54,526
def _collect_facts(resource): """Transfrom cluster information to dict.""" facts = { 'identifier' : resource['ClusterIdentifier'], 'create_time' : resource['ClusterCreateTime'], 'status' : resource['ClusterStatus'], 'username' : resource['MasterUs...
a881451ac409288b93160d4cec4b27a3547fe3f9
54,527
import torch import sys from sys import version def vendor_requirements_available(vendor_requirements: TypeDict[str, TypeAny]) -> bool: """ Check whether torch or python version is supported Args: vendor_requirements: dictionary containing version of python or torch to be supported Returns: ...
254d18b1c3725772b7fd10c787f8c793d90ff0fe
54,528
from scipy.stats import percentileofscore import seaborn as sns import logging def correlate_distance_matrix_quadrants(distmat, figdir, name): """ Take the lower triangle matrix of each quadrant in the distance matrix, and then correlate all quadrants lower triangle matrices with eachother. Repeat thi...
18185ee2f2e2aa7f3c46d3dac904d7bc7402a26f
54,529
def leave_one_in(feature_groups): """For each group, return a copy of just that group Args: feature_groups (list) The feature groups to apply the strategy to Returns: A list of feature dicts """ return feature_groups
5933925d909b6777f916b6bc585734dd768477b3
54,530
import queue def push(ui, repo, patch=None, **opts): """push the next patch onto the stack By default, abort if the working directory contains uncommitted changes. With --keep-changes, abort only if the uncommitted files overlap with patched files. With -f/--force, backup and patch over uncommitt...
9c37243b75038c23faec50b774efed6af9bad1ed
54,531
def disable() -> dict: """Disables log domain, prevents further log entries from being reported to the client.""" return {"method": "Log.disable", "params": {}}
f5be0972e43d24fc4b69fbeb2c13850d68af52bf
54,532
def repeat_each_element(element: tf.Tensor, number_of_repeats: int) -> tf.data.Dataset: """ A dataset mappable function which repeats the elements a given number of times. :param element: The element to map to to repeat. :param number_of_repeats: The number of times to repeat the element. :return: ...
d2bc479a5b2eced6a3c906e14ce964fd4d0c3d84
54,533
import glob import os def read_instance(path, shape=(4, 240, 240, 155)): """ Read a 3-d image with corresponding mask """ x = np.empty(shape) for i, channel in enumerate(CHANNELS): channel_path = glob.glob(os.path.join(path, f"*{channel}.nii.gz"))[0] x[i] = nib.load(channel_path).get_fdat...
01356c29641d82acbc99feff4a235915be20d19f
54,534
def ncc(I, J): """ Code comes from: Unsupervised Learning for Fast Probabilistic Diffeomorphic Registration Adrian V. Dalca, Guha Balakrishnan, John Guttag, Mert R. Sabuncu MICCAI 2018. """ eps = 1e-5 # assumes I, J are sized [batch_size, *vol_shape, nb_feats] ndims = len(I...
fb29e1381ab0d8d3ca0521792d4d67d82d5e2b32
54,535
from typing import Sequence from typing import Hashable from typing import Tuple import string import unicodedata def equivalent_string( seq_x: Sequence[Hashable], seq_y: Sequence[Hashable] ) -> Tuple[str, str]: """ Returns a string equivalent to a sequence, for comparison. As some methods offered by...
e5c4a4c31b687449ac16e25a6d6fe0dcf65f8266
54,536
def _get_subtopics( corpus, dictionary, num_topics, num_words, depth, passes=10 ): """The recursive function""" ldamodel = models.ldamodel.LdaModel( corpus, num_topics=num_topics, id2word=dictionary, passes=passes ) lda_output = {} topics = ldamodel.ge...
1b509e77b0b95a6ef55c2963ed5df3c62b59f3ee
54,537
def normalizeimage(image, depth=256, verbose=False): """Normalize image to chosen bit depth""" if verbose: print 'Normalizing image from [' + str(numpy.min(image)) + ':' + str( numpy.max(image)) + '] to', normalizedimage = ((image - numpy.min(image)) * (depth / (numpy.max( image)...
bddbb1bb1538e6ef47dfb88fbf394fe10cec0388
54,538
def _strftime(d): """ Format a date the way Atom likes it (RFC3339?) """ return d.strftime('%Y-%m-%dT%H:%M:%SZ%z')
1eebf1bff9c68ba4649f1377f16b4b9feb737f01
54,539
def append_entrypoint(app: Flask, entrypoint: str, location: str) -> Flask: """Add routes/functions defined in entrypoint.""" mod = pw.import_entrypoint(entrypoint, location) fm = pw.get_func_annotations(mod) if not any([e.endpoint for e in fm]): raise Exception("no endpoints defined") ope...
e52c230cc24e52eb918a6f1eeb5c3ebd8f783289
54,540
from typing import Union from typing import List def _extract_process_nodes(cube: Union[dict, DataCube], process_id: str) -> List[dict]: """Extract process node(s) from a data cube or flat graph presentation by process_id""" if isinstance(cube, DataCube): cube = cube.flat_graph() return [d for d i...
353eeaaf36d26fe8f460246d22327f4032fd10f8
54,541
import imp import marshal def read_pyc(filename): """ Read the code inside a bytecode compiled file if the MAGIC number is compatible Returns: a code object """ data = read_file(filename, 'rb') if not is_gae and data[:4] != imp.get_magic(): raise SystemError('compiled code...
660f352b25467f12b8db1d80fb4140dc679c9b94
54,542
def gravity_and_floor(x, y, floor, g=1, scale=100): """ A hard wall at the bottom of the view and a linear downward potential. Note: y increases in the downward direction. """ v = np.zeros((len(y), len(x))) v += g*np.abs(y[:,None]-floor) v[y>floor] = scale return v
fdaa202d92813a383b7061506e6737a7e96476b5
54,543
import logging def action_check(opts, continuation=arch_check): """ Continue analysis only if it compilation or link. """ if opts.pop('action') <= Action.Compile: return continuation(opts) else: logging.debug('skip analysis, not compilation nor link') return None
2fed961b21bb6e657892789071d62ed2c02ee6ac
54,544
def scan(a, dim=0, op=BINARYOP.ADD, inclusive_scan=True): """ Generalized scan of an array. Parameters ---------- a : af.Array Multi dimensional arrayfire array. dim : optional: int. default: 0 Dimension along which the scan is performed. op : optional: af.BINARYOP. def...
d1697420593e1fb82d93a333d6afd23df233b3f9
54,545
def get_centor(feature, centors): """ 迭代计算聚类中心 :param node: 待判断数据[r,g,b] :param centors: init[cen1,cen2...] :param classes: [[node of class1],[node of class2],......[node of classk]] :return: cens=[cen1,cen2...] """ k = len(centors) # 建立k个类别数据的空集合 classes = [[] for _ in range(k)]...
e0dd6e62f76a3aad0f01fd87f0da6b697a49431b
54,546
def food(request): """Show food. """ tracker = init_tracker(request) tracker.track_page_view("http://0.0.0.0:8000/food", "food_page") food = Food.objects.filter(owner=request.user).order_by('date_added') is_empty = True for f in food: if f.quantity > 0: is_empty = False ...
0fbc0677375548d0560b61a325ee5da74cfdb69f
54,547
from ..plot_utils import make_3d_axis, Frame def plot_basis(ax=None, R=None, p=np.zeros(3), s=1.0, ax_s=1, strict_check=True, **kwargs): """Plot basis of a rotation matrix. Parameters ---------- ax : Matplotlib 3d axis, optional (default: None) If the axis is None, a new 3d axi...
f53a5edf1f33050a7dfb9a3f8f4ef4f01a25b6f4
54,548
def slicify(index, length=-1): """ Takes an index as an instance of a list, a tuple, an np.ndarray, an int, or anything else. In the case of a list, a tuple, or a np.ndarray return a slice if possible, else return an np.ndarray. In the case of an int, return slice(int, int+1). In the case of anythin...
2885163f9affc7c3d886e3ba3a070dd3f6287136
54,549
def run_async_asyncio(func, *args, **kwargs): """ Runs an Async Function in a Sync Call using asyncio in sync calls """ if not iscoroutinefunction(func): func = AsyncFunction(func) coro = func(*args, **kwargs) return asyncio_run(coro)
4f746a538579013090b64dc45d5204988e0ca60a
54,550
from typing import Iterable from typing import Callable def get_combined_revision(functions: Iterable[Callable]) -> forge.Revision: """Combine the parameters of all revisions into a single revision""" params = {} for func in functions: params.update(forge.copy(func).signature.parameters) retur...
643128e545fc4a6f54d3d2314d62c986ea7971b6
54,551
def create_layer_for_inference(layer: _TrainingWrapper, algorithm): """Internal API to create layer for inference with weight compression.""" # TODO(tfmot): move these checks to public API for # visibility. if not isinstance(algorithm, object): raise ValueError('`_create_layer_for_inference` requires `algor...
e57994255c9c3623506f187940f9147f124f1251
54,552
import collections def merge(d, u): """ Recursively updates a dictionary. Example: merge({"a": {"b": 1, "c": 2}}, {"a": {"b": 3}}) = {"a": {"b": 3, "c": 2}} """ for k, v in u.items(): if isinstance(v, collections.Mapping): r = merge(d.get(k, {}), v) d[k] = r ...
d96d95fd7a236429fa5c278c800832205e073cd4
54,553
def _numba_i0(x): """ computes i0 to 15 digits """ if x < 0: x = -x if x <= 8.0: y = x/2.0 - 2.0 return np.exp(x)*_numba_chbevl(y, i0_lt8) else: y = 32.0/x - 2.0 return np.exp(x)*_numba_chbevl(y, i0_gt8)/np.sqrt(x)
fded0baf18e8fca5b5463a7ecf633a510ee629fe
54,554
def parse_args(parser): """ Parse commandline arguments. """ parser.add_argument('--waveglow', type=str, required=True, help='Full path to the WaveGlow model checkpoint file') parser.add_argument('-o', '--output', type=str, required=True, help='Directo...
f0333da61342bd40055894330aa7e0e0eadf434a
54,555
import math def track_day_test(year, month, day, hour, lat, lon, elevdlim=-2.5): """ Given date, time, lat and lon calculate if the sun elevation is > elevdlim. If so return daytime is True This is the "day" test used by tracking QC to decide whether an SST measurement is night or day. Th...
2496099eab7ed970236d59c69949ce1ef4f93374
54,556
def arn_has_slash(arn): """Given an ARN, determine if the ARN has a stash in it. Just useful for the hacky methods for parsing ARN namespaces. See http://docs.aws.amazon.com/general/latest/gr/aws-arns-and-namespaces.html for more details on ARN namespacing.""" if arn.count("/") > 0: return True ...
a3c36eba79bc572ae5389aea9c0ef0a0924cc7b3
54,557
from typing import Callable from typing import List def calculate_gradient(f: Callable, x: List[float]) -> np.array: """Return the gradient of a function at a given point Args: f (Callable): function in consideration x (List[float]): point at which gradient is evaluated Returns: ...
cf9866f21006e5ad3c7af8b5328a8224caae8c05
54,558
import sys def stereographic_proj( normals, intensity, max_angle, savedir, voxel_size, projection_axis, min_distance=10, background_south=-1000, background_north=-1000, save_txt=False, cmap=default_cmap, planes_south=None, planes_north=None, plot_planes=True, ...
365a795270fbae696fc688be501396a4b177e6d7
54,559
import typing def keccak_224(data: typing.Optional[bytes] = None) -> Keccak: """Returns a 224-bit keccak hash object""" return Keccak(c=448, r=1152, n=224, name='keccak_224', data=data)
e34482d3fe4d4a3ad9976ad7647b6409f8a7768e
54,560
def decr_id(id, id_remove): """Decrement a single id, with the aim of closing the gap at id_remove. The logic used is similar to that incr_id_after. """ k = len(id_remove) if len(id) >= k and id[:k-1] == id_remove[:k-1] and id[k-1] > id_remove[k-1]: return id[:k-1] + (id[k-1] - 1,) + id...
51f9a2254e1736a4e6014a8714789186ee4a3c63
54,561
from typing import Dict def get_ctf_json(json: Dict) -> Dict: """ Get ctf in rawsec json. Parameters ---------- json: Dict rawsec json. Returns ------- Dict ctf dict. """ return json["ctf_platforms"] if "ctf_platforms" in json else {}
3ef14283c2468a41685c43051823807b7e23d561
54,562
from pesummary.core.plots.plot import _make_corner_plot def _make_extrinsic_corner_plot(samples, latex_labels, **kwargs): """Generate the corner plots for a given approximant Parameters ---------- opts: argparse argument parser object to hold all information from the command line samples:...
be3a9303a95f5eac4d693e70970d269ebf7663d1
54,563
import io def GetOperationError(error): """Returns a ready-to-print string representation from the operation error. Args: error: operation error object Returns: A ready-to-print string representation of the error. """ error_message = io.StringIO() resource_printer.Print(error, 'yaml', out=error_...
65df8d8861212c381dc0e234e83250ec6f577bb5
54,564
import logging def hogbom_clean(dirty, psf, gamma=0.1, threshold="default", niter="default"): """ Performs Hogbom Clean on the ``dirty`` image given the ``psf``. Parameters ---------- dirty : np.ndarray float64 dirty image of shape (ny, ...
f5d920e12707ecdb197b442606401c1d90e8f887
54,565
from pyspark.pandas import sql_processor from typing import Optional from typing import Union from typing import List from typing import Any import os import warnings def sql( query: str, index_col: Optional[Union[str, List[str]]] = None, **kwargs: Any, ) -> DataFrame: """ Execute a SQL query and ...
100b76aabc718796cf6000a27bc8e657150474b2
54,566
def to_cartisian(r, theta): """ Take two numbers or np arrays and return cartisian representation of the comblex number(s) r*exp(i*theta) Return: tuple (x, y) """ x = r*np.cos(theta) y = r*np.sin(theta) return (x, y)
de507866eb912f93a14639fc4157326b21a9196d
54,567
def _get_team_(client, jwt, project_id): """Get team and return response.""" headers = ss_client_auth_header(jwt) response = client.get(TEAM_API.replace(':project_id', project_id), headers=headers, content_type='application/json') return response
67de2be6391a99209a08d92a6150ffd69a61847b
54,568
def counted ( f ): """create 'counted' function to know number of function calls Example ------- >>> fun = ... >>> func = counted ( fun ) ## use as function >>> @counted >>> def fun2 ( ... ) : return ... """ def wrapped ( *args, **kwargs ): wrapped.calls += 1 ...
75f8e297910c049b551f38b440d99b21c6c74caf
54,569
def get_latex_permutations(rows, cols, tarray, title): """ Creates a latex table as a string. The string can be cut and paste into the dissertation. :param rows: number of rows in the board. :param cols: number of columns in the board. :param tarray: 2D array of the table contents. :para...
261bb367a948731748441d10afd4dcee793624b5
54,570
import logging def load(file, collapsed=True, index=None): """Loads Laue diffraction data.""" if file['stacked'] is True: files = loadstack(file) if file['ext'] == 'h5': vals = loadh5files2(files, file['h5']['key'], file['frame']) else: if file['ext'] == 'h5': ...
be2820949555d79fc76e261c587ee229459b6901
54,571
def format_map_to_vector(feature_lists: list, start: int, end: int): """ Convert map into vector :param feature_lists: list of features, whose elements are maps. :param start: starting element within list :param end: ending element within list :return: vector (list) of selected features """ ...
a593c3cf12d154e924955f3fcf20dc616c2771ac
54,572
def tree_subtract_mean(oks: PyTree) -> PyTree: """ subtract the mean with MPI along axis 0 of every leaf """ return jax.tree_map(partial(subtract_mean, axis=0), oks)
9eed40b488799a44583503118fd419bc530a3e90
54,573
def patch_expsets_otherprocessedfiles_for_queried_files(connection, **kwargs): """ Update the Higlass Items from Experiment Set Other Processed Files (aka Supplementary Files). Args: connection: The connection to Fourfront. **kwargs, which may include: called_by(opti...
86f113d7f7dd92f9fdfa356ccaca7aeebdc6dea9
54,574
import sys def running_in_notebook_or_ipython(): """ Returns ``True`` if the module is running in IPython kernel, ``False`` if in IPython shell or other Python shell. """ return "ipykernel" in sys.modules
77aacd398ac99b2370dd500fcbf40bedcb35f573
54,575
def selector(possibilities, names): """ Print a selector of all possibilities, and validate the choice against the "names" list """ # Print all possibilities for i in range(len(possibilities)): print(f'({i +1}) {possibilities[i]}') names.append(str(i + 1)) skip_lines(1) # Ask a user...
6cec0f732d8161b46899db82a7171cc30be681fa
54,576
def splinit(fun, data, i, s, smax, par, x0, n0, u, v, x, y, x1, x2, L, l, xmin, fmi, ipar, level, ichild, f, xbest, fbest, stop): """ splits box # par at level s according to the initialization list in the ith coordinate and inserts its children and their parameters in the list """ n...
962fd2168ed0c16667dab8fad031bbebf41fb7d3
54,577
def handle_effect_results(permutation_result): """Takes in output from multiprocess_permutation function and converts to a better formatted dataframe. Parameters ---------- permutation_result : list output from multiprocess_permutation Returns ------- permutation_df : pd.DataFr...
564362c5db1916ff2dbb33cd253da5270edb7201
54,578
def get_one_carrot_input(): """ Obtains pre-defined testing base astar that is assured not to fail """ args = g08.get_args() args.a_estrella = True args.vision = 2 args.zanahorias = 2 args.tablero_inicial = "_generated_inputs_/4x4(1).txt" result = g08.get_result(algorithm="AStar", ar...
27ebd29c4d9ec6b01a1abb070b96d9e4c9413ee9
54,579
def canvas_pull ( canvas , ratio = 0.80 , left_margin = 0.14 , right_margin = 0.05 , bottom_margin = 0.14 , top_margin = 0.05 , hSpacing = 0.0 , vSpacing ...
03b765901eb276ecdabf70a849ac9383882f1630
54,580
def soft_threshold(X, thresh): """Proximal mapping of l1-norm results in soft-thresholding. Therefore, it is required for the optimisation of the GFGL or IFGL. Parameters ---------- X : ndarray input data of arbitrary shape thresh : float threshold value Returns -------...
acf2b4db26bf821a58b5a29ab31a907325068bb8
54,581
import argparse import logging def iteration(data: dict, args: argparse.Namespace, it: int) -> dict: """Perform self-learning iteration. See Vulic et al, 2019, for details.""" # (1) update embeddings from in-dictionary terms data['dico'].update_embeddings(data['src'], data['trg']) # (2) solve procru...
519fb4e0c2276e6c5c66ab573f93e9995f1575f1
54,582
def _to_ffmpeg_time(n): """ Format number of seconds to time expected by FFMPEG. n: int Time in seconds to format. returns: Formatted time in FFMPEG format. """ m, s = divmod(n, 60) h, m = divmod(m, 60) return '%d:%02d:%09.6f' % (h, m, s)
64808a801dd4008ef61df305efa936ee1e9f5c5b
54,583
def compute_similarity(network, feature_matrix): """ Builds a weighted graph, where each edge (u, v, sim) is constructed by computing the Jaccard similarity (sim) of the attributes of nodes u and v. For the sake efficiency, a vectorized implementation is used :param network: The network :param f...
324b417aa7c439050147931dacb21ec61b2243b1
54,584
def vxxxxx(p, vmass, nhel, nsv): """ Defines a vector wavefunction. nhel=4 is for checking BRST. Input momenta have shape (num events, 4). Parameters ---------- p: tf.Tensor, vector boson four-momenta of shape=(None,4) vmass: tf.Tensor, boson mass of shape=() nhel: tf.Tensor...
795bf250ac512416fac79601ba8bc9be692eeb38
54,585
from typing import List from typing import Dict def find_properties_object(path: List[str], field: str, properties) -> Dict[str, Dict]: """ This function is trying to look for a nested "properties" node under the current JSON node to identify all nested objects. @param path JSON path traversed so far...
748399f8b8fcb6d04535059557ce1f9c9a02cffa
54,586
def get_nodes(lines): """ Return node register IDs provided lines from a trace file. :param lines: The lines from the trace file to be searched. """ nodes = [] for line in lines: found = re_node_register.search(line) if found: node_id = found.group(2) ...
9faf8b60d734d381e0664a76bca1765620b5c510
54,587
import argparse def build_arg_parser(): """ Builds a standard argument parser with arguments for talking to vCenter -s service_host_name_or_ip -o optional_port_number -u required_user -p optional_password """ parser = argparse.ArgumentParser( description='Standard Arguments f...
563766fbac1e3b6f25a11ac30518515fb7ae16fd
54,588
def are_infinity_coordinates(coordinates_value): """ To check whether the coordinates are infinite. Parameters ---------- coordinates_value: np.array, or list x and y coordinates you want to check. Returns ---------- bool Are coordinates infi...
5958790c666e550870c149019cc57480145ba6be
54,589
import os def get_twitter_api_keys(sport: str, area: str): """Load twitter api keys. API keys for twitter account for a sport + area must be defined in an environment variable. E.g. keys for latu updates in oulu must be defined in env var LATUBOT_KEYS_LATU_OULU. The value of the env var must con...
c981d7b8872f6ae73b215414b1ede1a24af31453
54,590
import os import pickle def assemble_pysb(stmts, data_genes, out_file): """Return an assembled PySB model.""" base_file, _ = os.path.splitext(out_file) #stmts = ac.load_statements('%s.pkl' % base_file) stmts = preprocess_stmts(stmts, data_genes) # Make a SIF model equivalent to the PySB model ...
06c5ca60f2a0a55f8eeb748a7d3502891f70b32d
54,591
import json def read_cam_from_json(path): """generates a Camera object from a json file""" with open(path) as f: config = json.load(f) intrinsic = config['intrinsic'] coefficients = [intrinsic['k1'], intrinsic['k2'], intrinsic['k3'], intrinsic['k4']] cam = Camera( rotation=SciRot...
eae61d7d4757cf3df602c7f5bb16a6d3488f6ba1
54,592
def get_angle_encoding_model(theta, neural_data, ang_bin_edges, speed=None, min_speed=None, max_speed=None, data_type='spikes', n_xval=5): """ :param theta: array n_samps of angles in radians :param neural_data: array n_units x n_samps of firing rates :param ang_bin_edges: b...
bec04c6a42562bbaec5f25a541ebb60797e78221
54,593
import timeit import operator def optimize(solver, func, maximize=True, max_evals=0, pmap=map, decoder=None): """Optimizes func with given solver. :param solver: the solver to be used, for instance a result from :func:`optunity.make_solver` :param func: the objective function :type func: callable ...
77f710af596b5a0a7024105379e146b9f28a333d
54,594
import logging import requests def uninstall_callback(): """Hipchat will hit this endpoint when the integration has been uninstalled by the end user.""" redirect_url = request.args.get('redirect_url') installable_url = request.args.get('installable_url') logging.info("Getting installable info from %s...
affed9a5e69b62502d7459924c820c227e34ec52
54,595
import pathlib import re def normalized_uri(root_dir): """ Attempt to make an LSP rootUri from a ContentsManager root_dir Special care must be taken around windows paths: the canonical form of windows drives and UNC paths is lower case """ root_uri = pathlib.Path(root_dir).expanduser().re...
230091cad5dedbe14c2e7b0f6e726e640fd63495
54,596
from typing import Dict from typing import Any import importlib def _serialize(selector: str, class_name: str, values: Dict[str, Any]): """Serializes message using the selector and defined class name.""" package_name = _find_package_name(selector) class_object = getattr(importlib.import_module(package_nam...
c31c62f6c5626f947ea4ddc75606102eb7fd8769
54,597
import json def download_prs(source_url, source, credentials): """ INPUT: source_url: the root url for the GitHub API source: the team and repo '<team>/<repo>' to retrieve prs from OUTPUT: retrieved prs sorted by their number if request was successful. False otherwise """ url = sou...
4994e84f9cf429b3ac0297ef132663b2f4c3eebe
54,598
import subprocess def align(fh, transl=True): """ Translate and align pangenome cluster fasta file """ align_exe = MuscleCommandline( r'C:\Users\matthewwhiteside\workspace\b_ecoli\muscle\muscle3.8.31_i86win32.exe', clwstrict=True) # Align on stdin/stdout proc = subproces...
7158690a2e46aff26fd2d36617e8f5240363ec3a
54,599