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| // This file is part of Eigen, a lightweight C++ template library | |
| // for linear algebra. | |
| // | |
| // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr> | |
| // | |
| // This Source Code Form is subject to the terms of the Mozilla | |
| // Public License v. 2.0. If a copy of the MPL was not distributed | |
| // with this file, You can obtain one at http://mozilla.org/MPL/2.0/. | |
| // Ensure the ::google namespace exists, required for checking existence of | |
| // ::google::dense_hash_map and ::google::sparse_hash_map. | |
| namespace google {} | |
| namespace Eigen { | |
| /** Represents a std::map | |
| * | |
| * \see RandomSetter | |
| */ | |
| template<typename Scalar> struct StdMapTraits | |
| { | |
| typedef int KeyType; | |
| typedef std::map<KeyType,Scalar> Type; | |
| enum { | |
| IsSorted = 1 | |
| }; | |
| static void setInvalidKey(Type&, const KeyType&) {} | |
| }; | |
| /** Represents a std::unordered_map | |
| * | |
| * To use it you need to both define EIGEN_UNORDERED_MAP_SUPPORT and include the unordered_map header file | |
| * yourself making sure that unordered_map is defined in the std namespace. | |
| * | |
| * For instance, with current version of gcc you can either enable C++0x standard (-std=c++0x) or do: | |
| * \code | |
| * #include <tr1/unordered_map> | |
| * #define EIGEN_UNORDERED_MAP_SUPPORT | |
| * namespace std { | |
| * using std::tr1::unordered_map; | |
| * } | |
| * \endcode | |
| * | |
| * \see RandomSetter | |
| */ | |
| template<typename Scalar> struct StdUnorderedMapTraits | |
| { | |
| typedef int KeyType; | |
| typedef std::unordered_map<KeyType,Scalar> Type; | |
| enum { | |
| IsSorted = 0 | |
| }; | |
| static void setInvalidKey(Type&, const KeyType&) {} | |
| }; | |
| namespace google { | |
| // Namespace work-around, since sometimes dense_hash_map and sparse_hash_map | |
| // are in the global namespace, and other times they are under ::google. | |
| using namespace ::google; | |
| template<typename KeyType, typename Scalar> | |
| struct DenseHashMap { | |
| typedef dense_hash_map<KeyType, Scalar> type; | |
| }; | |
| template<typename KeyType, typename Scalar> | |
| struct SparseHashMap { | |
| typedef sparse_hash_map<KeyType, Scalar> type; | |
| }; | |
| } // namespace google | |
| /** Represents a google::dense_hash_map | |
| * | |
| * \see RandomSetter | |
| */ | |
| template<typename Scalar> struct GoogleDenseHashMapTraits | |
| { | |
| typedef int KeyType; | |
| typedef typename google::DenseHashMap<KeyType,Scalar>::type Type; | |
| enum { | |
| IsSorted = 0 | |
| }; | |
| static void setInvalidKey(Type& map, const KeyType& k) | |
| { map.set_empty_key(k); } | |
| }; | |
| /** Represents a google::sparse_hash_map | |
| * | |
| * \see RandomSetter | |
| */ | |
| template<typename Scalar> struct GoogleSparseHashMapTraits | |
| { | |
| typedef int KeyType; | |
| typedef typename google::SparseHashMap<KeyType,Scalar>::type Type; | |
| enum { | |
| IsSorted = 0 | |
| }; | |
| static void setInvalidKey(Type&, const KeyType&) {} | |
| }; | |
| /** \class RandomSetter | |
| * | |
| * \brief The RandomSetter is a wrapper object allowing to set/update a sparse matrix with random access | |
| * | |
| * \tparam SparseMatrixType the type of the sparse matrix we are updating | |
| * \tparam MapTraits a traits class representing the map implementation used for the temporary sparse storage. | |
| * Its default value depends on the system. | |
| * \tparam OuterPacketBits defines the number of rows (or columns) manage by a single map object | |
| * as a power of two exponent. | |
| * | |
| * This class temporarily represents a sparse matrix object using a generic map implementation allowing for | |
| * efficient random access. The conversion from the compressed representation to a hash_map object is performed | |
| * in the RandomSetter constructor, while the sparse matrix is updated back at destruction time. This strategy | |
| * suggest the use of nested blocks as in this example: | |
| * | |
| * \code | |
| * SparseMatrix<double> m(rows,cols); | |
| * { | |
| * RandomSetter<SparseMatrix<double> > w(m); | |
| * // don't use m but w instead with read/write random access to the coefficients: | |
| * for(;;) | |
| * w(rand(),rand()) = rand; | |
| * } | |
| * // when w is deleted, the data are copied back to m | |
| * // and m is ready to use. | |
| * \endcode | |
| * | |
| * Since hash_map objects are not fully sorted, representing a full matrix as a single hash_map would | |
| * involve a big and costly sort to update the compressed matrix back. To overcome this issue, a RandomSetter | |
| * use multiple hash_map, each representing 2^OuterPacketBits columns or rows according to the storage order. | |
| * To reach optimal performance, this value should be adjusted according to the average number of nonzeros | |
| * per rows/columns. | |
| * | |
| * The possible values for the template parameter MapTraits are: | |
| * - \b StdMapTraits: corresponds to std::map. (does not perform very well) | |
| * - \b GnuHashMapTraits: corresponds to __gnu_cxx::hash_map (available only with GCC) | |
| * - \b GoogleDenseHashMapTraits: corresponds to google::dense_hash_map (best efficiency, reasonable memory consumption) | |
| * - \b GoogleSparseHashMapTraits: corresponds to google::sparse_hash_map (best memory consumption, relatively good performance) | |
| * | |
| * The default map implementation depends on the availability, and the preferred order is: | |
| * GoogleSparseHashMapTraits, GnuHashMapTraits, and finally StdMapTraits. | |
| * | |
| * For performance and memory consumption reasons it is highly recommended to use one of | |
| * Google's hash_map implementations. To enable the support for them, you must define | |
| * EIGEN_GOOGLEHASH_SUPPORT. This will include both <google/dense_hash_map> and | |
| * <google/sparse_hash_map> for you. | |
| * | |
| * \see https://github.com/sparsehash/sparsehash | |
| */ | |
| template<typename SparseMatrixType, | |
| template <typename T> class MapTraits = | |
| GoogleDenseHashMapTraits | |
| GnuHashMapTraits | |
| StdMapTraits | |
| ,int OuterPacketBits = 6> | |
| class RandomSetter | |
| { | |
| typedef typename SparseMatrixType::Scalar Scalar; | |
| typedef typename SparseMatrixType::StorageIndex StorageIndex; | |
| struct ScalarWrapper | |
| { | |
| ScalarWrapper() : value(0) {} | |
| Scalar value; | |
| }; | |
| typedef typename MapTraits<ScalarWrapper>::KeyType KeyType; | |
| typedef typename MapTraits<ScalarWrapper>::Type HashMapType; | |
| static const int OuterPacketMask = (1 << OuterPacketBits) - 1; | |
| enum { | |
| SwapStorage = 1 - MapTraits<ScalarWrapper>::IsSorted, | |
| TargetRowMajor = (SparseMatrixType::Flags & RowMajorBit) ? 1 : 0, | |
| SetterRowMajor = SwapStorage ? 1-TargetRowMajor : TargetRowMajor | |
| }; | |
| public: | |
| /** Constructs a random setter object from the sparse matrix \a target | |
| * | |
| * Note that the initial value of \a target are imported. If you want to re-set | |
| * a sparse matrix from scratch, then you must set it to zero first using the | |
| * setZero() function. | |
| */ | |
| inline RandomSetter(SparseMatrixType& target) | |
| : mp_target(&target) | |
| { | |
| const Index outerSize = SwapStorage ? target.innerSize() : target.outerSize(); | |
| const Index innerSize = SwapStorage ? target.outerSize() : target.innerSize(); | |
| m_outerPackets = outerSize >> OuterPacketBits; | |
| if (outerSize&OuterPacketMask) | |
| m_outerPackets += 1; | |
| m_hashmaps = new HashMapType[m_outerPackets]; | |
| // compute number of bits needed to store inner indices | |
| Index aux = innerSize - 1; | |
| m_keyBitsOffset = 0; | |
| while (aux) | |
| { | |
| ++m_keyBitsOffset; | |
| aux = aux >> 1; | |
| } | |
| KeyType ik = (1<<(OuterPacketBits+m_keyBitsOffset)); | |
| for (Index k=0; k<m_outerPackets; ++k) | |
| MapTraits<ScalarWrapper>::setInvalidKey(m_hashmaps[k],ik); | |
| // insert current coeffs | |
| for (Index j=0; j<mp_target->outerSize(); ++j) | |
| for (typename SparseMatrixType::InnerIterator it(*mp_target,j); it; ++it) | |
| (*this)(TargetRowMajor?j:it.index(), TargetRowMajor?it.index():j) = it.value(); | |
| } | |
| /** Destructor updating back the sparse matrix target */ | |
| ~RandomSetter() | |
| { | |
| KeyType keyBitsMask = (1<<m_keyBitsOffset)-1; | |
| if (!SwapStorage) // also means the map is sorted | |
| { | |
| mp_target->setZero(); | |
| mp_target->makeCompressed(); | |
| mp_target->reserve(nonZeros()); | |
| Index prevOuter = -1; | |
| for (Index k=0; k<m_outerPackets; ++k) | |
| { | |
| const Index outerOffset = (1<<OuterPacketBits) * k; | |
| typename HashMapType::iterator end = m_hashmaps[k].end(); | |
| for (typename HashMapType::iterator it = m_hashmaps[k].begin(); it!=end; ++it) | |
| { | |
| const Index outer = (it->first >> m_keyBitsOffset) + outerOffset; | |
| const Index inner = it->first & keyBitsMask; | |
| if (prevOuter!=outer) | |
| { | |
| for (Index j=prevOuter+1;j<=outer;++j) | |
| mp_target->startVec(j); | |
| prevOuter = outer; | |
| } | |
| mp_target->insertBackByOuterInner(outer, inner) = it->second.value; | |
| } | |
| } | |
| mp_target->finalize(); | |
| } | |
| else | |
| { | |
| VectorXi positions(mp_target->outerSize()); | |
| positions.setZero(); | |
| // pass 1 | |
| for (Index k=0; k<m_outerPackets; ++k) | |
| { | |
| typename HashMapType::iterator end = m_hashmaps[k].end(); | |
| for (typename HashMapType::iterator it = m_hashmaps[k].begin(); it!=end; ++it) | |
| { | |
| const Index outer = it->first & keyBitsMask; | |
| ++positions[outer]; | |
| } | |
| } | |
| // prefix sum | |
| StorageIndex count = 0; | |
| for (Index j=0; j<mp_target->outerSize(); ++j) | |
| { | |
| StorageIndex tmp = positions[j]; | |
| mp_target->outerIndexPtr()[j] = count; | |
| positions[j] = count; | |
| count += tmp; | |
| } | |
| mp_target->makeCompressed(); | |
| mp_target->outerIndexPtr()[mp_target->outerSize()] = count; | |
| mp_target->resizeNonZeros(count); | |
| // pass 2 | |
| for (Index k=0; k<m_outerPackets; ++k) | |
| { | |
| const Index outerOffset = (1<<OuterPacketBits) * k; | |
| typename HashMapType::iterator end = m_hashmaps[k].end(); | |
| for (typename HashMapType::iterator it = m_hashmaps[k].begin(); it!=end; ++it) | |
| { | |
| const Index inner = (it->first >> m_keyBitsOffset) + outerOffset; | |
| const Index outer = it->first & keyBitsMask; | |
| // sorted insertion | |
| // Note that we have to deal with at most 2^OuterPacketBits unsorted coefficients, | |
| // moreover those 2^OuterPacketBits coeffs are likely to be sparse, an so only a | |
| // small fraction of them have to be sorted, whence the following simple procedure: | |
| Index posStart = mp_target->outerIndexPtr()[outer]; | |
| Index i = (positions[outer]++) - 1; | |
| while ( (i >= posStart) && (mp_target->innerIndexPtr()[i] > inner) ) | |
| { | |
| mp_target->valuePtr()[i+1] = mp_target->valuePtr()[i]; | |
| mp_target->innerIndexPtr()[i+1] = mp_target->innerIndexPtr()[i]; | |
| --i; | |
| } | |
| mp_target->innerIndexPtr()[i+1] = internal::convert_index<StorageIndex>(inner); | |
| mp_target->valuePtr()[i+1] = it->second.value; | |
| } | |
| } | |
| } | |
| delete[] m_hashmaps; | |
| } | |
| /** \returns a reference to the coefficient at given coordinates \a row, \a col */ | |
| Scalar& operator() (Index row, Index col) | |
| { | |
| const Index outer = SetterRowMajor ? row : col; | |
| const Index inner = SetterRowMajor ? col : row; | |
| const Index outerMajor = outer >> OuterPacketBits; // index of the packet/map | |
| const Index outerMinor = outer & OuterPacketMask; // index of the inner vector in the packet | |
| const KeyType key = internal::convert_index<KeyType>((outerMinor<<m_keyBitsOffset) | inner); | |
| return m_hashmaps[outerMajor][key].value; | |
| } | |
| /** \returns the number of non zero coefficients | |
| * | |
| * \note According to the underlying map/hash_map implementation, | |
| * this function might be quite expensive. | |
| */ | |
| Index nonZeros() const | |
| { | |
| Index nz = 0; | |
| for (Index k=0; k<m_outerPackets; ++k) | |
| nz += static_cast<Index>(m_hashmaps[k].size()); | |
| return nz; | |
| } | |
| protected: | |
| HashMapType* m_hashmaps; | |
| SparseMatrixType* mp_target; | |
| Index m_outerPackets; | |
| unsigned char m_keyBitsOffset; | |
| }; | |
| } // end namespace Eigen | |