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Download code/appendix/human_learning_effects/learning_effect_test.py from afs07fda89sdfas90/data: direct link, hf CLI and curl.
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5.33 kB
| """ | |
| Does human accuracy improve over the 6 questions each Prolific | |
| participant answered? (learning / familiarity effect vs. stagnation) | |
| Position (1..6) is derived from timestamp order within each participant. | |
| Correctness = consensus_correct from the judged human results. | |
| statsmodels is broken against the installed scipy, so the logistic regression | |
| and its cluster-robust (by participant) standard errors are implemented by hand | |
| via IRLS + a sandwich estimator. | |
| """ | |
| import json | |
| import os | |
| import numpy as np | |
| import pandas as pd | |
| from scipy import stats | |
| # ---- Load & join ----------------------------------------------------------- | |
| ROOT = os.path.join(os.path.dirname(os.path.abspath(__file__)), "..", "..") | |
| base = json.load(open(os.path.join(ROOT, "data/occlusion_prolific_human_baseline.json"))) | |
| judged = json.load(open(os.path.join(ROOT, "data/eval_results_human/human_prolific_judged_results.json"))) | |
| ts = {(r["prolific_pid"], r["image_id"]): r["timestamp"] for r in base} | |
| rows = [] | |
| for r in judged: | |
| key = (r["prolific_pid"], r["image_id"]) | |
| if key not in ts or r.get("consensus_correct") is None: | |
| continue | |
| rows.append({ | |
| "pid": r["prolific_pid"], | |
| "image_id": r["image_id"], | |
| "timestamp": ts[key], | |
| "correct": int(bool(r["consensus_correct"])), | |
| "rt_ms": r.get("response_time_ms"), | |
| }) | |
| df = pd.DataFrame(rows) | |
| df["timestamp"] = pd.to_datetime(df["timestamp"]) | |
| df = df.sort_values(["pid", "timestamp"]) | |
| df["position"] = df.groupby("pid").cumcount() + 1 | |
| df = df[df["position"] <= 6] | |
| print(f"Joined responses: {len(df)} | participants: {df['pid'].nunique()}") | |
| # ---- Accuracy by position -------------------------------------------------- | |
| print("\n=== Accuracy by question position ===") | |
| g = df.groupby("position")["correct"].agg(["mean", "sum", "count"]) | |
| g["se"] = np.sqrt(g["mean"] * (1 - g["mean"]) / g["count"]) | |
| for pos, row in g.iterrows(): | |
| lo = row["mean"] - 1.96 * row["se"] | |
| hi = row["mean"] + 1.96 * row["se"] | |
| print(f" Q{pos}: acc={row['mean']:.3f} ({int(row['sum'])}/{int(row['count'])}) " | |
| f"95% CI [{lo:.3f}, {hi:.3f}]") | |
| # ---- Test 1: linear trend -------------------------------------------------- | |
| print("\n=== Test 1: Linear trend across positions ===") | |
| r_pb, p_pb = stats.pointbiserialr(df["correct"], df["position"]) | |
| print(f" Point-biserial r(correct, position) = {r_pb:.4f}, p = {p_pb:.4f}") | |
| counts = df.groupby("position")["correct"].agg(["sum", "count"]) | |
| n_i = counts["count"].values.astype(float) | |
| x_i = counts.index.values.astype(float) | |
| p1_i = counts["sum"].values.astype(float) | |
| N = n_i.sum(); R = p1_i.sum(); pbar = R / N | |
| xbar = (n_i * x_i).sum() / N | |
| num = ((p1_i - n_i * pbar) * (x_i - xbar)).sum() | |
| den = pbar * (1 - pbar) * (n_i * (x_i - xbar) ** 2).sum() | |
| z_ca = num / np.sqrt(den) | |
| p_ca = 2 * (1 - stats.norm.cdf(abs(z_ca))) | |
| print(f" Cochran-Armitage trend: z = {z_ca:.3f}, p = {p_ca:.4f}") | |
| # Q1 vs Q6 two-proportion z-test (first vs last) | |
| def two_prop_z(s1, n1, s2, n2): | |
| p1, p2 = s1 / n1, s2 / n2 | |
| pp = (s1 + s2) / (n1 + n2) | |
| se = np.sqrt(pp * (1 - pp) * (1 / n1 + 1 / n2)) | |
| z = (p1 - p2) / se | |
| return z, 2 * (1 - stats.norm.cdf(abs(z))) | |
| z16, p16 = two_prop_z(counts.loc[1, "sum"], counts.loc[1, "count"], | |
| counts.loc[6, "sum"], counts.loc[6, "count"]) | |
| print(f" Q1 vs Q6 two-proportion z = {z16:.3f}, p = {p16:.4f} " | |
| f"(Q1={g.loc[1,'mean']:.3f} vs Q6={g.loc[6,'mean']:.3f})") | |
| # ---- Test 2: logistic regression, cluster-robust SE by participant --------- | |
| print("\n=== Test 2: Logistic correct ~ position (cluster-robust SE by pid) ===") | |
| def logit_irls(X, y, iters=100, tol=1e-10): | |
| beta = np.zeros(X.shape[1]) | |
| for _ in range(iters): | |
| eta = X @ beta | |
| mu = 1 / (1 + np.exp(-eta)) | |
| W = mu * (1 - mu) | |
| WX = X * W[:, None] | |
| H = X.T @ WX | |
| grad = X.T @ (y - mu) | |
| step = np.linalg.solve(H, grad) | |
| beta += step | |
| if np.max(np.abs(step)) < tol: | |
| break | |
| return beta, mu | |
| y = df["correct"].values.astype(float) | |
| X = np.column_stack([np.ones(len(df)), df["position"].values.astype(float)]) | |
| beta, mu = logit_irls(X, y) | |
| # cluster-robust (sandwich) covariance, clustered by participant | |
| W = mu * (1 - mu) | |
| bread = np.linalg.inv((X * W[:, None]).T @ X) | |
| u = X * (y - mu)[:, None] # score contributions | |
| meat = np.zeros((X.shape[1], X.shape[1])) | |
| pid_arr = df["pid"].values | |
| for pid in np.unique(pid_arr): | |
| idx = pid_arr == pid | |
| ug = u[idx].sum(axis=0) | |
| meat += np.outer(ug, ug) | |
| cov = bread @ meat @ bread | |
| se = np.sqrt(np.diag(cov)) | |
| z = beta / se | |
| pvals = 2 * (1 - stats.norm.cdf(np.abs(z))) | |
| print(f" intercept: coef={beta[0]:.4f} se={se[0]:.4f}") | |
| print(f" position : coef={beta[1]:.4f} se={se[1]:.4f} OR={np.exp(beta[1]):.4f} " | |
| f"z={z[1]:.3f} p={pvals[1]:.4f}") | |
| print(f" -> OR>1 = improvement over questions; OR≈1 & p>.05 = stagnation") | |
| # ---- Secondary: response time by position ---------------------------------- | |
| print("\n=== Secondary: response time by position (speed-up = familiarity) ===") | |
| rtdf = df.dropna(subset=["rt_ms"]) | |
| for pos, v in rtdf.groupby("position")["rt_ms"].median().items(): | |
| print(f" Q{pos}: median RT = {v/1000:.1f}s") | |
| r_rt, p_rt = stats.spearmanr(rtdf["position"], rtdf["rt_ms"]) | |
| print(f" Spearman(position, RT) = {r_rt:.4f}, p = {p_rt:.4g}") | |