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docs(dataset): identify mNeonGreen-tagged constructs
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docs(dataset): remove companion repository references
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docs(dataset): align README and Croissant metadata
Runxi Shen
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docs(dataset): remove venue-specific submission claims
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feat(data): replace SubCell fine-tuned features with allele RYBG-v2
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feat(data): add frozen MorphEm representation to MisLocus
Runxi Shen
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fix(crops): canonicalize B7/B8 crop-tarball allele dirs (WTPMP22 merged into PMP22, ALKT1151M->ALK_Thr1151Met); refresh README + Croissant
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fix(representations): canonicalize gene names in B7/B8 (WTPMP22->PMP22, ALKT1151M->ALK_Thr1151Met)
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fix(manifest): canonicalize WTPMP22->PMP22 and ALKT1151M->ALK_Thr1151Met in B7/B8 manifests
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chore(scope): drop representations/subcell_portable_rbg_vit/2024_12_09_Batch_12
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chore(scope): drop representations/subcell_portable_rbg_vit/2024_12_09_Batch_11
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chore(scope): drop representations/subcell_portable_rbg_mae/2024_12_09_Batch_12
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chore(scope): drop representations/subcell_portable_rbg_mae/2024_12_09_Batch_11
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chore(scope): drop representations/subcell_finetuned_vit/2024_12_09_Batch_12
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chore(scope): drop representations/subcell_finetuned_vit/2024_12_09_Batch_11
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chore(scope): drop representations/subcell_finetuned_mae/2024_12_09_Batch_12
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chore(scope): drop representations/subcell_finetuned_mae/2024_12_09_Batch_11
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chore(scope): drop representations/cytoself/2024_12_09_Batch_12
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chore(scope): drop representations/cytoself/2024_12_09_Batch_11
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chore(scope): drop representations/cellprofiler/2024_12_09_Batch_12
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chore(scope): drop representations/cellprofiler/2024_12_09_Batch_11
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Update README.md
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fix(croissant): add isBasedOn (source dataset) + 4 provenance RAI fields (dataCollectionType, dataCollectionRawData, dataPreprocessingProtocol, dataAnnotationProtocol)
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fix(croissant): add 4 NeurIPS-required RAI fields (dataBiases, dataUseCases, dataSocialImpact, hasSyntheticData)
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fix(croissant): correct license to CC-BY-4.0 + replace HF boilerplate description
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feat(croissant): v1.1.0 with FileSet distribution + SHA256 for FileObjects
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docs: document metadata/allele_inventory.parquet location
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refactor: remove full_allele_collection.parquet (replaced by metadata/allele_inventory.parquet, filtered to 6 release batches)
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feat(metadata): add allele_inventory.parquet (1532 variants from B7/B8/B13-B16, ClinVar-annotated)
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docs: add representations/ section (6 reps x 8 batches features)
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chore: phase4 upload
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docs: final release status (all 6 batches uploaded)
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chore: phase3 upload
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docs: update release status (Phase 2: B13+B14 added)
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chore: phase2 upload
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chore: phase1 upload
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Upload full_allele_collection.parquet with huggingface_hub
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initial commit