text_prompt
stringlengths
157
13.1k
code_prompt
stringlengths
7
19.8k
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cudaMemcpy_htod(dst, src, count): """ Copy memory from host to device. Copy data from host memory to device memory. Parameters dst : ctypes pointer Device me...
status = _libcudart.cudaMemcpy(dst, src, ctypes.c_size_t(count), cudaMemcpyHostToDevice) cudaCheckStatus(status)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cudaMemcpy_dtoh(dst, src, count): """ Copy memory from device to host. Copy data from device memory to host memory. Parameters dst : ctypes pointer Host memo...
status = _libcudart.cudaMemcpy(dst, src, ctypes.c_size_t(count), cudaMemcpyDeviceToHost) cudaCheckStatus(status)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cudaMemGetInfo(): """ Return the amount of free and total device memory. Returns ------- free : long Free memory in bytes. total : long Total memory in bytes...
free = ctypes.c_size_t() total = ctypes.c_size_t() status = _libcudart.cudaMemGetInfo(ctypes.byref(free), ctypes.byref(total)) cudaCheckStatus(status) return free.value, total.value
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cudaGetDevice(): """ Get current CUDA device. Return the identifying number of the device currently used to process CUDA operations. Returns ------- dev : in...
dev = ctypes.c_int() status = _libcudart.cudaGetDevice(ctypes.byref(dev)) cudaCheckStatus(status) return dev.value
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cudaDriverGetVersion(): """ Get installed CUDA driver version. Return the version of the installed CUDA driver as an integer. If no driver is detected, 0 is ...
version = ctypes.c_int() status = _libcudart.cudaDriverGetVersion(ctypes.byref(version)) cudaCheckStatus(status) return version.value
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cudaPointerGetAttributes(ptr): """ Get memory pointer attributes. Returns attributes of the specified pointer. Parameters ptr : ctypes pointer Memory pointer...
attributes = cudaPointerAttributes() status = \ _libcudart.cudaPointerGetAttributes(ctypes.byref(attributes), ptr) cudaCheckStatus(status) return attributes.memoryType, attributes.device
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def eval(thunk, env): """Evaluate a thunk in an environment. Will defer the actual evaluation to the thunk itself, but adds two things: caching and recursion det...
key = Activation.key(thunk, env) if Activation.activated(key): raise exceptions.RecursionError('Reference cycle') with Activation(key): return eval_cache.get(key, thunk.eval, env)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_node(self, key): """Delegate to our current "value provider" for the node belonging to this key."""
if key in self.names: return self.values.get_member_node(key) if hasattr(self.values, 'get_member_node') else None return self.parent.get_node(key)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def reset(cls): """ Reset to default settings """
cls.debug = False cls.disabled = False cls.overwrite = False cls.playback_only = False cls.recv_timeout = 5 cls.recv_endmarkers = [] cls.recv_size = None
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def to_python(value, seen=None): """Reify values to their Python equivalents. Does recursion detection, failing when that happens. """
seen = seen or set() if isinstance(value, framework.TupleLike): if value.ident in seen: raise RecursionException('to_python: infinite recursion while evaluating %r' % value) new_seen = seen.union([value.ident]) return {k: to_python(value[k], seen=new_seen) for k in value.exportable_keys()} if i...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def walk(value, walker, path=None, seen=None): """Walks the _evaluated_ tree of the given GCL tuple. The appropriate methods of walker will be invoked for every ...
seen = seen or set() path = path or [] # Recursion if id(value) in seen: walker.visitRecursion(path) return # Error if isinstance(value, Exception): walker.visitError(path, value) return # List if isinstance(value, list): # Not actually a tuple, but okay recurse = walker.ente...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def fingerprint(value): """Return a hash value that uniquely identifies the GCL value."""
h = hashlib.sha256() _digest(value, h) return h.digest().encode('hex')
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def compact_error(err): """Return the the last 2 error messages from an error stack. These error messages turns out to be the most descriptive. """
def err2(e): if isinstance(e, exceptions.EvaluationError) and e.inner: message, i = err2(e.inner) if i == 1: return ', '.join([e.args[0], str(e.inner)]), i + 1 else: return message, i + 1 else: return str(e), 1 return err2(err)[0]
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def backprop(self, input_data, targets, cache=None): """ Backpropagate through the logistic layer. **Parameters:** input_data : ``GPUArray`` Inpute data to compu...
if cache is not None: activations = cache else: activations = self.feed_forward(input_data, prediction=False) if activations.shape != targets.shape: raise ValueError('Activations (shape = %s) and targets (shape = %s) are different sizes' % ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cross_entropy_error(self, input_data, targets, average=True, cache=None, prediction=False): """ Return the cross entropy error """
if cache is not None: activations = cache else: activations = \ self.feed_forward(input_data, prediction=prediction) loss = cross_entropy_logistic(activations, targets) if average: loss /= targets.shape[0] # assert np.isfinite(loss) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def stylize_comment_block(lines): """Parse comment lines and make subsequent indented lines into a code block block. """
normal, sep, in_code = range(3) state = normal for line in lines: indented = line.startswith(' ') empty_line = line.strip() == '' if state == normal and empty_line: state = sep elif state in [sep, normal] and indented: yield '' if indented: yield '.. code-block:: jav...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def sort_members(tup, names): """Return two pairs of members, scalar and tuple members. The scalars will be sorted s.t. the unbound members are at the top. """
scalars, tuples = partition(lambda x: not is_tuple_node(tup.member[x].value), names) unbound, bound = partition(lambda x: tup.member[x].value.is_unbound(), scalars) return usorted(unbound) + usorted(bound), usorted(tuples)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def resolve_file(fname, paths): """Resolve filename relatively against one of the given paths, if possible."""
fpath = path.abspath(fname) for p in paths: spath = path.abspath(p) if fpath.startswith(spath): return fpath[len(spath) + 1:] return fname
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def generate(self): """Generate a list of strings representing the table in RST format."""
header = ' '.join('=' * self.width[i] for i in range(self.w)) lines = [ ' '.join(row[i].ljust(self.width[i]) for i in range(self.w)) for row in self.rows] return [header] + lines + [header]
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def select(self, model): """Select nodes according to the input selector. This can ALWAYS return multiple root elements. """
res = [] def doSelect(value, pre, remaining): if not remaining: res.append((pre, value)) else: # For the other selectors to work, value must be a Tuple or a list at this point. if not is_tuple(value) and not isinstance(value, list): return qhead, qtail = ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def deep(self): """Return a deep dict of the values selected. The leaf values may still be gcl Tuples. Use util.to_python() if you want to reify everything to re...
self.lists = {} ret = {} for path, value in self.paths_values(): self.recursiveSet(ret, path, value) self.removeMissingValuesFromLists() return ret
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def ldGet(self, what, key): """List-aware get."""
if isListKey(key): return what[listKeyIndex(key)] else: return what[key]
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def find_recursive_dependency(self): """Return a list of nodes that have a recursive dependency."""
nodes_on_path = [] def helper(nodes): for node in nodes: cycle = node in nodes_on_path nodes_on_path.append(node) if cycle or helper(self.deps.get(node, [])): return True nodes_on_path.pop() return False helper(self.unordered) return nodes_on_path
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def enterTuple(self, tuple, path): """Called for every tuple. If this returns False, the elements of the tuple will not be recursed over and leaveTuple() will no...
if skip_name(path): return False node = Node(path, tuple) if self.condition.matches(node): self.unordered.append(node) return False return True
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def convertAndMake(converter, handler): """Convert with location."""
def convertAction(loc, value): return handler(loc, converter(value)) return convertAction
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def mkApplications(location, *atoms): """Make a sequence of applications from a list of tokens. atoms is a list of atoms, which will be handled left-associativel...
atoms = list(atoms) while len(atoms) > 1: atoms[0:2] = [Application(location, atoms[0], atoms[1])] # Nothing left to apply return atoms[0]
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def call_fn(fn, arglist, env): """Call a function, respecting all the various types of functions that exist."""
if isinstance(fn, framework.LazyFunction): # The following looks complicated, but this is necessary because you can't # construct closures over the loop variable directly. thunks = [(lambda thunk: lambda: framework.eval(thunk, env))(th) for th in arglist.values] return fn(*thunks) evaled_args = fr...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def schema_spec_from_tuple(tup): """Return the schema spec from a run-time tuple."""
if hasattr(tup, 'get_schema_spec'): # Tuples have a TupleSchema field that contains a model of the schema return schema.from_spec({ 'fields': TupleSchemaAccess(tup), 'required': tup.get_required_fields()}) return schema.AnySchema()
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def make_schema_from(value, env): """Make a Schema object from the given spec. The input and output types of this function are super unclear, and are held togeth...
# So this thing may not need to evaluate anything[0] if isinstance(value, framework.Thunk): value = framework.eval(value, env) # We're a bit messy. In general, this has evaluated to a Schema object, but not necessarily: # for tuples and lists, we still need to treat the objects as specs. if isinstance(...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def bracketedList(l, r, sep, expr, allow_missing_close=False): """Parse bracketed list. Empty list is possible, as is a trailing separator. """
# We may need to backtrack for lists, because of list comprehension, but not for # any of the other lists strict = l != '[' closer = sym(r) if not allow_missing_close else p.Optional(sym(r)) if strict: return sym(l) - listMembers(sep, expr) - closer else: return sym(l) + listMembers(sep, expr) + cl...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def unquote(s): """Unquote the indicated string."""
# Ignore the left- and rightmost chars (which should be quotes). # Use the Python engine to decode the escape sequence i, N = 1, len(s) - 1 ret = [] while i < N: if s[i] == '\\' and i < N - 1: ret.append(UNQUOTE_MAP.get(s[i+1], s[i+1])) i += 2 else: ret.append(s[i]) i += 1 r...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def pattern(name, pattern): """Function to put a name on a pyparsing pattern. Just for ease of debugging/tracing parse errors. """
pattern.setName(name) astracing.maybe_trace(pattern) return pattern
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def find_tokens(self, q): """Find all AST nodes at the given filename, line and column."""
found_me = [] if hasattr(self, 'location'): if self.location.contains(q): found_me = [self] elif self._found_by(q): found_me = [self] cs = [n.find_tokens(q) for n in self._children()] return found_me + list(itertools.chain(*cs))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _make_tuple(self, env): """Instantiate the Tuple based on this TupleNode."""
t = runtime.Tuple(self, env, dict2tuple) # A tuple also provides its own schema spec schema = schema_spec_from_tuple(t) t.attach_schema(schema) return t
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def applyTuple(self, tuple, right, env): """Apply a tuple to something else."""
if len(right) != 1: raise exceptions.EvaluationError('Tuple (%r) can only be applied to one argument, got %r' % (self.left, self.right)) right = right[0] return tuple(right)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def applyIndex(self, lst, right): """Apply a list to something else."""
if len(right) != 1: raise exceptions.EvaluationError('%r can only be applied to one argument, got %r' % (self.left, self.right)) right = right[0] if isinstance(right, int): return lst[right] raise exceptions.EvaluationError("Can't apply %r to argument (%r): integer expected, got %r" % (se...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def class_error(self, input_data, targets, average=True, cache=None, prediction=False): """ Return the classification error rate """
if cache is not None: activations = cache else: activations = \ self.feed_forward(input_data, prediction=prediction) targets = targets.get().argmax(1) class_error = np.sum(activations.get().argmax(1) != targets) if average: class_error = ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def kl_error(self, input_data, targets, average=True, cache=None, prediction=True): """ The KL divergence error """
if cache is not None: activations = cache else: activations = \ self.feed_forward(input_data, prediction=prediction) targets_non_nan = gpuarray.empty_like(targets) nan_to_zeros(targets, targets_non_nan) kl_error = gpuarray.sum(targets_non_...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description:
def make_tempfile(data=None): "Create a temp file, write our PID into it." with tempfile.NamedTemporaryFile(mode='w', delete=False) as temp: temp.write(six.text_type(data if data is not None else os.getpid())) return temp.name
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def parameters(self): """Return a list where each element contains the parameters for a task. """
parameters = [] for task in self.tasks: parameters.extend(task.parameters) return parameters
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def parameters(self, value): """Update the parameters. ``value`` must be a list/tuple of length ``MultitaskTopLayer.n_tasks``, each element of which must have th...
assert len(value) == self.n_parameters i = 0 for task in self.tasks: task.parameters = value[i:i + task.n_parameters] i += task.n_parameters
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def feed_forward(self, input_data, prediction=False): """Call ``feed_forward`` for each task and combine the activations. Passes ``input_data`` to all tasks and ...
activations = [] for task in self.tasks: activations_task = task.feed_forward(input_data, prediction) activations.append(activations_task) return activations
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def backprop(self, input_data, targets, cache=None): """Compute gradients for each task and combine the results. **Parameters:** input_data : ``GPUArray`` Inpute...
df_input = gpuarray.zeros_like(input_data) if cache is None: cache = self.n_tasks * [None] gradients = [] for targets_task, cache_task, task, task_weight in \ izip(targets, cache, self.tasks, self.task_weights): gradients_task, df_input_task = \ t...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cross_entropy_error(self, input_data, targets, average=True, cache=None, prediction=False, sum_errors=True): """ Computes the cross-entropy error for all tas...
loss = [] if cache is None: cache = self.n_tasks * [None] for targets_task, cache_task, task in \ izip(targets, cache, self.tasks): loss.append(task.cross_entropy_error( input_data, targets_task, average=average, cache=cache_...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def architecture(self): """Returns a dictionary describing the architecture of the layer."""
arch = {'class': self.__class__, 'n_in': self.n_in, 'n_units': self.n_units, 'activation_function': self.activation_function if hasattr(self, 'activation_function') else None} return arch
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasCreate(): """ Initialize CUBLAS. Initializes CUBLAS and creates a handle to a structure holding the CUBLAS library context. Returns ------- handle : vo...
handle = ctypes.c_void_p() status = _libcublas.cublasCreate_v2(ctypes.byref(handle)) cublasCheckStatus(status) return handle.value
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasDestroy(handle): """ Release CUBLAS resources. Releases hardware resources used by CUBLAS. Parameters handle : void_p CUBLAS context. """
status = _libcublas.cublasDestroy_v2(ctypes.c_void_p(handle)) cublasCheckStatus(status)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasGetVersion(handle): """ Get CUBLAS version. Returns version number of installed CUBLAS libraries. Parameters handle : void_p CUBLAS context. Returns --...
version = ctypes.c_int() status = _libcublas.cublasGetVersion_v2(handle, ctypes.byref(version)) cublasCheckStatus(status) return version.value
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasGetStream(handle): """ Set current CUBLAS library stream. Parameters handle : void_p CUBLAS context. Returns ------- id : int Stream ID. """
id = ctypes.c_int() status = _libcublas.cublasGetStream_v2(handle, ctypes.byref(id)) cublasCheckStatus(status) return id.value
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasSgbmv(handle, trans, m, n, kl, ku, alpha, A, lda, x, incx, beta, y, incy): """ Matrix-vector product for real general banded matrix. """
status = _libcublas.cublasSgbmv_v2(handle, trans, m, n, kl, ku, ctypes.byref(ctypes.c_float(alpha)), int(A), lda, int(x), incx, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasStbmv(handle, uplo, trans, diag, n, k, A, lda, x, incx): """ Matrix-vector product for real triangular-banded matrix. """
status = _libcublas.cublasStbmv_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], n, k, int(A), lda, int(x), incx) cublas...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasCtpsv(handle, uplo, trans, diag, n, AP, x, incx): """ Solve complex triangular-packed system with one right-hand side. """
status = _libcublas.cublasCtpsv_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], n, int(AP), int(x), incx) cublasCheckSta...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasZtpsv(handle, uplo, trans, diag, n, AP, x, incx): """ Solve complex triangular-packed system with one right-hand size. """
status = _libcublas.cublasZtpsv_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], n, int(AP), int(x), incx) cublasCheckSt...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasCtrmv(handle, uplo, trans, diag, n, A, lda, x, incx): """ Matrix-vector product for complex triangular matrix. """
status = _libcublas.cublasCtrmv_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], n, int(A), lda, int(x), incx) cublasChe...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasDtrmv(handle, uplo, trans, diag, n, A, lda, x, inx): """ Matrix-vector product for real triangular matrix. """
status = _libcublas.cublasDtrmv_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], n, int(A), lda, int(x), inx) cublasCheckSta...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasZgemm(handle, transa, transb, m, n, k, alpha, A, lda, B, ldb, beta, C, ldc): """ Matrix-matrix product for complex general matrix. """
status = _libcublas.cublasZgemm_v2(handle, _CUBLAS_OP[transa], _CUBLAS_OP[transb], m, n, k, ctypes.byref(cuda.cuDoubleComplex(alpha.real, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasSsymm(handle, side, uplo, m, n, alpha, A, lda, B, ldb, beta, C, ldc): """ Matrix-matrix product for symmetric matrix. """
status = _libcublas.cublasSsymm_v2(handle, _CUBLAS_SIDE_MODE[side], _CUBLAS_FILL_MODE[uplo], m, n, ctypes.byref(ctypes.c_float(alpha)), int(A), lda, int...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasDsymm(handle, side, uplo, m, n, alpha, A, lda, B, ldb, beta, C, ldc): """ Matrix-matrix product for real symmetric matrix. """
status = _libcublas.cublasDsymm_v2(handle, _CUBLAS_SIDE_MODE[side], _CUBLAS_FILL_MODE[uplo], m, n, ctypes.byref(ctypes.c_double(alpha)), int(A), lda, int...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasCsymm(handle, side, uplo, m, n, alpha, A, lda, B, ldb, beta, C, ldc): """ Matrix-matrix product for complex symmetric matrix. """
status = _libcublas.cublasCsymm_v2(handle, _CUBLAS_SIDE_MODE[side], _CUBLAS_FILL_MODE[uplo], m, n, ctypes.byref(cuda.cuFloatComplex(alpha.real, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasZsyrk(handle, uplo, trans, n, k, alpha, A, lda, beta, C, ldc): """ Rank-k operation on complex symmetric matrix. """
status = _libcublas.cublasZsyrk_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], n, k, ctypes.byref(cuda.cuDoubleComplex(alpha.real, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasStrmm(handle, side, uplo, trans, diag, m, n, alpha, A, lda, B, ldb, C, ldc): """ Matrix-matrix product for real triangular matrix. """
status = _libcublas.cublasStrmm_v2(handle, _CUBLAS_SIDE_MODE[side], _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasZtrmm(handle, side, uplo, trans, diag, m, n, alpha, A, lda, B, ldb, C, ldc): """ Matrix-matrix product for complex triangular matrix. """
status = _libcublas.cublasZtrmm_v2(handle, _CUBLAS_SIDE_MODE[side], _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasZtrsm(handle, side, uplo, transa, diag, m, n, alpha, A, lda, B, ldb): """ Solve complex triangular system with multiple right-hand sides. """
status = _libcublas.cublasZtrsm_v2(handle, _CUBLAS_SIDE_MODE[side], _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasZherk(handle, uplo, trans, n, k, alpha, A, lda, beta, C, ldc): """ Rank-k operation on Hermitian matrix. """
status = _libcublas.cublasZherk_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], n, k, ctypes.byref(ctypes.c_double(alpha)), int(A), lda, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasCher2k(handle, uplo, trans, n, k, alpha, A, lda, B, ldb, beta, C, ldc): """ Rank-2k operation on Hermitian matrix. """
status = _libcublas.cublasCher2k_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], n, k, ctypes.byref(cuda.cuFloatComplex(alpha.real, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def cublasSdgmm(handle, mode, m, n, A, lda, x, incx, C, ldc): """ Matrix-diagonal matrix product for real general matrix. """
status = _libcublas.cublasSdgmm(handle, _CUBLAS_SIDE[mode], m, n, int(A), lda, int(x), incx, int(C), ldc) cublasCheckStatus(stat...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load_EROS_lc(filename='lm0010n22323.time'): """ Read an EROS light curve and return its data. Parameters filename : str, optional A light-curve filename. Ret...
module_path = dirname(__file__) file_path = join(module_path, 'lightcurves', filename) data = np.loadtxt(file_path) date = data[:, 0] mag = data[:, 1] err = data[:, 2] return date, mag, err
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load_rf_model(): """ Return the UPSILoN random forests classifier. The classifier is trained using OGLE and EROS periodic variables (Kim et al. 2015). Return...
import gzip try: import cPickle as pickle except: import pickle module_path = dirname(__file__) file_path = join(module_path, 'models/rf.model.sub.github.gz') # For Python 3. if sys.version_info.major >= 3: clf = pickle.load(gzip.open(file_path, 'rb'), encoding='l...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def sample_dropout_mask(x, dropout_probability=.5, columns=None, stream=None, target=None, dropout_mask=None, dropout_prob_array=None): """ Samples a dropout mas...
assert x.flags.c_contiguous if columns is not None: assert len(columns) == 2 x_tmp = x x = extract_columns(x, columns[0], columns[1]) shape = x.shape if dropout_prob_array is None: dropout_prob_array = gpuarray.empty(shape, x.dtype, allocator=memory_pool.allocate) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def read(filename, loader=None, implicit_tuple=True, allow_errors=False): """Load but don't evaluate a GCL expression from a file."""
with open(filename, 'r') as f: return reads(f.read(), filename=filename, loader=loader, implicit_tuple=implicit_tuple, allow_errors=allow_errors)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def loads(s, filename=None, loader=None, implicit_tuple=True, env={}, schema=None): """Load and evaluate a GCL expression from a string."""
ast = reads(s, filename=filename, loader=loader, implicit_tuple=implicit_tuple) if not isinstance(env, framework.Environment): # For backwards compatibility we accept an Environment object. Otherwise assume it's a dict # whose bindings will add/overwrite the default bindings. env = framework.Environmen...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load(filename, loader=None, implicit_tuple=True, env={}, schema=None): """Load and evaluate a GCL expression from a file."""
with open(filename, 'r') as f: return loads(f.read(), filename=filename, loader=loader, implicit_tuple=implicit_tuple, env=env, schema=schema)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def linear_scheduler_up(init_value, target_value, duration): """ Increases linearly and then stays flat """
value = init_value t = 0 while True: yield value t += 1 if t < duration: value = init_value + t * (target_value - init_value) / duration else: value = target_value
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def linear_scheduler_up_down(init_value, target_value, final_value, duration_up, t_decrease, duration_down): """ Increases linearly to target_value, stays at tar...
value = init_value t = 0 while True: yield value t += 1 if t < duration_up: value = init_value + t * (target_value - init_value) / \ float(duration_up) elif t > t_decrease: value = target_value - (t - t_decrease) * \ ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load(stream, overrides=None, **kwargs): """ Loads a YAML configuration from a string or file-like object. Parameters stream : str or object Either a string c...
global is_initialized if not is_initialized: initialize() if isinstance(stream, basestring): string = stream else: string = '\n'.join(stream.readlines()) # processed_string = preprocess(string) proxy_graph = yaml.load(string, **kwargs) from . import init ini...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load_path(path, overrides=None, **kwargs): """ Convenience function for loading a YAML configuration from a file. Parameters path : str The path to the file ...
f = open(path, 'r') content = ''.join(f.readlines()) f.close() if not isinstance(content, str): raise AssertionError("Expected content to be of type str but it is "+str(type(content))) return load(content, **kwargs)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def handle_overrides(graph, overrides): """ Handle any overrides for this model configuration. Parameters graph : dict or object A dictionary (or an ObjectProxy)...
for key in overrides: levels = key.split('.') part = graph for lvl in levels[:-1]: try: part = part[lvl] except KeyError: raise KeyError("'%s' override failed at '%s'", (key, lvl)) try: part[levels[-1]] = overrides[...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def instantiate_all(graph): """ Instantiate all ObjectProxy objects in a nested hierarchy. Parameters graph : dict or object A dictionary (or an ObjectProxy) con...
def should_instantiate(obj): classes = [ObjectProxy, dict, list] return True in [isinstance(obj, cls) for cls in classes] if not isinstance(graph, list): for key in graph: if should_instantiate(graph[key]): graph[key] = instantiate_all(graph[key]) i...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def multi_constructor(loader, tag_suffix, node): """ Constructor function passed to PyYAML telling it how to construct objects from argument descriptions. See Py...
yaml_src = yaml.serialize(node) mapping = loader.construct_mapping(node) if '.' not in tag_suffix: classname = tag_suffix rval = ObjectProxy(classname, mapping, yaml_src) else: classname = try_to_import(tag_suffix) rval = ObjectProxy(classname, mapping, yaml_src) re...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def multi_constructor_pkl(loader, tag_suffix, node): """ Constructor function passed to PyYAML telling it how to load objects from paths to .pkl files. See PyYAM...
mapping = loader.construct_yaml_str(node) if tag_suffix != "" and tag_suffix != u"": raise AssertionError('Expected tag_suffix to be "" but it is "'+tag_suffix+'"') rval = ObjectProxy(None, {}, yaml.serialize(node)) rval.instance = serial.load(mapping) return rval
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def instantiate(self): """ Instantiate this object with the supplied parameters in `self.kwds`, or if already instantiated, return the cached instance. """
if self.instance is None: self.instance = checked_call(self.cls, self.kwds) #endif try: self.instance.yaml_src = self.yaml_src except AttributeError: pass return self.instance
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def feed_forward(self, input_data, prediction=False): """Propagate forward through the layer. **Parameters:** input_data : ``GPUArray`` Inpute data to compute ac...
if input_data.shape[1] != self.W.shape[0]: raise ValueError('Number of outputs from previous layer (%d) ' 'does not match number of inputs to this layer (%d)' % (input_data.shape[1], self.W.shape[0])) activations = linalg.dot(input...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_no_validate(self, key): """Return an item without validating the schema."""
x, env = self.get_thunk_env(key) # Check if this is a Thunk that needs to be lazily evaluated before we # return it. if isinstance(x, framework.Thunk): x = framework.eval(x, env) return x
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def env(self, current_scope): """Return an environment that will look up in current_scope for keys in this tuple, and the parent env otherwise. """
return self.__env_cache.get( current_scope.ident, framework.Environment, current_scope, names=self.keys(), parent=framework.Environment({'self': current_scope}, parent=self.__parent_env))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_thunk_env(self, k): """Return the thunk AND environment for validating it in for the given key. There might be different envs in case the thunk comes fro...
if k not in self.__items: raise exceptions.EvaluationError('Unknown key: %r in tuple %r' % (k, self)) x = self.__items[k] env = self.env(self) # Bind this to the tuple's parent environment if isinstance(x, framework.BindableThunk): return x.bind(self.__parent_env), env return x, e...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_schema_spec(self, key): """Return the evaluated schema expression from a subkey."""
member_node = self._ast_node.member.get(key, None) if not member_node: return schema.AnySchema() s = framework.eval(member_node.member_schema, self.env(self)) if not isinstance(s, schema.Schema): raise ValueError('Node %r with schema node %r should evaluate to Schema, got %r' % (member_nod...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_required_fields(self): """Return the names of fields that are required according to the schema."""
return [m.name for m in self._ast_node.members if m.member_schema.required]
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_member_node(self, key): """Return the AST node for the given member, from the first tuple that serves it."""
for tup, _ in self.lookups: if key in tup: return tup.get_member_node(key) raise RuntimeError('Key not found in composite tuple: %r' % key)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def exportable_keys(self): """Return a list of keys that are exportable from this tuple. Returns all keys that are not private in any of the tuples. """
keys = collections.defaultdict(list) for tup in self._tuples: for key, private in tup._keys_and_privacy().items(): keys[key].append(private) return [k for k, ps in keys.items() if not any(ps)]
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def check_call_arguments(to_call, kwargs): """ Check the call signature against a dictionary of proposed arguments, raising an informative exception in the case ...
if 'self' in kwargs.keys(): raise TypeError("Your dictionary includes an entry for 'self', " "which is just asking for trouble") orig_to_call = getattr(to_call, '__name__', str(to_call)) if not isinstance(to_call, types.FunctionType): if hasattr(to_call, '__init__')...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def predict(rf_model, features): """ Return label and probability estimated. Parameters rf_model : sklearn.ensemble.RandomForestClassifier The UPSILoN random for...
import numpy as np from upsilon.extract_features.feature_set import get_feature_set feature_set = get_feature_set() # Grab only necessary features. cols = [feature for feature in features if feature in feature_set] cols = sorted(cols) filtered_features = [] for i in range(len(cols)):...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def compose_all(tups): """Compose all given tuples together."""
from . import ast # I weep for humanity return functools.reduce(lambda x, y: x.compose(y), map(ast.make_tuple, tups), ast.make_tuple({}))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def extract_dark(prihdr, scihdu): """Extract superdark data from ``DARKFILE`` or ``DRKCFILE``. Parameters prihdr : obj FITS primary header HDU. scihdu : obj Exte...
if prihdr.get('PCTECORR', 'OMIT') == 'COMPLETE': darkfile = prihdr.get('DRKCFILE', 'N/A') else: darkfile = prihdr.get('DARKFILE', 'N/A') if darkfile == 'N/A': return None darkfile = from_irafpath(darkfile) ampstring = prihdr['CCDAMP'] # Calculate DARKTIME exptime ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def extract_flash(prihdr, scihdu): """Extract postflash data from ``FLSHFILE``. Parameters prihdr : obj FITS primary header HDU. scihdu : obj Extension HDU of th...
flshfile = prihdr.get('FLSHFILE', 'N/A') flashsta = prihdr.get('FLASHSTA', 'N/A') flashdur = prihdr.get('FLASHDUR', 0.0) if flshfile == 'N/A' or flashdur <= 0: return None if flashsta != 'SUCCESSFUL': warnings.warn('Flash status is {0}'.format(flashsta), Astr...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def extract_flatfield(prihdr, scihdu): """Extract flatfield data from ``PFLTFILE``. Parameters prihdr : obj FITS primary header HDU. scihdu : obj Extension HDU o...
for ff in ['DFLTFILE', 'LFLTFILE']: vv = prihdr.get(ff, 'N/A') if vv != 'N/A': warnings.warn('{0}={1} is not accounted for'.format(ff, vv), AstropyUserWarning) flatfile = prihdr.get('PFLTFILE', 'N/A') if flatfile == 'N/A': return None fla...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def extract_ref(scihdu, refhdu): """Extract section of the reference image that corresponds to the given science image. This only returns a view, not a copy of t...
same_size, rx, ry, x0, y0 = find_line(scihdu, refhdu) # Use the whole reference image if same_size: return refhdu.data # Binned data if rx != 1 or ry != 1: raise NotImplementedError( 'Either science or reference data are binned') # Extract a view of the sub-sectio...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def find_line(scihdu, refhdu): """Obtain bin factors and corner location to extract and bin the appropriate subset of a reference image to match a science image....
sci_bin, sci_corner = get_corner(scihdu.header) ref_bin, ref_corner = get_corner(refhdu.header) # We can use the reference image directly, without binning # and without extracting a subset. if (sci_corner[0] == ref_corner[0] and sci_corner[1] == ref_corner[1] and sci_bin[0] == ref_bin[...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_corner(hdr, rsize=1): """Obtain bin and corner information for a subarray. ``LTV1``, ``LTV2``, ``LTM1_1``, and ``LTM2_2`` keywords are extracted from the...
ltm, ltv = get_lt(hdr) return from_lt(rsize, ltm, ltv)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_lt(hdr): """Obtain the LTV and LTM keyword values. Note that this returns the values just as read from the header, which means in particular that the LTV...
ltm = (hdr.get('LTM1_1', 1.0), hdr.get('LTM2_2', 1.0)) if ltm[0] <= 0 or ltm[1] <= 0: raise ValueError('(LTM1_1, LTM2_2) = {0} is invalid'.format(ltm)) ltv = (hdr.get('LTV1', 0.0), hdr.get('LTV2', 0.0)) return ltm, ltv
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def from_lt(rsize, ltm, ltv): """Compute the corner location and pixel size in units of unbinned pixels. .. note:: Translated from ``calacs/lib/fromlt.c``. Param...
dbinx = rsize / ltm[0] dbiny = rsize / ltm[1] dxcorner = (dbinx - rsize) - dbinx * ltv[0] dycorner = (dbiny - rsize) - dbiny * ltv[1] # Round off to the nearest integer. bin = (_nint(dbinx), _nint(dbiny)) corner = (_nint(dxcorner), _nint(dycorner)) return bin, corner