Download train_classifier.py from apug-umich/EDC: direct link, hf CLI and curl.
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- Download file 1.83 kB
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https://huggingface.co/datasets/apug-umich/EDC/resolve/main/train_classifier.py
- Command line
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hf download hf://datasets/apug-umich/EDC/train_classifier.py
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curl -L -o train_classifier.py https://huggingface.co/datasets/apug-umich/EDC/resolve/main/train_classifier.py
1.83 kB
| import pandas as pd | |
| import numpy as np | |
| import matplotlib.pyplot as plt | |
| from sklearn.ensemble import RandomForestClassifier | |
| from sklearn.model_selection import train_test_split | |
| from sklearn.metrics import ( | |
| classification_report, | |
| confusion_matrix, | |
| ConfusionMatrixDisplay, | |
| roc_curve, | |
| auc | |
| ) | |
| # Load the dataset (adjust path if needed) | |
| df = pd.read_csv("edc_sanitized_with_fingerprints.csv") | |
| # Convert fingerprint column (stored as strings) back into lists | |
| df["fingerprint"] = df["fingerprint"].apply(eval) | |
| # Features and labels | |
| X = np.array(df["fingerprint"].tolist()) | |
| y = df["label"].values | |
| # Split into training and testing sets (80/20 split with stratification) | |
| X_train, X_test, y_train, y_test = train_test_split( | |
| X, y, test_size=0.2, stratify=y, random_state=42 | |
| ) | |
| # Train the classifier | |
| clf = RandomForestClassifier(random_state=42) | |
| clf.fit(X_train, y_train) | |
| # Predictions and probabilities | |
| y_pred = clf.predict(X_test) | |
| y_proba = clf.predict_proba(X_test)[:, 1] # Probabilities for class 1 | |
| # Print classification report | |
| print(classification_report(y_test, y_pred)) | |
| # --- Confusion Matrix --- | |
| cm = confusion_matrix(y_test, y_pred) | |
| disp = ConfusionMatrixDisplay(confusion_matrix=cm, display_labels=clf.classes_) | |
| disp.plot(cmap="Blues") | |
| plt.title("Confusion Matrix") | |
| plt.savefig("confusion_matrix.png") | |
| plt.show() | |
| # --- ROC Curve --- | |
| fpr, tpr, _ = roc_curve(y_test, y_proba) | |
| roc_auc = auc(fpr, tpr) | |
| plt.figure() | |
| plt.plot(fpr, tpr, color="darkorange", lw=2, label=f"ROC curve (AUC = {roc_auc:.2f})") | |
| plt.plot([0, 1], [0, 1], color="navy", lw=2, linestyle="--") | |
| plt.xlim([0.0, 1.0]) | |
| plt.ylim([0.0, 1.05]) | |
| plt.xlabel("False Positive Rate") | |
| plt.ylabel("True Positive Rate") | |
| plt.title("Receiver Operating Characteristic (ROC) Curve") | |
| plt.legend(loc="lower right") | |
| plt.savefig("roc_curve.png") | |
| plt.show() | |