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Download utils/mpdocbench_patch/dataset/end2end_dataset.py from baidu/MarathonDocBench: direct link, hf CLI and curl.
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https://huggingface.co/datasets/baidu/MarathonDocBench/resolve/main/utils/mpdocbench_patch/dataset/end2end_dataset.py
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44.7 kB
| import json | |
| import os | |
| from collections import defaultdict | |
| from utils.extract import md_tex_filter, extract_figure_boxes | |
| from utils.match import match_gt2pred_simple, match_gt2pred_no_split | |
| from utils.match_quick import match_gt2pred_quick | |
| from utils.merge_tables import merge_tables | |
| from utils.relation_utils import ( | |
| extract_table_truncated_info, detect_pred_merges, compute_relation_f1, | |
| split_pairs_by_page, _norm_table, | |
| extract_text_truncated_info, detect_pred_text_merges, _norm_text, | |
| ) | |
| from utils.read_files import read_md_file | |
| from utils.data_preprocess import normalized_table, clean_string | |
| from registry.registry import DATASET_REGISTRY | |
| from dataset.recog_dataset import * | |
| import Levenshtein | |
| from tqdm import tqdm | |
| from func_timeout import FunctionTimedOut, func_timeout | |
| from loguru import logger | |
| import signal | |
| import time | |
| import sys | |
| import multiprocessing as mp | |
| import pickle | |
| from pylatexenc.latex2text import LatexNodes2Text | |
| import traceback | |
| # ── Env switches (acceleration only; metric computation is unchanged) ── | |
| # MPDOC_MATCH_TIMEOUT: seconds for the text-match func_timeout (default 30; on | |
| # timeout it falls back to the coarser match_gt2pred_simple). Raise it so the | |
| # quality matcher finishes on very long documents. | |
| # MPDOC_EVAL_NPROC: documents matched in parallel (default 1 = serial, identical | |
| # to the original). Per-document matching is independent and order-preserving. | |
| # MPDOC_DOC_BUDGET: hard per-document wall-clock cap (seconds, default | |
| # max(timeout*3, 600)); over-budget documents are skipped and reported at the end. | |
| def _match_timeout(): | |
| try: | |
| v = int(os.environ.get('MPDOC_MATCH_TIMEOUT', '30') or 30) | |
| return v if v > 0 else 30 | |
| except ValueError: | |
| return 30 | |
| class _DocBudgetExceeded(BaseException): | |
| """A single document's matching exceeded MPDOC_DOC_BUDGET. | |
| Subclasses BaseException (not Exception) on purpose so it is not swallowed by | |
| the broad `except Exception` fallbacks in the matching path; it signals a | |
| control-flow abort, like KeyboardInterrupt / SystemExit. | |
| """ | |
| def _doc_budget(): | |
| raw = (os.environ.get('MPDOC_DOC_BUDGET', '') or '').strip() | |
| if raw.isdigit(): | |
| return int(raw) | |
| return max(_match_timeout() * 3, 600) | |
| def _run_with_budget(fn, *args): | |
| """Run one document's matching in a child process; SIGKILL it past the budget. | |
| An out-of-process hard kill does not rely on the callee's exception handling | |
| and can interrupt C-extension calls that hold the GIL. Uses fork so `self` | |
| need not be pickled. | |
| """ | |
| budget = _doc_budget() | |
| if budget <= 0: | |
| return fn(*args) | |
| ctx = mp.get_context('fork') | |
| recv, send = ctx.Pipe(duplex=False) | |
| def _child(): | |
| try: | |
| payload = (True, fn(*args)) | |
| except BaseException as exc: # 原样带回父进程重抛,语义与直接调用一致 | |
| payload = (False, exc) | |
| try: | |
| send.send_bytes(pickle.dumps(payload)) | |
| except Exception as exc: | |
| # 结果不可序列化时至少让父进程拿到原因,而不是误判成超预算 | |
| send.send_bytes(pickle.dumps((False, exc))) | |
| proc = ctx.Process(target=_child, daemon=True) | |
| proc.start() | |
| # 父进程不写:关掉自己这份写端,子进程异常退出时 poll 才会立刻返回而不是等满预算 | |
| send.close() | |
| try: | |
| if not recv.poll(budget): | |
| proc.kill() | |
| raise _DocBudgetExceeded() | |
| try: | |
| ok, payload = pickle.loads(recv.recv_bytes()) | |
| except EOFError: | |
| # 子进程一个字节都没写就死了(如被 OOM killer 杀),按超预算处理 | |
| raise _DocBudgetExceeded() | |
| if not ok: | |
| raise payload | |
| return payload | |
| finally: | |
| proc.join() | |
| recv.close() | |
| def _mp_worker(payload): | |
| ds, sample, pred_folder, save_time = payload | |
| img_name = os.path.basename(sample['page_info']['image_path']) | |
| try: | |
| return _run_with_budget(ds._process_one_doc, sample, pred_folder, save_time) | |
| except _DocBudgetExceeded: | |
| print(f'[MPDocBench] 单篇匹配超预算 {_doc_budget()}s,整篇跳过: {img_name}', flush=True) | |
| # 用独立标记而不是 None:None 已被"无预测文件"占用,混在一起就统计不出来 | |
| return {'img_name': img_name, 'pred_name': None, 'main': None, '_budget_exceeded': True} | |
| def remove_consecutive_duplicates(arr): | |
| """ | |
| 删除数组中连续的重复值,保留非连续的重复值 | |
| Args: | |
| arr: 输入的数组/列表 | |
| Returns: | |
| list: 删除连续重复值后的新列表 | |
| """ | |
| if not arr: | |
| return [] | |
| result = [arr[0]] # 第一个元素总是保留 | |
| for i in range(1, len(arr)): | |
| if arr[i] != arr[i-1]: # 只有当前元素与前一个不同时才添加 | |
| result.append(arr[i]) | |
| return result | |
| def compute_iou(box_a, box_b): | |
| """计算两个 [x1, y1, x2, y2] bbox 的 IoU。""" | |
| x_left = max(box_a[0], box_b[0]) | |
| y_top = max(box_a[1], box_b[1]) | |
| x_right = min(box_a[2], box_b[2]) | |
| y_bottom = min(box_a[3], box_b[3]) | |
| intersection = max(0, x_right - x_left) * max(0, y_bottom - y_top) | |
| area_a = (box_a[2] - box_a[0]) * (box_a[3] - box_a[1]) | |
| area_b = (box_b[2] - box_b[0]) * (box_b[3] - box_b[1]) | |
| union = area_a + area_b - intersection | |
| return intersection / union if union > 0 else 0 | |
| class End2EndDataset(): | |
| def __init__(self, cfg_task): | |
| gt_path = cfg_task['dataset']['ground_truth']['data_path'] | |
| pred_folder = cfg_task['dataset']['prediction']['data_path'] | |
| self.match_method = cfg_task['dataset'].get('match_method', 'quick_match') | |
| filtered_types = cfg_task['dataset'].get('filter') | |
| self.required_metrics = set(cfg_task.get('metrics', {}).keys()) | |
| with open(gt_path, 'r') as f: | |
| gt_samples = json.load(f) | |
| filtered_gt_samples = [] | |
| if filtered_types: | |
| for gt_sample in gt_samples: | |
| select_flag = True | |
| for k, v in filtered_types.items(): | |
| if gt_sample["page_info"]["page_attribute"][k] != v: | |
| select_flag = False | |
| if select_flag: | |
| filtered_gt_samples.append(gt_sample) | |
| else: | |
| filtered_gt_samples = gt_samples | |
| self.samples = self.get_matched_elements(filtered_gt_samples, pred_folder) | |
| def __getitem__(self, cat_name, idx): | |
| return self.samples[cat_name][idx] | |
| # 处理json中标题中的父亲,儿子关系 | |
| def get_document_heads(self, selected_annos): | |
| parent_son_list, all_nodes, head_nodes = [], {}, {} | |
| for item in selected_annos['layout_dets']: | |
| if item["category_type"] == "title": | |
| head_nodes[item["anno_id"]] = item | |
| all_nodes[item["anno_id"]] = item | |
| for relation in selected_annos["extra"]["relation"]: # Handle truncated text issues | |
| if relation["relation_type"] == 'parent_son': | |
| source_anno_id = relation["source_anno_id"] | |
| target_anno_id = relation["target_anno_id"] | |
| if (source_anno_id in head_nodes or source_anno_id == "root") and target_anno_id in head_nodes: | |
| parent_son_list.append(relation) | |
| return parent_son_list, head_nodes | |
| # 匹配元素 处理文本截断问题,将截断的文本块合并,并将元素按类别存储在字典中 | |
| def get_page_elements(self, selected_annos): | |
| saved_element_dict = defaultdict(list) #存储元素 | |
| related_truncated = [] #存储需要合并的截断文本块列表 | |
| truncated_all = {} #存储截断文本块信息 | |
| for relation in selected_annos["extra"]["relation"]: # Handle truncated text issues | |
| if relation["relation_type"] == 'truncated': | |
| truncated_all[relation["source_anno_id"]] = "" | |
| truncated_all[relation["target_anno_id"]] = "" | |
| exist_flag = False | |
| for merge_list in related_truncated: | |
| if relation["source_anno_id"] in merge_list or relation["target_anno_id"] in merge_list: # Consider cases where three text blocks may need to be merged | |
| merge_list.append(relation["source_anno_id"]) | |
| merge_list.append(relation["target_anno_id"]) | |
| exist_flag = True | |
| if not exist_flag: | |
| related_truncated.append([relation["source_anno_id"], relation["target_anno_id"]]) | |
| for item in selected_annos['layout_dets']: | |
| if item['anno_id'] not in truncated_all.keys(): | |
| saved_element_dict[item["category_type"]].append(item) | |
| else: | |
| truncated_all[item['anno_id']] = item | |
| for merge_list in related_truncated: | |
| merge_list = remove_consecutive_duplicates(merge_list) | |
| text_block_list = [truncated_all[key] for key in merge_list] | |
| # order 字段在本批 GT 里为 None:裸键 sorted(None,None) 会触发 '<' not supported | |
| # (CPython 序比较算子不走身份短路)。与 get_sorted_text_list 同口径把 None/空强转 0, | |
| # 既兼容官方 int-order 数据,又让 None-order 切片在回填 truncated 边后可排序。 | |
| sorted_block = sorted(text_block_list, key=lambda x: (x.get('order') or 0)) | |
| page_ids = set([block['page_id'] for block in sorted_block]) | |
| if sorted_block[0]['category_type'] == 'table': # merge tabel blocks but keep category as text_block | |
| if sorted_block[0].get("merged_html") is not None: | |
| html = sorted_block[0]["merged_html"] | |
| else: | |
| print(f'{selected_annos["page_info"]["image_path"]} has a merged table group {"_".join([str(block["anno_id"]) for block in sorted_block])} with no merged_html annotation.') | |
| html = merge_tables([block['html'] for block in sorted_block]) | |
| merged_block = { | |
| "category_type": sorted_block[0]["category_type"], # Directly use information from the first block | |
| "order": sorted_block[0]["order"], | |
| "anno_id": sorted_block[0]["anno_id"], | |
| "html": html, | |
| "merge_list": sorted_block, | |
| "is_merged": "table", | |
| "attribute": {"table_merge_cross_pages": str(len(page_ids))} | |
| } | |
| else: # merge text blocks | |
| text = "" | |
| try: | |
| for block in sorted_block: | |
| text += block.get('text', "") | |
| except Exception as e: | |
| print(sorted_block, selected_annos["page_info"]) | |
| merged_block = { | |
| "category_type": sorted_block[0]["category_type"], # Directly use information from the first block | |
| "order": sorted_block[0]["order"], | |
| "anno_id": sorted_block[0]["anno_id"], | |
| "text": text, | |
| "merge_list": sorted_block, | |
| # 2026-09-23: T-TextEdit(merged_text_block)从"仅 text_block"放宽到 | |
| # TextEdit 计分文本集,让文字类跨页(title/reference/code_txt 及经 RAW2NATIVE | |
| # 归到 text_block 的 aside_text 等)都进跨页拼接评测。标记值仍用 'text_block' | |
| # 以兼容下游 merged_gt_mix 的 is_merged=='text_block' 过滤。 | |
| "is_merged": "text_block" if sorted_block[0]["category_type"] in ( | |
| "text_block", "title", "reference", "code_txt", "code_txt_caption") else "unknown", | |
| } | |
| if merged_block.get("is_merged") == "text_block": | |
| merged_block["attribute"] = {"text_merge_cross_pages": str(len(page_ids))} | |
| saved_element_dict[sorted_block[0]["category_type"]].append(merged_block) | |
| return saved_element_dict | |
| # 根据类别列表 category_list 从 gt_page_elements 中提取元素,并将它们合并到一个列表中 | |
| def get_page_elements_list(self, gt_page_elements, category_list): | |
| element_list = [] | |
| for category_type in category_list: | |
| if gt_page_elements.get(category_type): | |
| element_list.extend(gt_page_elements[category_type]) | |
| return element_list | |
| # 根据元素的 order 字段对元素列表进行排序,并返回排序后的元素列表。 | |
| def get_sorted_text_list(self, selected_annos): | |
| # txt_type: text, latex, html | |
| text_list = [] | |
| for item in selected_annos: | |
| if item.get('order'): | |
| order = item['order'] | |
| else: | |
| order = 0 | |
| text_list.append((order, item)) | |
| sorted_text_list = sorted(text_list, key=lambda x: x[0]) | |
| return [_[1] for _ in sorted_text_list] | |
| # 从元素列表 items 中过滤掉 gt_category_type 在 ignore_category_list 中的元素。 | |
| def filtered_out_ignore(self, items, ignore_category_list): | |
| filted_items = [] | |
| for item in items: | |
| if item['gt_category_type'] not in ignore_category_list: | |
| filted_items.append(item) | |
| return filted_items | |
| def get_head_paired(self, parent_son_list, head_nodes, md_text_all_list, img_name): | |
| md_text_all_list.sort(key=lambda x: x['position'][0]) | |
| md_head_list = [] | |
| for item in md_text_all_list: | |
| if item['content'].strip().startswith('#'): | |
| md_head_list.append(item['content'].strip()) | |
| return { | |
| "gt": [parent_son_list, head_nodes], | |
| "pred": md_head_list, | |
| "img_id": img_name, | |
| "edit": 1.0, | |
| } | |
| # 计算预测结果和地面真值的阅读顺序之间的编辑距离,并返回包含相关信息的字典。 | |
| def get_order_paired(self, order_match_s, img_name): | |
| matched = [(item['gt_position'], item['pred_position']) for item in order_match_s if (item['gt_position'] != [""] and item['pred_position'] != "")] | |
| gt_idx_all = [item['gt_position'] for item in order_match_s if (item['gt_position'] != [""])] | |
| read_order_pred = [i[0] for i in sorted(matched, key=lambda x: x[1])] # Sort by pred idx to get Pred ordered GT_idx | |
| read_order_gt = sum(gt_idx_all, []) # Convert to one-dimensional list | |
| read_order_gt = [x for x in read_order_gt if x] # For truncated merges, some discarded classes may be merged in, remove them when calculating edit distance | |
| gt = sorted(read_order_gt) # Sort by all GT idx to get GT ordered GT_idx | |
| pred = sum(read_order_pred, []) | |
| pred = [x for x in pred if x] | |
| if len(pred) > 0 or len(gt) > 0: | |
| edit = Levenshtein.distance(gt, pred)/ max(len(pred), len(gt)) | |
| return { | |
| 'gt': gt, | |
| 'pred': pred, | |
| 'img_id': img_name, | |
| 'edit': edit | |
| } | |
| else: | |
| return {} # If both GT and pred are empty for the page, return empty | |
| # 为公式匹配结果添加 img_id 信息。 | |
| def formula_format(self, formula_matches, img_name): | |
| # formated_list = [] | |
| for i, item in enumerate(formula_matches): | |
| item["img_id"] = img_name + '_' + str(i) | |
| return formula_matches | |
| def get_figure_matched(self, sample, pred_figures, img_name, iou_threshold=0.5): | |
| """对单个文档进行 GT 与 Pred 的 figure IoU 匹配,计算召回。 | |
| Args: | |
| sample: GT 文档数据(包含 layout_dets, page_info) | |
| pred_figures: extract_figure_boxes() 返回的预测图片列表 | |
| img_name: 文档图片名 | |
| iou_threshold: IoU 匹配阈值 | |
| Returns: | |
| 匹配结果 dict,若无 GT figure 则返回 None | |
| """ | |
| # 提取 GT figures | |
| gt_figures = [] | |
| page_info = sample.get('page_info', {}) | |
| widths = page_info.get('width', []) | |
| heights = page_info.get('height', []) | |
| for det in sample.get('layout_dets', []): | |
| if det.get('category_type') != 'figure': | |
| continue | |
| page_id = det.get('page_id') | |
| poly = det.get('poly', []) | |
| if page_id is None or len(poly) < 6: | |
| continue | |
| # 检查是否有该页的尺寸信息 | |
| page_idx = page_id - 1 | |
| if page_idx < 0 or page_idx >= len(widths) or page_idx >= len(heights): | |
| continue | |
| pw, ph = widths[page_idx], heights[page_idx] | |
| if not pw or not ph: | |
| continue | |
| # poly 格式: [x1,y1, x2,y1, x2,y2, x1,y2] → 归一化到 0-1000 | |
| norm_x1 = poly[0] / pw * 1000 | |
| norm_y1 = poly[1] / ph * 1000 | |
| norm_x2 = poly[4] / pw * 1000 | |
| norm_y2 = poly[5] / ph * 1000 | |
| gt_figures.append({ | |
| "page_id": page_id, | |
| "bbox_norm": [norm_x1, norm_y1, norm_x2, norm_y2], | |
| "label": det.get('label', 'figure') | |
| }) | |
| if not gt_figures: | |
| return None | |
| # 按 page_id 分组 | |
| gt_by_page = defaultdict(list) | |
| for i, fig in enumerate(gt_figures): | |
| gt_by_page[fig['page_id']].append((i, fig['bbox_norm'])) | |
| pred_by_page = defaultdict(list) | |
| for j, fig in enumerate(pred_figures): | |
| pred_by_page[fig['page_id']].append((j, fig['bbox_norm'])) | |
| # 贪心匹配:收集所有 (gt_idx, pred_idx, iou),按 iou 降序,逐一匹配 | |
| all_pairs = [] | |
| for page_id in gt_by_page: | |
| for gi, g_box in gt_by_page[page_id]: | |
| for pi, p_box in pred_by_page.get(page_id, []): | |
| iou = compute_iou(g_box, p_box) | |
| if iou >= iou_threshold: | |
| all_pairs.append((gi, pi, iou)) | |
| all_pairs.sort(key=lambda x: x[2], reverse=True) | |
| matched_gt = set() | |
| matched_pred = set() | |
| matches = [] | |
| for gi, pi, iou in all_pairs: | |
| if gi not in matched_gt and pi not in matched_pred: | |
| matched_gt.add(gi) | |
| matched_pred.add(pi) | |
| matches.append({"gt_idx": gi, "pred_idx": pi, "iou": iou}) | |
| gt_count = len(gt_figures) | |
| matched_count = len(matches) | |
| # 按 figure label 统计 gt_count 和 matched_count | |
| label_stats = defaultdict(lambda: {'gt_count': 0, 'matched_count': 0}) | |
| for i, fig in enumerate(gt_figures): | |
| label = fig.get('label', 'figure') | |
| label_stats[label]['gt_count'] += 1 | |
| if i in matched_gt: | |
| label_stats[label]['matched_count'] += 1 | |
| return { | |
| "img_id": img_name, | |
| "gt_count": gt_count, | |
| "pred_count": len(pred_figures), | |
| "matched_count": matched_count, | |
| "gt": "", | |
| "pred": "", | |
| "gt_attribute": [page_info.get('page_attribute', {})], | |
| "metric": {}, | |
| "label_stats": dict(label_stats), | |
| } | |
| def get_table_relation_matched(self, sample, pred_tables_html, img_name, match_threshold=0.15): | |
| """计算单个文档的表格 truncated 关系 F1 数据。""" | |
| # 1. 提取 GT truncated pairs | |
| gt_pairs, groups, anno_map = extract_table_truncated_info(sample) | |
| # 2. 获取全量 GT 表格,按文档顺序排列 | |
| all_gt_tables = [ | |
| item for item in sample["layout_dets"] | |
| if item.get("category_type") == "table" | |
| ] | |
| all_gt_tables.sort( | |
| key=lambda x: (x.get("page_id", 0), x.get("order", float("inf"))) | |
| ) | |
| # 3. 如果 GT 无表格或双方都没有 pair 潜力 -> 跳过 | |
| if not all_gt_tables or (not gt_pairs and not pred_tables_html): | |
| return None | |
| # 4. 归一化 pred 表格 | |
| pred_norm = [_norm_table(pt["content"]) for pt in pred_tables_html] | |
| # 5. Pred->GT 跨度搜索 | |
| pred_pairs, pred_match_detail = detect_pred_merges( | |
| all_gt_tables, pred_norm, match_threshold=match_threshold | |
| ) | |
| # 6. 如果双方都没有合并对 -> 跳过 | |
| if not gt_pairs and not pred_pairs: | |
| return None | |
| # 7. 计算 F1 | |
| metrics = compute_relation_f1(gt_pairs, pred_pairs) | |
| # 8. 按同页/跨页拆分 | |
| gt_same, gt_cross = split_pairs_by_page(gt_pairs, anno_map) | |
| pred_same, pred_cross = split_pairs_by_page(pred_pairs, anno_map) | |
| metrics_same = compute_relation_f1(gt_same, pred_same) | |
| metrics_cross = compute_relation_f1(gt_cross, pred_cross) | |
| page_info = sample.get("page_info", {}) | |
| return { | |
| "img_id": img_name, | |
| "gt_pairs_count": len(gt_pairs), | |
| "pred_pairs_count": len(pred_pairs), | |
| "gt_tables_count": len(all_gt_tables), | |
| "pred_tables_count": len(pred_tables_html), | |
| "tp": metrics["tp"], | |
| "fp": metrics["fp"], | |
| "fn": metrics["fn"], | |
| # 同页分项 | |
| "same_page_tp": metrics_same["tp"], | |
| "same_page_fp": metrics_same["fp"], | |
| "same_page_fn": metrics_same["fn"], | |
| # 跨页分项 | |
| "cross_page_tp": metrics_cross["tp"], | |
| "cross_page_fp": metrics_cross["fp"], | |
| "cross_page_fn": metrics_cross["fn"], | |
| "gt": "", | |
| "pred": "", | |
| "gt_attribute": [page_info.get("page_attribute", {})], | |
| "metric": {}, | |
| } | |
| def get_text_relation_matched(self, sample, pred_text_blocks, img_name, match_threshold=0.15): | |
| """计算单个文档的段落 truncated 关系 F1 数据。""" | |
| # 1. 提取 GT truncated pairs | |
| gt_pairs, groups, anno_map = extract_text_truncated_info(sample) | |
| # 2. 获取全量 GT text_block,按文档顺序排列 | |
| all_gt_texts = [ | |
| item for item in sample["layout_dets"] | |
| if item.get("category_type") == "text_block" | |
| ] | |
| all_gt_texts.sort( | |
| key=lambda x: (x.get("page_id", 0), x.get("order", float("inf"))) | |
| ) | |
| # 3. 如果 GT 无文本块或双方都没有 pair 潜力 -> 跳过 | |
| if not all_gt_texts or (not gt_pairs and not pred_text_blocks): | |
| return None | |
| # 4. 归一化 pred 文本块 | |
| pred_norm = [_norm_text(pt["content"]) for pt in pred_text_blocks] | |
| # 5. Pred->GT 跨度搜索 | |
| pred_pairs, pred_match_detail = detect_pred_text_merges( | |
| all_gt_texts, pred_norm, match_threshold=match_threshold | |
| ) | |
| # 6. 如果双方都没有合并对 -> 跳过 | |
| if not gt_pairs and not pred_pairs: | |
| return None | |
| # 7. 计算 F1 | |
| metrics = compute_relation_f1(gt_pairs, pred_pairs) | |
| # 8. 按同页/跨页拆分 | |
| gt_same, gt_cross = split_pairs_by_page(gt_pairs, anno_map) | |
| pred_same, pred_cross = split_pairs_by_page(pred_pairs, anno_map) | |
| metrics_same = compute_relation_f1(gt_same, pred_same) | |
| metrics_cross = compute_relation_f1(gt_cross, pred_cross) | |
| page_info = sample.get("page_info", {}) | |
| return { | |
| "img_id": img_name, | |
| "gt_pairs_count": len(gt_pairs), | |
| "pred_pairs_count": len(pred_pairs), | |
| "gt_texts_count": len(all_gt_texts), | |
| "pred_texts_count": len(pred_text_blocks), | |
| "tp": metrics["tp"], | |
| "fp": metrics["fp"], | |
| "fn": metrics["fn"], | |
| # 同页分项 | |
| "same_page_tp": metrics_same["tp"], | |
| "same_page_fp": metrics_same["fp"], | |
| "same_page_fn": metrics_same["fn"], | |
| # 跨页分项 | |
| "cross_page_tp": metrics_cross["tp"], | |
| "cross_page_fp": metrics_cross["fp"], | |
| "cross_page_fn": metrics_cross["fn"], | |
| "gt": "", | |
| "pred": "", | |
| "gt_attribute": [page_info.get("page_attribute", {})], | |
| "metric": {}, | |
| } | |
| # 对gt和预测结果进行匹配,调用 process_get_matched_elements 函数进行匹配处理,最终将匹配结果整理成一个字典返回 | |
| def _process_one_doc(self, sample, pred_folder, save_time=0): | |
| """Match one document; shared by the serial and parallel paths | |
| (returns None when there is no prediction file). Only difference from the | |
| original inline version: table_relation / text_relation are computed only | |
| when those metrics are actually requested.""" | |
| img_name = os.path.basename(sample["page_info"]["image_path"]) | |
| pred_path = os.path.join(pred_folder, img_name[:-4] + '.md') | |
| if not os.path.exists(pred_path): | |
| pred_path = os.path.join(pred_folder, img_name[:-4].replace('.pdf', "") + '.mmd') # nougat | |
| if not os.path.exists(pred_path): | |
| pred_path = os.path.join(pred_folder, img_name[:-4].replace('.pdf', "") + '.md') # marker | |
| if not os.path.exists(pred_path): | |
| pred_path = os.path.join(pred_folder, img_name + '.md') | |
| if not os.path.exists(pred_path): # mineru | |
| print(f'!!!WARNING: No prediction for {img_name}') | |
| return None | |
| pred_content = read_md_file(pred_path) | |
| need = self.required_metrics | |
| out = {'img_name': img_name, 'pred_name': os.path.basename(pred_path), 'main': None} | |
| # figure 匹配(在 md_tex_filter 之前提取,因为 md_tex_filter 会去掉图片引用) | |
| if not need or 'figure' in need: | |
| out['figure'] = self.get_figure_matched(sample, extract_figure_boxes(pred_content), img_name) | |
| # relation 匹配(检测 pred 是否正确合并了 truncated 表格/段落)—— 按需计算 | |
| if not need or ({'table_relation', 'text_relation'} & set(need)): | |
| pred_dataset_for_relation = md_tex_filter(pred_content) | |
| if not need or 'table_relation' in need: | |
| out['table_relation'] = self.get_table_relation_matched( | |
| sample, list(pred_dataset_for_relation.get("html_table", [])), img_name) | |
| if not need or 'text_relation' in need: | |
| out['text_relation'] = self.get_text_relation_matched( | |
| sample, list(pred_dataset_for_relation.get("text_all", [])), img_name) | |
| # 如果只需要 figure / table_relation / text_relation 指标,跳过耗时的文本/表格/公式匹配 | |
| if need and need <= {'figure', 'table_relation', 'text_relation'}: | |
| return out | |
| out['main'] = self.process_get_matched_elements(sample, pred_content, img_name, save_time) | |
| return out | |
| def get_matched_elements(self, gt_samples, pred_folder): | |
| plain_text_match = [] | |
| merged_plain_text_match = [] | |
| display_formula_match = [] | |
| html_table_match = [] | |
| merged_html_table_match = [] | |
| latex_table_match = [] | |
| merged_latex_table_match = [] | |
| order_match = [] | |
| head_match = [] | |
| figure_match = [] | |
| table_relation_match = [] | |
| text_relation_match = [] | |
| save_time = time.time() | |
| nproc = int(os.environ.get('MPDOC_EVAL_NPROC', '1') or 1) | |
| if nproc > 1: | |
| from concurrent.futures import ProcessPoolExecutor, as_completed | |
| print(f'[MPDocBench] 按文档并行匹配: MPDOC_EVAL_NPROC={nproc}') | |
| # 原来用 ex.map:它按提交顺序产出,进度条会被最慢的一篇顶住不动 | |
| # (现场出现过 63/100 停两小时,其后已算完的都不显示,外部误判成卡死)。 | |
| # 改成 submit + as_completed 实时推进度,再按下标回填, | |
| # 结果顺序与 map 完全一致,指标逐位可复现。 | |
| doc_results = [None] * len(gt_samples) | |
| with ProcessPoolExecutor(max_workers=nproc) as ex: | |
| future_to_idx = { | |
| ex.submit(_mp_worker, (self, s, pred_folder, save_time)): i | |
| for i, s in enumerate(gt_samples) | |
| } | |
| with tqdm(total=len(gt_samples), ascii=True, ncols=140) as bar: | |
| for fut in as_completed(future_to_idx): | |
| doc_results[future_to_idx[fut]] = fut.result() | |
| bar.update(1) | |
| else: | |
| doc_results = [] | |
| process_bar = tqdm(gt_samples, ascii=True, ncols=140) | |
| for sample in process_bar: | |
| res = _mp_worker((self, sample, pred_folder, save_time)) | |
| if res and not res.get('_budget_exceeded'): | |
| process_bar.set_description(f"Processing {res['pred_name']}") | |
| doc_results.append(res) | |
| budget_skipped = [r['img_name'] for r in doc_results if r and r.get('_budget_exceeded')] | |
| if budget_skipped: | |
| print(f'[MPDocBench] 警告: {len(budget_skipped)} 篇文档超出单篇预算 ' | |
| f'{_doc_budget()}s 被整篇跳过,其所有 element 均不计分,' | |
| f'本轮总分与历史跑分不可比:', flush=True) | |
| for name in budget_skipped: | |
| print(f' - {name}', flush=True) | |
| for res in doc_results: | |
| if not res: | |
| continue | |
| if res.get('_budget_exceeded'): | |
| continue | |
| if res.get('figure'): | |
| figure_match.append(res['figure']) | |
| if res.get('table_relation'): | |
| table_relation_match.append(res['table_relation']) | |
| if res.get('text_relation'): | |
| text_relation_match.append(res['text_relation']) | |
| if res.get('main') is None: | |
| continue | |
| [plain_text_match_clean, merged_plain_text_match_clean, formated_display_formula, \ | |
| latex_table_match_s, merged_latex_table_match_s, html_table_match_s, merged_html_table_match_s, \ | |
| order_match_single, head_match_single] = res['main'] | |
| if order_match_single: | |
| order_match.append(order_match_single) | |
| if head_match_single: | |
| head_match.append(head_match_single) | |
| if plain_text_match_clean: | |
| plain_text_match.extend(plain_text_match_clean) | |
| if formated_display_formula: | |
| display_formula_match.extend(formated_display_formula) | |
| if latex_table_match_s: | |
| latex_table_match.extend(latex_table_match_s) | |
| if html_table_match_s: | |
| html_table_match.extend(html_table_match_s) | |
| if merged_html_table_match_s: | |
| merged_html_table_match.extend(merged_html_table_match_s) | |
| if merged_plain_text_match_clean: | |
| merged_plain_text_match.extend(merged_plain_text_match_clean) | |
| if merged_latex_table_match_s: | |
| merged_latex_table_match.extend(merged_latex_table_match_s) | |
| # 如果只需要 figure / table_relation / text_relation 指标,直接返回结果,跳过后续文本/表格后处理 | |
| if self.required_metrics and self.required_metrics <= {'figure', 'table_relation', 'text_relation'}: | |
| matched_samples_all = { | |
| 'figure': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(figure_match), | |
| 'table_relation': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(table_relation_match), | |
| 'text_relation': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(text_relation_match), | |
| } | |
| return matched_samples_all | |
| display_formula_match_clean,display_formula_match_others = [],[] | |
| for item in display_formula_match: | |
| pred_category_type = item.get("pred_category_type",None) | |
| # if pred_category_type == 'equation_inline': | |
| if pred_category_type not in ['equation_inline','equation_isolated', '']: | |
| gt = item.get('gt',None) | |
| norm_gt = item.get('norm_gt',None) | |
| ## latex2unicode | |
| # pylatexenc 对含空矩阵环境(\begin{matrix}\end{matrix} 无行)等病态 latex 会抛 | |
| # ValueError("max() arg is an empty sequence"), 单条公式即可中断整轮评分。 | |
| # 这里捕获后回退原始文本, 仅该条指标受影响而非全量崩。 | |
| try: | |
| item['gt'] = LatexNodes2Text().latex_to_text(gt) | |
| except Exception: | |
| item['gt'] = gt if gt is not None else '' | |
| # item['norm_gt'] = LatexNodes2Text().latex_to_text(norm_gt) # 错了,这里的norm gt是跑的normalized_formula函数,所以再跑latex2unicode会报错 | |
| # 这里的norm_gt应该是跑文本的nrom了 | |
| item['norm_gt'] = clean_string(item['gt']) | |
| display_formula_match_others.append(item) | |
| else: | |
| display_formula_match_clean.append(item) | |
| display_formula_match = display_formula_match_clean | |
| if display_formula_match_others and plain_text_match: | |
| plain_text_match.extend(display_formula_match_others) | |
| # 将latex合并到html 全量428 | |
| if latex_table_match: | |
| latex_to_html = [] | |
| for latex_table in latex_table_match: | |
| for k,v in latex_table.items(): | |
| if 'pred' in k: | |
| latex_table[k] = "" | |
| latex_table['edit'] = 1 | |
| latex_to_html.append(latex_table) | |
| html_table_match.extend(latex_to_html) | |
| if merged_latex_table_match: | |
| merged_latex_to_html = [] | |
| for latex_table in merged_latex_table_match: | |
| for k,v in latex_table.items(): | |
| if 'pred' in k: | |
| latex_table[k] = "" | |
| latex_table['edit'] = 1 | |
| merged_latex_to_html.append(latex_table) | |
| merged_html_table_match.extend(merged_latex_to_html) | |
| if len(latex_table_match) > len(html_table_match): # Assume model won't randomly output both latex and html, but will choose one | |
| table_match = latex_table_match | |
| merged_table_match = merged_latex_table_match | |
| table_format = 'latex' | |
| else: | |
| table_match = html_table_match | |
| merged_table_match = merged_html_table_match | |
| table_format = 'html' | |
| # with open('./qwen_latex_table_match.json','w',encoding='utf-8') as f: | |
| # json.dump(latex_table_match,f,indent=4,ensure_ascii=False) | |
| # with open('./qwen_html_table_match.json','w',encoding='utf-8') as f: | |
| # json.dump(html_table_match,f,indent=4,ensure_ascii=False) | |
| matched_samples_all = { | |
| 'text_block': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(plain_text_match), | |
| "merged_text_block": DATASET_REGISTRY.get('recogition_end2end_base_dataset')(merged_plain_text_match), | |
| 'display_formula': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(display_formula_match), | |
| 'table': DATASET_REGISTRY.get('recogition_end2end_table_dataset')(table_match, table_format), | |
| 'merged_table': DATASET_REGISTRY.get('recogition_end2end_table_dataset')(merged_table_match, table_format), | |
| 'reading_order': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(order_match), | |
| "head": DATASET_REGISTRY.get('recogition_end2end_base_dataset')(head_match), | |
| 'figure': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(figure_match), | |
| 'table_relation': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(table_relation_match), | |
| 'text_relation': DATASET_REGISTRY.get('recogition_end2end_base_dataset')(text_relation_match), | |
| } | |
| return matched_samples_all | |
| #0403 提取gt的table跟pred的table进行匹配 -> 未匹配上的pred_table 去掉html格式然后丢进去混合匹配 | |
| def process_get_matched_elements(self, sample, pred_content, img_name, save_time): | |
| if self.match_method == 'simple_match': # add match choice | |
| match_gt2pred = match_gt2pred_simple | |
| elif self.match_method == 'quick_match': | |
| match_gt2pred = match_gt2pred_quick | |
| elif self.match_method == 'no_split': | |
| match_gt2pred = match_gt2pred_no_split | |
| else: | |
| print('Invalid match method name. The quick_match will be used.') | |
| match_gt2pred = match_gt2pred_quick | |
| pred_dataset = md_tex_filter(pred_content) | |
| gt_page_elements = self.get_page_elements(sample) | |
| parent_son_list, head_nodes = self.get_document_heads(sample) | |
| gt_mix,pred_dataset_mix = [],[] | |
| for category in pred_dataset: | |
| if category not in ['html_table','latex_table','md2html_table']: | |
| pred_dataset_mix.extend(pred_dataset[category]) | |
| # for category in gt_page_elements: | |
| # if category not in ['table']: | |
| # gt_mix.extend(gt_page_elements[category]) | |
| gt_mix = self.get_page_elements_list(gt_page_elements, ['text_block', 'title', 'code_txt', 'code_txt_caption', 'reference', 'equation_caption', | |
| 'figure_caption', 'figure_footnote', 'table_caption', 'table_footnote', 'code_algorithm', 'code_algorithm_caption', | |
| 'header', 'footer', 'page_footnote', 'page_number', 'equation_isolated']) | |
| if gt_mix: | |
| gt_mix = self.get_sorted_text_list(gt_mix) | |
| display_formula_match_s = [] | |
| plain_text_match_clean = [] | |
| merged_plain_text_match_clean = [] | |
| latex_table_match_s = [] | |
| html_table_match_s = [] | |
| merged_latex_table_match_s = [] | |
| merged_html_table_match_s = [] | |
| order_match_single = [] | |
| head_match_single = [] | |
| if gt_page_elements.get('table'): | |
| gt_table = self.get_sorted_text_list(gt_page_elements['table']) | |
| merged_gt_table = [table_sample for table_sample in self.get_sorted_text_list(gt_page_elements['table']) if table_sample.get('is_merged') == 'table'] | |
| latex_table_len = len(pred_dataset['latex_table']) if pred_dataset['latex_table'] else 0 | |
| html_table_len = len(pred_dataset['html_table']) if pred_dataset['html_table'] else 0 | |
| if latex_table_len == html_table_len and latex_table_len == 0: | |
| html_table_match_s,unmatch_table_pred = match_gt2pred_simple(gt_table, [], 'html_table', img_name) # Don't consider truncated merging for tables | |
| html_table_match_s = [x for x in html_table_match_s if x['gt_idx'] != [""]] # Remove extra preds | |
| merged_html_table_match_s, _ = match_gt2pred_simple(merged_gt_table, [], 'html_table', img_name) # Don't consider truncated merging for tables | |
| merged_html_table_match_s = [x for x in merged_html_table_match_s if x['gt_idx'] != [""]] # Remove extra preds | |
| elif latex_table_len > html_table_len: | |
| latex_table_match_s, unmatch_table_pred = match_gt2pred_simple(gt_table, pred_dataset['latex_table'], 'latex_table', img_name) # Don't consider truncated merging for tables | |
| latex_table_match_s = [x for x in latex_table_match_s if x['gt_idx'] != [""]] # Remove extra preds | |
| merged_latex_table_match_s, _ = match_gt2pred_simple(merged_gt_table, pred_dataset['latex_table'], 'latex_table', img_name) # Don't consider truncated merging for tables | |
| merged_latex_table_match_s = [x for x in merged_latex_table_match_s if x['gt_idx'] != [""]] # Remove extra preds | |
| else: | |
| html_table_match_s,unmatch_table_pred = match_gt2pred_simple(gt_table, pred_dataset['html_table'], 'html_table', img_name) # Don't consider truncated merging for tables | |
| html_table_match_s = [x for x in html_table_match_s if x['gt_idx'] != [""]] # Remove extra preds | |
| merged_html_table_match_s, _ = match_gt2pred_simple(merged_gt_table, pred_dataset['html_table'], 'html_table', img_name) # Don't consider truncated merging for tables | |
| merged_html_table_match_s = [x for x in merged_html_table_match_s if x['gt_idx'] != [""]] # Remove extra preds | |
| if unmatch_table_pred: | |
| pred_dataset_mix.extend(unmatch_table_pred) | |
| head_match_single = self.get_head_paired(parent_son_list, head_nodes, pred_dataset_mix, img_name) | |
| try: | |
| match = func_timeout(_match_timeout(), match_gt2pred, args=(gt_mix, pred_dataset_mix, 'text_all', img_name)) | |
| except FunctionTimedOut as e1: | |
| print(f'Time out for plain text match of {img_name}, match_gt2pred_simple will be used.') | |
| match,_ = match_gt2pred_simple(gt_mix, pred_dataset_mix, 'text_all', img_name) | |
| except Exception as e: | |
| print(traceback.format_exc()) | |
| sys.exit() | |
| merged_gt_mix = [gt for gt in gt_mix if gt.get('is_merged') == 'text_block'] | |
| merged_plain_text_match_clean, _ = match_gt2pred_simple(merged_gt_mix, pred_dataset_mix, 'text_all', img_name) # Consider truncated merging for text blocks | |
| merged_plain_text_match_clean = [x for x in merged_plain_text_match_clean if x['gt_idx'] != [""]] | |
| plain_text_match_s = [] | |
| for item in match: | |
| gt_category = item.get('gt_category_type',None) | |
| if gt_category in ['text_block', 'title', 'code_txt', 'code_txt_caption', 'reference', 'equation_caption', | |
| 'figure_caption', 'figure_footnote', 'table_caption', 'table_footnote', 'code_algorithm', 'code_algorithm_caption', | |
| 'header', 'footer', 'page_footnote', 'page_number']: | |
| plain_text_match_s.append(item) | |
| elif gt_category == 'equation_isolated': | |
| display_formula_match_s.append(item) | |
| display_formula_match_s = [x for x in display_formula_match_s if x['gt_idx'] != [""]] | |
| if not plain_text_match_s: | |
| pass | |
| else: | |
| # Categories that need to be ignored for text | |
| plain_text_match_clean = self.filtered_out_ignore(plain_text_match_s, ['figure_caption', 'figure_footnote', 'table_caption', 'table_footnote', 'code_algorithm', 'code_algorithm_caption', 'header', 'footer', 'page_footnote', 'page_number', 'equation_caption']) | |
| # plain_text_match_clean = self.filtered_out_ignore(plain_text_match_s, ['figure_footnote', 'table_footnote', 'code_algorithm', 'code_algorithm_caption', 'header', 'footer', 'page_footnote', 'page_number']) | |
| order_match_s = plain_text_match_clean | |
| if order_match_s: | |
| order_match_single = self.get_order_paired(order_match_s, img_name) | |
| return [plain_text_match_clean, merged_plain_text_match_clean, display_formula_match_s, latex_table_match_s, merged_latex_table_match_s, html_table_match_s, merged_html_table_match_s, order_match_single, head_match_single] | |
| class RecognitionEnd2EndBaseDataset(): | |
| def __init__(self, samples): | |
| img_id = 0 | |
| for sample in samples: | |
| if not sample.get('img_id'): | |
| sample['img_id'] = img_id | |
| img_id += 1 | |
| self.samples = samples | |
| def __getitem__(self, idx): | |
| return self.samples[idx] | |
| class RecognitionEnd2EndTableDataset(RecognitionTableDataset): | |
| def __init__(self, samples, table_format): | |
| self.pred_table_format = table_format | |
| self.samples = self.normalize_data(samples) | |
| def normalize_data(self, samples): | |
| img_id = 0 | |
| for sample in samples: | |
| p = sample['pred'] | |
| r = sample['gt'] | |
| p = normalized_table(p, self.pred_table_format) | |
| r = normalized_table(r) | |
| sample['norm_gt'] = r | |
| sample['norm_pred'] = p | |
| sample['img_id'] = sample['img_id'] if sample.get('img_id') else img_id | |
| img_id += 1 | |
| return samples | |