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  1. assets/task-areas.png +3 -0
  2. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/dev_eval.jsonl.gz +3 -0
  3. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/dev_eval_y.npy +3 -0
  4. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/eval_a_X.npy +3 -0
  5. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/eval_b_X.npy +3 -0
  6. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/eval_c_X.npy +3 -0
  7. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_a.jsonl.gz +3 -0
  8. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_a_X.npy +3 -0
  9. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_a_y.npy +3 -0
  10. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_b.jsonl.gz +3 -0
  11. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_b_X.npy +3 -0
  12. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_b_y.npy +3 -0
  13. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_c.jsonl.gz +3 -0
  14. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_c_X.npy +3 -0
  15. tasks/activeprune-al-unlabeled-pool-pruning/environment/app/data/pool_c_y.npy +3 -0
  16. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/final/eval_s0_X.npy +3 -0
  17. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/final/eval_s1_X.npy +3 -0
  18. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/final/eval_y.npy +3 -0
  19. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/intermediate/eval_s0_X.npy +3 -0
  20. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/intermediate/eval_s1_X.npy +3 -0
  21. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/intermediate/eval_y.npy +3 -0
  22. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/pools/pool_s0.jsonl.gz +3 -0
  23. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/pools/pool_s0_X.npy +3 -0
  24. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/pools/pool_s0_y.npy +3 -0
  25. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/pools/pool_s1.jsonl.gz +3 -0
  26. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/pools/pool_s1_X.npy +3 -0
  27. tasks/activeprune-al-unlabeled-pool-pruning/tests/hidden_data/pools/pool_s1_y.npy +3 -0
  28. tasks/budgeted-imputation-mcar50/environment/app/cellrunner.py +24 -0
  29. tasks/budgeted-imputation-mcar50/environment/app/cellspec.py +91 -0
  30. tasks/budgeted-imputation-mcar50/environment/app/data/dev/dev1.npz +3 -0
  31. tasks/budgeted-imputation-mcar50/environment/app/data/dev/dev2.npz +3 -0
  32. tasks/budgeted-imputation-mcar50/environment/app/data/dev/dev3.npz +3 -0
  33. tasks/budgeted-imputation-mcar50/environment/app/data/dev/dev4.npz +3 -0
  34. tasks/budgeted-imputation-mcar50/environment/app/data/dev/dev5.npz +3 -0
  35. tasks/budgeted-imputation-mcar50/environment/app/data/dev/dev6.npz +3 -0
  36. tasks/budgeted-imputation-mcar50/environment/app/data/dev/manifest.json +113 -0
  37. tasks/budgeted-imputation-mcar50/environment/app/devkit.py +156 -0
  38. tasks/budgeted-imputation-mcar50/environment/app/output/impute.py +11 -0
  39. tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f1.npz +3 -0
  40. tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f2.npz +3 -0
  41. tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f3.npz +3 -0
  42. tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f4.npz +3 -0
  43. tasks/budgeted-imputation-mcar50/tests/hidden_data/final/manifest.json +77 -0
  44. tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i1.npz +3 -0
  45. tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i2.npz +3 -0
  46. tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i3.npz +3 -0
  47. tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i4.npz +3 -0
  48. tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/manifest.json +77 -0
  49. tasks/causalrivers-heldout-station-graph-auroc/environment/Dockerfile +51 -0
  50. tasks/causalrivers-heldout-station-graph-auroc/environment/app/data/dev_a_edges.csv +491 -0
assets/task-areas.png ADDED

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tasks/budgeted-imputation-mcar50/environment/app/cellrunner.py ADDED
@@ -0,0 +1,24 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import sys
2
+
3
+ import numpy as np
4
+
5
+
6
+ def main() -> int:
7
+ in_path, out_path, module_dir = sys.argv[1], sys.argv[2], sys.argv[3]
8
+
9
+ with np.load(in_path, allow_pickle=False) as data:
10
+ X_train = np.ascontiguousarray(data["X_train"], dtype=np.float64)
11
+ X_eval = np.ascontiguousarray(data["X_eval"], dtype=np.float64)
12
+ seed = int(data["seed"][0])
13
+
14
+ sys.path.insert(0, module_dir)
15
+ import impute
16
+
17
+ result = impute.impute(X_train, X_eval, seed)
18
+
19
+ np.save(out_path, np.asarray(result), allow_pickle=False)
20
+ return 0
21
+
22
+
23
+ if __name__ == "__main__":
24
+ sys.exit(main())
tasks/budgeted-imputation-mcar50/environment/app/cellspec.py ADDED
@@ -0,0 +1,91 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ from __future__ import annotations
2
+
3
+ import numpy as np
4
+ from sklearn.preprocessing import QuantileTransformer
5
+
6
+ MISSING_RATE = 0.50
7
+
8
+ QT_N_QUANTILES = 1000
9
+ QT_SUBSAMPLE = 100_000
10
+ QT_RANDOM_STATE = 0
11
+
12
+
13
+ def build_cell(X, seed, n_train, n_eval):
14
+ """Build one cell from the raw feature matrix `X` (float64, no missing values).
15
+
16
+ Rows are permuted with `seed` and then *partitioned*: the first `n_train` rows of the
17
+ permutation become the training rows and the next `n_eval` become the evaluation rows,
18
+ so the two are disjoint by construction. Independent MCAR masks at MISSING_RATE are
19
+ drawn for each matrix from the same generator. A QuantileTransformer with a normal
20
+ output distribution is fitted on the *incomplete* training matrix and applied to both.
21
+
22
+ Returns (X_train, X_eval, X_eval_true, mask_eval):
23
+ X_train (n_train, d) float64, gaussianized, np.nan at masked entries
24
+ X_eval (n_eval, d) float64, gaussianized, np.nan at masked entries
25
+ X_eval_true (n_eval, d) float64, gaussianized, complete -- the ground truth
26
+ mask_eval (n_eval, d) bool, True where X_eval is missing
27
+ """
28
+ X = np.asarray(X, dtype=np.float64)
29
+ n_rows = X.shape[0]
30
+ if n_train + n_eval > n_rows:
31
+ raise ValueError(f"cell needs {n_train + n_eval} rows, matrix has {n_rows}")
32
+
33
+ rng = np.random.default_rng(seed)
34
+ perm = rng.permutation(n_rows)
35
+ rows_train = perm[:n_train]
36
+ rows_eval = perm[n_train : n_train + n_eval]
37
+
38
+ raw_train = X[rows_train]
39
+ raw_eval = X[rows_eval]
40
+
41
+ mask_train = rng.random(raw_train.shape) < MISSING_RATE
42
+ mask_eval = rng.random(raw_eval.shape) < MISSING_RATE
43
+
44
+ incomplete_train = raw_train.copy()
45
+ incomplete_train[mask_train] = np.nan
46
+
47
+ qt = QuantileTransformer(
48
+ output_distribution="normal",
49
+ n_quantiles=min(QT_N_QUANTILES, n_train),
50
+ subsample=QT_SUBSAMPLE,
51
+ random_state=QT_RANDOM_STATE,
52
+ copy=True,
53
+ )
54
+ qt.fit(incomplete_train)
55
+
56
+ X_train = np.ascontiguousarray(qt.transform(incomplete_train), dtype=np.float64)
57
+ X_eval_true = np.ascontiguousarray(qt.transform(raw_eval), dtype=np.float64)
58
+ X_eval = X_eval_true.copy()
59
+ X_eval[mask_eval] = np.nan
60
+
61
+ return X_train, X_eval, X_eval_true, mask_eval
62
+
63
+
64
+ def imputation_r2(X_pred, X_true, mask):
65
+ """Per-feature R^2 over masked entries, averaged unweighted over features.
66
+
67
+ For feature j, over the entries where `mask` is True:
68
+ R2_j = 1 - sum((true - pred)^2) / sum((true - mean(true))^2)
69
+ Features with fewer than two masked entries, or with a degenerate ground-truth
70
+ variance over those entries, are skipped. Returns the mean of the kept features.
71
+ """
72
+ X_pred = np.asarray(X_pred, dtype=np.float64)
73
+ X_true = np.asarray(X_true, dtype=np.float64)
74
+ mask = np.asarray(mask, dtype=bool)
75
+
76
+ scores = []
77
+ for j in range(X_true.shape[1]):
78
+ sel = mask[:, j]
79
+ if int(sel.sum()) < 2:
80
+ continue
81
+ truth = X_true[sel, j]
82
+ pred = X_pred[sel, j]
83
+ ss_tot = float(np.sum((truth - truth.mean()) ** 2))
84
+ if not np.isfinite(ss_tot) or ss_tot <= 1e-12:
85
+ continue
86
+ ss_res = float(np.sum((truth - pred) ** 2))
87
+ scores.append(1.0 - ss_res / ss_tot)
88
+
89
+ if not scores:
90
+ raise ValueError("no scorable feature in this cell")
91
+ return float(np.mean(scores))
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tasks/budgeted-imputation-mcar50/environment/app/data/dev/dev6.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:60bbe95c208a0799563a9ab497f1ddffcbe2e8c848c580694347771119b0ac35
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+ size 387428
tasks/budgeted-imputation-mcar50/environment/app/data/dev/manifest.json ADDED
@@ -0,0 +1,113 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "missing_rate": 0.5,
3
+ "datasets": [
4
+ {
5
+ "id": "dev1",
6
+ "file": "dev1.npz",
7
+ "source": "Bike_Sharing_Demand",
8
+ "n_rows": 16984,
9
+ "n_features": 6,
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+ "n_train": 10000,
11
+ "n_eval": 2500,
12
+ "seeds": [
13
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+ 71673,
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+ 56378,
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+ 80138,
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+ ]
21
+ },
22
+ {
23
+ "id": "dev2",
24
+ "file": "dev2.npz",
25
+ "source": "wine_quality",
26
+ "n_rows": 5318,
27
+ "n_features": 11,
28
+ "n_train": 4255,
29
+ "n_eval": 1063,
30
+ "seeds": [
31
+ 72644,
32
+ 86588,
33
+ 68686,
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+ 21963,
35
+ 30836,
36
+ 22644,
37
+ 36510
38
+ ]
39
+ },
40
+ {
41
+ "id": "dev3",
42
+ "file": "dev3.npz",
43
+ "source": "delays_zurich_transport",
44
+ "n_rows": 3526,
45
+ "n_features": 8,
46
+ "n_train": 2821,
47
+ "n_eval": 705,
48
+ "seeds": [
49
+ 72900,
50
+ 75973,
51
+ 28715,
52
+ 26999,
53
+ 60207,
54
+ 14546,
55
+ 49960
56
+ ]
57
+ },
58
+ {
59
+ "id": "dev4",
60
+ "file": "dev4.npz",
61
+ "source": "house_sales",
62
+ "n_rows": 20000,
63
+ "n_features": 15,
64
+ "n_train": 10000,
65
+ "n_eval": 2500,
66
+ "seeds": [
67
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68
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70
+ 75161,
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+ 14619,
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+ ]
75
+ },
76
+ {
77
+ "id": "dev5",
78
+ "file": "dev5.npz",
79
+ "source": "Brazilian_houses",
80
+ "n_rows": 10228,
81
+ "n_features": 8,
82
+ "n_train": 8183,
83
+ "n_eval": 2045,
84
+ "seeds": [
85
+ 79767,
86
+ 57676,
87
+ 30019,
88
+ 33717,
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+ 15457,
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91
+ 78038
92
+ ]
93
+ },
94
+ {
95
+ "id": "dev6",
96
+ "file": "dev6.npz",
97
+ "source": "Ailerons",
98
+ "n_rows": 13750,
99
+ "n_features": 33,
100
+ "n_train": 10000,
101
+ "n_eval": 2500,
102
+ "seeds": [
103
+ 74029,
104
+ 74447,
105
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+ 20736,
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+ 85855,
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+ 69837
110
+ ]
111
+ }
112
+ ]
113
+ }
tasks/budgeted-imputation-mcar50/environment/app/devkit.py ADDED
@@ -0,0 +1,156 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ from __future__ import annotations
2
+
3
+ import argparse
4
+ import json
5
+ import os
6
+ import subprocess
7
+ import sys
8
+ import tempfile
9
+ import time
10
+ from pathlib import Path
11
+
12
+ import numpy as np
13
+
14
+ sys.path.insert(0, str(Path(__file__).resolve().parent))
15
+
16
+ import cellspec
17
+
18
+ DEV_ROOT = Path("/app/data/dev")
19
+ DEFAULT_MODULE_DIR = Path("/app/output")
20
+ CELLRUNNER = Path(__file__).resolve().parent / "cellrunner.py"
21
+
22
+ CELL_BUDGET_SEC = 30.0
23
+
24
+
25
+ def manifest() -> dict:
26
+ with open(DEV_ROOT / "manifest.json") as fh:
27
+ return json.load(fh)
28
+
29
+
30
+ def _entry(dataset_id: str) -> dict:
31
+ for entry in manifest()["datasets"]:
32
+ if entry["id"] == dataset_id:
33
+ return entry
34
+ raise KeyError(f"unknown dev dataset {dataset_id!r}")
35
+
36
+
37
+ def load_dev_cell(dataset_id: str, seed_index: int = 0):
38
+ """Return (X_train, X_eval, X_eval_true, mask_eval) for one development cell."""
39
+ entry = _entry(dataset_id)
40
+ with np.load(DEV_ROOT / entry["file"], allow_pickle=False) as data:
41
+ X = np.ascontiguousarray(data["X"], dtype=np.float64)
42
+ return cellspec.build_cell(
43
+ X, int(entry["seeds"][seed_index]), entry["n_train"], entry["n_eval"]
44
+ )
45
+
46
+
47
+ def _score_cell(module_dir: Path, X_train, X_eval, X_eval_true, mask_eval, seed):
48
+ """Run the submitted module on one cell. Returns (score_or_None, reason, seconds)."""
49
+ env = dict(os.environ)
50
+ env.update(
51
+ {
52
+ "OMP_NUM_THREADS": "1",
53
+ "OPENBLAS_NUM_THREADS": "1",
54
+ "MKL_NUM_THREADS": "1",
55
+ "NUMEXPR_NUM_THREADS": "1",
56
+ "PYTHONSAFEPATH": "1",
57
+ }
58
+ )
59
+ with tempfile.TemporaryDirectory() as tmp:
60
+ env["TMPDIR"] = tmp
61
+ env["HOME"] = tmp
62
+ in_path = os.path.join(tmp, "in.npz")
63
+ out_path = os.path.join(tmp, "out.npy")
64
+ np.savez(in_path, X_train=X_train, X_eval=X_eval, seed=np.array([seed], dtype=np.int64))
65
+ argv = [sys.executable, str(CELLRUNNER), in_path, out_path, str(module_dir)]
66
+ started = time.monotonic()
67
+ try:
68
+ proc = subprocess.run(
69
+ argv,
70
+ cwd=tmp,
71
+ env=env,
72
+ capture_output=True,
73
+ text=True,
74
+ timeout=CELL_BUDGET_SEC,
75
+ start_new_session=True,
76
+ )
77
+ except subprocess.TimeoutExpired:
78
+ return None, "timeout", time.monotonic() - started
79
+ elapsed = time.monotonic() - started
80
+ if proc.returncode != 0:
81
+ tail = (proc.stderr or "").strip().splitlines()[-3:]
82
+ return None, "error: " + " | ".join(tail), elapsed
83
+ if not os.path.isfile(out_path):
84
+ return None, "no output", elapsed
85
+ try:
86
+ arr = np.load(out_path, allow_pickle=False)
87
+ except Exception as exc:
88
+ return None, f"unreadable output: {exc}", elapsed
89
+
90
+ if not isinstance(arr, np.ndarray) or arr.dtype.kind != "f":
91
+ return None, f"bad dtype {getattr(arr, 'dtype', type(arr))}", elapsed
92
+ if arr.shape != X_eval_true.shape:
93
+ return None, f"bad shape {arr.shape} != {X_eval_true.shape}", elapsed
94
+ arr = np.ascontiguousarray(arr, dtype=np.float64)
95
+ if not np.all(np.isfinite(arr)):
96
+ return None, "non-finite value returned", elapsed
97
+ return cellspec.imputation_r2(arr, X_eval_true, mask_eval), "ok", elapsed
98
+
99
+
100
+ def main() -> int:
101
+ ap = argparse.ArgumentParser(description="run the development panel")
102
+ ap.add_argument("--list", action="store_true", help="show the development datasets")
103
+ ap.add_argument("--datasets", default="", help="comma-separated dataset ids")
104
+ ap.add_argument("--seeds", default="", help="comma-separated seed indices")
105
+ ap.add_argument("--module", default=str(DEFAULT_MODULE_DIR), help="directory holding impute.py")
106
+ args = ap.parse_args()
107
+
108
+ entries = manifest()["datasets"]
109
+ if args.list:
110
+ print(f"{'id':6s} {'dataset':22s} {'rows':>6s} {'d':>4s} {'n_train':>8s} {'n_eval':>7s} seeds")
111
+ for e in entries:
112
+ print(
113
+ f"{e['id']:6s} {e['source']:22s} {e['n_rows']:6d} {e['n_features']:4d} "
114
+ f"{e['n_train']:8d} {e['n_eval']:7d} {len(e['seeds'])}"
115
+ )
116
+ return 0
117
+
118
+ wanted = [s for s in args.datasets.split(",") if s] or [e["id"] for e in entries]
119
+ module_dir = Path(args.module).resolve()
120
+ if not (module_dir / "impute.py").is_file():
121
+ print(f"no impute.py under {module_dir}", file=sys.stderr)
122
+ return 2
123
+
124
+ panel = []
125
+ print(f"{'dataset':10s} {'seed':>5s} {'seconds':>8s} R2")
126
+ for dataset_id in wanted:
127
+ entry = _entry(dataset_id)
128
+ indices = [int(s) for s in args.seeds.split(",") if s] or list(range(len(entry["seeds"])))
129
+ per_dataset = []
130
+ with np.load(DEV_ROOT / entry["file"], allow_pickle=False) as data:
131
+ X = np.ascontiguousarray(data["X"], dtype=np.float64)
132
+ for k in indices:
133
+ seed = int(entry["seeds"][k])
134
+ X_train, X_eval, X_eval_true, mask_eval = cellspec.build_cell(
135
+ X, seed, entry["n_train"], entry["n_eval"]
136
+ )
137
+ score, reason, elapsed = _score_cell(
138
+ module_dir, X_train, X_eval, X_eval_true, mask_eval, seed
139
+ )
140
+ shown = "0.0000 <- scored as zero: " + reason if score is None else f"{score:.4f}"
141
+ print(f"{dataset_id:10s} {k:5d} {elapsed:8.2f} {shown}")
142
+ per_dataset.append(0.0 if score is None else score)
143
+ if per_dataset:
144
+ spread = max(per_dataset) - min(per_dataset)
145
+ print(
146
+ f"{dataset_id:10s} {'mean':>5s} {'':>8s} {np.mean(per_dataset):.4f} "
147
+ f"(spread over seeds {spread:.4f})"
148
+ )
149
+ panel.extend(per_dataset)
150
+ if panel:
151
+ print(f"\npanel mean over {len(panel)} cells: {np.mean(panel):.4f}")
152
+ return 0
153
+
154
+
155
+ if __name__ == "__main__":
156
+ sys.exit(main())
tasks/budgeted-imputation-mcar50/environment/app/output/impute.py ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import numpy as np
2
+
3
+
4
+ def impute(X_train: np.ndarray, X_eval: np.ndarray, seed: int) -> np.ndarray:
5
+ column_mean = np.nanmean(X_train, axis=0)
6
+ column_mean = np.where(np.isfinite(column_mean), column_mean, 0.0)
7
+
8
+ filled = np.array(X_eval, dtype=np.float64, copy=True)
9
+ missing = ~np.isfinite(filled)
10
+ filled[missing] = np.take(column_mean, np.nonzero(missing)[1])
11
+ return filled
tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f1.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:e68dd964c4e46bec5afc0b8819a116b51cb939523fe1cf7ae682c124c2205f2b
3
+ size 181876
tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f2.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:6c3a6a036c1f061ee4d2b34603827d2ae7bfd775f0f1a33bd8dc7810bed5dbcf
3
+ size 356757
tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f3.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:4028d3f8b95401c61f15f872ee4c238c1b8b52c2ce1e1aa03ed5bb0e447008e2
3
+ size 249013
tasks/budgeted-imputation-mcar50/tests/hidden_data/final/f4.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:cce05c910e2dae3279fefced9ab946b8c32fe020cf695195c85ccd13212fdc7a
3
+ size 406677
tasks/budgeted-imputation-mcar50/tests/hidden_data/final/manifest.json ADDED
@@ -0,0 +1,77 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "missing_rate": 0.5,
3
+ "datasets": [
4
+ {
5
+ "id": "f1",
6
+ "file": "f1.npz",
7
+ "source": "nyc-taxi-green-dec-2016",
8
+ "n_rows": 20000,
9
+ "n_features": 9,
10
+ "n_train": 10000,
11
+ "n_eval": 2500,
12
+ "seeds": [
13
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14
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15
+ 50471,
16
+ 85394,
17
+ 72916,
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19
+ 89674
20
+ ]
21
+ },
22
+ {
23
+ "id": "f2",
24
+ "file": "f2.npz",
25
+ "source": "sulfur",
26
+ "n_rows": 10081,
27
+ "n_features": 6,
28
+ "n_train": 8065,
29
+ "n_eval": 2016,
30
+ "seeds": [
31
+ 71924,
32
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33
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34
+ 68457,
35
+ 59126,
36
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+ 64891
38
+ ]
39
+ },
40
+ {
41
+ "id": "f3",
42
+ "file": "f3.npz",
43
+ "source": "pol",
44
+ "n_rows": 14958,
45
+ "n_features": 26,
46
+ "n_train": 10000,
47
+ "n_eval": 2500,
48
+ "seeds": [
49
+ 86393,
50
+ 46146,
51
+ 13829,
52
+ 35670,
53
+ 27766,
54
+ 73616,
55
+ 10910
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+ ]
57
+ },
58
+ {
59
+ "id": "f4",
60
+ "file": "f4.npz",
61
+ "source": "houses",
62
+ "n_rows": 20000,
63
+ "n_features": 8,
64
+ "n_train": 10000,
65
+ "n_eval": 2500,
66
+ "seeds": [
67
+ 81584,
68
+ 86934,
69
+ 69383,
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+ 75427,
71
+ 29508,
72
+ 58091,
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+ 65785
74
+ ]
75
+ }
76
+ ]
77
+ }
tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i1.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:313809a73fdecbdca2c4b900ce7b304f9dcc222ef74dd3227d019785b1b5aeaf
3
+ size 260594
tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i2.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:d05f939518a062a7324825a01245e96eaaf4cb89208e6b4350a5572e5ebf39e1
3
+ size 1776544
tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i3.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:5391931965a1ca9bc6158d040fb01d116fc65095d59037fff919a8564d00108f
3
+ size 598120
tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/i4.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:7199a0a8bd799c3796d819a8c2560a8fef1cdd7ac73d6d4499f8e28197ff18f6
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+ size 654201
tasks/budgeted-imputation-mcar50/tests/hidden_data/intermediate/manifest.json ADDED
@@ -0,0 +1,77 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "missing_rate": 0.5,
3
+ "datasets": [
4
+ {
5
+ "id": "i1",
6
+ "file": "i1.npz",
7
+ "source": "medical_charges",
8
+ "n_rows": 20000,
9
+ "n_features": 3,
10
+ "n_train": 10000,
11
+ "n_eval": 2500,
12
+ "seeds": [
13
+ 43074,
14
+ 12214,
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+ 65534,
17
+ 77346,
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19
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+ ]
21
+ },
22
+ {
23
+ "id": "i2",
24
+ "file": "i2.npz",
25
+ "source": "house_16H",
26
+ "n_rows": 20000,
27
+ "n_features": 16,
28
+ "n_train": 10000,
29
+ "n_eval": 2500,
30
+ "seeds": [
31
+ 62882,
32
+ 71288,
33
+ 87104,
34
+ 63866,
35
+ 45874,
36
+ 19984,
37
+ 58949
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+ ]
39
+ },
40
+ {
41
+ "id": "i3",
42
+ "file": "i3.npz",
43
+ "source": "yprop_4_1",
44
+ "n_rows": 8774,
45
+ "n_features": 42,
46
+ "n_train": 7020,
47
+ "n_eval": 1754,
48
+ "seeds": [
49
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50
+ 81716,
51
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52
+ 87336,
53
+ 15985,
54
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55
+ 83425
56
+ ]
57
+ },
58
+ {
59
+ "id": "i4",
60
+ "file": "i4.npz",
61
+ "source": "MiamiHousing2016",
62
+ "n_rows": 13922,
63
+ "n_features": 13,
64
+ "n_train": 10000,
65
+ "n_eval": 2500,
66
+ "seeds": [
67
+ 73817,
68
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69
+ 68746,
70
+ 83796,
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+ 16590,
72
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+ ]
75
+ }
76
+ ]
77
+ }
tasks/causalrivers-heldout-station-graph-auroc/environment/Dockerfile ADDED
@@ -0,0 +1,51 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ FROM --platform=linux/amd64 public.ecr.aws/docker/library/python:3.13-slim-bookworm@sha256:01f42367a0a94ad4bc17111776fd66e3500c1d87c15bbd6055b7371d39c124fb
2
+
3
+ RUN set -eu; \
4
+ if [ ! -s /etc/ssl/certs/ca-certificates.crt ]; then \
5
+ apt-get update && apt-get install -y --no-install-recommends ca-certificates=20230311+deb12u1; \
6
+ fi; \
7
+ rm -f /tmp/hz-prereq.list; \
8
+ echo 'deb [signed-by=/usr/share/keyrings/debian-archive-keyring.gpg] https://snapshot.debian.org/archive/debian/20260801T000000Z bookworm main' >> /tmp/hz-prereq.list; \
9
+ echo 'deb [signed-by=/usr/share/keyrings/debian-archive-keyring.gpg] https://snapshot.debian.org/archive/debian-security/20260801T000000Z bookworm-security main' >> /tmp/hz-prereq.list; \
10
+ apt-get -o Dir::Etc::sourcelist=/tmp/hz-prereq.list -o Dir::Etc::sourceparts=/dev/null -o Acquire::Check-Valid-Until=false update; \
11
+ apt-get -o Dir::Etc::sourcelist=/tmp/hz-prereq.list -o Dir::Etc::sourceparts=/dev/null -o Acquire::Check-Valid-Until=false install -y --no-install-recommends tmux=3.3a-3 asciinema=2.2.0-1 git=1:2.39.5-0+deb12u3; \
12
+ rm -f /tmp/hz-prereq.list; rm -rf /var/lib/apt/lists/*
13
+
14
+
15
+ ENTRYPOINT []
16
+ ENV DEBIAN_FRONTEND=noninteractive \
17
+ PYTHONHASHSEED=0 \
18
+ PIP_NO_CACHE_DIR=1 \
19
+ PIP_DISABLE_PIP_VERSION_CHECK=1 \
20
+ OMP_NUM_THREADS=1 \
21
+ MKL_NUM_THREADS=1 \
22
+ OPENBLAS_NUM_THREADS=1 \
23
+ NUMEXPR_NUM_THREADS=1
24
+
25
+ RUN git config --system user.email "agent@localhost" \
26
+ && git config --system user.name "agent"
27
+
28
+ RUN useradd --create-home --uid 1001 agent
29
+
30
+ COPY ./requirements.txt /tmp/requirements.txt
31
+ RUN /usr/local/bin/python3 -m pip install --no-cache-dir -r /tmp/requirements.txt \
32
+ && rm /tmp/requirements.txt
33
+
34
+ COPY ./materialize_data.py /tmp/materialize_data.py
35
+ COPY ./shards /tmp/shards
36
+ RUN /usr/local/bin/python3 /tmp/materialize_data.py /tmp/shards /app/data \
37
+ && chown -R agent:agent /app \
38
+ && find /app -exec touch -d @1700000000 {} + \
39
+ && rm -rf /tmp/shards /tmp/materialize_data.py
40
+
41
+ WORKDIR /app
42
+ COPY --chown=agent:agent ./app /app
43
+
44
+ RUN mkdir -p /app/output \
45
+ && chown agent:agent /app /app/output \
46
+ && find /app ! -name '*.npy' -exec touch -d @1700000000 {} +
47
+
48
+ ENV HF_HUB_OFFLINE=1
49
+ ENV TRANSFORMERS_OFFLINE=1
50
+
51
+ USER agent
tasks/causalrivers-heldout-station-graph-auroc/environment/app/data/dev_a_edges.csv ADDED
@@ -0,0 +1,491 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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