| [2026-09-04 11:52:08] queue out/queue/deeper_mnist.txt started, pid 14662 |
| [2026-09-04 11:52:08] waiting: load 3.69, other jobs: 13135 |
| [2026-09-04 12:02:09] waiting: load 3.19, other jobs: 13135 |
| [2026-09-04 12:12:09] waiting: load 2.35, other jobs: 13135 |
| [2026-09-04 12:22:10] waiting: load 2.34, other jobs: |
| [2026-09-04 12:23:10] idle after 1860s |
| [2026-09-04 12:23:10] start [1]: .venv/bin/python scripts/train_paper_mlp.py --steps 300 --hidden-layers 6 --out /private/tmp/claude-501/-Users-brianna-Cells-Developmental/75a5e546-8113-4317-8480-640996d23041/scratchpad/smoke_paper |
| [12:23:12] 12 checkpoints to 300 steps on 1000 digits, depth 7 (6 hidden layers) |
| [12:23:12] plain-h6 step 0: train 0.103 test 0.101 mse 1.055e-01 (1s) |
| [12:23:13] plain-h6 step 100: train 0.995 test 0.892 mse 3.824e-03 (1s) |
| [12:23:14] plain-h6 step 300: train 1.000 test 0.890 mse 4.179e-05 (2s) |
| [12:23:14] plain-h6: wrote 12 checkpoints; train 1.000 test 0.890 (3s) |
| [12:23:14] res-h6 step 0: train 0.142 test 0.141 mse 1.789e-01 (0s) |
| [12:23:15] res-h6 step 100: train 1.000 test 0.914 mse 3.125e-03 (1s) |
| [12:23:16] res-h6 step 300: train 1.000 test 0.912 mse 1.236e-04 (1s) |
| [12:23:16] res-h6: wrote 12 checkpoints; train 1.000 test 0.912 (2s) |
| [2026-09-04 12:23:17] exit [1]: status 0 after 7s |
| [2026-09-04 12:23:17] start [2]: .venv/bin/python scripts/train_mnist_dense.py --steps 300 --blocks 6 --out /private/tmp/claude-501/-Users-brianna-Cells-Developmental/75a5e546-8113-4317-8480-640996d23041/scratchpad/smoke_dense |
| [12:23:18] 12 checkpoints to 300 steps, 6 blocks of width 256, writing to /private/tmp/claude-501/-Users-brianna-Cells-Developmental/75a5e546-8113-4317-8480-640996d23041/scratchpad/smoke_dense |
| [12:23:19] step 0 test 0.0856 train CE 2.364e+00 (1s) |
| [12:23:19] step 1 test 0.1091 train CE 2.295e+00 (1s) |
| [12:23:20] step 2 test 0.2030 train CE 2.178e+00 (2s) |
| [12:23:20] step 3 test 0.3997 train CE 2.026e+00 (2s) |
| [12:23:21] step 6 test 0.6331 train CE 1.531e+00 (3s) |
| [12:23:21] step 10 test 0.7235 train CE 1.023e+00 (3s) |
| [12:23:21] step 18 test 0.8336 train CE 5.954e-01 (4s) |
| [12:23:22] step 32 test 0.8769 train CE 4.473e-01 (4s) |
| [12:23:22] step 56 test 0.8935 train CE 3.861e-01 (5s) |
| [12:23:23] step 100 test 0.8996 train CE 3.566e-01 (5s) |
| [12:23:24] step 178 test 0.9119 train CE 3.218e-01 (6s) |
| [12:23:25] step 300 test 0.9122 train CE 3.148e-01 (7s) |
| wrote 12 checkpoints to /private/tmp/claude-501/-Users-brianna-Cells-Developmental/75a5e546-8113-4317-8480-640996d23041/scratchpad/smoke_dense |
| [2026-09-04 12:23:27] exit [2]: status 0 after 10s |
| [2026-09-04 12:23:27] start [3]: .venv/bin/python scripts/train_paper_mlp.py --hidden-layers 4 |
| [12:23:28] 41 checkpoints to 100200 steps on 1000 digits, depth 5 (4 hidden layers) |
| [12:23:28] plain-h4 step 0: train 0.107 test 0.096 mse 1.013e-01 (1s) |
| [12:23:29] plain-h4 step 100: train 0.996 test 0.910 mse 3.504e-03 (1s) |
| [12:23:36] plain-h4 step 3000: train 1.000 test 0.909 mse 2.350e-06 (8s) |
| [12:24:37] plain-h4 step 30000: train 1.000 test 0.893 mse 1.819e-06 (70s) |
| [12:27:15] plain-h4 step 100200: train 1.000 test 0.882 mse 2.092e-09 (227s) |
| [12:27:16] plain-h4: wrote 41 checkpoints; train 1.000 test 0.882 (229s) |
| [12:27:16] res-h4 step 0: train 0.105 test 0.097 mse 1.157e-01 (0s) |
| [12:27:17] res-h4 step 100: train 1.000 test 0.913 mse 3.053e-03 (1s) |
| [12:27:25] res-h4 step 3000: train 1.000 test 0.914 mse 1.595e-04 (9s) |
| [12:28:37] res-h4 step 30000: train 1.000 test 0.866 mse 4.458e-06 (81s) |
| [12:32:30] res-h4 step 100200: train 0.999 test 0.814 mse 1.995e-04 (314s) |
| [12:32:32] res-h4: wrote 41 checkpoints; train 0.999 test 0.814 (316s) |
| [2026-09-04 12:32:32] exit [3]: status 0 after 545s |
| [2026-09-04 12:32:32] waiting: load 2.50, other jobs: |
| [2026-09-04 12:37:51] queue out/queue/deeper_mnist_rest.txt started, pid 16287 |
| [2026-09-04 12:37:51] start [1]: .venv/bin/python scripts/train_paper_mlp.py --hidden-layers 5 |
| [12:37:53] 41 checkpoints to 100200 steps on 1000 digits, depth 6 (5 hidden layers) |
| [12:37:54] plain-h5 step 0: train 0.080 test 0.085 mse 1.085e-01 (1s) |
| [12:37:55] plain-h5 step 100: train 0.993 test 0.900 mse 4.220e-03 (2s) |
| [12:38:05] plain-h5 step 3000: train 1.000 test 0.901 mse 5.822e-06 (11s) |
| [12:39:23] plain-h5 step 30000: train 1.000 test 0.896 mse 1.084e-07 (89s) |
| [12:42:53] plain-h5 step 100200: train 1.000 test 0.896 mse 8.453e-08 (300s) |
| [12:42:55] plain-h5: wrote 41 checkpoints; train 1.000 test 0.896 (302s) |
| [12:42:55] res-h5 step 0: train 0.083 test 0.084 mse 1.539e-01 (0s) |
| [12:42:56] res-h5 step 100: train 0.999 test 0.907 mse 3.371e-03 (1s) |
| [12:43:07] res-h5 step 3000: train 1.000 test 0.908 mse 6.232e-05 (12s) |
| [12:44:43] res-h5 step 30000: train 0.999 test 0.861 mse 1.733e-04 (108s) |
| [12:48:45] res-h5 step 100200: train 0.998 test 0.840 mse 2.984e-04 (350s) |
| [12:48:47] res-h5: wrote 41 checkpoints; train 0.998 test 0.840 (352s) |
| [2026-09-04 12:48:48] exit [1]: status 0 after 657s |
| [2026-09-04 12:48:48] start [2]: .venv/bin/python scripts/train_paper_mlp.py --hidden-layers 6 |
| [12:48:49] 41 checkpoints to 100200 steps on 1000 digits, depth 7 (6 hidden layers) |
| [12:48:50] plain-h6 step 0: train 0.103 test 0.101 mse 1.055e-01 (1s) |
| [12:48:51] plain-h6 step 100: train 0.995 test 0.892 mse 3.824e-03 (1s) |
| [12:49:00] plain-h6 step 3000: train 1.000 test 0.908 mse 3.052e-06 (11s) |
| [12:50:23] plain-h6 step 30000: train 1.000 test 0.899 mse 9.366e-08 (94s) |
| [12:53:54] plain-h6 step 100200: train 1.000 test 0.895 mse 2.648e-07 (305s) |
| [12:53:56] plain-h6: wrote 41 checkpoints; train 1.000 test 0.895 (306s) |
| [12:53:56] res-h6 step 0: train 0.142 test 0.141 mse 1.789e-01 (0s) |
| [12:53:57] res-h6 step 100: train 1.000 test 0.914 mse 3.125e-03 (1s) |
| [12:54:07] res-h6 step 3000: train 1.000 test 0.910 mse 1.573e-05 (12s) |
| [12:55:40] res-h6 step 30000: train 1.000 test 0.871 mse 3.015e-07 (104s) |
| [13:00:17] res-h6 step 100200: train 0.998 test 0.838 mse 3.961e-04 (382s) |
| [13:00:19] res-h6: wrote 41 checkpoints; train 0.998 test 0.838 (384s) |
| [2026-09-04 13:00:20] exit [2]: status 0 after 692s |
| [2026-09-04 13:00:20] start [3]: .venv/bin/python scripts/train_mnist_dense.py --blocks 5 |
| [13:00:22] 23 checkpoints to 177828 steps, 5 blocks of width 256, writing to /Users/brianna/Cells_Developmental/out/mnist_dense-b5 |
| [13:00:23] step 0 test 0.0859 train CE 2.387e+00 (1s) |
| [13:00:23] step 1 test 0.1076 train CE 2.326e+00 (1s) |
| [13:00:23] step 2 test 0.1797 train CE 2.219e+00 (2s) |
| [13:00:24] step 3 test 0.3101 train CE 2.075e+00 (2s) |
| [13:00:24] step 6 test 0.6090 train CE 1.576e+00 (3s) |
| [13:00:25] step 10 test 0.7255 train CE 1.044e+00 (3s) |
| [13:00:25] step 18 test 0.8147 train CE 6.254e-01 (4s) |
| [13:00:25] step 32 test 0.8735 train CE 4.559e-01 (4s) |
| [13:00:26] step 56 test 0.8935 train CE 3.898e-01 (4s) |
| [13:00:27] step 100 test 0.9010 train CE 3.592e-01 (5s) |
| [13:00:27] step 178 test 0.9098 train CE 3.237e-01 (6s) |
| [13:00:28] step 316 test 0.9052 train CE 3.218e-01 (7s) |
| [13:00:29] step 562 test 0.9128 train CE 2.958e-01 (8s) |
| [13:00:31] step 1000 test 0.9267 train CE 2.548e-01 (10s) |
| [13:00:34] step 1778 test 0.9419 train CE 1.872e-01 (13s) |
| [13:00:39] step 3162 test 0.9611 train CE 1.056e-01 (18s) |
| [13:00:48] step 5623 test 0.9704 train CE 4.883e-02 (26s) |
| [13:01:03] step 10000 test 0.9776 train CE 9.789e-03 (41s) |
| [13:01:29] step 17783 test 0.9804 train CE 6.703e-04 (68s) |
| [13:02:17] step 31623 test 0.9798 train CE 2.263e-04 (116s) |
| [13:03:41] step 56234 test 0.9801 train CE 9.273e-05 (200s) |
| [13:06:08] step 100000 test 0.9803 train CE 4.118e-05 (346s) |
| [13:10:28] step 177828 test 0.9803 train CE 1.913e-05 (607s) |
| wrote 23 checkpoints to /Users/brianna/Cells_Developmental/out/mnist_dense-b5 |
| [2026-09-04 13:10:32] exit [3]: status 0 after 612s |
| [2026-09-04 13:10:32] start [4]: .venv/bin/python scripts/train_mnist_dense.py --blocks 6 |
| [13:10:33] 23 checkpoints to 177828 steps, 6 blocks of width 256, writing to /Users/brianna/Cells_Developmental/out/mnist_dense-b6 |
| [13:10:34] step 0 test 0.0856 train CE 2.364e+00 (1s) |
| [13:10:34] step 1 test 0.1091 train CE 2.295e+00 (2s) |
| [13:10:35] step 2 test 0.2030 train CE 2.178e+00 (2s) |
| [13:10:35] step 3 test 0.3997 train CE 2.026e+00 (3s) |
| [13:10:36] step 6 test 0.6331 train CE 1.531e+00 (3s) |
| [13:10:37] step 10 test 0.7235 train CE 1.023e+00 (4s) |
| [13:10:38] step 18 test 0.8336 train CE 5.954e-01 (5s) |
| [13:10:38] step 32 test 0.8769 train CE 4.473e-01 (5s) |
| [13:10:39] step 56 test 0.8935 train CE 3.861e-01 (6s) |
| [13:10:40] step 100 test 0.8996 train CE 3.566e-01 (7s) |
| [13:10:40] step 178 test 0.9119 train CE 3.218e-01 (8s) |
| [13:10:41] step 316 test 0.9058 train CE 3.207e-01 (9s) |
| [13:10:43] step 562 test 0.9133 train CE 2.964e-01 (10s) |
| [13:10:45] step 1000 test 0.9250 train CE 2.562e-01 (12s) |
| [13:10:49] step 1778 test 0.9416 train CE 1.892e-01 (16s) |
| [13:10:55] step 3162 test 0.9595 train CE 1.087e-01 (22s) |
| [13:11:05] step 5623 test 0.9704 train CE 4.865e-02 (32s) |
| [13:11:21] step 10000 test 0.9792 train CE 7.441e-03 (49s) |
| [13:11:51] step 17783 test 0.9803 train CE 6.737e-04 (78s) |
| [13:12:42] step 31623 test 0.9804 train CE 2.270e-04 (130s) |
| [13:14:12] step 56234 test 0.9810 train CE 9.301e-05 (219s) |
| [13:16:51] step 100000 test 0.9807 train CE 4.133e-05 (379s) |
| [13:21:43] step 177828 test 0.9807 train CE 1.919e-05 (670s) |
| wrote 23 checkpoints to /Users/brianna/Cells_Developmental/out/mnist_dense-b6 |
| [2026-09-04 13:21:47] exit [4]: status 0 after 675s |
| [2026-09-04 13:21:47] queue finished: 4 commands |
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