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476afc0 207a1a1 476afc0 207a1a1 25f4255 207a1a1 476afc0 207a1a1 25f4255 207a1a1 476afc0 207a1a1 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 | from __future__ import annotations
import argparse
import json
from pathlib import Path
from typing import Iterable
CONFIG_NAME = "release_config.json"
DEFAULT_MANIFEST_EXCLUDE_DIRS = {
".cache",
".git",
".ipynb_checkpoints",
".pytest_cache",
"__pycache__",
"essd",
"essd_scripts",
"eval_events",
"eval_picks",
"eval_snr",
"figures",
"notebooks",
"paired_eval_all",
"paired_eval_full_pnsn_v3_diff",
"paired_eval_mini",
"paired_eval_mini_station_windows",
"publish_mini",
"temp",
}
DEFAULT_MANIFEST_EXCLUDE_NAMES = {
".DS_Store",
"manifest_filesizes.tsv",
"manifest_sha256.txt",
}
DEFAULT_MANIFEST_EXCLUDE_PREFIXES = (
"._",
"overleaf-",
"paired_eval",
)
DEFAULT_MANIFEST_EXCLUDE_SUFFIXES = {
".aux",
".doc",
".docx",
".log",
".out",
".pdf",
".pyc",
".tex",
".zip",
}
def find_release_root(start: str | Path | None = None) -> Path:
current = Path(start or Path.cwd()).resolve()
if current.is_file():
current = current.parent
for path in (current, *current.parents):
if (path / CONFIG_NAME).is_file():
return path
raise FileNotFoundError(f"Could not find {CONFIG_NAME} from {current}")
def load_config(config_path: str | Path | None = None) -> tuple[Path, dict]:
if config_path is None:
root = find_release_root()
path = root / CONFIG_NAME
else:
path = Path(config_path).resolve()
root = path.parent
with path.open("r", encoding="utf-8") as f:
config = json.load(f)
return root, config
def manifest_paths(root: Path, config: dict, *, code_only: bool = False) -> list[str]:
manifest = config.get("upload_manifest", "upload_manifest.txt")
selected: list[str] = []
if code_only:
prefixes = tuple(config.get("code_prefixes", ["scripts/", "utils/"]))
selected.extend(
rel
for p in root.rglob("*")
if p.is_file()
for rel in [p.relative_to(root).as_posix()]
if rel.startswith(prefixes) and should_include_in_code_package(p, root, config)
)
selected.extend(
[CONFIG_NAME, "requirements.txt", manifest]
+ list(config.get("integrity_manifests", []))
)
return sorted(dict.fromkeys(selected))
manifest_path = root / manifest
if not manifest_path.is_file():
raise FileNotFoundError(f"Manifest not found: {manifest_path}")
for raw in manifest_path.read_text(encoding="utf-8").splitlines():
line = raw.strip()
if not line or line.startswith("#"):
continue
selected.append(line)
return sorted(dict.fromkeys(selected))
def should_include_in_upload_manifest(path: Path, root: Path, config: dict) -> bool:
rel = path.relative_to(root)
parts = rel.parts
name = path.name
exclude_dirs = set(DEFAULT_MANIFEST_EXCLUDE_DIRS)
exclude_dirs.update(config.get("manifest_exclude_dirs", []))
exclude_names = set(DEFAULT_MANIFEST_EXCLUDE_NAMES)
exclude_names.update(config.get("manifest_exclude_names", []))
exclude_prefixes = tuple(DEFAULT_MANIFEST_EXCLUDE_PREFIXES) + tuple(
config.get("manifest_exclude_prefixes", [])
)
exclude_suffixes = set(DEFAULT_MANIFEST_EXCLUDE_SUFFIXES)
exclude_suffixes.update(config.get("manifest_exclude_suffixes", []))
if any(part in exclude_dirs for part in parts):
return False
if parts and parts[0].startswith(exclude_prefixes):
return False
if name in exclude_names or name.startswith(exclude_prefixes):
return False
if path.suffix in exclude_suffixes:
return False
return True
def should_include_in_code_package(path: Path, root: Path, config: dict) -> bool:
"""Keep manuscript source code while excluding generated paper artifacts."""
rel = path.relative_to(root)
if not rel.parts or rel.parts[0] != "essd_scripts":
return should_include_in_upload_manifest(path, root, config)
if any(part in {"__pycache__", "outputs"} for part in rel.parts):
return False
if path.name in DEFAULT_MANIFEST_EXCLUDE_NAMES:
return False
if path.name.startswith(DEFAULT_MANIFEST_EXCLUDE_PREFIXES):
return False
return path.suffix not in DEFAULT_MANIFEST_EXCLUDE_SUFFIXES
def build_upload_manifest(root: Path, config: dict) -> list[str]:
selected = []
for path in root.rglob("*"):
if path.is_file() and should_include_in_upload_manifest(path, root, config):
selected.append(path.relative_to(root).as_posix())
return sorted(dict.fromkeys(selected))
def existing_files(root: Path, paths: Iterable[str]) -> list[tuple[str, Path]]:
out: list[tuple[str, Path]] = []
missing: list[str] = []
for rel in paths:
path = root / rel
if path.is_file():
out.append((rel, path))
else:
missing.append(rel)
if missing:
raise FileNotFoundError("Missing manifest files:\n" + "\n".join(missing))
return out
def parser(description: str) -> argparse.ArgumentParser:
p = argparse.ArgumentParser(description=description)
p.add_argument("--config", default=None, help="Path to release_config.json")
p.add_argument("--repo-id", default=None, help="Override destination repo id")
p.add_argument("--dry-run", action="store_true", help="Print files without uploading")
p.add_argument("--code-only", action="store_true", help="Upload only scripts, utils, config, and manifest")
return p
def main() -> None:
p = argparse.ArgumentParser(description="Build the canonical release upload manifest")
p.add_argument("--config", default=None, help="Path to release_config.json")
p.add_argument("--write", action="store_true", help="Write upload_manifest.txt instead of printing paths")
args = p.parse_args()
root, config = load_config(args.config)
paths = build_upload_manifest(root, config)
if args.write:
manifest = root / config.get("upload_manifest", "upload_manifest.txt")
manifest.write_text("\n".join(paths) + "\n", encoding="utf-8")
print(f"wrote {manifest} ({len(paths)} files)")
else:
print("\n".join(paths))
if __name__ == "__main__":
main()
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