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code-review-graph
tests/fixtures/sample_map_dispatch.py
.py
# Fixture for testing REFERENCES edge extraction in Python map dispatch patterns. def handle_create(data): print("create", data) def handle_update(data): print("update", data) def handle_delete(data): print("delete", data) def validate_input(data): return data is not None def process_data(data...
48
838
code-review-graph
scripts/render_pr_comment.py
.py
#!/usr/bin/env python3 """Render a risk-scored PR comment from ``code-review-graph detect-changes`` JSON. Reads the JSON document printed by ``code-review-graph detect-changes --base <ref>`` (the full, non ``--brief`` output) and emits GitHub-flavoured markdown suitable for a sticky pull-request comment. Also implemen...
389
13,054
code-review-graph
scripts/diagnose_pypi_connectivity.py
.py
#!/usr/bin/env python3 """Check whether this Python can reach PyPI (same path pip/pipx use for hatchling, etc.). If TLS to pypi.org fails (e.g. Errno 9 in some IDE terminals), a user-wide install from a git checkout may still work via uv (different downloader): uv tool install /path/to/code-review-graph --force Ru...
64
2,012
code-review-graph
code_review_graph/wiki.py
.py
"""Wiki generation from community structure. Generates markdown pages for each detected community and an index page, providing a navigable documentation wiki for the codebase architecture. """ from __future__ import annotations import logging import re import sqlite3 import unicodedata from collections import Counte...
309
10,610
code-review-graph
code_review_graph/graph_diff.py
.py
"""Graph snapshot diffing -- compare graph state over time.""" from __future__ import annotations import json import logging from pathlib import Path from typing import Any from .graph import GraphStore logger = logging.getLogger(__name__) def take_snapshot(store: GraphStore) -> dict[str, Any]: """Take a snap...
123
3,628
code-review-graph
code_review_graph/uninstall.py
.py
"""Safely reverse artifacts created by :mod:`code_review_graph.skills`. The original implementation was contributed by Stephen Cheng in PR #491. This current-main replacement keeps that command/report design while deriving the live MCP inventory from ``skills.PLATFORMS`` and treating every shared file as user-owned da...
1,319
42,021
code-review-graph
code_review_graph/forget.py
.py
"""Forget parsed files from the graph while keeping every derived layer sane. Dropping a file's own nodes and edges is not enough to match the graph a full rebuild without that file would produce: * surviving files that referenced it keep dangling, still-qualified edges (a call resolved to ``other.py::helper`` stay...
175
7,071
code-review-graph
code_review_graph/migrations.py
.py
"""Schema migration framework for the code-review-graph SQLite database. Manages incremental schema changes via versioned migration functions. Each migration is idempotent (uses IF NOT EXISTS / column existence checks). """ from __future__ import annotations import logging import sqlite3 from typing import Callable ...
285
9,970
code-review-graph
code_review_graph/main.py
.py
"""MCP server entry point for Code Review Graph. Run as: code-review-graph serve Communicates via stdio (standard MCP transport), or use ``code-review-graph serve --http`` for Streamable HTTP on localhost (port 5555 by default). The HTTP transport validates ``Host`` and ``Origin`` so the loopback endpoint cannot be dr...
1,173
43,653
code-review-graph
code_review_graph/changes.py
.py
"""Change impact analysis for code review. Maps git/svn diffs to affected functions, flows, communities, and test coverage gaps. Produces risk-scored, priority-ordered review guidance. """ from __future__ import annotations import logging import os import re import subprocess from pathlib import Path from typing imp...
532
19,115
code-review-graph
code_review_graph/temporal_resolver.py
.py
"""Post-build Temporal workflow/activity call resolver. After tree-sitter parsing, Java CALLS edges whose target is a bare method name carry ``extra.receiver`` naming the local variable called on. This module resolves those receivers through the TEMPORAL_STUB map to their declared Temporal interface type, then option...
205
8,267
code-review-graph
code_review_graph/analysis.py
.py
"""Graph analysis: hub detection, bridge nodes, knowledge gaps, surprise scoring, suggested questions.""" from __future__ import annotations import logging from collections import Counter, defaultdict from .graph import GraphStore, _sanitize_name logger = logging.getLogger(__name__) def find_hub_nodes(store: Grap...
411
13,248
code-review-graph
code_review_graph/http_origin_guard.py
.py
"""Host/Origin validation for the opt-in ``serve --http`` MCP endpoint. ``code-review-graph serve --http`` starts a FastMCP streamable-http server bound to loopback (127.0.0.1:5555 by default). A loopback bind is not by itself an access control for a browser: a page the user visits can point a hostname it controls at ...
213
7,417
code-review-graph
code_review_graph/config_keys.py
.py
"""Shared, value-free handling for Spring configuration property keys.""" from __future__ import annotations import re from pathlib import Path _SPRING_CONFIG_NAME = re.compile( r"^application(?:-[A-Za-z0-9_.-]+)?\.(?:properties|ya?ml)$", re.IGNORECASE, ) def is_spring_config_path(path: Path) -> bool: ...
34
1,235
code-review-graph
code_review_graph/event_resolver.py
.py
"""Resolve Spring application-event publishers to package-matched listeners.""" from __future__ import annotations import json import logging from typing import TYPE_CHECKING from .parser import EdgeInfo, NodeInfo if TYPE_CHECKING: from .graph import GraphStore logger = logging.getLogger(__name__) _EVENT_NODE...
123
4,329
code-review-graph
code_review_graph/jedi_resolver.py
.py
"""Post-build Jedi enrichment for Python call resolution. After tree-sitter parsing, many method calls on lowercase-receiver variables are dropped (e.g. ``svc.authenticate()`` where ``svc = factory()``). Jedi can resolve these by tracing return types across files. This module runs as a post-build step: it re-walks P...
304
10,560
code-review-graph
code_review_graph/visualization.py
.py
"""Interactive D3.js graph visualization for code knowledge graphs. Exports graph data to JSON and generates a self-contained HTML file with a force-directed D3.js visualization. Dark theme, zoomable, draggable, with collapsible file clusters, tooltips, legend, and stats bar. Supports multiple rendering modes for lar...
2,356
104,432
code-review-graph
code_review_graph/refactor.py
.py
"""Graph-powered refactoring operations. Provides rename previews, dead code detection, refactoring suggestions, and safe application of refactoring edits to source files. All file writes go through a preview-then-apply workflow with expiry enforcement and path traversal prevention. """ from __future__ import annotat...
890
36,357
code-review-graph
code_review_graph/tsconfig_resolver.py
.py
"""TypeScript tsconfig.json / jsconfig.json path alias resolver. Resolves TypeScript path aliases (e.g., ``@/ -> src/``) declared in ``compilerOptions.paths`` so that ``IMPORTS_FROM`` edges can point to real file paths instead of raw alias strings. Plain-JS projects (Vue, Nuxt, Vite) declare the same aliases in ``jsco...
267
9,647
code-review-graph
code_review_graph/postprocessing.py
.py
"""Shared post-build processing pipeline. After the core Tree-sitter parse (full_build or incremental_update), five post-processing steps must run to populate derived tables: 1. Resolve evidence-backed bare edge endpoints 2. Compute node signatures 3. Rebuild FTS5 search index 4. Trace execution flows 5. Detect code ...
204
6,391
code-review-graph
code_review_graph/__main__.py
.py
"""Allow running as: python -m code_review_graph""" from .cli import main main()
5
82
code-review-graph
code_review_graph/__init__.py
.py
"""Code Review Graph - MCP server for persistent incremental code knowledge graphs.""" from .context_savings import ( attach_context_savings, estimate_context_savings, estimate_file_tokens, estimate_tokens, format_context_savings, ) __version__ = "2.3.7" __all__ = [ "__version__", "attach...
21
454
code-review-graph
code_review_graph/token_benchmark.py
.py
"""Token reduction benchmark -- measures graph query efficiency vs naive file reading.""" from __future__ import annotations import logging import sqlite3 from pathlib import Path from typing import Any from .graph import GraphStore from .search import hybrid_search logger = logging.getLogger(__name__) # Sample qu...
126
4,096
code-review-graph
code_review_graph/embeddings.py
.py
"""Vector embedding support for semantic code search. Supports multiple providers: 1. Local (sentence-transformers) - Private, fast, offline. 2. Google Gemini - High-quality, cloud-based. Requires explicit opt-in. 3. MiniMax (embo-01) - High-quality 1536-dim cloud embeddings. Requires MINIMAX_API_KEY. 4. OpenAI-compat...
1,424
55,820
code-review-graph
code_review_graph/hints.py
.py
"""Context-aware hints system for MCP tool responses. Tracks session state (in-memory only) and generates intelligent next-step suggestions after each tool call. Hints are appended as ``_hints`` to new tool responses so that Claude Code can propose follow-up actions without the user having to discover them. """ from...
385
11,994
code-review-graph
code_review_graph/constants.py
.py
"""Shared constants for code-review-graph.""" from __future__ import annotations import math import os from pathlib import Path def _bounded_float_env( name: str, default: float, *, lower: float, upper: float, ) -> float: """Read a finite float strictly inside ``(lower, upper)``. Invali...
125
4,643
code-review-graph
code_review_graph/registry.py
.py
"""Multi-repo registry and connection pool. Manages a registry of multiple repositories at ``~/.code-review-graph/registry.json`` and provides a connection pool for concurrent access to multiple graph databases. """ from __future__ import annotations import json import logging import sqlite3 import threading from co...
327
10,404
code-review-graph
code_review_graph/scoped_resolver.py
.py
"""Post-build resolver for PHP/Rust/C# scoped calls and receiver-typed calls. Tree-sitter extraction records a scoped/static call such as ``Mailer::send($x)`` (PHP) or ``Mailer::send(x)`` / ``Self::new()`` (Rust) as a ``CALLS`` edge whose target is the intermediate ``Class::method`` string. That string matches neithe...
515
20,989
code-review-graph
code_review_graph/skills.py
.py
"""Claude Code skills and hooks auto-install. Generates Claude Code agent skill files, hooks configuration, and CLAUDE.md integration for seamless code-review-graph usage. Also supports multi-platform MCP server installation and Cursor hooks / OpenCode plugin generation. """ from __future__ import annotations import...
1,862
71,358
code-review-graph
code_review_graph/search.py
.py
"""Hybrid search engine combining FTS5 (BM25) and vector embeddings. Uses Reciprocal Rank Fusion (RRF) to merge results from full-text search and semantic similarity, with query-aware kind boosting and context-file boosting for relevance tuning. """ from __future__ import annotations import logging import re import ...
471
16,274
code-review-graph
code_review_graph/enrich.py
.py
"""PreToolUse search enrichment for Claude Code hooks. Intercepts Grep/Glob/Bash/Read tool calls and enriches them with structural context from the code knowledge graph: callers, callees, execution flows, community membership, and test coverage. """ from __future__ import annotations import json import logging impor...
307
9,363
code-review-graph
code_review_graph/flows.py
.py
"""Execution flow detection, tracing, and criticality scoring. Detects entry points in the codebase (functions with no incoming CALLS edges, framework-decorated handlers, and conventional name patterns), traces execution paths via forward BFS through CALLS edges, scores each flow for criticality, and persists results ...
719
25,535
code-review-graph
code_review_graph/rescript_resolver.py
.py
"""Post-build pass that resolves ReScript cross-module references. The per-file parser emits CALLS/IMPORTS_FROM edges with bare targets like ``LogicUtils.safeParse`` because the parser only sees one file at a time. This module runs after ``full_build`` / incremental updates and rewrites those targets to canonical qual...
207
7,564
code-review-graph
code_review_graph/hcl_resolver.py
.py
"""Post-build resolution for Terraform module-scoped graph relationships.""" from __future__ import annotations import logging from pathlib import Path from typing import TYPE_CHECKING if TYPE_CHECKING: from .graph import GraphStore logger = logging.getLogger(__name__) def resolve_hcl_module_references(store:...
111
3,927
code-review-graph
code_review_graph/context_savings.py
.py
"""Compact estimated context savings helpers. The project intentionally labels these values as estimates: the helper uses a conservative character-count approximation instead of model-specific tokenizers. """ from __future__ import annotations import json from pathlib import Path from typing import Any, Iterable CH...
318
10,981
code-review-graph
code_review_graph/cli.py
.py
"""CLI entry point for code-review-graph. Usage: code-review-graph install code-review-graph init code-review-graph uninstall [--platform NAME] [--dry-run] [--yes] [--repo PATH] code-review-graph build [--base BASE] code-review-graph update [--base BASE] code-review-graph forget PATH [PATH ...]...
2,029
77,292
code-review-graph
code_review_graph/exports.py
.py
"""Additional export formats: JSON, GraphML, Neo4j Cypher, Obsidian, SVG.""" from __future__ import annotations import html import json import logging import os import re import tempfile from pathlib import Path from .graph import GraphStore, _sanitize_name from .visualization import export_graph_data logger = logg...
448
14,266
code-review-graph
code_review_graph/daemon.py
.py
"""Multi-repo watch daemon for code-review-graph. Reads ``~/.code-review-graph/watch.toml`` to configure which repositories to watch, then spawns one ``code-review-graph watch`` child process per repo. Monitors the config file for live changes (adding/removing repos) and health-checks child processes, restarting any ...
1,127
39,452
code-review-graph
code_review_graph/incremental.py
.py
"""Incremental graph update logic. Detects changed files via git diff, re-parses only changed + impacted files, and updates the graph accordingly. Also supports CLI invocation for hooks. """ from __future__ import annotations import concurrent.futures import fnmatch import hashlib import logging import os import re ...
1,610
61,573
code-review-graph
code_review_graph/prompts.py
.py
"""MCP prompt templates for Code Review Graph. Provides 5 pre-built prompt workflows, all enforcing token-efficient detail_level="minimal" first patterns with get_minimal_context entry point. 1. review_changes - pre-commit review using detect_changes + affected_flows 2. architecture_map - architecture docs using co...
160
6,491
code-review-graph
code_review_graph/python_resolver.py
.py
"""Post-build resolution for repository-local Python imports.""" from __future__ import annotations import json import logging from typing import TYPE_CHECKING if TYPE_CHECKING: from .graph import GraphStore logger = logging.getLogger(__name__) def resolve_python_imports(store: GraphStore) -> dict[str, int]: ...
124
4,090
code-review-graph
code_review_graph/custom_languages.py
.py
"""Config-driven custom language support ("bring your own language"). Repos can teach the parser new tree-sitter languages without forking by dropping a ``languages.toml`` file into ``.code-review-graph/``:: [languages.erlang] extensions = [".erl", ".hrl"] grammar = "erlang" # tree_...
354
12,686
code-review-graph
code_review_graph/communities.py
.py
"""Community/cluster detection for the code knowledge graph. Detects communities of related code nodes using the Leiden algorithm (via igraph, optional) with a file-based grouping fallback when igraph is not installed. """ from __future__ import annotations import logging import random import re from collections imp...
1,089
37,712
code-review-graph
code_review_graph/spring_resolver.py
.py
"""Post-build Spring DI call resolver. After tree-sitter parsing, Java CALLS edges whose target is a bare method name (e.g. ``calculate``) carry ``extra.receiver`` naming the local variable that was called on (e.g. ``invoiceCalculationService``). This module resolves those receivers through the INJECTS map to their d...
201
8,065
code-review-graph
code_review_graph/daemon_cli.py
.py
"""CLI entry point for the crg-daemon multi-repo watcher. Usage: crg-daemon start [--foreground] crg-daemon stop crg-daemon restart [--foreground] crg-daemon status crg-daemon logs [--repo ALIAS] [--follow] [--lines N] crg-daemon add <path> [--alias ALIAS] crg-daemon remove <path_or_alias> ...
330
9,444
code-review-graph
code_review_graph/memory.py
.py
"""Memory/feedback loop -- persist Q&A results for graph enrichment.""" from __future__ import annotations import logging import re import time from pathlib import Path from typing import Any logger = logging.getLogger(__name__) def save_result( question: str, answer: str, nodes: list[str] | None = Non...
143
3,848
code-review-graph
code_review_graph/graph.py
.py
"""SQLite-backed knowledge graph storage and query engine. Stores code structure as nodes (File, Class, Function, Type, Test) and edges (CALLS, IMPORTS_FROM, INHERITS, IMPLEMENTS, CONTAINS, TESTED_BY, DEPENDS_ON, REFERENCES). Supports impact-radius queries and subgraph extraction. """ from __future__ import annotatio...
2,256
90,608
code-review-graph
code_review_graph/eval/scorer.py
.py
"""Scoring metrics for evaluating graph-based code review quality. Provides: - Token efficiency: measures how many tokens the graph saves vs raw context. - Mean Reciprocal Rank (MRR): evaluates ranking quality for search results. - Precision / Recall / F1: evaluates set-based retrieval accuracy. """ from __future__ i...
86
2,574
code-review-graph
code_review_graph/eval/reporter.py
.py
"""Markdown report generator for evaluation benchmark results. Takes a list of benchmark result dicts and produces a formatted markdown table suitable for inclusion in documentation or CI output. """ from __future__ import annotations import csv from pathlib import Path from typing import Any def generate_markdown...
302
9,942
code-review-graph
code_review_graph/eval/runner.py
.py
"""Evaluation runner: orchestrates benchmark execution across repositories.""" from __future__ import annotations import csv import logging import sqlite3 import subprocess from datetime import date from pathlib import Path try: import yaml # type: ignore[import-untyped] except ImportError: yaml = None # t...
381
14,597
code-review-graph
code_review_graph/eval/__init__.py
.py
"""Evaluation framework for code-review-graph. Provides scoring metrics (token efficiency, MRR, precision/recall), benchmark runners, and report generators for benchmarking graph-based code reviews. """ from __future__ import annotations from .reporter import generate_full_report, generate_markdown_report, generate_...
34
1,022
code-review-graph
code_review_graph/eval/token_benchmark.py
.py
"""Measures total tokens consumed by agent workflows against benchmark repos.""" from __future__ import annotations import json import logging from typing import Any, Callable logger = logging.getLogger(__name__) def estimate_tokens(obj: Any) -> int: """Estimate token count from JSON-serializable object. ...
183
5,860
code-review-graph
code_review_graph/eval/benchmarks/token_efficiency.py
.py
"""Token efficiency benchmark: compares naive, standard, and graph-based token counts. Failure semantics: if ``get_review_context`` throws, the row is recorded with ``status="error"`` and empty metric fields. It stays in the CSV for forensics but is excluded from every aggregate — a failed tool call is not a measureme...
144
4,908
code-review-graph
code_review_graph/eval/benchmarks/search_quality.py
.py
"""Search quality benchmark: measures search result ranking via MRR.""" from __future__ import annotations import logging import sqlite3 from pathlib import Path logger = logging.getLogger(__name__) def run(repo_path: Path, store, config: dict) -> list[dict]: """Run search quality benchmark.""" results = [...
66
2,198
code-review-graph
code_review_graph/eval/benchmarks/agent_baseline.py
.py
"""Agent baseline benchmark: grep-and-read-top-k versus a graph query. The whole-corpus baseline in the standalone token benchmark is an upper bound no real agent pays: a competent agent greps for identifiers from the question and reads only the best-matching files. This benchmark measures that realistic baseline: 1....
210
7,924
code-review-graph
code_review_graph/eval/benchmarks/multi_hop_retrieval.py
.py
"""Multi-hop retrieval benchmark. Tests a two-step tool chain that mimics how an LLM agent actually uses the graph for complex tasks: 1. ``hybrid_search(nl_query)`` to find a starting anchor from a natural- language question. 2. ``query_graph(pattern, target=anchor)`` to traverse one hop along the reque...
132
4,500
code-review-graph
code_review_graph/eval/benchmarks/build_performance.py
.py
"""Build performance benchmark: measures timing of graph operations.""" from __future__ import annotations import logging import time from pathlib import Path logger = logging.getLogger(__name__) def run(repo_path: Path, store, config: dict) -> list[dict]: """Run build performance benchmark.""" stats = sto...
61
1,911
code-review-graph
code_review_graph/eval/benchmarks/flow_completeness.py
.py
"""Flow completeness benchmark: evaluates entry point detection and flow tracing.""" from __future__ import annotations import logging from pathlib import Path logger = logging.getLogger(__name__) def run(repo_path: Path, store, config: dict) -> list[dict]: """Run flow completeness benchmark.""" from code_...
37
1,130
code-review-graph
code_review_graph/eval/benchmarks/impact_accuracy.py
.py
"""Impact accuracy benchmark: measures precision/recall of change impact analysis. Two ground-truth modes are emitted side by side (``ground_truth_mode`` column): - **graph-derived (circular — upper bound)** — the historical mode. Ground truth is the changed files plus files with CALLS/IMPORTS_FROM edges into the...
221
8,080
code-review-graph
code_review_graph/tools/flows_tools.py
.py
"""Tools 10, 11: list_flows, get_flow.""" from __future__ import annotations from pathlib import Path from typing import Any from ..flows import get_flow_by_id, get_flows from ..hints import generate_hints, get_session from ._common import _get_store # ---------------------------------------------------------------...
177
6,096
code-review-graph
code_review_graph/tools/review.py
.py
"""Tools 4, 12, 16: review context, affected flows, detect changes.""" from __future__ import annotations import logging from pathlib import Path from typing import Any from ..changes import analyze_changes, parse_diff_ranges, parse_git_diff_ranges # noqa: F401 from ..context_savings import attach_context_savings, ...
481
17,694
code-review-graph
code_review_graph/tools/community_tools.py
.py
"""Tools 13, 14, 15: community listing, detail, architecture overview.""" from __future__ import annotations from collections import Counter from typing import Any from ..communities import get_architecture_overview, get_communities from ..context_savings import attach_context_savings from ..graph import node_to_dic...
247
8,866
code-review-graph
code_review_graph/tools/analysis_tools.py
.py
"""MCP tool wrappers for graph analysis features.""" from __future__ import annotations from typing import Any from ..analysis import ( find_bridge_nodes, find_hub_nodes, find_knowledge_gaps, find_surprising_connections, generate_suggested_questions, ) from ._common import _get_store def get_hu...
185
5,713
code-review-graph
code_review_graph/tools/registry_tools.py
.py
"""Tools 21, 22: list_repos_func, cross_repo_search_func.""" from __future__ import annotations import logging from pathlib import Path from typing import Any from ..graph import GraphStore from ..incremental import get_db_path from ..search import hybrid_search logger = logging.getLogger(__name__) # ------------...
126
4,034
code-review-graph
code_review_graph/tools/__init__.py
.py
"""MCP tool definitions for the Code Review Graph server. Exposes 27 tools: 1. build_or_update_graph - full or incremental build 2. get_impact_radius - blast radius from changed files 3. query_graph - predefined graph queries 4. get_review_context - focused subgraph + review prompt 5. semantic_sea...
159
5,663
code-review-graph
code_review_graph/tools/refactor_tools.py
.py
"""Tools 17, 18: refactor_func, apply_refactor_func.""" from __future__ import annotations from pathlib import Path from typing import Any from ..hints import generate_hints, get_session from ..incremental import find_project_root from ..refactor import ( apply_refactor, find_dead_code, rename_preview, ...
169
5,689
code-review-graph
code_review_graph/tools/_common.py
.py
"""Shared utilities for tool sub-modules.""" from __future__ import annotations import logging import sqlite3 import subprocess from datetime import datetime from pathlib import Path from typing import Any from ..graph import GraphStore from ..incremental import find_project_root, get_db_path from ..parser import no...
293
11,176
code-review-graph
code_review_graph/tools/docs.py
.py
"""Tools 7, 8, 19, 20: embed_graph, get_docs_section, wiki tools.""" from __future__ import annotations import logging from pathlib import Path from typing import Any from ..embeddings import EmbeddingStore, embed_all_nodes from ..incremental import find_project_root, get_db_path from ._common import _get_store, _re...
283
10,163
code-review-graph
code_review_graph/tools/context.py
.py
"""Tool: get_minimal_context — ultra-compact context for token-efficient workflows.""" from __future__ import annotations import logging import sqlite3 import subprocess from pathlib import Path from typing import Any from ..incremental import get_db_path from ..parser import normalize_file_path from ._common import...
190
7,234
code-review-graph
code_review_graph/tools/query.py
.py
"""Tools 2, 3, 5, 6, 9: query / search / stats helpers.""" from __future__ import annotations import logging import re from pathlib import Path from typing import Any from ..config_keys import normalize_spring_config_key from ..context_savings import attach_context_savings, estimate_file_tokens from ..embeddings imp...
1,017
40,934
code-review-graph
code_review_graph/tools/build.py
.py
"""Tool 1: build_or_update_graph + run_postprocess.""" from __future__ import annotations import logging import sqlite3 import time from typing import Any from ..incremental import ( full_build, incremental_update, resolve_incremental_base, ) from ._common import _get_store logger = logging.getLogger(__...
703
26,995
claude-code-templates
cli-tool/components/settings/statusline/deadline-countdown.py
.py
#!/usr/bin/env python3 """ Deadline Countdown Statusline Shows git branch, changed files count, and countdown to deadline. Color-coded urgency: green >2h, yellow 1-2h, red <1h, blinking <30min. Configure with DEADLINE_TIME (HH:MM, default 15:30) env var. """ import json import os import subprocess import sys from date...
126
3,112
claude-code-templates
cli-tool/components/settings/statusline/context-monitor.py
.py
#!/usr/bin/env python3 """ Claude Code Context Monitor Real-time context usage monitoring with visual indicators and session analytics """ import json import sys import os import re import subprocess def get_git_status(): """Get git branch and change count for statusline.""" try: # Check if inside a ...
300
9,528
claude-code-templates
cli-tool/components/sandbox/e2b/e2b-monitor.py
.py
#!/usr/bin/env python3.11 """ E2B Sandbox Real-time Monitor Provides real-time monitoring and debugging of E2B sandbox operations """ import os import sys import time import json from datetime import datetime def log_with_timestamp(message, level="INFO"): timestamp = datetime.now().strftime("%H:%M:%S") print(...
229
8,714
claude-code-templates
cli-tool/components/sandbox/e2b/e2b-launcher.py
.py
#!/usr/bin/env python3.11 """ E2B Claude Code Sandbox Launcher Executes Claude Code prompts in isolated E2B cloud sandbox """ import os import sys import json import datetime import re import threading import time # Debug: Print Python path information print(f"Python executable: {sys.executable}") print(f"Python vers...
438
18,739
claude-code-templates
cli-tool/components/hooks/security/secret-scanner.py
.py
#!/usr/bin/env python3 """ Secret Scanner Hook Detects hardcoded secrets before git commits """ import json import sys import re import subprocess import os # Secret detection patterns with descriptions SECRET_PATTERNS = [ # AWS Keys (r'AKIA[0-9A-Z]{16}', 'AWS Access Key ID', 'high'), (r'(?i)aws[_\-\s]*se...
368
13,401
claude-code-templates
cli-tool/components/hooks/security/dangerous-command-blocker.py
.py
#!/usr/bin/env python3 """ Dangerous Command Blocker Hook Multi-level security system for blocking dangerous shell commands """ import json import sys import re # Load command from stdin data = json.load(sys.stdin) cmd = data.get('tool_input', {}).get('command', '') # === LEVEL 1: CATASTROPHIC COMMANDS (ALWAYS BLOCK...
99
4,688
claude-code-templates
cli-tool/components/hooks/monitoring/context-timeline.py
.py
#!/usr/bin/env python3 """ context-timeline: Claude Code session visualizer. Modes (called by Claude Code hooks via stdin JSON): --server-start SessionStart hook — launch daemon + open browser --event <NAME> PreToolUse / PostToolUse / Stop hook — notify server --shutdown Kill daemon manu...
1,225
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claude-code-templates
cli-tool/components/hooks/automation/change-logger.py
.py
#!/usr/bin/env python3 """ Change Logger Hook Logs every file mutation (Edit, Write, Bash) to a CSV file for demo prep and session review. Output: .claude/critical_log_changes.csv """ import csv import json import os import sys from datetime import datetime # Read-only commands that should not be logged READONLY_COMM...
86
2,459
claude-code-templates
cli-tool/components/hooks/automation/telegram-pr-webhook.py
.py
#!/usr/bin/env python3 """ Telegram PR Webhook Hook Sends a Telegram notification when a new PR is created via `gh pr create`. Includes the PR URL and the Vercel preview URL. Required environment variables: TELEGRAM_BOT_TOKEN - Bot token from @BotFather TELEGRAM_CHAT_ID - Chat ID for notifications Optional en...
138
3,887
claude-code-templates
cli-tool/components/hooks/git/conventional-commits.py
.py
#!/usr/bin/env python3 import json import sys import re try: input_data = json.load(sys.stdin) except json.JSONDecodeError as e: print(f"Error: Invalid JSON input: {e}", file=sys.stderr) sys.exit(1) tool_name = input_data.get("tool_name", "") tool_input = input_data.get("tool_input", {}) command = tool_in...
85
2,534
claude-code-templates
cli-tool/components/hooks/git/validate-branch-name.py
.py
#!/usr/bin/env python3 import json import sys import re try: input_data = json.load(sys.stdin) except json.JSONDecodeError as e: print(f"Error: Invalid JSON input: {e}", file=sys.stderr) sys.exit(1) tool_name = input_data.get("tool_name", "") tool_input = input_data.get("tool_input", {}) command = tool_in...
97
2,518
claude-code-templates
cli-tool/components/hooks/git/prevent-direct-push.py
.py
#!/usr/bin/env python3 import json import sys import subprocess try: input_data = json.load(sys.stdin) except json.JSONDecodeError as e: print(f"Error: Invalid JSON input: {e}", file=sys.stderr) sys.exit(1) tool_name = input_data.get("tool_name", "") tool_input = input_data.get("tool_input", {}) command =...
87
2,163
claude-code-templates
cli-tool/components/skills/media/screenshot/scripts/take_screenshot.py
.py
#!/usr/bin/env python3 """Cross-platform screenshot helper for Codex skills.""" from __future__ import annotations import argparse import datetime as dt import json import os import platform import shutil import subprocess import tempfile from pathlib import Path SCRIPT_DIR = Path(__file__).resolve().parent MAC_PERM...
586
19,659
claude-code-templates
cli-tool/components/skills/media/transcribe/scripts/transcribe_diarize.py
.py
#!/usr/bin/env python3 """Transcribe audio (optionally with speaker diarization) using OpenAI.""" from __future__ import annotations import argparse import base64 import json import mimetypes import os from pathlib import Path import sys from typing import Any, Dict, List, Optional, Tuple DEFAULT_MODEL = "gpt-4o-min...
277
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claude-code-templates
cli-tool/components/skills/media/speech/scripts/text_to_speech.py
.py
#!/usr/bin/env python3 """Generate speech audio with the OpenAI Audio API (TTS). Defaults to gpt-4o-mini-tts-2025-12-15 and a built-in voice (cedar). """ from __future__ import annotations import argparse import json import os from pathlib import Path import re import sys import time from typing import Any, Dict, Li...
529
15,592
claude-code-templates
cli-tool/components/skills/security/security-ownership-map/scripts/community_maintainers.py
.py
#!/usr/bin/env python3 """Report monthly maintainers for a file's community.""" from __future__ import annotations import argparse import csv import datetime as dt import json import math import re import subprocess import sys from collections import Counter, defaultdict from pathlib import Path from typing import It...
545
18,122
claude-code-templates
cli-tool/components/skills/security/security-ownership-map/scripts/query_ownership.py
.py
#!/usr/bin/env python3 """Query ownership-map outputs without loading everything into an LLM context.""" from __future__ import annotations import argparse import csv import json import sys from collections import defaultdict from pathlib import Path from typing import Iterable def parse_args() -> argparse.Namespac...
484
17,991
claude-code-templates
cli-tool/components/skills/security/security-ownership-map/scripts/run_ownership_map.py
.py
#!/usr/bin/env python3 """One-shot runner for building the security ownership map.""" from __future__ import annotations import argparse import subprocess import sys from pathlib import Path def parse_args() -> argparse.Namespace: parser = argparse.ArgumentParser( description="Run build_ownership_map.py...
201
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claude-code-templates
cli-tool/components/skills/security/security-ownership-map/scripts/build_ownership_map.py
.py
#!/usr/bin/env python3 """Build a security ownership map from git history.""" from __future__ import annotations import argparse import csv import datetime as dt import fnmatch import json import math import os import re import subprocess import sys from collections import defaultdict from pathlib import Path from ty...
957
34,330
claude-code-templates
cli-tool/components/skills/scientific/torch_geometric/scripts/create_gnn_template.py
.py
#!/usr/bin/env python3 """ Generate boilerplate code for common GNN architectures in PyTorch Geometric. This script creates ready-to-use GNN model templates with training loops, evaluation metrics, and proper data handling. Usage: python create_gnn_template.py --model gcn --task node_classification --output my_mo...
530
15,342
claude-code-templates
cli-tool/components/skills/scientific/torch_geometric/scripts/benchmark_model.py
.py
#!/usr/bin/env python3 """ Benchmark GNN models on standard datasets. This script provides a simple way to benchmark different GNN architectures on common datasets and compare their performance. Usage: python benchmark_model.py --models gcn gat --dataset Cora python benchmark_model.py --models gcn --dataset C...
310
10,028
claude-code-templates
cli-tool/components/skills/scientific/torch_geometric/scripts/visualize_graph.py
.py
#!/usr/bin/env python3 """ Visualize PyTorch Geometric graph structures using networkx and matplotlib. This script provides utilities to visualize Data objects, including: - Graph structure (nodes and edges) - Node features (as colors) - Edge attributes (as edge colors/widths) - Community/cluster assignments Usage: ...
314
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claude-code-templates
cli-tool/components/skills/scientific/pydicom/scripts/extract_metadata.py
.py
#!/usr/bin/env python3 """ Extract and display DICOM metadata in a readable format. Usage: python extract_metadata.py file.dcm python extract_metadata.py file.dcm --output metadata.txt python extract_metadata.py file.dcm --format json --output metadata.json """ import argparse import sys import json from ...
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claude-code-templates
cli-tool/components/skills/scientific/pydicom/scripts/anonymize_dicom.py
.py
#!/usr/bin/env python3 """ Anonymize DICOM files by removing or replacing Protected Health Information (PHI). Usage: python anonymize_dicom.py input.dcm output.dcm python anonymize_dicom.py input.dcm output.dcm --patient-id ANON001 """ import argparse import sys from pathlib import Path try: import pydic...
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claude-code-templates
cli-tool/components/skills/scientific/pydicom/scripts/dicom_to_image.py
.py
#!/usr/bin/env python3 """ Convert DICOM files to common image formats (PNG, JPEG, TIFF). Usage: python dicom_to_image.py input.dcm output.png python dicom_to_image.py input.dcm output.jpg --format JPEG python dicom_to_image.py input.dcm output.tiff --apply-windowing """ import argparse import sys from pa...
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6,101
claude-code-templates
cli-tool/components/skills/scientific/opentrons-integration/scripts/basic_protocol_template.py
.py
#!/usr/bin/env python3 """ Basic Opentrons Protocol Template This template provides a minimal starting point for creating Opentrons protocols. Replace the placeholder values and add your specific protocol logic. """ from opentrons import protocol_api # Metadata metadata = { 'protocolName': 'Basic Protocol Templa...
68
1,537
claude-code-templates
cli-tool/components/skills/scientific/opentrons-integration/scripts/serial_dilution_template.py
.py
#!/usr/bin/env python3 """ Serial Dilution Protocol Template This template demonstrates how to perform a serial dilution across a plate row. Useful for creating concentration gradients for assays. """ from opentrons import protocol_api metadata = { 'protocolName': 'Serial Dilution Template', 'author': 'Opent...
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claude-code-templates
cli-tool/components/skills/scientific/opentrons-integration/scripts/pcr_setup_template.py
.py
#!/usr/bin/env python3 """ PCR Setup Protocol Template This template demonstrates how to set up PCR reactions using the Thermocycler module. Includes master mix distribution, sample addition, and PCR cycling. """ from opentrons import protocol_api metadata = { 'protocolName': 'PCR Setup with Thermocycler', '...
155
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claude-code-templates
cli-tool/components/skills/scientific/stable-baselines3/scripts/train_rl_agent.py
.py
""" Template script for training RL agents with Stable Baselines3. This template demonstrates best practices for: - Setting up training with proper monitoring - Using callbacks for evaluation and checkpointing - Vectorized environments for efficiency - TensorBoard integration - Model saving and loading """ import gym...
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