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singleenc_canvas_meta_sampler05.predict.log

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+Tail audit DF: predicted_count=3, mean_probability=0.009148, max_probability=0.992525
+Tail audit INF: predicted_count=6, mean_probability=0.010999, max_probability=0.842095
+Saved predictions: /marimo/single_encoder_split_submissions/singleenc_canvas_meta_sampler05.csv

singleenc_canvas_meta_sampler05/confusion_analysis.json

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singleenc_canvas_meta_sampler05/confusion_matrix.csv

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singleenc_canvas_meta_sampler05/confusion_matrix_raw.csv

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singleenc_canvas_meta_sampler05/data_summary.json

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singleenc_canvas_meta_sampler05/metrics.json

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singleenc_canvas_meta_sampler05/per_class_metrics.csv

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singleenc_canvas_meta_sampler05/per_class_metrics_raw.csv

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singleenc_canvas_meta_sampler05/prediction_summary.json

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+}

singleenc_canvas_meta_sampler05/run_config.json

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+    "executable": "/tmp/uv-venv/bin/python",
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+      "cuda_available": true,
+      "cuda_device_count": 1,
+      "cuda_device_name": "NVIDIA RTX PRO 6000 Blackwell Server Edition"
+    },
+    "git": {
+      "available": false
+    }
+  },
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+    "BEN_OTH",
+    "BKL",
+    "DF",
+    "INF",
+    "MAL_OTH",
+    "MEL",
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+    "SCCKA",
+    "VASC"
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+  "label_to_idx": {
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+      "unknown"
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+      "genital",
+      "hand",
+      "head_neck_face",
+      "lower_extremity",
+      "trunk",
+      "unknown",
+      "upper_extremity"
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+    "monet_columns": [
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+      "MONET_gel_water_drop_fluid_dermoscopy_liquid",
+      "MONET_hair",
+      "MONET_pigmented",
+      "MONET_skin_markings_pen_ink_purple_pen",
+      "MONET_ulceration_crust",
+      "MONET_vasculature_vessels"
+    ]
+  },
+  "model_type": "DualEffB2MetadataClassifier",
+  "train_size": 4192,
+  "val_size": 1048,
+  "fold": null,
+  "metadata_fusion": "concat",
+  "image_fusion": "single_encoder_canvas",
+  "clinical_backbone": "timm efficientnet_b2",
+  "dermoscopic_backbone": "timm efficientnet_b2",
+  "paths": {
+    "output_dir": "/marimo/single_encoder_split_runs/singleenc_canvas_meta_sampler05",
+    "data_dir": "/marimo/milk10k",
+    "dermoscopic_mask_dir": "None",
+    "clinical_checkpoint": "None",
+    "dermoscopic_checkpoint": "None",
+    "resume_checkpoint": "None",
+    "augmented_data_dir": "None"
+  }
+}

singleenc_canvas_meta_sampler05/run_diagnostics.json

@@ -0,0 +1,925 @@
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+        }
+      ],
+      "SCCKA": [
+        {
+          "predicted": "SCCKA",
+          "true": "BCC",
+          "count": 43,
+          "rate_of_predicted": 0.30935251798561153
+        },
+        {
+          "predicted": "SCCKA",
+          "true": "AKIEC",
+          "count": 17,
+          "rate_of_predicted": 0.1223021582733813
+        },
+        {
+          "predicted": "SCCKA",
+          "true": "BKL",
+          "count": 11,
+          "rate_of_predicted": 0.07913669064748201
+        },
+        {
+          "predicted": "SCCKA",
+          "true": "MEL",
+          "count": 2,
+          "rate_of_predicted": 0.014388489208633094
+        },
+        {
+          "predicted": "SCCKA",
+          "true": "NV",
+          "count": 1,
+          "rate_of_predicted": 0.007194244604316547
+        }
+      ],
+      "VASC": [
+        {
+          "predicted": "VASC",
+          "true": "BCC",
+          "count": 1,
+          "rate_of_predicted": 0.1111111111111111
+        },
+        {
+          "predicted": "VASC",
+          "true": "MEL",
+          "count": 1,
+          "rate_of_predicted": 0.1111111111111111
+        }
+      ]
+    },
+    "top_confusion_pairs": [
+      {
+        "true": "BCC",
+        "predicted": "SCCKA",
+        "count": 43,
+        "rate_of_true": 0.08531746031746032
+      },
+      {
+        "true": "BKL",
+        "predicted": "BCC",
+        "count": 36,
+        "rate_of_true": 0.3302752293577982
+      },
+      {
+        "true": "MEL",
+        "predicted": "NV",
+        "count": 25,
+        "rate_of_true": 0.2777777777777778
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 20,
+        "rate_of_true": 0.03968253968253968
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "BCC",
+        "count": 20,
+        "rate_of_true": 0.21052631578947367
+      },
+      {
+        "true": "NV",
+        "predicted": "MEL",
+        "count": 19,
+        "rate_of_true": 0.12751677852348994
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "SCCKA",
+        "count": 17,
+        "rate_of_true": 0.2786885245901639
+      },
+      {
+        "true": "NV",
+        "predicted": "BKL",
+        "count": 13,
+        "rate_of_true": 0.087248322147651
+      },
+      {
+        "true": "BCC",
+        "predicted": "BKL",
+        "count": 12,
+        "rate_of_true": 0.023809523809523808
+      },
+      {
+        "true": "BKL",
+        "predicted": "SCCKA",
+        "count": 11,
+        "rate_of_true": 0.10091743119266056
+      },
+      {
+        "true": "BKL",
+        "predicted": "AKIEC",
+        "count": 10,
+        "rate_of_true": 0.09174311926605505
+      },
+      {
+        "true": "MEL",
+        "predicted": "BCC",
+        "count": 10,
+        "rate_of_true": 0.1111111111111111
+      },
+      {
+        "true": "MEL",
+        "predicted": "BKL",
+        "count": 10,
+        "rate_of_true": 0.1111111111111111
+      },
+      {
+        "true": "BKL",
+        "predicted": "MEL",
+        "count": 9,
+        "rate_of_true": 0.08256880733944955
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "BCC",
+        "count": 7,
+        "rate_of_true": 0.11475409836065574
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "BKL",
+        "count": 6,
+        "rate_of_true": 0.09836065573770492
+      },
+      {
+        "true": "BKL",
+        "predicted": "NV",
+        "count": 6,
+        "rate_of_true": 0.05504587155963303
+      },
+      {
+        "true": "BCC",
+        "predicted": "MEL",
+        "count": 5,
+        "rate_of_true": 0.00992063492063492
+      },
+      {
+        "true": "NV",
+        "predicted": "BCC",
+        "count": 5,
+        "rate_of_true": 0.03355704697986577
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "AKIEC",
+        "count": 5,
+        "rate_of_true": 0.05263157894736842
+      }
+    ],
+    "watched_confusion_patterns": [
+      {
+        "true": "BCC",
+        "predicted": "SCCKA",
+        "count": 43,
+        "rate_of_true": 0.08531746031746032
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 20,
+        "rate_of_true": 0.03968253968253968
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "SCCKA",
+        "count": 17,
+        "rate_of_true": 0.2786885245901639
+      },
+      {
+        "true": "BCC",
+        "predicted": "BKL",
+        "count": 12,
+        "rate_of_true": 0.023809523809523808
+      },
+      {
+        "true": "BKL",
+        "predicted": "SCCKA",
+        "count": 11,
+        "rate_of_true": 0.10091743119266056
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "AKIEC",
+        "count": 5,
+        "rate_of_true": 0.05263157894736842
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "BKL",
+        "count": 5,
+        "rate_of_true": 0.05263157894736842
+      },
+      {
+        "true": "INF",
+        "predicted": "BCC",
+        "count": 4,
+        "rate_of_true": 0.4
+      },
+      {
+        "true": "INF",
+        "predicted": "NV",
+        "count": 3,
+        "rate_of_true": 0.3
+      },
+      {
+        "true": "INF",
+        "predicted": "BEN_OTH",
+        "count": 1,
+        "rate_of_true": 0.1
+      }
+    ]
+  }
+}

singleenc_canvas_meta_sampler05/run_report.md

@@ -0,0 +1,162 @@
+# MILK10k Run Report
+
+## Config Summary
+
+- fold: None
+- output_dir: /marimo/single_encoder_split_runs/singleenc_canvas_meta_sampler05
+- backbone: efficientnet_b2
+- metadata_fusion: concat
+- image_fusion: single_encoder_canvas
+- loss: ce
+- class_weight: False
+- weighted_sampler: True
+- balance_mode: none
+- balance_head_ratio: 2.0
+- balance_tail_floor: 100
+- balance_min_source_count: 20
+- augmented_data_dir: None
+- dermoscopic_mask_dir: None
+- min_dermoscopic_mask_ratio: 0.01
+- augmented_classes: []
+- augmented_max_per_class: 0
+- freeze_metadata_head: False
+- zero_augmented_metadata: False
+
+## Final Metrics
+
+- accuracy: 0.6774809160305344
+- balanced_accuracy: 0.4665233342016087
+- dice_macro: 0.47014667387149883
+- f1_macro: 0.47014667387149883
+- roc_auc_macro_ovr: 0.9046510879118158
+- top2_accuracy: 0.8645038167938931
+- top3_accuracy: 0.9312977099236641
+
+## Data Distribution
+
+### Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+### Validation
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+## Per-Class Metrics
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| AKIEC | 61 | 0.439394 | 0.47541 | 0.962513 | 0.456693 | 0.899131 | 0.719639 |
+| BCC | 504 | 0.824701 | 0.821429 | 0.838235 | 0.823062 | 0.916017 | 0.846007 |
+| BEN_OTH | 9 | 0.444444 | 0.444444 | 0.995188 | 0.444444 | 0.917977 | 0.56121 |
+| BKL | 109 | 0.428571 | 0.330275 | 0.948882 | 0.373057 | 0.82945 | 0.750065 |
+| DF | 10 | 0.5 | 0.3 | 0.99711 | 0.375 | 0.963198 | 0.899172 |
+| INF | 10 | 0.2 | 0.1 | 0.996146 | 0.133333 | 0.934971 | 0.950753 |
+| MAL_OTH | 2 | 0 | 0 | 0.999044 | 0 | 0.716539 |  |
+| MEL | 90 | 0.552632 | 0.466667 | 0.964509 | 0.506024 | 0.907782 | 0.7485 |
+| NV | 149 | 0.721854 | 0.731544 | 0.953281 | 0.726667 | 0.952699 | 0.893575 |
+| SCCKA | 95 | 0.467626 | 0.684211 | 0.92235 | 0.555556 | 0.929652 | 0.85163 |
+| VASC | 9 | 0.777778 | 0.777778 | 0.998075 | 0.777778 | 0.983745 | 0.778921 |
+
+## Weak Classes
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| MAL_OTH | 2 | 0 | 0 | 0.999044 | 0 | 0.716539 |  |
+| INF | 10 | 0.2 | 0.1 | 0.996146 | 0.133333 | 0.934971 | 0.950753 |
+| BKL | 109 | 0.428571 | 0.330275 | 0.948882 | 0.373057 | 0.82945 | 0.750065 |
+| DF | 10 | 0.5 | 0.3 | 0.99711 | 0.375 | 0.963198 | 0.899172 |
+| BEN_OTH | 9 | 0.444444 | 0.444444 | 0.995188 | 0.444444 | 0.917977 | 0.56121 |
+
+## Prediction Distribution
+
+| class | pred_count | mean_prob |
+|---|---:|---:|
+| AKIEC | 66 | 0.0770 |
+| BCC | 502 | 0.4313 |
+| BEN_OTH | 9 | 0.0100 |
+| BKL | 84 | 0.1108 |
+| DF | 6 | 0.0065 |
+| INF | 5 | 0.0056 |
+| MAL_OTH | 1 | 0.0018 |
+| MEL | 76 | 0.0714 |
+| NV | 151 | 0.1461 |
+| SCCKA | 139 | 0.1299 |
+| VASC | 9 | 0.0097 |
+
+- mean_confidence: 0.7871461510658264
+- median_confidence: 0.8483368158340454
+- mean_top1_top2_gap: 0.6446683406829834
+- mean_entropy: 0.5853668451309204
+- low_confidence_rows: 111
+
+## Top Confusion Pairs
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BCC | SCCKA | 43 | 0.085 |
+| BKL | BCC | 36 | 0.330 |
+| MEL | NV | 25 | 0.278 |
+| BCC | AKIEC | 20 | 0.040 |
+| SCCKA | BCC | 20 | 0.211 |
+| NV | MEL | 19 | 0.128 |
+| AKIEC | SCCKA | 17 | 0.279 |
+| NV | BKL | 13 | 0.087 |
+| BCC | BKL | 12 | 0.024 |
+| BKL | SCCKA | 11 | 0.101 |
+| BKL | AKIEC | 10 | 0.092 |
+| MEL | BCC | 10 | 0.111 |
+
+## Watched Confusion Patterns
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BCC | SCCKA | 43 | 0.085 |
+| BCC | AKIEC | 20 | 0.040 |
+| AKIEC | SCCKA | 17 | 0.279 |
+| BCC | BKL | 12 | 0.024 |
+| BKL | SCCKA | 11 | 0.101 |
+| SCCKA | AKIEC | 5 | 0.053 |
+| SCCKA | BKL | 5 | 0.053 |
+| INF | BCC | 4 | 0.400 |
+| INF | NV | 3 | 0.300 |
+| INF | BEN_OTH | 1 | 0.100 |
+
+## Warnings
+
+- [high] bcc_boundary_drift: BCC -> AKIEC/BKL/SCCKA count is 75.
+- [medium] tiny_validation_support: MAL_OTH validation support is only 2.

singleenc_canvas_meta_sampler05/split_summary.md

@@ -0,0 +1,66 @@
+# Split Summary
+
+## Full
+
+- rows: 5240
+- real_rows: 5240
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 303 | 0 |
+| BCC | 2522 | 0 |
+| BEN_OTH | 44 | 0 |
+| BKL | 544 | 0 |
+| DF | 52 | 0 |
+| INF | 50 | 0 |
+| MAL_OTH | 9 | 0 |
+| MEL | 450 | 0 |
+| NV | 746 | 0 |
+| SCCKA | 473 | 0 |
+| VASC | 47 | 0 |
+
+## Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+## Val
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+- synthetic_train_only: False

singleenc_pool_meta_sampler05.predict.log

@@ -0,0 +1,4 @@
+
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+Tail audit DF: predicted_count=3, mean_probability=0.007723, max_probability=0.522860
+Tail audit INF: predicted_count=5, mean_probability=0.014818, max_probability=0.611522
+Saved predictions: /marimo/single_encoder_split_submissions/singleenc_pool_meta_sampler05.csv

singleenc_pool_meta_sampler05/confusion_matrix.csv

@@ -0,0 +1,12 @@
+,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
+AKIEC,16,23,0,9,0,0,0,0,0,13,0
+BCC,4,410,2,21,2,5,0,4,3,52,1
+BEN_OTH,1,3,1,0,0,0,0,2,2,0,0
+BKL,4,40,0,42,0,1,0,6,4,11,1
+DF,0,0,1,1,4,0,0,1,3,0,0
+INF,1,4,1,0,0,3,0,0,0,1,0
+MAL_OTH,0,1,1,0,0,0,0,0,0,0,0
+MEL,1,11,0,11,1,0,0,35,29,1,1
+NV,0,5,1,7,0,0,0,16,118,1,1
+SCCKA,3,21,0,9,0,1,0,0,0,61,0
+VASC,0,2,0,0,0,0,0,0,1,0,6

singleenc_pool_meta_sampler05/confusion_matrix_raw.csv

@@ -0,0 +1,12 @@
+,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
+AKIEC,16,23,0,9,0,0,0,0,0,13,0
+BCC,4,410,2,21,2,5,0,4,3,52,1
+BEN_OTH,1,3,1,0,0,0,0,2,2,0,0
+BKL,4,40,0,42,0,1,0,6,4,11,1
+DF,0,0,1,1,4,0,0,1,3,0,0
+INF,1,4,1,0,0,3,0,0,0,1,0
+MAL_OTH,0,1,1,0,0,0,0,0,0,0,0
+MEL,1,11,0,11,1,0,0,35,29,1,1
+NV,0,5,1,7,0,0,0,16,118,1,1
+SCCKA,3,21,0,9,0,1,0,0,0,61,0
+VASC,0,2,0,0,0,0,0,0,1,0,6

singleenc_pool_meta_sampler05/data_summary.json

@@ -0,0 +1,102 @@
+{
+  "full": {
+    "rows": 5240,
+    "class_counts": {
+      "AKIEC": 303,
+      "BCC": 2522,
+      "BEN_OTH": 44,
+      "BKL": 544,
+      "DF": 52,
+      "INF": 50,
+      "MAL_OTH": 9,
+      "MEL": 450,
+      "NV": 746,
+      "SCCKA": 473,
+      "VASC": 47
+    },
+    "real_rows": 5240,
+    "synthetic_rows": 0,
+    "synthetic_class_counts": {
+      "AKIEC": 0,
+      "BCC": 0,
+      "BEN_OTH": 0,
+      "BKL": 0,
+      "DF": 0,
+      "INF": 0,
+      "MAL_OTH": 0,
+      "MEL": 0,
+      "NV": 0,
+      "SCCKA": 0,
+      "VASC": 0
+    },
+    "ignore_metadata_rows": 0,
+    "dermoscopic_mask_status_counts": {}
+  },
+  "train": {
+    "rows": 4192,
+    "class_counts": {
+      "AKIEC": 242,
+      "BCC": 2018,
+      "BEN_OTH": 35,
+      "BKL": 435,
+      "DF": 42,
+      "INF": 40,
+      "MAL_OTH": 7,
+      "MEL": 360,
+      "NV": 597,
+      "SCCKA": 378,
+      "VASC": 38
+    },
+    "real_rows": 4192,
+    "synthetic_rows": 0,
+    "synthetic_class_counts": {
+      "AKIEC": 0,
+      "BCC": 0,
+      "BEN_OTH": 0,
+      "BKL": 0,
+      "DF": 0,
+      "INF": 0,
+      "MAL_OTH": 0,
+      "MEL": 0,
+      "NV": 0,
+      "SCCKA": 0,
+      "VASC": 0
+    },
+    "ignore_metadata_rows": 0,
+    "dermoscopic_mask_status_counts": {}
+  },
+  "val": {
+    "rows": 1048,
+    "class_counts": {
+      "AKIEC": 61,
+      "BCC": 504,
+      "BEN_OTH": 9,
+      "BKL": 109,
+      "DF": 10,
+      "INF": 10,
+      "MAL_OTH": 2,
+      "MEL": 90,
+      "NV": 149,
+      "SCCKA": 95,
+      "VASC": 9
+    },
+    "real_rows": 1048,
+    "synthetic_rows": 0,
+    "synthetic_class_counts": {
+      "AKIEC": 0,
+      "BCC": 0,
+      "BEN_OTH": 0,
+      "BKL": 0,
+      "DF": 0,
+      "INF": 0,
+      "MAL_OTH": 0,
+      "MEL": 0,
+      "NV": 0,
+      "SCCKA": 0,
+      "VASC": 0
+    },
+    "ignore_metadata_rows": 0,
+    "dermoscopic_mask_status_counts": {}
+  },
+  "synthetic_train_only": false
+}

singleenc_pool_meta_sampler05/metrics.json

@@ -0,0 +1,719 @@
+{
+  "best_selection_metric": 0.4380871905392807,
+  "selection_metric_name": "f1_macro",
+  "best_val_f1_macro": 0.4380871905392807,
+  "checkpoint_variant": "raw",
+  "temperature": 1.0,
+  "variants": {
+    "raw": {
+      "checkpoint": "/marimo/single_encoder_split_runs/singleenc_pool_meta_sampler05/best_raw.pt",
+      "temperature": 1.0,
+      "uncalibrated_metrics": {
+        "accuracy": 0.6641221374045801,
+        "nll": 1.0448931668506847,
+        "ece": 0.09157640922787222,
+        "mean_confidence": 0.7500953861370351,
+        "mean_correct_confidence": 0.7963743637893079,
+        "balanced_accuracy": 0.4328933168114638,
+        "top2_accuracy": 0.8530534351145038,
+        "top3_accuracy": 0.9188931297709924,
+        "precision_macro": 0.46146998834498837,
+        "recall_macro": 0.4328933168114638,
+        "f1_macro": 0.4380871905392807,
+        "precision_weighted": 0.6599208548290131,
+        "recall_weighted": 0.6641221374045801,
+        "f1_weighted": 0.6559118295477747,
+        "dice_macro": 0.4380871905392807,
+        "roc_auc_macro_ovr": 0.8857308386990298,
+        "roc_auc_weighted_ovr": 0.8895036986102581,
+        "roc_auc_micro_ovr": 0.9496201416001397,
+        "specificity_macro": 0.9584270217679499,
+        "per_class": [
+          {
+            "class": "AKIEC",
+            "support": 61,
+            "precision": 0.5333333333333333,
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+      "f1-score": 0.45454545454545453,
+      "support": 90.0
+    },
+    "NV": {
+      "precision": 0.7375,
+      "recall": 0.7919463087248322,
+      "f1-score": 0.7637540453074434,
+      "support": 149.0
+    },
+    "SCCKA": {
+      "precision": 0.4357142857142857,
+      "recall": 0.6421052631578947,
+      "f1-score": 0.5191489361702127,
+      "support": 95.0
+    },
+    "VASC": {
+      "precision": 0.6,
+      "recall": 0.6666666666666666,
+      "f1-score": 0.631578947368421,
+      "support": 9.0
+    },
+    "accuracy": 0.6641221374045801,
+    "macro avg": {
+      "precision": 0.46146998834498837,
+      "recall": 0.4328933168114638,
+      "f1-score": 0.4380871905392807,
+      "support": 1048.0
+    },
+    "weighted avg": {
+      "precision": 0.6599208548290131,
+      "recall": 0.6641221374045801,
+      "f1-score": 0.6559118295477747,
+      "support": 1048.0
+    }
+  },
+  "class_names": [
+    "AKIEC",
+    "BCC",
+    "BEN_OTH",
+    "BKL",
+    "DF",
+    "INF",
+    "MAL_OTH",
+    "MEL",
+    "NV",
+    "SCCKA",
+    "VASC"
+  ],
+  "head_class_names": [
+    "AKIEC",
+    "BCC",
+    "BKL",
+    "MEL",
+    "NV",
+    "SCCKA"
+  ],
+  "mean_correct_confidence_head": 0.7984899878501892
+}

singleenc_pool_meta_sampler05/per_class_metrics.csv

@@ -0,0 +1,12 @@
+class,support,precision,recall_sensitivity,specificity,f1,auc_ovr,mean_correct_confidence
+AKIEC,61,0.5333333333333333,0.26229508196721313,0.9858156028368794,0.3516483516483517,0.8898799142956799,0.6617746124931628
+BCC,504,0.7884615384615384,0.8134920634920635,0.7977941176470589,0.80078125,0.8928425536881419,0.8012670447719678
+BEN_OTH,9,0.14285714285714285,0.1111111111111111,0.9942252165543792,0.125,0.886963961073682,0.6123372942059995
+BKL,109,0.42,0.3853211009174312,0.9382321618743344,0.4019138755980861,0.7597971685669901,0.6955728497795155
+DF,10,0.5714285714285714,0.4,0.9971098265895953,0.47058823529411764,0.9729287090558767,0.660877049942581
+INF,10,0.3,0.3,0.9932562620423893,0.3,0.916281310211946,0.5683079984552132
+MAL_OTH,2,0.0,0.0,1.0,0.0,0.7036328871892926,
+MEL,90,0.546875,0.3888888888888889,0.9697286012526096,0.45454545454545453,0.8844815588030619,0.7617536458392234
+NV,149,0.7375,0.7919463087248322,0.9532814238042269,0.7637540453074434,0.9608289598435248,0.8438518682537945
+SCCKA,95,0.4357142857142857,0.6421052631578947,0.9171038824763903,0.5191489361702127,0.8974319324018336,0.8198739529874945
+VASC,9,0.6,0.6666666666666666,0.9961501443695862,0.631578947368421,0.9779702705592985,0.7909394450536013

singleenc_pool_meta_sampler05/per_class_metrics_raw.csv

@@ -0,0 +1,12 @@
+class,support,precision,recall_sensitivity,specificity,f1,auc_ovr,mean_correct_confidence
+AKIEC,61,0.5333333333333333,0.26229508196721313,0.9858156028368794,0.3516483516483517,0.8898799142956799,0.6617746124931628
+BCC,504,0.7884615384615384,0.8134920634920635,0.7977941176470589,0.80078125,0.8928425536881419,0.8012670447719678
+BEN_OTH,9,0.14285714285714285,0.1111111111111111,0.9942252165543792,0.125,0.886963961073682,0.6123372942059995
+BKL,109,0.42,0.3853211009174312,0.9382321618743344,0.4019138755980861,0.7597971685669901,0.6955728497795155
+DF,10,0.5714285714285714,0.4,0.9971098265895953,0.47058823529411764,0.9729287090558767,0.660877049942581
+INF,10,0.3,0.3,0.9932562620423893,0.3,0.916281310211946,0.5683079984552132
+MAL_OTH,2,0.0,0.0,1.0,0.0,0.7036328871892926,
+MEL,90,0.546875,0.3888888888888889,0.9697286012526096,0.45454545454545453,0.8844815588030619,0.7617536458392234
+NV,149,0.7375,0.7919463087248322,0.9532814238042269,0.7637540453074434,0.9608289598435248,0.8438518682537945
+SCCKA,95,0.4357142857142857,0.6421052631578947,0.9171038824763903,0.5191489361702127,0.8974319324018336,0.8198739529874945
+VASC,9,0.6,0.6666666666666666,0.9961501443695862,0.631578947368421,0.9779702705592985,0.7909394450536013

singleenc_pool_meta_sampler05/prediction_summary.json

@@ -0,0 +1,50 @@
+{
+  "rows": 1048,
+  "predicted_class_counts": {
+    "AKIEC": 30,
+    "BCC": 520,
+    "BEN_OTH": 7,
+    "BKL": 100,
+    "DF": 7,
+    "INF": 10,
+    "MAL_OTH": 0,
+    "MEL": 64,
+    "NV": 160,
+    "SCCKA": 140,
+    "VASC": 10
+  },
+  "mean_probability": {
+    "AKIEC": 0.047740478068590164,
+    "BCC": 0.42427435517311096,
+    "BEN_OTH": 0.010617469437420368,
+    "BKL": 0.1232416108250618,
+    "DF": 0.009757091291248798,
+    "INF": 0.011935821734368801,
+    "MAL_OTH": 0.0009750282624736428,
+    "MEL": 0.07275562733411789,
+    "NV": 0.14589694142341614,
+    "SCCKA": 0.14128467440605164,
+    "VASC": 0.011520903557538986
+  },
+  "median_probability": {
+    "AKIEC": 0.006115779280662537,
+    "BCC": 0.3939172625541687,
+    "BEN_OTH": 0.00031108042458072305,
+    "BKL": 0.038408175110816956,
+    "DF": 0.0002367475681239739,
+    "INF": 0.0005242314655333757,
+    "MAL_OTH": 4.6914130507502705e-05,
+    "MEL": 0.0026011166628450155,
+    "NV": 0.0033067455515265465,
+    "SCCKA": 0.016426239162683487,
+    "VASC": 0.00013654018403030932
+  },
+  "mean_confidence": 0.7500953674316406,
+  "median_confidence": 0.7891206741333008,
+  "mean_top1_top2_gap": 0.5957076549530029,
+  "median_top1_top2_gap": 0.6594384908676147,
+  "mean_entropy": 0.7045638561248779,
+  "median_entropy": 0.7079070806503296,
+  "low_confidence_threshold": 0.5,
+  "low_confidence_rows": 152
+}

singleenc_pool_meta_sampler05/run_config.json

@@ -0,0 +1,206 @@
+{
+  "args": {
+    "data_dir": "/marimo/milk10k",
+    "dermoscopic_mask_dir": null,
+    "min_dermoscopic_mask_ratio": 0.01,
+    "clinical_checkpoint": null,
+    "dermoscopic_checkpoint": null,
+    "resume_checkpoint": null,
+    "output_dir": "/marimo/single_encoder_split_runs/singleenc_pool_meta_sampler05",
+    "freeze_epochs": 8,
+    "finetune_epochs": 40,
+    "batch_size": 8,
+    "image_size": 260,
+    "backbone": "efficientnet_b2",
+    "num_workers": 4,
+    "head_lr": 0.0001,
+    "encoder_lr": 1e-05,
+    "metadata_lr": null,
+    "metadata_fusion": "concat",
+    "image_fusion": "shared_encoder_pool",
+    "metadata_gate_hidden_dim": 64,
+    "disable_metadata": false,
+    "freeze_metadata_head": false,
+    "weight_decay": 0.0001,
+    "val_size": 0.2,
+    "synthetic_train_only": false,
+    "augmented_data_dir": null,
+    "augmented_max_per_class": 0,
+    "augmented_classes": [],
+    "zero_augmented_metadata": false,
+    "seed": 42,
+    "branch_dim": 512,
+    "metadata_dim": 64,
+    "classifier_hidden_dim": 512,
+    "classifier_style": "simple",
+    "dropout": 0.3,
+    "logit_fusion_mode": "single",
+    "fusion_logit_weight": 0.6,
+    "clinical_logit_weight": 0.2,
+    "dermoscopic_logit_weight": 0.2,
+    "class_weight": false,
+    "weighted_sampler": true,
+    "sampler_power": 0.5,
+    "balance_mode": "none",
+    "balance_head_ratio": 2.0,
+    "balance_tail_floor": 100,
+    "balance_min_source_count": 20,
+    "loss": "ce",
+    "focal_gamma": 2.0,
+    "dice_weight": 0.3,
+    "f1_weight": 0.3,
+    "f1_ignore_classes": [],
+    "f1_class_weight": [],
+    "ldam_beta": 0.9999,
+    "ldam_max_margin": 0.5,
+    "ldam_drw_start_epoch": 0,
+    "ldam_alpha_max": 10.0,
+    "tail_num_classes": 4,
+    "k_folds": 1,
+    "amp": true,
+    "backbone_backend": "auto",
+    "imagenet_pretrained": true,
+    "selection_metric": "f1_macro",
+    "calibrate_bias": false,
+    "calibration_metric": "dice_macro",
+    "calibration_max_bias": 1.5,
+    "calibration_step": 0.25,
+    "calibration_passes": 3,
+    "patience": 6,
+    "tau": 0.0,
+    "lws_epochs": 0,
+    "lws_lr": 0.01,
+    "lws_sampler_power": 0.5,
+    "lws_min_scale": 0.75,
+    "lws_max_scale": 1.5,
+    "ema": false,
+    "ema_decay": 0.999,
+    "fit_temperature": false
+  },
+  "environment": {
+    "timestamp_utc": "2026-06-23T01:00:23.156648+00:00",
+    "cwd": "/marimo",
+    "command": [
+      "/marimo/code/train_milk10k_effb2_dual_metadata.py",
+      "--data-dir",
+      "/marimo/milk10k",
+      "--backbone",
+      "efficientnet_b2",
+      "--backbone-backend",
+      "auto",
+      "--metadata-fusion",
+      "concat",
+      "--classifier-style",
+      "simple",
+      "--logit-fusion-mode",
+      "single",
+      "--loss",
+      "ce",
+      "--freeze-epochs",
+      "8",
+      "--finetune-epochs",
+      "40",
+      "--batch-size",
+      "8",
+      "--image-size",
+      "260",
+      "--selection-metric",
+      "f1_macro",
+      "--patience",
+      "6",
+      "--num-workers",
+      "4",
+      "--seed",
+      "42",
+      "--amp",
+      "--output-dir",
+      "/marimo/single_encoder_split_runs/singleenc_pool_meta_sampler05",
+      "--image-fusion",
+      "shared_encoder_pool",
+      "--weighted-sampler",
+      "--sampler-power",
+      "0.5"
+    ],
+    "python": "3.13.11 (main, Feb  3 2026, 03:08:54) [GCC 14.2.0]",
+    "platform": "Linux-4.4.0-x86_64-with-glibc2.41",
+    "executable": "/tmp/uv-venv/bin/python",
+    "torch": {
+      "version": "2.12.0+cu130",
+      "cuda_available": true,
+      "cuda_device_count": 1,
+      "cuda_device_name": "NVIDIA RTX PRO 6000 Blackwell Server Edition"
+    },
+    "git": {
+      "available": false
+    }
+  },
+  "class_names": [
+    "AKIEC",
+    "BCC",
+    "BEN_OTH",
+    "BKL",
+    "DF",
+    "INF",
+    "MAL_OTH",
+    "MEL",
+    "NV",
+    "SCCKA",
+    "VASC"
+  ],
+  "label_to_idx": {
+    "AKIEC": 0,
+    "BCC": 1,
+    "BEN_OTH": 2,
+    "BKL": 3,
+    "DF": 4,
+    "INF": 5,
+    "MAL_OTH": 6,
+    "MEL": 7,
+    "NV": 8,
+    "SCCKA": 9,
+    "VASC": 10
+  },
+  "metadata_spec": {
+    "sex_values": [
+      "female",
+      "male",
+      "unknown"
+    ],
+    "site_values": [
+      "foot",
+      "genital",
+      "hand",
+      "head_neck_face",
+      "lower_extremity",
+      "trunk",
+      "unknown",
+      "upper_extremity"
+    ],
+    "monet_columns": [
+      "MONET_erythema",
+      "MONET_gel_water_drop_fluid_dermoscopy_liquid",
+      "MONET_hair",
+      "MONET_pigmented",
+      "MONET_skin_markings_pen_ink_purple_pen",
+      "MONET_ulceration_crust",
+      "MONET_vasculature_vessels"
+    ]
+  },
+  "model_type": "DualEffB2MetadataClassifier",
+  "train_size": 4192,
+  "val_size": 1048,
+  "fold": null,
+  "metadata_fusion": "concat",
+  "image_fusion": "shared_encoder_pool",
+  "clinical_backbone": "timm efficientnet_b2",
+  "dermoscopic_backbone": "timm efficientnet_b2",
+  "paths": {
+    "output_dir": "/marimo/single_encoder_split_runs/singleenc_pool_meta_sampler05",
+    "data_dir": "/marimo/milk10k",
+    "dermoscopic_mask_dir": "None",
+    "clinical_checkpoint": "None",
+    "dermoscopic_checkpoint": "None",
+    "resume_checkpoint": "None",
+    "augmented_data_dir": "None"
+  }
+}

singleenc_pool_meta_sampler05/split_summary.md

@@ -0,0 +1,66 @@
+# Split Summary
+
+## Full
+
+- rows: 5240
+- real_rows: 5240
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 303 | 0 |
+| BCC | 2522 | 0 |
+| BEN_OTH | 44 | 0 |
+| BKL | 544 | 0 |
+| DF | 52 | 0 |
+| INF | 50 | 0 |
+| MAL_OTH | 9 | 0 |
+| MEL | 450 | 0 |
+| NV | 746 | 0 |
+| SCCKA | 473 | 0 |
+| VASC | 47 | 0 |
+
+## Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+## Val
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+- synthetic_train_only: False

singleenc_pool_nometa_clean.predict.log

@@ -0,0 +1,4 @@
+
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+Tail audit DF: predicted_count=7, mean_probability=0.015857, max_probability=0.669113
+Tail audit INF: predicted_count=2, mean_probability=0.012049, max_probability=0.849176
+Saved predictions: /marimo/single_encoder_split_submissions/singleenc_pool_nometa_clean.csv

singleenc_pool_nometa_clean/confusion_analysis.json

@@ -0,0 +1,826 @@
+{
+  "false_negatives_by_true_class": {
+    "AKIEC": [
+      {
+        "true": "AKIEC",
+        "predicted": "BCC",
+        "count": 23,
+        "rate_of_true": 0.3770491803278688
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "BKL",
+        "count": 13,
+        "rate_of_true": 0.21311475409836064
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "SCCKA",
+        "count": 7,
+        "rate_of_true": 0.11475409836065574
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "DF",
+        "count": 2,
+        "rate_of_true": 0.03278688524590164
+      }
+    ],
+    "BCC": [
+      {
+        "true": "BCC",
+        "predicted": "SCCKA",
+        "count": 21,
+        "rate_of_true": 0.041666666666666664
+      },
+      {
+        "true": "BCC",
+        "predicted": "NV",
+        "count": 16,
+        "rate_of_true": 0.031746031746031744
+      },
+      {
+        "true": "BCC",
+        "predicted": "BKL",
+        "count": 12,
+        "rate_of_true": 0.023809523809523808
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 5,
+        "rate_of_true": 0.00992063492063492
+      },
+      {
+        "true": "BCC",
+        "predicted": "MEL",
+        "count": 5,
+        "rate_of_true": 0.00992063492063492
+      },
+      {
+        "true": "BCC",
+        "predicted": "DF",
+        "count": 2,
+        "rate_of_true": 0.003968253968253968
+      },
+      {
+        "true": "BCC",
+        "predicted": "INF",
+        "count": 1,
+        "rate_of_true": 0.001984126984126984
+      },
+      {
+        "true": "BCC",
+        "predicted": "VASC",
+        "count": 1,
+        "rate_of_true": 0.001984126984126984
+      }
+    ],
+    "BEN_OTH": [
+      {
+        "true": "BEN_OTH",
+        "predicted": "BCC",
+        "count": 4,
+        "rate_of_true": 0.4444444444444444
+      },
+      {
+        "true": "BEN_OTH",
+        "predicted": "NV",
+        "count": 2,
+        "rate_of_true": 0.2222222222222222
+      },
+      {
+        "true": "BEN_OTH",
+        "predicted": "BKL",
+        "count": 1,
+        "rate_of_true": 0.1111111111111111
+      },
+      {
+        "true": "BEN_OTH",
+        "predicted": "MEL",
+        "count": 1,
+        "rate_of_true": 0.1111111111111111
+      }
+    ],
+    "BKL": [
+      {
+        "true": "BKL",
+        "predicted": "BCC",
+        "count": 38,
+        "rate_of_true": 0.3486238532110092
+      },
+      {
+        "true": "BKL",
+        "predicted": "MEL",
+        "count": 12,
+        "rate_of_true": 0.11009174311926606
+      },
+      {
+        "true": "BKL",
+        "predicted": "NV",
+        "count": 12,
+        "rate_of_true": 0.11009174311926606
+      },
+      {
+        "true": "BKL",
+        "predicted": "SCCKA",
+        "count": 8,
+        "rate_of_true": 0.07339449541284404
+      },
+      {
+        "true": "BKL",
+        "predicted": "AKIEC",
+        "count": 5,
+        "rate_of_true": 0.045871559633027525
+      },
+      {
+        "true": "BKL",
+        "predicted": "DF",
+        "count": 1,
+        "rate_of_true": 0.009174311926605505
+      },
+      {
+        "true": "BKL",
+        "predicted": "INF",
+        "count": 1,
+        "rate_of_true": 0.009174311926605505
+      }
+    ],
+    "DF": [
+      {
+        "true": "DF",
+        "predicted": "NV",
+        "count": 4,
+        "rate_of_true": 0.4
+      },
+      {
+        "true": "DF",
+        "predicted": "BCC",
+        "count": 3,
+        "rate_of_true": 0.3
+      },
+      {
+        "true": "DF",
+        "predicted": "MEL",
+        "count": 1,
+        "rate_of_true": 0.1
+      },
+      {
+        "true": "DF",
+        "predicted": "VASC",
+        "count": 1,
+        "rate_of_true": 0.1
+      }
+    ],
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+}

singleenc_pool_nometa_clean/confusion_matrix.csv

@@ -0,0 +1,12 @@
+,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
+AKIEC,16,23,0,13,2,0,0,0,0,7,0
+BCC,5,441,0,12,2,1,0,5,16,21,1
+BEN_OTH,0,4,1,1,0,0,0,1,2,0,0
+BKL,5,38,0,32,1,1,0,12,12,8,0
+DF,0,3,0,0,1,0,0,1,4,0,1
+INF,1,5,0,0,2,1,0,0,1,0,0
+MAL_OTH,0,0,0,0,0,1,0,0,0,1,0
+MEL,2,9,0,3,0,0,0,38,36,1,1
+NV,0,7,0,8,1,0,0,16,117,0,0
+SCCKA,3,30,0,8,0,0,0,0,1,53,0
+VASC,0,1,0,0,0,0,0,1,1,0,6

singleenc_pool_nometa_clean/confusion_matrix_raw.csv

@@ -0,0 +1,12 @@
+,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
+AKIEC,16,23,0,13,2,0,0,0,0,7,0
+BCC,5,441,0,12,2,1,0,5,16,21,1
+BEN_OTH,0,4,1,1,0,0,0,1,2,0,0
+BKL,5,38,0,32,1,1,0,12,12,8,0
+DF,0,3,0,0,1,0,0,1,4,0,1
+INF,1,5,0,0,2,1,0,0,1,0,0
+MAL_OTH,0,0,0,0,0,1,0,0,0,1,0
+MEL,2,9,0,3,0,0,0,38,36,1,1
+NV,0,7,0,8,1,0,0,16,117,0,0
+SCCKA,3,30,0,8,0,0,0,0,1,53,0
+VASC,0,1,0,0,0,0,0,1,1,0,6

singleenc_pool_nometa_clean/data_summary.json

@@ -0,0 +1,102 @@
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singleenc_pool_nometa_clean/per_class_metrics.csv

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singleenc_pool_nometa_clean/per_class_metrics_raw.csv

@@ -0,0 +1,12 @@
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singleenc_pool_nometa_clean/prediction_summary.json

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+}

singleenc_pool_nometa_clean/run_config.json

@@ -0,0 +1,204 @@
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+}

singleenc_pool_nometa_clean/run_diagnostics.json

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+      ],
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+        {
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+        {
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+        {
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+      ],
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+        {
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+        {
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+      ],
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+        {
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+        },
+        {
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+      ]
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+        "rate_of_true": 0.4
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+      {
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+        "rate_of_true": 0.10738255033557047
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+      {
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+        "predicted": "BKL",
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+        "rate_of_true": 0.21311475409836064
+      },
+      {
+        "true": "BCC",
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+      },
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+        "rate_of_true": 0.1
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+      {
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+      },
+      {
+        "true": "SCCKA",
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+        "count": 8,
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+      {
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+      },
+      {
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+        "count": 7,
+        "rate_of_true": 0.04697986577181208
+      },
+      {
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+      {
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+        "count": 5,
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+      }
+    ],
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+        "true": "BCC",
+        "predicted": "SCCKA",
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+        "rate_of_true": 0.041666666666666664
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+        "rate_of_true": 0.023809523809523808
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+      {
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+        "rate_of_true": 0.07339449541284404
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+      {
+        "true": "SCCKA",
+        "predicted": "BKL",
+        "count": 8,
+        "rate_of_true": 0.08421052631578947
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "SCCKA",
+        "count": 7,
+        "rate_of_true": 0.11475409836065574
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 5,
+        "rate_of_true": 0.00992063492063492
+      },
+      {
+        "true": "INF",
+        "predicted": "BCC",
+        "count": 5,
+        "rate_of_true": 0.5
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "AKIEC",
+        "count": 3,
+        "rate_of_true": 0.031578947368421054
+      },
+      {
+        "true": "INF",
+        "predicted": "NV",
+        "count": 1,
+        "rate_of_true": 0.1
+      }
+    ]
+  }
+}

singleenc_pool_nometa_clean/run_report.md

@@ -0,0 +1,160 @@
+# MILK10k Run Report
+
+## Config Summary
+
+- fold: None
+- output_dir: /marimo/single_encoder_split_runs/singleenc_pool_nometa_clean
+- backbone: efficientnet_b2
+- metadata_fusion: concat
+- image_fusion: shared_encoder_pool
+- loss: ce
+- class_weight: False
+- weighted_sampler: False
+- balance_mode: none
+- balance_head_ratio: 2.0
+- balance_tail_floor: 100
+- balance_min_source_count: 20
+- augmented_data_dir: None
+- dermoscopic_mask_dir: None
+- min_dermoscopic_mask_ratio: 0.01
+- augmented_classes: []
+- augmented_max_per_class: 0
+- freeze_metadata_head: False
+- zero_augmented_metadata: False
+
+## Final Metrics
+
+- accuracy: 0.6736641221374046
+- balanced_accuracy: 0.3794547908899595
+- dice_macro: 0.3958818744094628
+- f1_macro: 0.3958818744094628
+- roc_auc_macro_ovr: 0.8654417583052901
+- top2_accuracy: 0.8234732824427481
+- top3_accuracy: 0.9112595419847328
+
+## Data Distribution
+
+### Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+### Validation
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+## Per-Class Metrics
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| AKIEC | 61 | 0.5 | 0.262295 | 0.983789 | 0.344086 | 0.910808 | 0.684883 |
+| BCC | 504 | 0.786096 | 0.875 | 0.779412 | 0.828169 | 0.912669 | 0.880699 |
+| BEN_OTH | 9 | 1 | 0.111111 | 1 | 0.2 | 0.857876 | 0.808157 |
+| BKL | 109 | 0.415584 | 0.293578 | 0.952077 | 0.344086 | 0.788893 | 0.70871 |
+| DF | 10 | 0.111111 | 0.1 | 0.992293 | 0.105263 | 0.855588 | 0.462921 |
+| INF | 10 | 0.25 | 0.1 | 0.99711 | 0.142857 | 0.862524 | 0.321197 |
+| MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.696463 |  |
+| MEL | 90 | 0.513514 | 0.422222 | 0.962422 | 0.463415 | 0.861355 | 0.767756 |
+| NV | 149 | 0.615789 | 0.785235 | 0.918799 | 0.690265 | 0.94489 | 0.880288 |
+| SCCKA | 95 | 0.582418 | 0.557895 | 0.960126 | 0.569892 | 0.919158 | 0.829929 |
+| VASC | 9 | 0.666667 | 0.666667 | 0.997113 | 0.666667 | 0.909635 | 0.868661 |
+
+## Weak Classes
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.696463 |  |
+| DF | 10 | 0.111111 | 0.1 | 0.992293 | 0.105263 | 0.855588 | 0.462921 |
+| INF | 10 | 0.25 | 0.1 | 0.99711 | 0.142857 | 0.862524 | 0.321197 |
+| BEN_OTH | 9 | 1 | 0.111111 | 1 | 0.2 | 0.857876 | 0.808157 |
+| AKIEC | 61 | 0.5 | 0.262295 | 0.983789 | 0.344086 | 0.910808 | 0.684883 |
+
+## Prediction Distribution
+
+| class | pred_count | mean_prob |
+|---|---:|---:|
+| AKIEC | 32 | 0.0417 |
+| BCC | 561 | 0.4866 |
+| BEN_OTH | 1 | 0.0077 |
+| BKL | 77 | 0.0911 |
+| DF | 9 | 0.0122 |
+| INF | 4 | 0.0098 |
+| MAL_OTH | 0 | 0.0006 |
+| MEL | 74 | 0.0768 |
+| NV | 190 | 0.1770 |
+| SCCKA | 91 | 0.0871 |
+| VASC | 9 | 0.0094 |
+
+- mean_confidence: 0.7948505878448486
+- median_confidence: 0.8715876936912537
+- mean_top1_top2_gap: 0.6747757196426392
+- mean_entropy: 0.6077224016189575
+- low_confidence_rows: 129
+
+## Top Confusion Pairs
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BKL | BCC | 38 | 0.349 |
+| MEL | NV | 36 | 0.400 |
+| SCCKA | BCC | 30 | 0.316 |
+| AKIEC | BCC | 23 | 0.377 |
+| BCC | SCCKA | 21 | 0.042 |
+| BCC | NV | 16 | 0.032 |
+| NV | MEL | 16 | 0.107 |
+| AKIEC | BKL | 13 | 0.213 |
+| BCC | BKL | 12 | 0.024 |
+| BKL | MEL | 12 | 0.110 |
+| BKL | NV | 12 | 0.110 |
+| MEL | BCC | 9 | 0.100 |
+
+## Watched Confusion Patterns
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BCC | SCCKA | 21 | 0.042 |
+| BCC | BKL | 12 | 0.024 |
+| BKL | SCCKA | 8 | 0.073 |
+| SCCKA | BKL | 8 | 0.084 |
+| AKIEC | SCCKA | 7 | 0.115 |
+| BCC | AKIEC | 5 | 0.010 |
+| INF | BCC | 5 | 0.500 |
+| SCCKA | AKIEC | 3 | 0.032 |
+| INF | NV | 1 | 0.100 |
+
+## Warnings
+
+- [medium] tiny_validation_support: MAL_OTH validation support is only 2.

singleenc_pool_nometa_clean/split_summary.md

@@ -0,0 +1,66 @@
+# Split Summary
+
+## Full
+
+- rows: 5240
+- real_rows: 5240
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 303 | 0 |
+| BCC | 2522 | 0 |
+| BEN_OTH | 44 | 0 |
+| BKL | 544 | 0 |
+| DF | 52 | 0 |
+| INF | 50 | 0 |
+| MAL_OTH | 9 | 0 |
+| MEL | 450 | 0 |
+| NV | 746 | 0 |
+| SCCKA | 473 | 0 |
+| VASC | 47 | 0 |
+
+## Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+## Val
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+- synthetic_train_only: False