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  1. singleenc_canvas_meta_clean.predict.log +3 -3
  2. singleenc_canvas_meta_clean.train.log +0 -0
  3. singleenc_canvas_meta_clean/confusion_analysis.json +286 -221
  4. singleenc_canvas_meta_clean/confusion_matrix.csv +9 -9
  5. singleenc_canvas_meta_clean/confusion_matrix_raw.csv +9 -9
  6. singleenc_canvas_meta_clean/history.csv +0 -0
  7. singleenc_canvas_meta_clean/metrics.json +335 -335
  8. singleenc_canvas_meta_clean/per_class_metrics.csv +11 -11
  9. singleenc_canvas_meta_clean/per_class_metrics_raw.csv +11 -11
  10. singleenc_canvas_meta_clean/prediction_summary.json +39 -39
  11. singleenc_canvas_meta_clean/raw/val_predictions.csv +0 -0
  12. singleenc_canvas_meta_clean/run_config.json +3 -3
  13. singleenc_canvas_meta_clean/run_diagnostics.json +325 -260
  14. singleenc_canvas_meta_clean/run_report.md +57 -56
  15. singleenc_canvas_meta_clean/val_predictions.csv +0 -0
  16. singleenc_canvas_nometa_clean.predict.log +3 -3
  17. singleenc_canvas_nometa_clean.train.log +0 -0
  18. singleenc_canvas_nometa_clean/confusion_matrix.csv +10 -10
  19. singleenc_canvas_nometa_clean/confusion_matrix_raw.csv +10 -10
  20. singleenc_canvas_nometa_clean/history.csv +0 -0
  21. singleenc_canvas_nometa_clean/metrics.json +308 -308
  22. singleenc_canvas_nometa_clean/per_class_metrics.csv +11 -11
  23. singleenc_canvas_nometa_clean/per_class_metrics_raw.csv +11 -11
  24. singleenc_canvas_nometa_clean/prediction_summary.json +37 -37
  25. singleenc_canvas_nometa_clean/run_config.json +3 -3
  26. singleenc_canvas_nometa_clean/val_predictions.csv +0 -0
  27. singleenc_pool_meta_clean.predict.log +3 -3
  28. singleenc_pool_meta_clean.train.log +0 -0
  29. singleenc_pool_meta_clean/confusion_analysis.json +245 -264
  30. singleenc_pool_meta_clean/confusion_matrix.csv +9 -9
  31. singleenc_pool_meta_clean/confusion_matrix_raw.csv +9 -9
  32. singleenc_pool_meta_clean/history.csv +0 -0
  33. singleenc_pool_meta_clean/metrics.json +344 -344
  34. singleenc_pool_meta_clean/per_class_metrics.csv +11 -11
  35. singleenc_pool_meta_clean/per_class_metrics_raw.csv +11 -11
  36. singleenc_pool_meta_clean/prediction_summary.json +38 -38
  37. singleenc_pool_meta_clean/raw/val_predictions.csv +0 -0
  38. singleenc_pool_meta_clean/run_config.json +3 -3
  39. singleenc_pool_meta_clean/run_diagnostics.json +283 -302
  40. singleenc_pool_meta_clean/run_report.md +59 -60
  41. singleenc_pool_meta_clean/val_predictions.csv +0 -0
singleenc_canvas_meta_clean.predict.log CHANGED
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  Saved predictions: /marimo/single_encoder_split_submissions/singleenc_canvas_meta_clean.csv
 
 
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+ Tail audit DF: predicted_count=3, mean_probability=0.006831, max_probability=0.962322
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+ Tail audit INF: predicted_count=5, mean_probability=0.006370, max_probability=0.605657
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  Saved predictions: /marimo/single_encoder_split_submissions/singleenc_canvas_meta_clean.csv
singleenc_canvas_meta_clean.train.log CHANGED
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singleenc_canvas_meta_clean/confusion_analysis.json CHANGED
@@ -3,41 +3,41 @@
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  "predicted": "BEN_OTH",
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@@ -93,35 +105,35 @@
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@@ -129,12 +141,6 @@
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@@ -168,20 +180,38 @@
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- "rate_of_predicted": 0.13043478260869565
500
  },
501
  {
502
  "predicted": "SCCKA",
503
- "true": "BKL",
504
- "count": 12,
505
- "rate_of_predicted": 0.13043478260869565
 
 
 
 
 
 
506
  }
507
  ],
508
  "VASC": [
 
 
 
 
 
 
509
  {
510
  "predicted": "VASC",
511
  "true": "MEL",
512
  "count": 1,
513
- "rate_of_predicted": 0.2
 
 
 
 
 
 
514
  }
515
  ]
516
  },
@@ -518,98 +577,104 @@
518
  {
519
  "true": "BKL",
520
  "predicted": "BCC",
521
- "count": 36,
522
- "rate_of_true": 0.3302752293577982
523
- },
524
- {
525
- "true": "SCCKA",
526
- "predicted": "BCC",
527
- "count": 30,
528
- "rate_of_true": 0.3157894736842105
529
  },
530
  {
531
  "true": "MEL",
532
  "predicted": "NV",
533
- "count": 26,
534
- "rate_of_true": 0.28888888888888886
535
  },
536
  {
537
- "true": "BCC",
538
- "predicted": "SCCKA",
539
- "count": 18,
540
- "rate_of_true": 0.03571428571428571
541
  },
542
  {
543
  "true": "AKIEC",
544
- "predicted": "BCC",
545
  "count": 14,
546
  "rate_of_true": 0.22950819672131148
547
  },
548
  {
549
  "true": "NV",
550
  "predicted": "MEL",
551
- "count": 14,
552
- "rate_of_true": 0.09395973154362416
553
- },
554
- {
555
- "true": "NV",
556
- "predicted": "BKL",
557
  "count": 13,
558
  "rate_of_true": 0.087248322147651
559
  },
560
  {
561
- "true": "AKIEC",
562
  "predicted": "SCCKA",
563
  "count": 12,
564
- "rate_of_true": 0.19672131147540983
565
  },
566
  {
567
- "true": "BKL",
 
 
 
 
 
 
568
  "predicted": "SCCKA",
569
- "count": 12,
570
- "rate_of_true": 0.11009174311926606
571
  },
572
  {
573
- "true": "AKIEC",
574
  "predicted": "BKL",
575
- "count": 10,
576
- "rate_of_true": 0.16393442622950818
577
  },
578
  {
579
- "true": "MEL",
 
 
 
 
 
 
580
  "predicted": "BKL",
581
  "count": 9,
582
- "rate_of_true": 0.1
583
  },
584
  {
585
  "true": "MEL",
586
  "predicted": "BCC",
 
 
 
 
 
 
587
  "count": 8,
588
- "rate_of_true": 0.08888888888888889
589
  },
590
  {
591
  "true": "SCCKA",
592
- "predicted": "BKL",
593
  "count": 8,
594
  "rate_of_true": 0.08421052631578947
595
  },
596
  {
597
  "true": "SCCKA",
598
- "predicted": "AKIEC",
599
- "count": 7,
600
- "rate_of_true": 0.07368421052631578
601
  },
602
  {
603
- "true": "BCC",
604
- "predicted": "AKIEC",
605
  "count": 6,
606
- "rate_of_true": 0.011904761904761904
607
  },
608
  {
609
- "true": "BCC",
610
- "predicted": "BKL",
611
  "count": 6,
612
- "rate_of_true": 0.011904761904761904
613
  },
614
  {
615
  "true": "BKL",
@@ -618,36 +683,24 @@
618
  "rate_of_true": 0.05504587155963303
619
  },
620
  {
621
- "true": "INF",
622
- "predicted": "BCC",
623
  "count": 6,
624
- "rate_of_true": 0.6
625
  },
626
  {
627
  "true": "BCC",
628
  "predicted": "MEL",
629
  "count": 5,
630
  "rate_of_true": 0.00992063492063492
631
- },
632
- {
633
- "true": "BKL",
634
- "predicted": "AKIEC",
635
- "count": 5,
636
- "rate_of_true": 0.045871559633027525
637
  }
638
  ],
639
  "watched_confusion_patterns": [
640
- {
641
- "true": "BCC",
642
- "predicted": "SCCKA",
643
- "count": 18,
644
- "rate_of_true": 0.03571428571428571
645
- },
646
  {
647
  "true": "AKIEC",
648
  "predicted": "SCCKA",
649
- "count": 12,
650
- "rate_of_true": 0.19672131147540983
651
  },
652
  {
653
  "true": "BKL",
@@ -656,40 +709,52 @@
656
  "rate_of_true": 0.11009174311926606
657
  },
658
  {
659
- "true": "SCCKA",
660
- "predicted": "BKL",
661
- "count": 8,
662
- "rate_of_true": 0.08421052631578947
663
  },
664
  {
665
- "true": "SCCKA",
666
- "predicted": "AKIEC",
667
- "count": 7,
668
- "rate_of_true": 0.07368421052631578
669
  },
670
  {
671
  "true": "BCC",
 
 
 
 
 
 
672
  "predicted": "AKIEC",
673
- "count": 6,
674
- "rate_of_true": 0.011904761904761904
675
  },
676
  {
677
- "true": "BCC",
678
  "predicted": "BKL",
679
- "count": 6,
680
- "rate_of_true": 0.011904761904761904
681
  },
682
  {
683
  "true": "INF",
684
  "predicted": "BCC",
685
- "count": 6,
686
- "rate_of_true": 0.6
687
  },
688
  {
689
  "true": "INF",
690
  "predicted": "NV",
691
  "count": 3,
692
  "rate_of_true": 0.3
 
 
 
 
 
 
693
  }
694
  ]
695
  }
 
3
  "AKIEC": [
4
  {
5
  "true": "AKIEC",
6
+ "predicted": "SCCKA",
7
  "count": 14,
8
  "rate_of_true": 0.22950819672131148
9
  },
10
  {
11
  "true": "AKIEC",
12
+ "predicted": "BCC",
13
+ "count": 9,
14
+ "rate_of_true": 0.14754098360655737
15
  },
16
  {
17
  "true": "AKIEC",
18
  "predicted": "BKL",
19
+ "count": 6,
20
+ "rate_of_true": 0.09836065573770492
21
  }
22
  ],
23
  "BCC": [
24
  {
25
  "true": "BCC",
26
+ "predicted": "AKIEC",
27
+ "count": 11,
28
+ "rate_of_true": 0.021825396825396824
29
  },
30
  {
31
  "true": "BCC",
32
+ "predicted": "SCCKA",
33
+ "count": 11,
34
+ "rate_of_true": 0.021825396825396824
35
  },
36
  {
37
  "true": "BCC",
38
  "predicted": "BKL",
39
+ "count": 9,
40
+ "rate_of_true": 0.017857142857142856
41
  },
42
  {
43
  "true": "BCC",
 
48
  {
49
  "true": "BCC",
50
  "predicted": "BEN_OTH",
51
+ "count": 3,
52
+ "rate_of_true": 0.005952380952380952
53
+ },
54
+ {
55
+ "true": "BCC",
56
+ "predicted": "NV",
57
+ "count": 3,
58
+ "rate_of_true": 0.005952380952380952
59
+ },
60
+ {
61
+ "true": "BCC",
62
+ "predicted": "VASC",
63
+ "count": 1,
64
+ "rate_of_true": 0.001984126984126984
65
  }
66
  ],
67
  "BEN_OTH": [
68
  {
69
  "true": "BEN_OTH",
70
  "predicted": "BCC",
71
+ "count": 3,
72
+ "rate_of_true": 0.3333333333333333
73
  },
74
  {
75
  "true": "BEN_OTH",
 
94
  {
95
  "true": "BKL",
96
  "predicted": "BCC",
97
+ "count": 31,
98
+ "rate_of_true": 0.28440366972477066
99
  },
100
  {
101
  "true": "BKL",
 
105
  },
106
  {
107
  "true": "BKL",
108
+ "predicted": "AKIEC",
109
+ "count": 8,
110
+ "rate_of_true": 0.07339449541284404
111
  },
112
  {
113
  "true": "BKL",
114
+ "predicted": "MEL",
115
+ "count": 6,
116
+ "rate_of_true": 0.05504587155963303
117
  },
118
  {
119
  "true": "BKL",
120
+ "predicted": "NV",
121
+ "count": 6,
122
+ "rate_of_true": 0.05504587155963303
123
  },
124
  {
125
  "true": "BKL",
126
+ "predicted": "BEN_OTH",
127
+ "count": 1,
128
+ "rate_of_true": 0.009174311926605505
129
  }
130
  ],
131
  "DF": [
132
  {
133
  "true": "DF",
134
  "predicted": "BCC",
135
+ "count": 4,
136
+ "rate_of_true": 0.4
137
  },
138
  {
139
  "true": "DF",
 
141
  "count": 1,
142
  "rate_of_true": 0.1
143
  },
 
 
 
 
 
 
144
  {
145
  "true": "DF",
146
  "predicted": "NV",
 
152
  {
153
  "true": "INF",
154
  "predicted": "BCC",
155
+ "count": 5,
156
+ "rate_of_true": 0.5
157
  },
158
  {
159
  "true": "INF",
160
  "predicted": "NV",
161
  "count": 3,
162
  "rate_of_true": 0.3
163
+ },
164
+ {
165
+ "true": "INF",
166
+ "predicted": "BEN_OTH",
167
+ "count": 1,
168
+ "rate_of_true": 0.1
169
  }
170
  ],
171
  "MAL_OTH": [
 
180
  {
181
  "true": "MEL",
182
  "predicted": "NV",
183
+ "count": 25,
184
+ "rate_of_true": 0.2777777777777778
185
  },
186
  {
187
  "true": "MEL",
188
+ "predicted": "BCC",
189
  "count": 9,
190
  "rate_of_true": 0.1
191
  },
192
  {
193
  "true": "MEL",
194
+ "predicted": "BKL",
195
+ "count": 6,
196
+ "rate_of_true": 0.06666666666666667
197
+ },
198
+ {
199
+ "true": "MEL",
200
+ "predicted": "SCCKA",
201
+ "count": 2,
202
+ "rate_of_true": 0.022222222222222223
203
+ },
204
+ {
205
+ "true": "MEL",
206
+ "predicted": "AKIEC",
207
+ "count": 1,
208
+ "rate_of_true": 0.011111111111111112
209
+ },
210
+ {
211
+ "true": "MEL",
212
+ "predicted": "BEN_OTH",
213
+ "count": 1,
214
+ "rate_of_true": 0.011111111111111112
215
  },
216
  {
217
  "true": "MEL",
 
230
  {
231
  "true": "NV",
232
  "predicted": "MEL",
233
+ "count": 13,
234
+ "rate_of_true": 0.087248322147651
235
  },
236
  {
237
  "true": "NV",
238
  "predicted": "BKL",
239
+ "count": 11,
240
+ "rate_of_true": 0.0738255033557047
241
  },
242
  {
243
  "true": "NV",
 
247
  },
248
  {
249
  "true": "NV",
250
+ "predicted": "VASC",
251
  "count": 1,
252
  "rate_of_true": 0.006711409395973154
253
  }
 
256
  {
257
  "true": "SCCKA",
258
  "predicted": "BCC",
259
+ "count": 24,
260
+ "rate_of_true": 0.25263157894736843
261
  },
262
  {
263
  "true": "SCCKA",
264
+ "predicted": "AKIEC",
265
  "count": 8,
266
  "rate_of_true": 0.08421052631578947
267
  },
268
  {
269
  "true": "SCCKA",
270
+ "predicted": "BKL",
271
+ "count": 8,
272
+ "rate_of_true": 0.08421052631578947
273
  }
274
  ],
275
  "VASC": [
 
291
  "AKIEC": [
292
  {
293
  "predicted": "AKIEC",
294
+ "true": "BCC",
295
+ "count": 11,
296
+ "rate_of_predicted": 0.18333333333333332
297
  },
298
  {
299
  "predicted": "AKIEC",
300
+ "true": "BKL",
301
+ "count": 8,
302
+ "rate_of_predicted": 0.13333333333333333
303
  },
304
  {
305
  "predicted": "AKIEC",
306
+ "true": "SCCKA",
307
+ "count": 8,
308
+ "rate_of_predicted": 0.13333333333333333
309
+ },
310
+ {
311
+ "predicted": "AKIEC",
312
+ "true": "MEL",
313
+ "count": 1,
314
+ "rate_of_predicted": 0.016666666666666666
315
  }
316
  ],
317
  "BCC": [
318
  {
319
  "predicted": "BCC",
320
  "true": "BKL",
321
+ "count": 31,
322
+ "rate_of_predicted": 0.055855855855855854
323
  },
324
  {
325
  "predicted": "BCC",
326
  "true": "SCCKA",
327
+ "count": 24,
328
+ "rate_of_predicted": 0.043243243243243246
329
  },
330
  {
331
  "predicted": "BCC",
332
  "true": "AKIEC",
333
+ "count": 9,
334
+ "rate_of_predicted": 0.016216216216216217
335
  },
336
  {
337
  "predicted": "BCC",
338
  "true": "MEL",
339
+ "count": 9,
340
+ "rate_of_predicted": 0.016216216216216217
341
  },
342
  {
343
  "predicted": "BCC",
344
  "true": "INF",
345
+ "count": 5,
346
+ "rate_of_predicted": 0.009009009009009009
347
  },
348
  {
349
  "predicted": "BCC",
350
+ "true": "DF",
351
  "count": 4,
352
+ "rate_of_predicted": 0.007207207207207207
353
  },
354
  {
355
  "predicted": "BCC",
356
  "true": "NV",
357
  "count": 4,
358
+ "rate_of_predicted": 0.007207207207207207
359
  },
360
  {
361
  "predicted": "BCC",
362
+ "true": "BEN_OTH",
363
  "count": 3,
364
+ "rate_of_predicted": 0.005405405405405406
365
  },
366
  {
367
  "predicted": "BCC",
368
  "true": "VASC",
369
  "count": 3,
370
+ "rate_of_predicted": 0.005405405405405406
371
  },
372
  {
373
  "predicted": "BCC",
374
  "true": "MAL_OTH",
375
  "count": 2,
376
+ "rate_of_predicted": 0.0036036036036036037
377
  }
378
  ],
379
  "BEN_OTH": [
380
  {
381
  "predicted": "BEN_OTH",
382
  "true": "BCC",
383
+ "count": 3,
384
+ "rate_of_predicted": 0.375
385
+ },
386
+ {
387
+ "predicted": "BEN_OTH",
388
+ "true": "BKL",
389
+ "count": 1,
390
+ "rate_of_predicted": 0.125
391
+ },
392
+ {
393
+ "predicted": "BEN_OTH",
394
+ "true": "INF",
395
+ "count": 1,
396
+ "rate_of_predicted": 0.125
397
+ },
398
+ {
399
+ "predicted": "BEN_OTH",
400
+ "true": "MEL",
401
+ "count": 1,
402
+ "rate_of_predicted": 0.125
403
  }
404
  ],
405
  "BKL": [
406
  {
407
  "predicted": "BKL",
408
  "true": "NV",
409
+ "count": 11,
410
+ "rate_of_predicted": 0.125
411
  },
412
  {
413
  "predicted": "BKL",
414
+ "true": "BCC",
 
 
 
 
 
 
415
  "count": 9,
416
+ "rate_of_predicted": 0.10227272727272728
417
  },
418
  {
419
  "predicted": "BKL",
420
  "true": "SCCKA",
421
  "count": 8,
422
+ "rate_of_predicted": 0.09090909090909091
423
  },
424
  {
425
  "predicted": "BKL",
426
+ "true": "AKIEC",
427
+ "count": 6,
428
+ "rate_of_predicted": 0.06818181818181818
429
+ },
430
+ {
431
+ "predicted": "BKL",
432
+ "true": "MEL",
433
  "count": 6,
434
+ "rate_of_predicted": 0.06818181818181818
435
  },
436
  {
437
  "predicted": "BKL",
438
  "true": "BEN_OTH",
439
  "count": 2,
440
+ "rate_of_predicted": 0.022727272727272728
441
  },
442
  {
443
  "predicted": "BKL",
444
  "true": "DF",
445
  "count": 1,
446
+ "rate_of_predicted": 0.011363636363636364
 
 
 
 
 
 
 
 
447
  }
448
  ],
449
+ "DF": [],
450
  "INF": [
 
 
 
 
 
 
451
  {
452
  "predicted": "INF",
453
  "true": "MEL",
454
  "count": 1,
455
+ "rate_of_predicted": 0.5
456
  }
457
  ],
458
  "MAL_OTH": [],
 
460
  {
461
  "predicted": "MEL",
462
  "true": "NV",
463
+ "count": 13,
464
+ "rate_of_predicted": 0.18840579710144928
465
  },
466
  {
467
  "predicted": "MEL",
468
+ "true": "BKL",
469
+ "count": 6,
470
+ "rate_of_predicted": 0.08695652173913043
471
  },
472
  {
473
  "predicted": "MEL",
474
+ "true": "BCC",
475
  "count": 5,
476
+ "rate_of_predicted": 0.07246376811594203
477
  },
478
  {
479
  "predicted": "MEL",
480
  "true": "BEN_OTH",
481
  "count": 1,
482
+ "rate_of_predicted": 0.014492753623188406
 
 
 
 
 
 
483
  }
484
  ],
485
  "NV": [
486
  {
487
  "predicted": "NV",
488
  "true": "MEL",
489
+ "count": 25,
490
+ "rate_of_predicted": 0.15527950310559005
491
  },
492
  {
493
  "predicted": "NV",
494
  "true": "BKL",
495
  "count": 6,
496
+ "rate_of_predicted": 0.037267080745341616
497
+ },
498
+ {
499
+ "predicted": "NV",
500
+ "true": "BCC",
501
+ "count": 3,
502
+ "rate_of_predicted": 0.018633540372670808
503
  },
504
  {
505
  "predicted": "NV",
506
  "true": "INF",
507
  "count": 3,
508
+ "rate_of_predicted": 0.018633540372670808
509
  },
510
  {
511
  "predicted": "NV",
512
  "true": "VASC",
513
  "count": 2,
514
+ "rate_of_predicted": 0.012422360248447204
515
  },
516
  {
517
  "predicted": "NV",
518
  "true": "BEN_OTH",
519
  "count": 1,
520
+ "rate_of_predicted": 0.006211180124223602
521
  },
522
  {
523
  "predicted": "NV",
524
  "true": "DF",
525
  "count": 1,
526
+ "rate_of_predicted": 0.006211180124223602
527
  }
528
  ],
529
  "SCCKA": [
530
  {
531
  "predicted": "SCCKA",
532
+ "true": "AKIEC",
533
+ "count": 14,
534
+ "rate_of_predicted": 0.14893617021276595
535
  },
536
  {
537
  "predicted": "SCCKA",
538
+ "true": "BKL",
539
  "count": 12,
540
+ "rate_of_predicted": 0.1276595744680851
541
  },
542
  {
543
  "predicted": "SCCKA",
544
+ "true": "BCC",
545
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singleenc_canvas_meta_clean/history.csv CHANGED
The diff for this file is too large to render. See raw diff
 
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singleenc_canvas_meta_clean/raw/val_predictions.csv CHANGED
The diff for this file is too large to render. See raw diff
 
singleenc_canvas_meta_clean/run_config.json CHANGED
@@ -7,7 +7,7 @@
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217
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- "count": 26,
232
- "rate_of_true": 0.28888888888888886
233
  },
234
  {
235
  "true": "MEL",
236
- "predicted": "BKL",
237
  "count": 9,
238
  "rate_of_true": 0.1
239
  },
240
  {
241
  "true": "MEL",
242
- "predicted": "BCC",
243
- "count": 8,
244
- "rate_of_true": 0.08888888888888889
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
245
  },
246
  {
247
  "true": "MEL",
@@ -260,14 +290,14 @@
260
  {
261
  "true": "NV",
262
  "predicted": "MEL",
263
- "count": 14,
264
- "rate_of_true": 0.09395973154362416
265
  },
266
  {
267
  "true": "NV",
268
  "predicted": "BKL",
269
- "count": 13,
270
- "rate_of_true": 0.087248322147651
271
  },
272
  {
273
  "true": "NV",
@@ -277,7 +307,7 @@
277
  },
278
  {
279
  "true": "NV",
280
- "predicted": "DF",
281
  "count": 1,
282
  "rate_of_true": 0.006711409395973154
283
  }
@@ -286,20 +316,20 @@
286
  {
287
  "true": "SCCKA",
288
  "predicted": "BCC",
289
- "count": 30,
290
- "rate_of_true": 0.3157894736842105
291
  },
292
  {
293
  "true": "SCCKA",
294
- "predicted": "BKL",
295
  "count": 8,
296
  "rate_of_true": 0.08421052631578947
297
  },
298
  {
299
  "true": "SCCKA",
300
- "predicted": "AKIEC",
301
- "count": 7,
302
- "rate_of_true": 0.07368421052631578
303
  }
304
  ],
305
  "VASC": [
@@ -321,157 +351,168 @@
321
  "AKIEC": [
322
  {
323
  "predicted": "AKIEC",
324
- "true": "SCCKA",
325
- "count": 7,
326
- "rate_of_predicted": 0.16279069767441862
327
  },
328
  {
329
  "predicted": "AKIEC",
330
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331
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332
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333
  },
334
  {
335
  "predicted": "AKIEC",
336
- "true": "BKL",
337
- "count": 5,
338
- "rate_of_predicted": 0.11627906976744186
 
 
 
 
 
 
339
  }
340
  ],
341
  "BCC": [
342
  {
343
  "predicted": "BCC",
344
  "true": "BKL",
345
- "count": 36,
346
- "rate_of_predicted": 0.06239168110918544
347
  },
348
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349
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350
  "true": "SCCKA",
351
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352
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353
  },
354
  {
355
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356
  "true": "AKIEC",
357
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358
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359
  },
360
  {
361
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362
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363
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  },
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367
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368
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369
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371
  },
372
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373
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374
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375
  "count": 4,
376
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  },
378
  {
379
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380
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381
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382
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383
  },
384
  {
385
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386
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389
  },
390
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391
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392
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  },
396
  {
397
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398
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399
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400
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401
  }
402
  ],
403
  "BEN_OTH": [
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  {
405
  "predicted": "BEN_OTH",
406
  "true": "BCC",
407
- "count": 2,
408
- "rate_of_predicted": 0.6666666666666666
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
409
  }
410
  ],
411
  "BKL": [
412
  {
413
  "predicted": "BKL",
414
  "true": "NV",
415
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416
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  },
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420
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426
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431
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435
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437
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438
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439
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441
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443
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444
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450
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453
- }
454
- ],
455
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456
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457
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458
- "true": "NV",
459
- "count": 1,
460
- "rate_of_predicted": 0.2
461
  }
462
  ],
 
463
  "INF": [
464
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465
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466
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467
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468
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470
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471
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472
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473
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474
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475
  }
476
  ],
477
  "MAL_OTH": [],
@@ -479,98 +520,116 @@
479
  {
480
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481
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482
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484
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485
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487
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499
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500
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505
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506
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508
  }
509
  ],
510
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  {
512
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513
  "true": "MEL",
514
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515
- "rate_of_predicted": 0.16666666666666666
516
  },
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518
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519
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520
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522
  },
523
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524
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525
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526
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527
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529
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530
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531
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534
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536
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537
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541
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543
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544
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545
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546
  }
547
  ],
548
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  {
550
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551
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552
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554
  },
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557
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562
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563
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564
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565
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566
  }
567
  ],
568
  "VASC": [
 
 
 
 
 
 
569
  {
570
  "predicted": "VASC",
571
  "true": "MEL",
572
  "count": 1,
573
- "rate_of_predicted": 0.2
 
 
 
 
 
 
574
  }
575
  ]
576
  },
@@ -578,98 +637,104 @@
578
  {
579
  "true": "BKL",
580
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581
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583
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589
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590
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619
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623
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626
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628
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629
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631
  },
632
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634
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635
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637
  },
638
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639
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640
  "predicted": "BKL",
641
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642
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643
  },
644
  {
645
  "true": "MEL",
646
  "predicted": "BCC",
 
 
 
 
 
 
647
  "count": 8,
648
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649
  },
650
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651
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655
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657
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658
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661
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664
- "predicted": "AKIEC",
665
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671
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673
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674
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675
  "true": "BKL",
@@ -678,36 +743,24 @@
678
  "rate_of_true": 0.05504587155963303
679
  },
680
  {
681
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682
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  },
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691
- },
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695
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697
  }
698
  ],
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  "watched_confusion_patterns": [
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702
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709
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713
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@@ -716,40 +769,52 @@
716
  "rate_of_true": 0.11009174311926606
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719
- "true": "SCCKA",
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727
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729
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730
  {
731
  "true": "BCC",
 
 
 
 
 
 
732
  "predicted": "AKIEC",
733
- "count": 6,
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- "rate_of_true": 0.011904761904761904
735
  },
736
  {
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738
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739
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741
  },
742
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743
  "true": "INF",
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  },
748
  {
749
  "true": "INF",
750
  "predicted": "NV",
751
  "count": 3,
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  "rate_of_true": 0.3
 
 
 
 
 
 
753
  }
754
  ]
755
  }
 
11
  "prediction_summary": {
12
  "rows": 1048,
13
  "predicted_class_counts": {
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+ "AKIEC": 60,
15
+ "BCC": 555,
16
+ "BEN_OTH": 8,
17
+ "BKL": 88,
18
+ "DF": 4,
19
+ "INF": 2,
20
  "MAL_OTH": 0,
21
+ "MEL": 69,
22
+ "NV": 161,
23
+ "SCCKA": 94,
24
+ "VASC": 7
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  },
26
  "mean_probability": {
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+ "AKIEC": 0.058696091175079346,
28
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30
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+ "INF": 0.0037003764882683754,
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38
  },
39
  "median_probability": {
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41
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+ "BEN_OTH": 3.6757115594809875e-05,
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+ "DF": 3.0308361601782963e-05,
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+ "VASC": 3.1805154776520794e-06
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+ "mean_confidence": 0.8587908148765564,
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+ "mean_entropy": 0.3944314420223236,
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+ "median_entropy": 0.22745929658412933,
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  "low_confidence_threshold": 0.5,
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+ "low_confidence_rows": 54
60
  },
61
  "confusion_analysis": {
62
  "false_negatives_by_true_class": {
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  "AKIEC": [
64
  {
65
  "true": "AKIEC",
66
+ "predicted": "SCCKA",
67
  "count": 14,
68
  "rate_of_true": 0.22950819672131148
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72
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73
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75
  },
76
  {
77
  "true": "AKIEC",
78
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79
+ "count": 6,
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81
  }
82
  ],
83
  "BCC": [
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  {
85
  "true": "BCC",
86
+ "predicted": "AKIEC",
87
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88
+ "rate_of_true": 0.021825396825396824
89
  },
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  {
91
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92
+ "predicted": "SCCKA",
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95
  },
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  {
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98
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99
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100
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101
  },
102
  {
103
  "true": "BCC",
 
108
  {
109
  "true": "BCC",
110
  "predicted": "BEN_OTH",
111
+ "count": 3,
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+ "rate_of_true": 0.005952380952380952
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+ "predicted": "VASC",
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+ "count": 1,
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+ "rate_of_true": 0.001984126984126984
125
  }
126
  ],
127
  "BEN_OTH": [
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  "true": "BEN_OTH",
130
  "predicted": "BCC",
131
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132
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133
  },
134
  {
135
  "true": "BEN_OTH",
 
154
  {
155
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156
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157
+ "count": 31,
158
+ "rate_of_true": 0.28440366972477066
159
  },
160
  {
161
  "true": "BKL",
 
165
  },
166
  {
167
  "true": "BKL",
168
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169
+ "count": 8,
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+ "rate_of_true": 0.07339449541284404
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  },
172
  {
173
  "true": "BKL",
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+ "predicted": "MEL",
175
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177
  },
178
  {
179
  "true": "BKL",
180
+ "predicted": "NV",
181
+ "count": 6,
182
+ "rate_of_true": 0.05504587155963303
183
  },
184
  {
185
  "true": "BKL",
186
+ "predicted": "BEN_OTH",
187
+ "count": 1,
188
+ "rate_of_true": 0.009174311926605505
189
  }
190
  ],
191
  "DF": [
192
  {
193
  "true": "DF",
194
  "predicted": "BCC",
195
+ "count": 4,
196
+ "rate_of_true": 0.4
197
  },
198
  {
199
  "true": "DF",
 
201
  "count": 1,
202
  "rate_of_true": 0.1
203
  },
 
 
 
 
 
 
204
  {
205
  "true": "DF",
206
  "predicted": "NV",
 
212
  {
213
  "true": "INF",
214
  "predicted": "BCC",
215
+ "count": 5,
216
+ "rate_of_true": 0.5
217
  },
218
  {
219
  "true": "INF",
220
  "predicted": "NV",
221
  "count": 3,
222
  "rate_of_true": 0.3
223
+ },
224
+ {
225
+ "true": "INF",
226
+ "predicted": "BEN_OTH",
227
+ "count": 1,
228
+ "rate_of_true": 0.1
229
  }
230
  ],
231
  "MAL_OTH": [
 
240
  {
241
  "true": "MEL",
242
  "predicted": "NV",
243
+ "count": 25,
244
+ "rate_of_true": 0.2777777777777778
245
  },
246
  {
247
  "true": "MEL",
248
+ "predicted": "BCC",
249
  "count": 9,
250
  "rate_of_true": 0.1
251
  },
252
  {
253
  "true": "MEL",
254
+ "predicted": "BKL",
255
+ "count": 6,
256
+ "rate_of_true": 0.06666666666666667
257
+ },
258
+ {
259
+ "true": "MEL",
260
+ "predicted": "SCCKA",
261
+ "count": 2,
262
+ "rate_of_true": 0.022222222222222223
263
+ },
264
+ {
265
+ "true": "MEL",
266
+ "predicted": "AKIEC",
267
+ "count": 1,
268
+ "rate_of_true": 0.011111111111111112
269
+ },
270
+ {
271
+ "true": "MEL",
272
+ "predicted": "BEN_OTH",
273
+ "count": 1,
274
+ "rate_of_true": 0.011111111111111112
275
  },
276
  {
277
  "true": "MEL",
 
290
  {
291
  "true": "NV",
292
  "predicted": "MEL",
293
+ "count": 13,
294
+ "rate_of_true": 0.087248322147651
295
  },
296
  {
297
  "true": "NV",
298
  "predicted": "BKL",
299
+ "count": 11,
300
+ "rate_of_true": 0.0738255033557047
301
  },
302
  {
303
  "true": "NV",
 
307
  },
308
  {
309
  "true": "NV",
310
+ "predicted": "VASC",
311
  "count": 1,
312
  "rate_of_true": 0.006711409395973154
313
  }
 
316
  {
317
  "true": "SCCKA",
318
  "predicted": "BCC",
319
+ "count": 24,
320
+ "rate_of_true": 0.25263157894736843
321
  },
322
  {
323
  "true": "SCCKA",
324
+ "predicted": "AKIEC",
325
  "count": 8,
326
  "rate_of_true": 0.08421052631578947
327
  },
328
  {
329
  "true": "SCCKA",
330
+ "predicted": "BKL",
331
+ "count": 8,
332
+ "rate_of_true": 0.08421052631578947
333
  }
334
  ],
335
  "VASC": [
 
351
  "AKIEC": [
352
  {
353
  "predicted": "AKIEC",
354
+ "true": "BCC",
355
+ "count": 11,
356
+ "rate_of_predicted": 0.18333333333333332
357
  },
358
  {
359
  "predicted": "AKIEC",
360
+ "true": "BKL",
361
+ "count": 8,
362
+ "rate_of_predicted": 0.13333333333333333
363
  },
364
  {
365
  "predicted": "AKIEC",
366
+ "true": "SCCKA",
367
+ "count": 8,
368
+ "rate_of_predicted": 0.13333333333333333
369
+ },
370
+ {
371
+ "predicted": "AKIEC",
372
+ "true": "MEL",
373
+ "count": 1,
374
+ "rate_of_predicted": 0.016666666666666666
375
  }
376
  ],
377
  "BCC": [
378
  {
379
  "predicted": "BCC",
380
  "true": "BKL",
381
+ "count": 31,
382
+ "rate_of_predicted": 0.055855855855855854
383
  },
384
  {
385
  "predicted": "BCC",
386
  "true": "SCCKA",
387
+ "count": 24,
388
+ "rate_of_predicted": 0.043243243243243246
389
  },
390
  {
391
  "predicted": "BCC",
392
  "true": "AKIEC",
393
+ "count": 9,
394
+ "rate_of_predicted": 0.016216216216216217
395
  },
396
  {
397
  "predicted": "BCC",
398
  "true": "MEL",
399
+ "count": 9,
400
+ "rate_of_predicted": 0.016216216216216217
401
  },
402
  {
403
  "predicted": "BCC",
404
  "true": "INF",
405
+ "count": 5,
406
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407
  },
408
  {
409
  "predicted": "BCC",
410
+ "true": "DF",
411
  "count": 4,
412
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413
  },
414
  {
415
  "predicted": "BCC",
416
  "true": "NV",
417
  "count": 4,
418
+ "rate_of_predicted": 0.007207207207207207
419
  },
420
  {
421
  "predicted": "BCC",
422
+ "true": "BEN_OTH",
423
  "count": 3,
424
+ "rate_of_predicted": 0.005405405405405406
425
  },
426
  {
427
  "predicted": "BCC",
428
  "true": "VASC",
429
  "count": 3,
430
+ "rate_of_predicted": 0.005405405405405406
431
  },
432
  {
433
  "predicted": "BCC",
434
  "true": "MAL_OTH",
435
  "count": 2,
436
+ "rate_of_predicted": 0.0036036036036036037
437
  }
438
  ],
439
  "BEN_OTH": [
440
  {
441
  "predicted": "BEN_OTH",
442
  "true": "BCC",
443
+ "count": 3,
444
+ "rate_of_predicted": 0.375
445
+ },
446
+ {
447
+ "predicted": "BEN_OTH",
448
+ "true": "BKL",
449
+ "count": 1,
450
+ "rate_of_predicted": 0.125
451
+ },
452
+ {
453
+ "predicted": "BEN_OTH",
454
+ "true": "INF",
455
+ "count": 1,
456
+ "rate_of_predicted": 0.125
457
+ },
458
+ {
459
+ "predicted": "BEN_OTH",
460
+ "true": "MEL",
461
+ "count": 1,
462
+ "rate_of_predicted": 0.125
463
  }
464
  ],
465
  "BKL": [
466
  {
467
  "predicted": "BKL",
468
  "true": "NV",
469
+ "count": 11,
470
+ "rate_of_predicted": 0.125
471
  },
472
  {
473
  "predicted": "BKL",
474
+ "true": "BCC",
 
 
 
 
 
 
475
  "count": 9,
476
+ "rate_of_predicted": 0.10227272727272728
477
  },
478
  {
479
  "predicted": "BKL",
480
  "true": "SCCKA",
481
  "count": 8,
482
+ "rate_of_predicted": 0.09090909090909091
483
  },
484
  {
485
  "predicted": "BKL",
486
+ "true": "AKIEC",
487
+ "count": 6,
488
+ "rate_of_predicted": 0.06818181818181818
489
+ },
490
+ {
491
+ "predicted": "BKL",
492
+ "true": "MEL",
493
  "count": 6,
494
+ "rate_of_predicted": 0.06818181818181818
495
  },
496
  {
497
  "predicted": "BKL",
498
  "true": "BEN_OTH",
499
  "count": 2,
500
+ "rate_of_predicted": 0.022727272727272728
501
  },
502
  {
503
  "predicted": "BKL",
504
  "true": "DF",
505
  "count": 1,
506
+ "rate_of_predicted": 0.011363636363636364
 
 
 
 
 
 
 
 
507
  }
508
  ],
509
+ "DF": [],
510
  "INF": [
 
 
 
 
 
 
511
  {
512
  "predicted": "INF",
513
  "true": "MEL",
514
  "count": 1,
515
+ "rate_of_predicted": 0.5
516
  }
517
  ],
518
  "MAL_OTH": [],
 
520
  {
521
  "predicted": "MEL",
522
  "true": "NV",
523
+ "count": 13,
524
+ "rate_of_predicted": 0.18840579710144928
525
  },
526
  {
527
  "predicted": "MEL",
528
+ "true": "BKL",
529
+ "count": 6,
530
+ "rate_of_predicted": 0.08695652173913043
531
  },
532
  {
533
  "predicted": "MEL",
534
+ "true": "BCC",
535
  "count": 5,
536
+ "rate_of_predicted": 0.07246376811594203
537
  },
538
  {
539
  "predicted": "MEL",
540
  "true": "BEN_OTH",
541
  "count": 1,
542
+ "rate_of_predicted": 0.014492753623188406
 
 
 
 
 
 
543
  }
544
  ],
545
  "NV": [
546
  {
547
  "predicted": "NV",
548
  "true": "MEL",
549
+ "count": 25,
550
+ "rate_of_predicted": 0.15527950310559005
551
  },
552
  {
553
  "predicted": "NV",
554
  "true": "BKL",
555
  "count": 6,
556
+ "rate_of_predicted": 0.037267080745341616
557
+ },
558
+ {
559
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560
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561
+ "count": 3,
562
+ "rate_of_predicted": 0.018633540372670808
563
  },
564
  {
565
  "predicted": "NV",
566
  "true": "INF",
567
  "count": 3,
568
+ "rate_of_predicted": 0.018633540372670808
569
  },
570
  {
571
  "predicted": "NV",
572
  "true": "VASC",
573
  "count": 2,
574
+ "rate_of_predicted": 0.012422360248447204
575
  },
576
  {
577
  "predicted": "NV",
578
  "true": "BEN_OTH",
579
  "count": 1,
580
+ "rate_of_predicted": 0.006211180124223602
581
  },
582
  {
583
  "predicted": "NV",
584
  "true": "DF",
585
  "count": 1,
586
+ "rate_of_predicted": 0.006211180124223602
587
  }
588
  ],
589
  "SCCKA": [
590
  {
591
  "predicted": "SCCKA",
592
+ "true": "AKIEC",
593
+ "count": 14,
594
+ "rate_of_predicted": 0.14893617021276595
595
  },
596
  {
597
  "predicted": "SCCKA",
598
+ "true": "BKL",
599
  "count": 12,
600
+ "rate_of_predicted": 0.1276595744680851
601
  },
602
  {
603
  "predicted": "SCCKA",
604
+ "true": "BCC",
605
+ "count": 11,
606
+ "rate_of_predicted": 0.11702127659574468
607
+ },
608
+ {
609
+ "predicted": "SCCKA",
610
+ "true": "MEL",
611
+ "count": 2,
612
+ "rate_of_predicted": 0.02127659574468085
613
  }
614
  ],
615
  "VASC": [
616
+ {
617
+ "predicted": "VASC",
618
+ "true": "BCC",
619
+ "count": 1,
620
+ "rate_of_predicted": 0.14285714285714285
621
+ },
622
  {
623
  "predicted": "VASC",
624
  "true": "MEL",
625
  "count": 1,
626
+ "rate_of_predicted": 0.14285714285714285
627
+ },
628
+ {
629
+ "predicted": "VASC",
630
+ "true": "NV",
631
+ "count": 1,
632
+ "rate_of_predicted": 0.14285714285714285
633
  }
634
  ]
635
  },
 
637
  {
638
  "true": "BKL",
639
  "predicted": "BCC",
640
+ "count": 31,
641
+ "rate_of_true": 0.28440366972477066
 
 
 
 
 
 
642
  },
643
  {
644
  "true": "MEL",
645
  "predicted": "NV",
646
+ "count": 25,
647
+ "rate_of_true": 0.2777777777777778
648
  },
649
  {
650
+ "true": "SCCKA",
651
+ "predicted": "BCC",
652
+ "count": 24,
653
+ "rate_of_true": 0.25263157894736843
654
  },
655
  {
656
  "true": "AKIEC",
657
+ "predicted": "SCCKA",
658
  "count": 14,
659
  "rate_of_true": 0.22950819672131148
660
  },
661
  {
662
  "true": "NV",
663
  "predicted": "MEL",
 
 
 
 
 
 
664
  "count": 13,
665
  "rate_of_true": 0.087248322147651
666
  },
667
  {
668
+ "true": "BKL",
669
  "predicted": "SCCKA",
670
  "count": 12,
671
+ "rate_of_true": 0.11009174311926606
672
  },
673
  {
674
+ "true": "BCC",
675
+ "predicted": "AKIEC",
676
+ "count": 11,
677
+ "rate_of_true": 0.021825396825396824
678
+ },
679
+ {
680
+ "true": "BCC",
681
  "predicted": "SCCKA",
682
+ "count": 11,
683
+ "rate_of_true": 0.021825396825396824
684
  },
685
  {
686
+ "true": "NV",
687
  "predicted": "BKL",
688
+ "count": 11,
689
+ "rate_of_true": 0.0738255033557047
690
  },
691
  {
692
+ "true": "AKIEC",
693
+ "predicted": "BCC",
694
+ "count": 9,
695
+ "rate_of_true": 0.14754098360655737
696
+ },
697
+ {
698
+ "true": "BCC",
699
  "predicted": "BKL",
700
  "count": 9,
701
+ "rate_of_true": 0.017857142857142856
702
  },
703
  {
704
  "true": "MEL",
705
  "predicted": "BCC",
706
+ "count": 9,
707
+ "rate_of_true": 0.1
708
+ },
709
+ {
710
+ "true": "BKL",
711
+ "predicted": "AKIEC",
712
  "count": 8,
713
+ "rate_of_true": 0.07339449541284404
714
  },
715
  {
716
  "true": "SCCKA",
717
+ "predicted": "AKIEC",
718
  "count": 8,
719
  "rate_of_true": 0.08421052631578947
720
  },
721
  {
722
  "true": "SCCKA",
723
+ "predicted": "BKL",
724
+ "count": 8,
725
+ "rate_of_true": 0.08421052631578947
726
  },
727
  {
728
+ "true": "AKIEC",
729
+ "predicted": "BKL",
730
  "count": 6,
731
+ "rate_of_true": 0.09836065573770492
732
  },
733
  {
734
+ "true": "BKL",
735
+ "predicted": "MEL",
736
  "count": 6,
737
+ "rate_of_true": 0.05504587155963303
738
  },
739
  {
740
  "true": "BKL",
 
743
  "rate_of_true": 0.05504587155963303
744
  },
745
  {
746
+ "true": "MEL",
747
+ "predicted": "BKL",
748
  "count": 6,
749
+ "rate_of_true": 0.06666666666666667
750
  },
751
  {
752
  "true": "BCC",
753
  "predicted": "MEL",
754
  "count": 5,
755
  "rate_of_true": 0.00992063492063492
 
 
 
 
 
 
756
  }
757
  ],
758
  "watched_confusion_patterns": [
 
 
 
 
 
 
759
  {
760
  "true": "AKIEC",
761
  "predicted": "SCCKA",
762
+ "count": 14,
763
+ "rate_of_true": 0.22950819672131148
764
  },
765
  {
766
  "true": "BKL",
 
769
  "rate_of_true": 0.11009174311926606
770
  },
771
  {
772
+ "true": "BCC",
773
+ "predicted": "AKIEC",
774
+ "count": 11,
775
+ "rate_of_true": 0.021825396825396824
776
  },
777
  {
778
+ "true": "BCC",
779
+ "predicted": "SCCKA",
780
+ "count": 11,
781
+ "rate_of_true": 0.021825396825396824
782
  },
783
  {
784
  "true": "BCC",
785
+ "predicted": "BKL",
786
+ "count": 9,
787
+ "rate_of_true": 0.017857142857142856
788
+ },
789
+ {
790
+ "true": "SCCKA",
791
  "predicted": "AKIEC",
792
+ "count": 8,
793
+ "rate_of_true": 0.08421052631578947
794
  },
795
  {
796
+ "true": "SCCKA",
797
  "predicted": "BKL",
798
+ "count": 8,
799
+ "rate_of_true": 0.08421052631578947
800
  },
801
  {
802
  "true": "INF",
803
  "predicted": "BCC",
804
+ "count": 5,
805
+ "rate_of_true": 0.5
806
  },
807
  {
808
  "true": "INF",
809
  "predicted": "NV",
810
  "count": 3,
811
  "rate_of_true": 0.3
812
+ },
813
+ {
814
+ "true": "INF",
815
+ "predicted": "BEN_OTH",
816
+ "count": 1,
817
+ "rate_of_true": 0.1
818
  }
819
  ]
820
  }
singleenc_canvas_meta_clean/run_report.md CHANGED
@@ -24,13 +24,13 @@
24
 
25
  ## Final Metrics
26
 
27
- - accuracy: 0.7223282442748091
28
- - balanced_accuracy: 0.41800227494210984
29
- - dice_macro: 0.45890082971867585
30
- - f1_macro: 0.45890082971867585
31
- - roc_auc_macro_ovr: 0.8877698658146211
32
  - top2_accuracy: 0.8826335877862596
33
- - top3_accuracy: 0.9427480916030534
34
 
35
  ## Data Distribution
36
 
@@ -80,80 +80,81 @@
80
 
81
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
82
  | --- | --- | --- | --- | --- | --- | --- | --- |
83
- | AKIEC | 61 | 0.581395 | 0.409836 | 0.981763 | 0.480769 | 0.920225 | 0.72496 |
84
- | BCC | 504 | 0.809359 | 0.926587 | 0.797794 | 0.864015 | 0.934958 | 0.906308 |
85
- | BEN_OTH | 9 | 0.333333 | 0.111111 | 0.998075 | 0.166667 | 0.906962 | 0.596228 |
86
- | BKL | 109 | 0.467391 | 0.394495 | 0.947817 | 0.427861 | 0.837442 | 0.779698 |
87
- | DF | 10 | 0.8 | 0.4 | 0.999037 | 0.533333 | 0.922543 | 0.612932 |
88
- | INF | 10 | 0.25 | 0.1 | 0.99711 | 0.142857 | 0.944412 | 0.685016 |
89
- | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.497132 | |
90
- | MEL | 90 | 0.633803 | 0.5 | 0.97286 | 0.559006 | 0.921213 | 0.7803 |
91
- | NV | 149 | 0.75 | 0.785235 | 0.956618 | 0.767213 | 0.964211 | 0.911588 |
92
- | SCCKA | 95 | 0.543478 | 0.526316 | 0.955929 | 0.534759 | 0.931021 | 0.891758 |
93
- | VASC | 9 | 0.8 | 0.444444 | 0.999038 | 0.571429 | 0.985349 | 0.878434 |
94
 
95
  ## Weak Classes
96
 
97
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
98
  | --- | --- | --- | --- | --- | --- | --- | --- |
99
- | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.497132 | |
100
- | INF | 10 | 0.25 | 0.1 | 0.99711 | 0.142857 | 0.944412 | 0.685016 |
101
- | BEN_OTH | 9 | 0.333333 | 0.111111 | 0.998075 | 0.166667 | 0.906962 | 0.596228 |
102
- | BKL | 109 | 0.467391 | 0.394495 | 0.947817 | 0.427861 | 0.837442 | 0.779698 |
103
- | AKIEC | 61 | 0.581395 | 0.409836 | 0.981763 | 0.480769 | 0.920225 | 0.72496 |
104
 
105
  ## Prediction Distribution
106
 
107
  | class | pred_count | mean_prob |
108
  |---|---:|---:|
109
- | AKIEC | 43 | 0.0522 |
110
- | BCC | 577 | 0.5079 |
111
- | BEN_OTH | 3 | 0.0060 |
112
- | BKL | 92 | 0.1065 |
113
- | DF | 5 | 0.0054 |
114
- | INF | 4 | 0.0040 |
115
- | MAL_OTH | 0 | 0.0005 |
116
- | MEL | 71 | 0.0689 |
117
- | NV | 156 | 0.1476 |
118
- | SCCKA | 92 | 0.0955 |
119
- | VASC | 5 | 0.0055 |
120
-
121
- - mean_confidence: 0.8397572636604309
122
- - median_confidence: 0.931233286857605
123
- - mean_top1_top2_gap: 0.7270599007606506
124
- - mean_entropy: 0.4348164200782776
125
- - low_confidence_rows: 76
126
 
127
  ## Top Confusion Pairs
128
 
129
  | true | predicted | count | rate_of_true |
130
  |---|---|---:|---:|
131
- | BKL | BCC | 36 | 0.330 |
132
- | SCCKA | BCC | 30 | 0.316 |
133
- | MEL | NV | 26 | 0.289 |
134
- | BCC | SCCKA | 18 | 0.036 |
135
- | AKIEC | BCC | 14 | 0.230 |
136
- | NV | MEL | 14 | 0.094 |
137
- | NV | BKL | 13 | 0.087 |
138
- | AKIEC | SCCKA | 12 | 0.197 |
139
  | BKL | SCCKA | 12 | 0.110 |
140
- | AKIEC | BKL | 10 | 0.164 |
141
- | MEL | BKL | 9 | 0.100 |
142
- | MEL | BCC | 8 | 0.089 |
 
 
 
143
 
144
  ## Watched Confusion Patterns
145
 
146
  | true | predicted | count | rate_of_true |
147
  |---|---|---:|---:|
148
- | BCC | SCCKA | 18 | 0.036 |
149
- | AKIEC | SCCKA | 12 | 0.197 |
150
  | BKL | SCCKA | 12 | 0.110 |
 
 
 
 
151
  | SCCKA | BKL | 8 | 0.084 |
152
- | SCCKA | AKIEC | 7 | 0.074 |
153
- | BCC | AKIEC | 6 | 0.012 |
154
- | BCC | BKL | 6 | 0.012 |
155
- | INF | BCC | 6 | 0.600 |
156
  | INF | NV | 3 | 0.300 |
 
157
 
158
  ## Warnings
159
 
 
24
 
25
  ## Final Metrics
26
 
27
+ - accuracy: 0.732824427480916
28
+ - balanced_accuracy: 0.4447262538006909
29
+ - dice_macro: 0.4763148808801912
30
+ - f1_macro: 0.4763148808801912
31
+ - roc_auc_macro_ovr: 0.90824548970492
32
  - top2_accuracy: 0.8826335877862596
33
+ - top3_accuracy: 0.9398854961832062
34
 
35
  ## Data Distribution
36
 
 
80
 
81
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
82
  | --- | --- | --- | --- | --- | --- | --- | --- |
83
+ | AKIEC | 61 | 0.533333 | 0.52459 | 0.971631 | 0.528926 | 0.931569 | 0.751253 |
84
+ | BCC | 504 | 0.830631 | 0.914683 | 0.827206 | 0.870633 | 0.944981 | 0.934259 |
85
+ | BEN_OTH | 9 | 0.25 | 0.222222 | 0.994225 | 0.235294 | 0.914768 | 0.582505 |
86
+ | BKL | 109 | 0.511364 | 0.412844 | 0.954207 | 0.456853 | 0.847554 | 0.823296 |
87
+ | DF | 10 | 1 | 0.4 | 1 | 0.571429 | 0.945087 | 0.632219 |
88
+ | INF | 10 | 0.5 | 0.1 | 0.999037 | 0.166667 | 0.951252 | 0.564142 |
89
+ | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.666826 | |
90
+ | MEL | 90 | 0.637681 | 0.488889 | 0.973904 | 0.553459 | 0.91778 | 0.800263 |
91
+ | NV | 149 | 0.745342 | 0.805369 | 0.954394 | 0.774194 | 0.966667 | 0.924132 |
92
+ | SCCKA | 95 | 0.585106 | 0.578947 | 0.959077 | 0.582011 | 0.928812 | 0.863229 |
93
+ | VASC | 9 | 0.571429 | 0.444444 | 0.997113 | 0.5 | 0.975404 | 0.887765 |
94
 
95
  ## Weak Classes
96
 
97
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
98
  | --- | --- | --- | --- | --- | --- | --- | --- |
99
+ | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.666826 | |
100
+ | INF | 10 | 0.5 | 0.1 | 0.999037 | 0.166667 | 0.951252 | 0.564142 |
101
+ | BEN_OTH | 9 | 0.25 | 0.222222 | 0.994225 | 0.235294 | 0.914768 | 0.582505 |
102
+ | BKL | 109 | 0.511364 | 0.412844 | 0.954207 | 0.456853 | 0.847554 | 0.823296 |
103
+ | VASC | 9 | 0.571429 | 0.444444 | 0.997113 | 0.5 | 0.975404 | 0.887765 |
104
 
105
  ## Prediction Distribution
106
 
107
  | class | pred_count | mean_prob |
108
  |---|---:|---:|
109
+ | AKIEC | 60 | 0.0587 |
110
+ | BCC | 555 | 0.5029 |
111
+ | BEN_OTH | 8 | 0.0075 |
112
+ | BKL | 88 | 0.1009 |
113
+ | DF | 4 | 0.0052 |
114
+ | INF | 2 | 0.0037 |
115
+ | MAL_OTH | 0 | 0.0007 |
116
+ | MEL | 69 | 0.0668 |
117
+ | NV | 161 | 0.1539 |
118
+ | SCCKA | 94 | 0.0935 |
119
+ | VASC | 7 | 0.0063 |
120
+
121
+ - mean_confidence: 0.8587908148765564
122
+ - median_confidence: 0.9537043571472168
123
+ - mean_top1_top2_gap: 0.7610636353492737
124
+ - mean_entropy: 0.3944314420223236
125
+ - low_confidence_rows: 54
126
 
127
  ## Top Confusion Pairs
128
 
129
  | true | predicted | count | rate_of_true |
130
  |---|---|---:|---:|
131
+ | BKL | BCC | 31 | 0.284 |
132
+ | MEL | NV | 25 | 0.278 |
133
+ | SCCKA | BCC | 24 | 0.253 |
134
+ | AKIEC | SCCKA | 14 | 0.230 |
135
+ | NV | MEL | 13 | 0.087 |
 
 
 
136
  | BKL | SCCKA | 12 | 0.110 |
137
+ | BCC | AKIEC | 11 | 0.022 |
138
+ | BCC | SCCKA | 11 | 0.022 |
139
+ | NV | BKL | 11 | 0.074 |
140
+ | AKIEC | BCC | 9 | 0.148 |
141
+ | BCC | BKL | 9 | 0.018 |
142
+ | MEL | BCC | 9 | 0.100 |
143
 
144
  ## Watched Confusion Patterns
145
 
146
  | true | predicted | count | rate_of_true |
147
  |---|---|---:|---:|
148
+ | AKIEC | SCCKA | 14 | 0.230 |
 
149
  | BKL | SCCKA | 12 | 0.110 |
150
+ | BCC | AKIEC | 11 | 0.022 |
151
+ | BCC | SCCKA | 11 | 0.022 |
152
+ | BCC | BKL | 9 | 0.018 |
153
+ | SCCKA | AKIEC | 8 | 0.084 |
154
  | SCCKA | BKL | 8 | 0.084 |
155
+ | INF | BCC | 5 | 0.500 |
 
 
 
156
  | INF | NV | 3 | 0.300 |
157
+ | INF | BEN_OTH | 1 | 0.100 |
158
 
159
  ## Warnings
160
 
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13
- Tail audit DF: predicted_count=5, mean_probability=0.010479, max_probability=0.837968
14
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27
  Saved predictions: /marimo/single_encoder_split_submissions/singleenc_canvas_nometa_clean.csv
 
 
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12
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24
 
25
+ Tail audit DF: predicted_count=5, mean_probability=0.008718, max_probability=0.857767
26
+ Tail audit INF: predicted_count=6, mean_probability=0.012604, max_probability=0.920742
27
  Saved predictions: /marimo/single_encoder_split_submissions/singleenc_canvas_nometa_clean.csv
singleenc_canvas_nometa_clean.train.log CHANGED
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singleenc_canvas_nometa_clean/confusion_matrix.csv CHANGED
@@ -1,12 +1,12 @@
1
  ,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
2
- AKIEC,24,14,0,10,0,0,0,0,0,13,0
3
- BCC,6,461,1,9,0,1,0,4,9,12,1
4
- BEN_OTH,0,4,1,2,0,0,0,1,1,0,0
5
- BKL,1,35,0,47,0,3,0,3,9,11,0
6
- DF,0,4,0,1,3,0,0,0,2,0,0
7
- INF,0,7,1,0,0,1,0,0,1,0,0
8
  MAL_OTH,0,2,0,0,0,0,0,0,0,0,0
9
- MEL,1,8,1,4,1,1,0,27,45,1,1
10
- NV,0,3,1,8,1,0,0,8,125,0,3
11
- SCCKA,7,27,0,5,0,0,0,0,0,56,0
12
- VASC,0,3,0,0,0,0,0,0,2,0,4
 
1
  ,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
2
+ AKIEC,27,12,0,10,1,1,0,0,0,10,0
3
+ BCC,7,462,2,12,0,2,0,4,3,9,3
4
+ BEN_OTH,0,3,2,1,0,0,0,2,1,0,0
5
+ BKL,4,34,0,46,0,1,0,7,7,10,0
6
+ DF,0,4,1,1,3,0,0,0,1,0,0
7
+ INF,0,8,0,0,0,1,0,0,1,0,0
8
  MAL_OTH,0,2,0,0,0,0,0,0,0,0,0
9
+ MEL,1,9,0,5,0,1,0,43,29,1,1
10
+ NV,0,9,2,9,1,0,0,17,109,0,2
11
+ SCCKA,10,22,0,7,0,0,0,0,0,56,0
12
+ VASC,0,1,0,0,0,0,0,0,2,0,6
singleenc_canvas_nometa_clean/confusion_matrix_raw.csv CHANGED
@@ -1,12 +1,12 @@
1
  ,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
2
- AKIEC,24,14,0,10,0,0,0,0,0,13,0
3
- BCC,6,461,1,9,0,1,0,4,9,12,1
4
- BEN_OTH,0,4,1,2,0,0,0,1,1,0,0
5
- BKL,1,35,0,47,0,3,0,3,9,11,0
6
- DF,0,4,0,1,3,0,0,0,2,0,0
7
- INF,0,7,1,0,0,1,0,0,1,0,0
8
  MAL_OTH,0,2,0,0,0,0,0,0,0,0,0
9
- MEL,1,8,1,4,1,1,0,27,45,1,1
10
- NV,0,3,1,8,1,0,0,8,125,0,3
11
- SCCKA,7,27,0,5,0,0,0,0,0,56,0
12
- VASC,0,3,0,0,0,0,0,0,2,0,4
 
1
  ,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
2
+ AKIEC,27,12,0,10,1,1,0,0,0,10,0
3
+ BCC,7,462,2,12,0,2,0,4,3,9,3
4
+ BEN_OTH,0,3,2,1,0,0,0,2,1,0,0
5
+ BKL,4,34,0,46,0,1,0,7,7,10,0
6
+ DF,0,4,1,1,3,0,0,0,1,0,0
7
+ INF,0,8,0,0,0,1,0,0,1,0,0
8
  MAL_OTH,0,2,0,0,0,0,0,0,0,0,0
9
+ MEL,1,9,0,5,0,1,0,43,29,1,1
10
+ NV,0,9,2,9,1,0,0,17,109,0,2
11
+ SCCKA,10,22,0,7,0,0,0,0,0,56,0
12
+ VASC,0,1,0,0,0,0,0,0,2,0,6
singleenc_canvas_nometa_clean/history.csv CHANGED
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singleenc_canvas_nometa_clean/metrics.json CHANGED
@@ -1,7 +1,7 @@
1
  {
2
- "best_selection_metric": 0.42409547167495665,
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  "selection_metric_name": "f1_macro",
4
- "best_val_f1_macro": 0.42409547167495665,
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  "checkpoint_variant": "raw",
6
  "temperature": 1.0,
7
  "variants": {
@@ -9,65 +9,65 @@
9
  "checkpoint": "/marimo/single_encoder_split_runs/singleenc_canvas_nometa_clean/best_raw.pt",
10
  "temperature": 1.0,
11
  "uncalibrated_metrics": {
12
- "accuracy": 0.7146946564885496,
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- "nll": 0.9922605125065681,
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- "precision_macro": 0.478092225818034,
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- "recall_macro": 0.40211574885877677,
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- "roc_auc_macro_ovr": 0.886068327441302,
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- "roc_auc_weighted_ovr": 0.9217927680839992,
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- "roc_auc_micro_ovr": 0.9609580771808169,
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- "specificity_macro": 0.9635357839817963,
31
  "per_class": [
32
  {
33
  "class": "AKIEC",
34
  "support": 61,
35
- "precision": 0.6153846153846154,
36
- "recall_sensitivity": 0.39344262295081966,
37
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39
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40
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41
  },
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  {
43
  "class": "BCC",
44
  "support": 504,
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  },
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  {
53
  "class": "BEN_OTH",
54
  "support": 9,
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- "precision": 0.2,
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  },
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  {
63
  "class": "BKL",
64
  "support": 109,
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- "precision": 0.5465116279069767,
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71
  },
72
  {
73
  "class": "DF",
@@ -76,8 +76,8 @@
76
  "recall_sensitivity": 0.3,
77
  "specificity": 0.9980732177263969,
78
  "f1": 0.4,
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- "auc_ovr": 0.9576107899807322,
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81
  },
82
  {
83
  "class": "INF",
@@ -86,8 +86,8 @@
86
  "recall_sensitivity": 0.1,
87
  "specificity": 0.9951830443159922,
88
  "f1": 0.125,
89
- "auc_ovr": 0.9180154142581889,
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91
  },
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  {
93
  "class": "MAL_OTH",
@@ -96,73 +96,73 @@
96
  "recall_sensitivity": 0.0,
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  "specificity": 1.0,
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  "f1": 0.0,
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  Saved predictions: /marimo/single_encoder_split_submissions/singleenc_pool_meta_clean.csv
singleenc_pool_meta_clean.train.log CHANGED
The diff for this file is too large to render. See raw diff
 
singleenc_pool_meta_clean/confusion_analysis.json CHANGED
@@ -4,44 +4,44 @@
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- "count": 5,
740
- "rate_of_true": 0.05263157894736842
741
  },
742
  {
743
  "true": "BCC",
744
- "predicted": "BKL",
745
- "count": 4,
746
- "rate_of_true": 0.007936507936507936
747
  },
748
  {
749
- "true": "INF",
750
- "predicted": "NV",
751
- "count": 2,
752
- "rate_of_true": 0.2
753
  },
754
  {
755
  "true": "INF",
756
- "predicted": "BEN_OTH",
757
  "count": 1,
758
  "rate_of_true": 0.1
759
  }
 
4
  {
5
  "true": "AKIEC",
6
  "predicted": "BCC",
7
+ "count": 22,
8
+ "rate_of_true": 0.36065573770491804
9
  },
10
  {
11
  "true": "AKIEC",
12
+ "predicted": "BKL",
13
+ "count": 14,
14
+ "rate_of_true": 0.22950819672131148
15
  },
16
  {
17
  "true": "AKIEC",
18
+ "predicted": "SCCKA",
19
+ "count": 12,
20
+ "rate_of_true": 0.19672131147540983
21
  }
22
  ],
23
  "BCC": [
24
  {
25
  "true": "BCC",
26
  "predicted": "SCCKA",
27
+ "count": 28,
28
+ "rate_of_true": 0.05555555555555555
29
  },
30
  {
31
  "true": "BCC",
32
+ "predicted": "BKL",
33
+ "count": 7,
34
+ "rate_of_true": 0.013888888888888888
35
  },
36
  {
37
  "true": "BCC",
38
+ "predicted": "MEL",
39
  "count": 4,
40
  "rate_of_true": 0.007936507936507936
41
  },
42
  {
43
  "true": "BCC",
44
+ "predicted": "AKIEC",
45
  "count": 3,
46
  "rate_of_true": 0.005952380952380952
47
  },
 
53
  },
54
  {
55
  "true": "BCC",
56
+ "predicted": "INF",
57
+ "count": 1,
58
+ "rate_of_true": 0.001984126984126984
59
  },
60
  {
61
  "true": "BCC",
62
+ "predicted": "VASC",
63
  "count": 1,
64
  "rate_of_true": 0.001984126984126984
65
  }
 
94
  {
95
  "true": "BKL",
96
  "predicted": "BCC",
97
+ "count": 39,
98
+ "rate_of_true": 0.3577981651376147
99
  },
100
  {
101
  "true": "BKL",
 
106
  {
107
  "true": "BKL",
108
  "predicted": "MEL",
109
+ "count": 8,
110
+ "rate_of_true": 0.07339449541284404
111
  },
112
  {
113
  "true": "BKL",
114
+ "predicted": "NV",
115
  "count": 6,
116
  "rate_of_true": 0.05504587155963303
117
  },
118
  {
119
  "true": "BKL",
120
+ "predicted": "AKIEC",
121
+ "count": 3,
122
+ "rate_of_true": 0.027522935779816515
 
 
 
 
 
 
123
  },
124
  {
125
  "true": "BKL",
 
132
  {
133
  "true": "DF",
134
  "predicted": "BCC",
135
+ "count": 2,
136
+ "rate_of_true": 0.2
137
  },
138
  {
139
  "true": "DF",
 
144
  {
145
  "true": "DF",
146
  "predicted": "NV",
147
+ "count": 2,
148
+ "rate_of_true": 0.2
149
+ },
150
+ {
151
+ "true": "DF",
152
+ "predicted": "BKL",
153
  "count": 1,
154
  "rate_of_true": 0.1
155
  }
 
158
  {
159
  "true": "INF",
160
  "predicted": "BCC",
161
+ "count": 6,
162
+ "rate_of_true": 0.6
 
 
 
 
 
 
163
  },
164
  {
165
  "true": "INF",
166
+ "predicted": "DF",
167
  "count": 1,
168
  "rate_of_true": 0.1
169
  },
170
  {
171
  "true": "INF",
172
+ "predicted": "MEL",
173
  "count": 1,
174
  "rate_of_true": 0.1
175
  },
176
  {
177
  "true": "INF",
178
+ "predicted": "NV",
179
  "count": 1,
180
  "rate_of_true": 0.1
181
  }
 
198
  {
199
  "true": "MEL",
200
  "predicted": "NV",
201
+ "count": 30,
202
+ "rate_of_true": 0.3333333333333333
203
  },
204
  {
205
  "true": "MEL",
206
+ "predicted": "BKL",
207
  "count": 10,
208
  "rate_of_true": 0.1111111111111111
209
  },
210
  {
211
  "true": "MEL",
212
+ "predicted": "BCC",
213
+ "count": 9,
214
+ "rate_of_true": 0.1
215
  },
216
  {
217
  "true": "MEL",
218
  "predicted": "SCCKA",
219
+ "count": 1,
220
+ "rate_of_true": 0.011111111111111112
221
+ },
222
+ {
223
+ "true": "MEL",
224
+ "predicted": "VASC",
225
+ "count": 1,
226
+ "rate_of_true": 0.011111111111111112
227
  }
228
  ],
229
  "NV": [
230
  {
231
  "true": "NV",
232
+ "predicted": "BKL",
233
+ "count": 10,
234
+ "rate_of_true": 0.06711409395973154
 
 
 
 
 
 
235
  },
236
  {
237
  "true": "NV",
238
+ "predicted": "MEL",
239
  "count": 8,
240
  "rate_of_true": 0.053691275167785234
241
  },
242
  {
243
  "true": "NV",
244
+ "predicted": "BCC",
245
+ "count": 6,
246
+ "rate_of_true": 0.040268456375838924
247
  }
248
  ],
249
  "SCCKA": [
250
  {
251
  "true": "SCCKA",
252
  "predicted": "BCC",
253
+ "count": 26,
254
+ "rate_of_true": 0.2736842105263158
255
  },
256
  {
257
  "true": "SCCKA",
258
+ "predicted": "BKL",
259
+ "count": 8,
260
+ "rate_of_true": 0.08421052631578947
261
  },
262
  {
263
  "true": "SCCKA",
264
+ "predicted": "AKIEC",
265
+ "count": 3,
266
+ "rate_of_true": 0.031578947368421054
267
  }
268
  ],
269
  "VASC": [
270
  {
271
  "true": "VASC",
272
  "predicted": "BCC",
273
+ "count": 1,
274
+ "rate_of_true": 0.1111111111111111
275
  },
276
  {
277
  "true": "VASC",
 
286
  {
287
  "predicted": "AKIEC",
288
  "true": "BCC",
289
+ "count": 3,
290
+ "rate_of_predicted": 0.13636363636363635
291
  },
292
  {
293
  "predicted": "AKIEC",
294
  "true": "BKL",
295
+ "count": 3,
296
+ "rate_of_predicted": 0.13636363636363635
297
  },
298
  {
299
  "predicted": "AKIEC",
300
  "true": "SCCKA",
301
+ "count": 3,
302
+ "rate_of_predicted": 0.13636363636363635
 
 
 
 
 
 
303
  }
304
  ],
305
  "BCC": [
306
  {
307
  "predicted": "BCC",
308
  "true": "BKL",
309
+ "count": 39,
310
+ "rate_of_predicted": 0.06818181818181818
311
  },
312
  {
313
  "predicted": "BCC",
314
  "true": "SCCKA",
315
+ "count": 26,
316
+ "rate_of_predicted": 0.045454545454545456
317
  },
318
  {
319
  "predicted": "BCC",
320
  "true": "AKIEC",
321
+ "count": 22,
322
+ "rate_of_predicted": 0.038461538461538464
323
  },
324
  {
325
  "predicted": "BCC",
326
  "true": "MEL",
 
 
 
 
 
 
327
  "count": 9,
328
+ "rate_of_predicted": 0.015734265734265736
329
  },
330
  {
331
  "predicted": "BCC",
332
  "true": "INF",
333
+ "count": 6,
334
+ "rate_of_predicted": 0.01048951048951049
335
  },
336
  {
337
  "predicted": "BCC",
338
+ "true": "NV",
339
+ "count": 6,
340
+ "rate_of_predicted": 0.01048951048951049
341
  },
342
  {
343
  "predicted": "BCC",
344
  "true": "BEN_OTH",
345
  "count": 3,
346
+ "rate_of_predicted": 0.005244755244755245
347
  },
348
  {
349
  "predicted": "BCC",
350
+ "true": "DF",
351
  "count": 2,
352
+ "rate_of_predicted": 0.0034965034965034965
353
  },
354
  {
355
  "predicted": "BCC",
356
  "true": "MAL_OTH",
357
  "count": 1,
358
+ "rate_of_predicted": 0.0017482517482517483
359
+ },
 
 
360
  {
361
+ "predicted": "BCC",
362
+ "true": "VASC",
363
  "count": 1,
364
+ "rate_of_predicted": 0.0017482517482517483
365
  }
366
  ],
367
+ "BEN_OTH": [],
368
  "BKL": [
369
  {
370
  "predicted": "BKL",
371
  "true": "AKIEC",
372
+ "count": 14,
373
+ "rate_of_predicted": 0.15217391304347827
374
  },
375
  {
376
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377
+ "true": "MEL",
378
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379
+ "rate_of_predicted": 0.10869565217391304
380
  },
381
  {
382
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383
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384
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385
+ "rate_of_predicted": 0.10869565217391304
386
  },
387
  {
388
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389
  "true": "SCCKA",
390
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391
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392
  },
393
  {
394
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395
  "true": "BCC",
396
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397
+ "rate_of_predicted": 0.07608695652173914
398
  },
399
  {
400
  "predicted": "BKL",
401
  "true": "BEN_OTH",
402
  "count": 1,
403
+ "rate_of_predicted": 0.010869565217391304
 
 
 
 
 
 
 
 
404
  },
405
  {
406
+ "predicted": "BKL",
407
+ "true": "DF",
408
  "count": 1,
409
+ "rate_of_predicted": 0.010869565217391304
410
+ }
411
+ ],
412
+ "DF": [
413
  {
414
  "predicted": "DF",
415
+ "true": "INF",
416
  "count": 1,
417
+ "rate_of_predicted": 0.25
418
  }
419
  ],
420
  "INF": [
421
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422
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423
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424
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425
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426
+ },
427
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428
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429
  "true": "BKL",
430
  "count": 1,
431
+ "rate_of_predicted": 0.3333333333333333
432
  }
433
  ],
434
  "MAL_OTH": [],
435
  "MEL": [
436
  {
437
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438
+ "true": "BKL",
439
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440
+ "rate_of_predicted": 0.12698412698412698
441
  },
442
  {
443
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444
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445
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446
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447
  },
448
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449
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450
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451
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452
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453
  },
454
  {
455
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456
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457
  "count": 2,
458
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459
  },
460
  {
461
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462
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463
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464
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465
+ },
466
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467
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468
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469
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470
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471
  }
472
  ],
473
  "NV": [
474
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475
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476
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477
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478
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479
  },
480
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481
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482
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483
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484
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485
  },
486
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487
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488
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489
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490
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491
  },
492
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493
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494
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495
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496
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497
  },
498
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499
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500
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501
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502
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503
  },
504
  {
505
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506
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507
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508
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509
  },
510
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511
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512
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513
  "count": 1,
514
+ "rate_of_predicted": 0.005847953216374269
515
  }
516
  ],
517
  "SCCKA": [
518
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519
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520
  "true": "BCC",
521
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522
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523
  },
524
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525
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526
  "true": "AKIEC",
527
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528
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529
  },
530
  {
531
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532
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533
  "count": 11,
534
+ "rate_of_predicted": 0.0990990990990991
535
  },
536
  {
537
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538
+ "true": "MAL_OTH",
539
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540
+ "rate_of_predicted": 0.009009009009009009
541
  },
542
  {
543
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544
+ "true": "MEL",
545
  "count": 1,
546
+ "rate_of_predicted": 0.009009009009009009
547
  }
548
  ],
549
  "VASC": [
550
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551
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552
  "true": "BCC",
553
+ "count": 1,
554
+ "rate_of_predicted": 0.1111111111111111
555
  },
556
  {
557
  "predicted": "VASC",
558
+ "true": "MEL",
559
  "count": 1,
560
  "rate_of_predicted": 0.1111111111111111
561
  }
 
565
  {
566
  "true": "BKL",
567
  "predicted": "BCC",
568
+ "count": 39,
569
+ "rate_of_true": 0.3577981651376147
 
 
 
 
 
 
570
  },
571
  {
572
  "true": "MEL",
573
  "predicted": "NV",
574
+ "count": 30,
575
+ "rate_of_true": 0.3333333333333333
576
  },
577
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578
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579
  "predicted": "SCCKA",
580
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581
+ "rate_of_true": 0.05555555555555555
582
  },
583
  {
584
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585
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586
+ "count": 26,
587
+ "rate_of_true": 0.2736842105263158
588
  },
589
  {
590
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591
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592
+ "count": 22,
593
+ "rate_of_true": 0.36065573770491804
594
  },
595
  {
596
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597
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598
+ "count": 14,
599
+ "rate_of_true": 0.22950819672131148
600
  },
601
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602
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603
+ "predicted": "SCCKA",
604
+ "count": 12,
605
+ "rate_of_true": 0.19672131147540983
606
  },
607
  {
608
  "true": "BKL",
 
612
  },
613
  {
614
  "true": "MEL",
615
+ "predicted": "BKL",
616
  "count": 10,
617
  "rate_of_true": 0.1111111111111111
618
  },
619
  {
620
+ "true": "NV",
621
  "predicted": "BKL",
622
+ "count": 10,
623
+ "rate_of_true": 0.06711409395973154
624
  },
625
  {
626
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627
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628
  "count": 9,
629
+ "rate_of_true": 0.1
630
+ },
631
+ {
632
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633
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634
+ "count": 8,
635
+ "rate_of_true": 0.07339449541284404
636
  },
637
  {
638
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639
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640
  "count": 8,
641
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642
  },
643
  {
644
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645
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646
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647
+ "rate_of_true": 0.08421052631578947
648
+ },
649
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650
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651
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652
  "count": 7,
653
+ "rate_of_true": 0.013888888888888888
654
  },
655
  {
656
  "true": "BKL",
657
+ "predicted": "NV",
658
  "count": 6,
659
  "rate_of_true": 0.05504587155963303
660
  },
 
 
 
 
 
 
661
  {
662
  "true": "INF",
663
  "predicted": "BCC",
664
+ "count": 6,
665
+ "rate_of_true": 0.6
 
 
 
 
 
 
666
  },
667
  {
668
+ "true": "NV",
669
+ "predicted": "BCC",
670
+ "count": 6,
671
+ "rate_of_true": 0.040268456375838924
672
  },
673
  {
674
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675
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676
  "count": 4,
677
  "rate_of_true": 0.007936507936507936
678
+ },
679
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680
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681
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682
+ "count": 3,
683
+ "rate_of_true": 0.005952380952380952
684
  }
685
  ],
686
  "watched_confusion_patterns": [
687
  {
688
  "true": "BCC",
689
  "predicted": "SCCKA",
690
+ "count": 28,
691
+ "rate_of_true": 0.05555555555555555
692
  },
693
  {
694
  "true": "AKIEC",
695
  "predicted": "SCCKA",
696
+ "count": 12,
697
+ "rate_of_true": 0.19672131147540983
 
 
 
 
 
 
698
  },
699
  {
700
  "true": "BKL",
 
704
  },
705
  {
706
  "true": "SCCKA",
707
+ "predicted": "BKL",
708
+ "count": 8,
709
+ "rate_of_true": 0.08421052631578947
710
  },
711
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712
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713
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714
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715
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716
  },
717
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718
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719
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720
+ "count": 6,
721
+ "rate_of_true": 0.6
722
  },
723
  {
724
  "true": "BCC",
725
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726
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727
+ "rate_of_true": 0.005952380952380952
728
  },
729
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730
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731
+ "predicted": "AKIEC",
732
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singleenc_pool_meta_clean/raw/val_predictions.csv CHANGED
The diff for this file is too large to render. See raw diff
 
singleenc_pool_meta_clean/run_config.json CHANGED
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@@ -210,6 +204,12 @@
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480
  "true": "BEN_OTH",
481
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482
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483
- }
484
- ],
485
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486
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487
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488
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489
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490
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491
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492
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493
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494
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495
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497
- },
 
 
498
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499
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500
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501
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502
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503
  }
504
  ],
505
  "INF": [
 
 
 
 
 
 
506
  {
507
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508
  "true": "BKL",
509
  "count": 1,
510
- "rate_of_predicted": 1.0
511
  }
512
  ],
513
  "MAL_OTH": [],
514
  "MEL": [
515
  {
516
  "predicted": "MEL",
517
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518
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520
  },
521
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522
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523
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524
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526
  },
527
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528
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529
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530
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532
  },
533
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534
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535
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536
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538
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539
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540
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541
  "true": "BEN_OTH",
542
  "count": 1,
543
- "rate_of_predicted": 0.014285714285714285
 
 
 
 
 
 
544
  }
545
  ],
546
  "NV": [
547
  {
548
  "predicted": "NV",
549
  "true": "MEL",
550
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553
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554
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555
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556
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  },
559
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560
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561
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562
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563
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  },
565
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566
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567
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570
  },
571
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572
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573
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574
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575
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576
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577
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578
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579
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580
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581
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582
  },
583
  {
584
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585
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586
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588
  }
589
  ],
590
  "SCCKA": [
591
  {
592
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593
  "true": "BCC",
594
- "count": 20,
595
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596
  },
597
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598
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599
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600
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602
  },
603
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604
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605
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606
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607
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608
  },
609
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610
  "predicted": "SCCKA",
611
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612
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613
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614
  },
615
  {
616
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617
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618
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619
- "rate_of_predicted": 0.010101010101010102
620
  }
621
  ],
622
  "VASC": [
623
  {
624
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625
  "true": "BCC",
626
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627
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628
  },
629
  {
630
  "predicted": "VASC",
631
- "true": "INF",
632
  "count": 1,
633
  "rate_of_predicted": 0.1111111111111111
634
  }
@@ -638,50 +625,44 @@
638
  {
639
  "true": "BKL",
640
  "predicted": "BCC",
641
- "count": 43,
642
- "rate_of_true": 0.3944954128440367
643
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644
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645
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646
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647
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648
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649
  },
650
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651
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652
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653
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654
- "rate_of_true": 0.3111111111111111
655
  },
656
  {
657
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658
  "predicted": "SCCKA",
659
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660
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661
  },
662
  {
663
- "true": "AKIEC",
664
  "predicted": "BCC",
665
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666
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667
  },
668
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669
- "true": "NV",
670
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671
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672
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673
  },
674
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675
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676
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677
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678
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679
  },
680
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681
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682
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683
- "count": 11,
684
- "rate_of_true": 0.021825396825396824
685
  },
686
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687
  "true": "BKL",
@@ -691,89 +672,89 @@
691
  },
692
  {
693
  "true": "MEL",
694
- "predicted": "BCC",
695
  "count": 10,
696
  "rate_of_true": 0.1111111111111111
697
  },
698
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699
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700
  "predicted": "BKL",
701
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702
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703
  },
704
  {
705
- "true": "NV",
706
  "predicted": "BCC",
707
  "count": 9,
708
- "rate_of_true": 0.06040268456375839
 
 
 
 
 
 
709
  },
710
  {
711
  "true": "NV",
712
- "predicted": "BKL",
713
  "count": 8,
714
  "rate_of_true": 0.053691275167785234
715
  },
716
  {
717
- "true": "BKL",
718
- "predicted": "MEL",
 
 
 
 
 
 
719
  "count": 7,
720
- "rate_of_true": 0.06422018348623854
721
  },
722
  {
723
  "true": "BKL",
724
- "predicted": "AKIEC",
725
  "count": 6,
726
  "rate_of_true": 0.05504587155963303
727
  },
728
- {
729
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730
- "predicted": "AKIEC",
731
- "count": 6,
732
- "rate_of_true": 0.06315789473684211
733
- },
734
  {
735
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736
  "predicted": "BCC",
737
- "count": 5,
738
- "rate_of_true": 0.5
739
- },
740
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741
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742
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743
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744
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745
  },
746
  {
747
- "true": "SCCKA",
748
- "predicted": "BKL",
749
- "count": 5,
750
- "rate_of_true": 0.05263157894736842
751
  },
752
  {
753
  "true": "BCC",
754
- "predicted": "BKL",
755
  "count": 4,
756
  "rate_of_true": 0.007936507936507936
 
 
 
 
 
 
757
  }
758
  ],
759
  "watched_confusion_patterns": [
760
  {
761
  "true": "BCC",
762
  "predicted": "SCCKA",
763
- "count": 20,
764
- "rate_of_true": 0.03968253968253968
765
  },
766
  {
767
  "true": "AKIEC",
768
  "predicted": "SCCKA",
769
- "count": 11,
770
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771
- },
772
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773
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774
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775
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776
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777
  },
778
  {
779
  "true": "BKL",
@@ -783,37 +764,37 @@
783
  },
784
  {
785
  "true": "SCCKA",
786
- "predicted": "AKIEC",
787
- "count": 6,
788
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789
  },
790
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791
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792
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793
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794
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795
  },
796
  {
797
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798
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799
- "count": 5,
800
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801
  },
802
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803
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804
- "predicted": "BKL",
805
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806
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807
  },
808
  {
809
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810
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811
- "count": 2,
812
- "rate_of_true": 0.2
813
  },
814
  {
815
  "true": "INF",
816
- "predicted": "BEN_OTH",
817
  "count": 1,
818
  "rate_of_true": 0.1
819
  }
 
11
  "prediction_summary": {
12
  "rows": 1048,
13
  "predicted_class_counts": {
14
+ "AKIEC": 22,
15
+ "BCC": 572,
16
+ "BEN_OTH": 1,
17
+ "BKL": 92,
18
+ "DF": 4,
19
+ "INF": 3,
20
  "MAL_OTH": 0,
21
+ "MEL": 63,
22
+ "NV": 171,
23
+ "SCCKA": 111,
24
  "VASC": 9
25
  },
26
  "mean_probability": {
27
+ "AKIEC": 0.042556971311569214,
28
+ "BCC": 0.48309656977653503,
29
+ "BEN_OTH": 0.005107966251671314,
30
+ "BKL": 0.1090036928653717,
31
+ "DF": 0.006336711347103119,
32
+ "INF": 0.009537066332995892,
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+ "MAL_OTH": 0.0014888482401147485,
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35
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36
+ "SCCKA": 0.10809851437807083,
37
+ "VASC": 0.010129335336387157
38
  },
39
  "median_probability": {
40
+ "AKIEC": 0.006334747653454542,
41
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42
+ "BEN_OTH": 0.0007871725829318166,
43
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44
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45
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48
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49
+ "SCCKA": 0.007299283519387245,
50
+ "VASC": 0.0005547754699364305
51
  },
52
+ "mean_confidence": 0.7764731645584106,
53
+ "median_confidence": 0.8540850877761841,
54
+ "mean_top1_top2_gap": 0.6493982076644897,
55
+ "median_top1_top2_gap": 0.7702277898788452,
56
+ "mean_entropy": 0.6740277409553528,
57
+ "median_entropy": 0.5811111330986023,
58
  "low_confidence_threshold": 0.5,
59
+ "low_confidence_rows": 152
60
  },
61
  "confusion_analysis": {
62
  "false_negatives_by_true_class": {
 
64
  {
65
  "true": "AKIEC",
66
  "predicted": "BCC",
67
+ "count": 22,
68
+ "rate_of_true": 0.36065573770491804
69
  },
70
  {
71
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72
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73
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74
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75
  },
76
  {
77
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78
+ "predicted": "SCCKA",
79
+ "count": 12,
80
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81
  }
82
  ],
83
  "BCC": [
84
  {
85
  "true": "BCC",
86
  "predicted": "SCCKA",
87
+ "count": 28,
88
+ "rate_of_true": 0.05555555555555555
89
  },
90
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91
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92
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93
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94
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95
  },
96
  {
97
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98
+ "predicted": "MEL",
99
  "count": 4,
100
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101
  },
102
  {
103
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104
+ "predicted": "AKIEC",
105
  "count": 3,
106
  "rate_of_true": 0.005952380952380952
107
  },
 
113
  },
114
  {
115
  "true": "BCC",
116
+ "predicted": "INF",
117
+ "count": 1,
118
+ "rate_of_true": 0.001984126984126984
119
  },
120
  {
121
  "true": "BCC",
122
+ "predicted": "VASC",
123
  "count": 1,
124
  "rate_of_true": 0.001984126984126984
125
  }
 
154
  {
155
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156
  "predicted": "BCC",
157
+ "count": 39,
158
+ "rate_of_true": 0.3577981651376147
159
  },
160
  {
161
  "true": "BKL",
 
166
  {
167
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168
  "predicted": "MEL",
169
+ "count": 8,
170
+ "rate_of_true": 0.07339449541284404
171
  },
172
  {
173
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174
+ "predicted": "NV",
175
  "count": 6,
176
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177
  },
178
  {
179
  "true": "BKL",
180
+ "predicted": "AKIEC",
181
+ "count": 3,
182
+ "rate_of_true": 0.027522935779816515
 
 
 
 
 
 
183
  },
184
  {
185
  "true": "BKL",
 
192
  {
193
  "true": "DF",
194
  "predicted": "BCC",
195
+ "count": 2,
196
+ "rate_of_true": 0.2
197
  },
198
  {
199
  "true": "DF",
 
204
  {
205
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206
  "predicted": "NV",
207
+ "count": 2,
208
+ "rate_of_true": 0.2
209
+ },
210
+ {
211
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212
+ "predicted": "BKL",
213
  "count": 1,
214
  "rate_of_true": 0.1
215
  }
 
218
  {
219
  "true": "INF",
220
  "predicted": "BCC",
221
+ "count": 6,
222
+ "rate_of_true": 0.6
 
 
 
 
 
 
223
  },
224
  {
225
  "true": "INF",
226
+ "predicted": "DF",
227
  "count": 1,
228
  "rate_of_true": 0.1
229
  },
230
  {
231
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232
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233
  "count": 1,
234
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235
  },
236
  {
237
  "true": "INF",
238
+ "predicted": "NV",
239
  "count": 1,
240
  "rate_of_true": 0.1
241
  }
 
258
  {
259
  "true": "MEL",
260
  "predicted": "NV",
261
+ "count": 30,
262
+ "rate_of_true": 0.3333333333333333
263
  },
264
  {
265
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266
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267
  "count": 10,
268
  "rate_of_true": 0.1111111111111111
269
  },
270
  {
271
  "true": "MEL",
272
+ "predicted": "BCC",
273
+ "count": 9,
274
+ "rate_of_true": 0.1
275
  },
276
  {
277
  "true": "MEL",
278
  "predicted": "SCCKA",
279
+ "count": 1,
280
+ "rate_of_true": 0.011111111111111112
281
+ },
282
+ {
283
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284
+ "predicted": "VASC",
285
+ "count": 1,
286
+ "rate_of_true": 0.011111111111111112
287
  }
288
  ],
289
  "NV": [
290
  {
291
  "true": "NV",
292
+ "predicted": "BKL",
293
+ "count": 10,
294
+ "rate_of_true": 0.06711409395973154
 
 
 
 
 
 
295
  },
296
  {
297
  "true": "NV",
298
+ "predicted": "MEL",
299
  "count": 8,
300
  "rate_of_true": 0.053691275167785234
301
  },
302
  {
303
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304
+ "predicted": "BCC",
305
+ "count": 6,
306
+ "rate_of_true": 0.040268456375838924
307
  }
308
  ],
309
  "SCCKA": [
310
  {
311
  "true": "SCCKA",
312
  "predicted": "BCC",
313
+ "count": 26,
314
+ "rate_of_true": 0.2736842105263158
315
  },
316
  {
317
  "true": "SCCKA",
318
+ "predicted": "BKL",
319
+ "count": 8,
320
+ "rate_of_true": 0.08421052631578947
321
  },
322
  {
323
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324
+ "predicted": "AKIEC",
325
+ "count": 3,
326
+ "rate_of_true": 0.031578947368421054
327
  }
328
  ],
329
  "VASC": [
330
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331
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332
  "predicted": "BCC",
333
+ "count": 1,
334
+ "rate_of_true": 0.1111111111111111
335
  },
336
  {
337
  "true": "VASC",
 
346
  {
347
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348
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349
+ "count": 3,
350
+ "rate_of_predicted": 0.13636363636363635
351
  },
352
  {
353
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354
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355
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356
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357
  },
358
  {
359
  "predicted": "AKIEC",
360
  "true": "SCCKA",
361
+ "count": 3,
362
+ "rate_of_predicted": 0.13636363636363635
 
 
 
 
 
 
363
  }
364
  ],
365
  "BCC": [
366
  {
367
  "predicted": "BCC",
368
  "true": "BKL",
369
+ "count": 39,
370
+ "rate_of_predicted": 0.06818181818181818
371
  },
372
  {
373
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374
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375
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376
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377
  },
378
  {
379
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380
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381
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382
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383
  },
384
  {
385
  "predicted": "BCC",
386
  "true": "MEL",
 
 
 
 
 
 
387
  "count": 9,
388
+ "rate_of_predicted": 0.015734265734265736
389
  },
390
  {
391
  "predicted": "BCC",
392
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393
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395
  },
396
  {
397
  "predicted": "BCC",
398
+ "true": "NV",
399
+ "count": 6,
400
+ "rate_of_predicted": 0.01048951048951049
401
  },
402
  {
403
  "predicted": "BCC",
404
  "true": "BEN_OTH",
405
  "count": 3,
406
+ "rate_of_predicted": 0.005244755244755245
407
  },
408
  {
409
  "predicted": "BCC",
410
+ "true": "DF",
411
  "count": 2,
412
+ "rate_of_predicted": 0.0034965034965034965
413
  },
414
  {
415
  "predicted": "BCC",
416
  "true": "MAL_OTH",
417
  "count": 1,
418
+ "rate_of_predicted": 0.0017482517482517483
419
+ },
 
 
420
  {
421
+ "predicted": "BCC",
422
+ "true": "VASC",
423
  "count": 1,
424
+ "rate_of_predicted": 0.0017482517482517483
425
  }
426
  ],
427
+ "BEN_OTH": [],
428
  "BKL": [
429
  {
430
  "predicted": "BKL",
431
  "true": "AKIEC",
432
+ "count": 14,
433
+ "rate_of_predicted": 0.15217391304347827
434
  },
435
  {
436
  "predicted": "BKL",
437
+ "true": "MEL",
438
+ "count": 10,
439
+ "rate_of_predicted": 0.10869565217391304
440
  },
441
  {
442
  "predicted": "BKL",
443
+ "true": "NV",
444
+ "count": 10,
445
+ "rate_of_predicted": 0.10869565217391304
446
  },
447
  {
448
  "predicted": "BKL",
449
  "true": "SCCKA",
450
+ "count": 8,
451
+ "rate_of_predicted": 0.08695652173913043
452
  },
453
  {
454
  "predicted": "BKL",
455
  "true": "BCC",
456
+ "count": 7,
457
+ "rate_of_predicted": 0.07608695652173914
458
  },
459
  {
460
  "predicted": "BKL",
461
  "true": "BEN_OTH",
462
  "count": 1,
463
+ "rate_of_predicted": 0.010869565217391304
 
 
 
 
 
 
 
 
464
  },
465
  {
466
+ "predicted": "BKL",
467
+ "true": "DF",
468
  "count": 1,
469
+ "rate_of_predicted": 0.010869565217391304
470
+ }
471
+ ],
472
+ "DF": [
473
  {
474
  "predicted": "DF",
475
+ "true": "INF",
476
  "count": 1,
477
+ "rate_of_predicted": 0.25
478
  }
479
  ],
480
  "INF": [
481
+ {
482
+ "predicted": "INF",
483
+ "true": "BCC",
484
+ "count": 1,
485
+ "rate_of_predicted": 0.3333333333333333
486
+ },
487
  {
488
  "predicted": "INF",
489
  "true": "BKL",
490
  "count": 1,
491
+ "rate_of_predicted": 0.3333333333333333
492
  }
493
  ],
494
  "MAL_OTH": [],
495
  "MEL": [
496
  {
497
  "predicted": "MEL",
498
+ "true": "BKL",
499
+ "count": 8,
500
+ "rate_of_predicted": 0.12698412698412698
501
  },
502
  {
503
  "predicted": "MEL",
504
+ "true": "NV",
505
+ "count": 8,
506
+ "rate_of_predicted": 0.12698412698412698
507
  },
508
  {
509
  "predicted": "MEL",
510
  "true": "BCC",
511
+ "count": 4,
512
+ "rate_of_predicted": 0.06349206349206349
513
  },
514
  {
515
  "predicted": "MEL",
516
  "true": "DF",
517
  "count": 2,
518
+ "rate_of_predicted": 0.031746031746031744
519
  },
520
  {
521
  "predicted": "MEL",
522
  "true": "BEN_OTH",
523
  "count": 1,
524
+ "rate_of_predicted": 0.015873015873015872
525
+ },
526
+ {
527
+ "predicted": "MEL",
528
+ "true": "INF",
529
+ "count": 1,
530
+ "rate_of_predicted": 0.015873015873015872
531
  }
532
  ],
533
  "NV": [
534
  {
535
  "predicted": "NV",
536
  "true": "MEL",
537
+ "count": 30,
538
+ "rate_of_predicted": 0.17543859649122806
539
  },
540
  {
541
  "predicted": "NV",
542
  "true": "BKL",
543
+ "count": 6,
544
+ "rate_of_predicted": 0.03508771929824561
545
  },
546
  {
547
  "predicted": "NV",
548
  "true": "BCC",
549
  "count": 3,
550
+ "rate_of_predicted": 0.017543859649122806
551
  },
552
  {
553
  "predicted": "NV",
554
  "true": "BEN_OTH",
555
  "count": 3,
556
+ "rate_of_predicted": 0.017543859649122806
557
  },
558
  {
559
  "predicted": "NV",
560
+ "true": "DF",
561
  "count": 2,
562
+ "rate_of_predicted": 0.011695906432748537
563
  },
564
  {
565
  "predicted": "NV",
566
+ "true": "INF",
567
  "count": 1,
568
+ "rate_of_predicted": 0.005847953216374269
569
  },
570
  {
571
  "predicted": "NV",
572
  "true": "VASC",
573
  "count": 1,
574
+ "rate_of_predicted": 0.005847953216374269
575
  }
576
  ],
577
  "SCCKA": [
578
  {
579
  "predicted": "SCCKA",
580
  "true": "BCC",
581
+ "count": 28,
582
+ "rate_of_predicted": 0.25225225225225223
583
  },
584
  {
585
  "predicted": "SCCKA",
586
  "true": "AKIEC",
587
+ "count": 12,
588
+ "rate_of_predicted": 0.10810810810810811
589
  },
590
  {
591
  "predicted": "SCCKA",
592
  "true": "BKL",
593
  "count": 11,
594
+ "rate_of_predicted": 0.0990990990990991
595
  },
596
  {
597
  "predicted": "SCCKA",
598
+ "true": "MAL_OTH",
599
+ "count": 1,
600
+ "rate_of_predicted": 0.009009009009009009
601
  },
602
  {
603
  "predicted": "SCCKA",
604
+ "true": "MEL",
605
  "count": 1,
606
+ "rate_of_predicted": 0.009009009009009009
607
  }
608
  ],
609
  "VASC": [
610
  {
611
  "predicted": "VASC",
612
  "true": "BCC",
613
+ "count": 1,
614
+ "rate_of_predicted": 0.1111111111111111
615
  },
616
  {
617
  "predicted": "VASC",
618
+ "true": "MEL",
619
  "count": 1,
620
  "rate_of_predicted": 0.1111111111111111
621
  }
 
625
  {
626
  "true": "BKL",
627
  "predicted": "BCC",
628
+ "count": 39,
629
+ "rate_of_true": 0.3577981651376147
 
 
 
 
 
 
630
  },
631
  {
632
  "true": "MEL",
633
  "predicted": "NV",
634
+ "count": 30,
635
+ "rate_of_true": 0.3333333333333333
636
  },
637
  {
638
  "true": "BCC",
639
  "predicted": "SCCKA",
640
+ "count": 28,
641
+ "rate_of_true": 0.05555555555555555
642
  },
643
  {
644
+ "true": "SCCKA",
645
  "predicted": "BCC",
646
+ "count": 26,
647
+ "rate_of_true": 0.2736842105263158
648
  },
649
  {
650
+ "true": "AKIEC",
651
+ "predicted": "BCC",
652
+ "count": 22,
653
+ "rate_of_true": 0.36065573770491804
654
  },
655
  {
656
  "true": "AKIEC",
657
+ "predicted": "BKL",
658
+ "count": 14,
659
+ "rate_of_true": 0.22950819672131148
660
  },
661
  {
662
+ "true": "AKIEC",
663
+ "predicted": "SCCKA",
664
+ "count": 12,
665
+ "rate_of_true": 0.19672131147540983
666
  },
667
  {
668
  "true": "BKL",
 
672
  },
673
  {
674
  "true": "MEL",
675
+ "predicted": "BKL",
676
  "count": 10,
677
  "rate_of_true": 0.1111111111111111
678
  },
679
  {
680
+ "true": "NV",
681
  "predicted": "BKL",
682
+ "count": 10,
683
+ "rate_of_true": 0.06711409395973154
684
  },
685
  {
686
+ "true": "MEL",
687
  "predicted": "BCC",
688
  "count": 9,
689
+ "rate_of_true": 0.1
690
+ },
691
+ {
692
+ "true": "BKL",
693
+ "predicted": "MEL",
694
+ "count": 8,
695
+ "rate_of_true": 0.07339449541284404
696
  },
697
  {
698
  "true": "NV",
699
+ "predicted": "MEL",
700
  "count": 8,
701
  "rate_of_true": 0.053691275167785234
702
  },
703
  {
704
+ "true": "SCCKA",
705
+ "predicted": "BKL",
706
+ "count": 8,
707
+ "rate_of_true": 0.08421052631578947
708
+ },
709
+ {
710
+ "true": "BCC",
711
+ "predicted": "BKL",
712
  "count": 7,
713
+ "rate_of_true": 0.013888888888888888
714
  },
715
  {
716
  "true": "BKL",
717
+ "predicted": "NV",
718
  "count": 6,
719
  "rate_of_true": 0.05504587155963303
720
  },
 
 
 
 
 
 
721
  {
722
  "true": "INF",
723
  "predicted": "BCC",
724
+ "count": 6,
725
+ "rate_of_true": 0.6
 
 
 
 
 
 
726
  },
727
  {
728
+ "true": "NV",
729
+ "predicted": "BCC",
730
+ "count": 6,
731
+ "rate_of_true": 0.040268456375838924
732
  },
733
  {
734
  "true": "BCC",
735
+ "predicted": "MEL",
736
  "count": 4,
737
  "rate_of_true": 0.007936507936507936
738
+ },
739
+ {
740
+ "true": "BCC",
741
+ "predicted": "AKIEC",
742
+ "count": 3,
743
+ "rate_of_true": 0.005952380952380952
744
  }
745
  ],
746
  "watched_confusion_patterns": [
747
  {
748
  "true": "BCC",
749
  "predicted": "SCCKA",
750
+ "count": 28,
751
+ "rate_of_true": 0.05555555555555555
752
  },
753
  {
754
  "true": "AKIEC",
755
  "predicted": "SCCKA",
756
+ "count": 12,
757
+ "rate_of_true": 0.19672131147540983
 
 
 
 
 
 
758
  },
759
  {
760
  "true": "BKL",
 
764
  },
765
  {
766
  "true": "SCCKA",
767
+ "predicted": "BKL",
768
+ "count": 8,
769
+ "rate_of_true": 0.08421052631578947
770
  },
771
  {
772
+ "true": "BCC",
773
+ "predicted": "BKL",
774
+ "count": 7,
775
+ "rate_of_true": 0.013888888888888888
776
  },
777
  {
778
+ "true": "INF",
779
+ "predicted": "BCC",
780
+ "count": 6,
781
+ "rate_of_true": 0.6
782
  },
783
  {
784
  "true": "BCC",
785
+ "predicted": "AKIEC",
786
+ "count": 3,
787
+ "rate_of_true": 0.005952380952380952
788
  },
789
  {
790
+ "true": "SCCKA",
791
+ "predicted": "AKIEC",
792
+ "count": 3,
793
+ "rate_of_true": 0.031578947368421054
794
  },
795
  {
796
  "true": "INF",
797
+ "predicted": "NV",
798
  "count": 1,
799
  "rate_of_true": 0.1
800
  }
singleenc_pool_meta_clean/run_report.md CHANGED
@@ -24,13 +24,13 @@
24
 
25
  ## Final Metrics
26
 
27
- - accuracy: 0.7127862595419847
28
- - balanced_accuracy: 0.41498903371947654
29
- - dice_macro: 0.4352677414310993
30
- - f1_macro: 0.4352677414310993
31
- - roc_auc_macro_ovr: 0.9120777303344489
32
- - top2_accuracy: 0.8721374045801527
33
- - top3_accuracy: 0.9360687022900763
34
 
35
  ## Data Distribution
36
 
@@ -80,81 +80,80 @@
80
 
81
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
82
  | --- | --- | --- | --- | --- | --- | --- | --- |
83
- | AKIEC | 61 | 0.489362 | 0.377049 | 0.975684 | 0.425926 | 0.920358 | 0.74096 |
84
- | BCC | 504 | 0.786325 | 0.912698 | 0.770221 | 0.844812 | 0.920051 | 0.919828 |
85
- | BEN_OTH | 9 | 0.5 | 0.111111 | 0.999038 | 0.181818 | 0.868677 | 0.937172 |
86
- | BKL | 109 | 0.529412 | 0.330275 | 0.965921 | 0.40678 | 0.816484 | 0.762888 |
87
- | DF | 10 | 0.5 | 0.3 | 0.99711 | 0.375 | 0.979287 | 0.708548 |
88
- | INF | 10 | 0 | 0 | 0.999037 | 0 | 0.905588 | |
89
- | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.858031 | |
90
- | MEL | 90 | 0.642857 | 0.5 | 0.973904 | 0.5625 | 0.901067 | 0.810999 |
91
- | NV | 149 | 0.73913 | 0.798658 | 0.953281 | 0.767742 | 0.966943 | 0.903091 |
92
- | SCCKA | 95 | 0.545455 | 0.568421 | 0.952781 | 0.556701 | 0.924173 | 0.869854 |
93
- | VASC | 9 | 0.666667 | 0.666667 | 0.997113 | 0.666667 | 0.972195 | 0.830316 |
94
 
95
  ## Weak Classes
96
 
97
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
98
  | --- | --- | --- | --- | --- | --- | --- | --- |
99
- | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.858031 | |
100
- | INF | 10 | 0 | 0 | 0.999037 | 0 | 0.905588 | |
101
- | BEN_OTH | 9 | 0.5 | 0.111111 | 0.999038 | 0.181818 | 0.868677 | 0.937172 |
102
- | DF | 10 | 0.5 | 0.3 | 0.99711 | 0.375 | 0.979287 | 0.708548 |
103
- | BKL | 109 | 0.529412 | 0.330275 | 0.965921 | 0.40678 | 0.816484 | 0.762888 |
104
 
105
  ## Prediction Distribution
106
 
107
  | class | pred_count | mean_prob |
108
  |---|---:|---:|
109
- | AKIEC | 47 | 0.0512 |
110
- | BCC | 585 | 0.5248 |
111
- | BEN_OTH | 2 | 0.0058 |
112
- | BKL | 68 | 0.0787 |
113
- | DF | 6 | 0.0069 |
114
- | INF | 1 | 0.0042 |
115
- | MAL_OTH | 0 | 0.0007 |
116
- | MEL | 70 | 0.0738 |
117
- | NV | 161 | 0.1486 |
118
- | SCCKA | 99 | 0.0971 |
119
- | VASC | 9 | 0.0082 |
120
-
121
- - mean_confidence: 0.8461607694625854
122
- - median_confidence: 0.9354076385498047
123
- - mean_top1_top2_gap: 0.7422125339508057
124
- - mean_entropy: 0.43954163789749146
125
- - low_confidence_rows: 67
126
 
127
  ## Top Confusion Pairs
128
 
129
  | true | predicted | count | rate_of_true |
130
  |---|---|---:|---:|
131
- | BKL | BCC | 43 | 0.394 |
132
- | SCCKA | BCC | 30 | 0.316 |
133
- | MEL | NV | 28 | 0.311 |
134
- | BCC | SCCKA | 20 | 0.040 |
135
- | AKIEC | BCC | 18 | 0.295 |
136
- | NV | MEL | 12 | 0.081 |
137
- | AKIEC | SCCKA | 11 | 0.180 |
138
- | BCC | AKIEC | 11 | 0.022 |
139
  | BKL | SCCKA | 11 | 0.101 |
140
- | MEL | BCC | 10 | 0.111 |
141
- | AKIEC | BKL | 9 | 0.148 |
142
- | NV | BCC | 9 | 0.060 |
 
143
 
144
  ## Watched Confusion Patterns
145
 
146
  | true | predicted | count | rate_of_true |
147
  |---|---|---:|---:|
148
- | BCC | SCCKA | 20 | 0.040 |
149
- | AKIEC | SCCKA | 11 | 0.180 |
150
- | BCC | AKIEC | 11 | 0.022 |
151
  | BKL | SCCKA | 11 | 0.101 |
152
- | SCCKA | AKIEC | 6 | 0.063 |
153
- | INF | BCC | 5 | 0.500 |
154
- | SCCKA | BKL | 5 | 0.053 |
155
- | BCC | BKL | 4 | 0.008 |
156
- | INF | NV | 2 | 0.200 |
157
- | INF | BEN_OTH | 1 | 0.100 |
158
 
159
  ## Warnings
160
 
 
24
 
25
  ## Final Metrics
26
 
27
+ - accuracy: 0.7108778625954199
28
+ - balanced_accuracy: 0.4243347533948689
29
+ - dice_macro: 0.45318287891961967
30
+ - f1_macro: 0.45318287891961967
31
+ - roc_auc_macro_ovr: 0.9174702018794881
32
+ - top2_accuracy: 0.8692748091603053
33
+ - top3_accuracy: 0.9427480916030534
34
 
35
  ## Data Distribution
36
 
 
80
 
81
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
82
  | --- | --- | --- | --- | --- | --- | --- | --- |
83
+ | AKIEC | 61 | 0.590909 | 0.213115 | 0.990881 | 0.313253 | 0.942515 | 0.597855 |
84
+ | BCC | 504 | 0.798951 | 0.906746 | 0.788603 | 0.849442 | 0.925063 | 0.865497 |
85
+ | BEN_OTH | 9 | 1 | 0.111111 | 1 | 0.2 | 0.877232 | 0.482916 |
86
+ | BKL | 109 | 0.445652 | 0.376147 | 0.945687 | 0.40796 | 0.78903 | 0.698416 |
87
+ | DF | 10 | 0.75 | 0.3 | 0.999037 | 0.428571 | 0.985645 | 0.560032 |
88
+ | INF | 10 | 0.333333 | 0.1 | 0.998073 | 0.153846 | 0.953565 | 0.335535 |
89
+ | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.844168 | |
90
+ | MEL | 90 | 0.619048 | 0.433333 | 0.974948 | 0.509804 | 0.901276 | 0.72337 |
91
+ | NV | 149 | 0.730994 | 0.838926 | 0.948832 | 0.78125 | 0.963531 | 0.822151 |
92
+ | SCCKA | 95 | 0.522523 | 0.610526 | 0.944386 | 0.563107 | 0.930358 | 0.817618 |
93
+ | VASC | 9 | 0.777778 | 0.777778 | 0.998075 | 0.777778 | 0.979788 | 0.627882 |
94
 
95
  ## Weak Classes
96
 
97
  | class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
98
  | --- | --- | --- | --- | --- | --- | --- | --- |
99
+ | MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.844168 | |
100
+ | INF | 10 | 0.333333 | 0.1 | 0.998073 | 0.153846 | 0.953565 | 0.335535 |
101
+ | BEN_OTH | 9 | 1 | 0.111111 | 1 | 0.2 | 0.877232 | 0.482916 |
102
+ | AKIEC | 61 | 0.590909 | 0.213115 | 0.990881 | 0.313253 | 0.942515 | 0.597855 |
103
+ | BKL | 109 | 0.445652 | 0.376147 | 0.945687 | 0.40796 | 0.78903 | 0.698416 |
104
 
105
  ## Prediction Distribution
106
 
107
  | class | pred_count | mean_prob |
108
  |---|---:|---:|
109
+ | AKIEC | 22 | 0.0426 |
110
+ | BCC | 572 | 0.4831 |
111
+ | BEN_OTH | 1 | 0.0051 |
112
+ | BKL | 92 | 0.1090 |
113
+ | DF | 4 | 0.0063 |
114
+ | INF | 3 | 0.0095 |
115
+ | MAL_OTH | 0 | 0.0015 |
116
+ | MEL | 63 | 0.0723 |
117
+ | NV | 171 | 0.1524 |
118
+ | SCCKA | 111 | 0.1081 |
119
+ | VASC | 9 | 0.0101 |
120
+
121
+ - mean_confidence: 0.7764731645584106
122
+ - median_confidence: 0.8540850877761841
123
+ - mean_top1_top2_gap: 0.6493982076644897
124
+ - mean_entropy: 0.6740277409553528
125
+ - low_confidence_rows: 152
126
 
127
  ## Top Confusion Pairs
128
 
129
  | true | predicted | count | rate_of_true |
130
  |---|---|---:|---:|
131
+ | BKL | BCC | 39 | 0.358 |
132
+ | MEL | NV | 30 | 0.333 |
133
+ | BCC | SCCKA | 28 | 0.056 |
134
+ | SCCKA | BCC | 26 | 0.274 |
135
+ | AKIEC | BCC | 22 | 0.361 |
136
+ | AKIEC | BKL | 14 | 0.230 |
137
+ | AKIEC | SCCKA | 12 | 0.197 |
 
138
  | BKL | SCCKA | 11 | 0.101 |
139
+ | MEL | BKL | 10 | 0.111 |
140
+ | NV | BKL | 10 | 0.067 |
141
+ | MEL | BCC | 9 | 0.100 |
142
+ | BKL | MEL | 8 | 0.073 |
143
 
144
  ## Watched Confusion Patterns
145
 
146
  | true | predicted | count | rate_of_true |
147
  |---|---|---:|---:|
148
+ | BCC | SCCKA | 28 | 0.056 |
149
+ | AKIEC | SCCKA | 12 | 0.197 |
 
150
  | BKL | SCCKA | 11 | 0.101 |
151
+ | SCCKA | BKL | 8 | 0.084 |
152
+ | BCC | BKL | 7 | 0.014 |
153
+ | INF | BCC | 6 | 0.600 |
154
+ | BCC | AKIEC | 3 | 0.006 |
155
+ | SCCKA | AKIEC | 3 | 0.032 |
156
+ | INF | NV | 1 | 0.100 |
157
 
158
  ## Warnings
159
 
singleenc_pool_meta_clean/val_predictions.csv CHANGED
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