| from __future__ import annotations |
|
|
| import multiprocessing |
| import multiprocessing.synchronize |
| from multiprocessing.managers import SharedMemoryManager |
| from multiprocessing.shared_memory import SharedMemory |
| from typing import Any, TYPE_CHECKING, Generic, Optional, Tuple, TypeVar, Union |
|
|
| import numpy as np |
| import numpy.typing as npt |
| from umi.common.nested_dict_util import nested_dict_check, nested_dict_map |
|
|
|
|
| SharedMemoryLike = Union[str, SharedMemory] |
| SharedT = TypeVar("SharedT", bound=np.generic) |
|
|
|
|
| class SharedNDArray(Generic[SharedT]): |
| """Class to keep track of and retrieve the data in a shared array |
| Attributes |
| ---------- |
| shm |
| SharedMemory object containing the data of the array |
| shape |
| Shape of the NumPy array |
| dtype |
| Type of the NumPy array. Anything that may be passed to the `dtype=` argument in `np.ndarray`. |
| lock |
| (Optional) multiprocessing.Lock to manage access to the SharedNDArray. This is only created if |
| lock=True is passed to the constructor, otherwise it is set to `None`. |
| A SharedNDArray object may be created either directly with a preallocated shared memory object plus the |
| dtype and shape of the numpy array it represents: |
| >>> from multiprocessing.shared_memory import SharedMemory |
| >>> import numpy as np |
| >>> from shared_ndarray2 import SharedNDArray |
| >>> x = np.array([1, 2, 3]) |
| >>> shm = SharedMemory(name="x", create=True, size=x.nbytes) |
| >>> arr = SharedNDArray(shm, x.shape, x.dtype) |
| >>> arr[:] = x[:] # copy x into the array |
| >>> print(arr[:]) |
| [1 2 3] |
| >>> shm.close() |
| >>> shm.unlink() |
| Or using a SharedMemoryManager either from an existing array or from arbitrary shape and nbytes: |
| >>> from multiprocessing.managers import SharedMemoryManager |
| >>> mem_mgr = SharedMemoryManager() |
| >>> mem_mgr.start() # Better yet, use SharedMemoryManager context manager |
| >>> arr = SharedNDArray.from_shape(mem_mgr, x.shape, x.dtype) |
| >>> arr[:] = x[:] # copy x into the array |
| >>> print(arr[:]) |
| [1 2 3] |
| >>> # -or in one step- |
| >>> arr = SharedNDArray.from_array(mem_mgr, x) |
| >>> print(arr[:]) |
| [1 2 3] |
| `SharedNDArray` does not subclass numpy.ndarray but rather generates an ndarray on-the-fly in get(), |
| which is used in __getitem__ and __setitem__. Thus to access the data and/or use any ndarray methods |
| get() or __getitem__ or __setitem__ must be used |
| >>> arr.max() # ERROR: SharedNDArray has no `max` method. |
| Traceback (most recent call last): |
| .... |
| AttributeError: SharedNDArray object has no attribute 'max'. To access NumPy ndarray object use .get() method. |
| >>> arr.get().max() # (or arr[:].max()) OK: This gets an ndarray on which we can operate |
| 3 |
| >>> y = np.zeros(3) |
| >>> y[:] = arr # ERROR: Cannot broadcast-assign a SharedNDArray to ndarray `y` |
| Traceback (most recent call last): |
| ... |
| ValueError: setting an array element with a sequence. |
| >>> y[:] = arr[:] # OK: This gets an ndarray that can be copied element-wise to `y` |
| >>> mem_mgr.shutdown() |
| """ |
|
|
| shm: SharedMemory |
| |
| dtype: np.dtype |
| lock: Optional[multiprocessing.synchronize.Lock] |
|
|
| def __init__( |
| self, shm: SharedMemoryLike, shape: Tuple[int, ...], dtype: npt.DTypeLike |
| ): |
| """Initialize a SharedNDArray object from existing shared memory, object shape, and dtype. |
| To initialize a SharedNDArray object from a memory manager and data or shape, use the `from_array() |
| or `from_shape()` classmethods. |
| Parameters |
| ---------- |
| shm |
| `multiprocessing.shared_memory.SharedMemory` object or name for connecting to an existing block |
| of shared memory (using SharedMemory constructor) |
| shape |
| Shape of the NumPy array to be represented in the shared memory |
| dtype |
| Data type for the NumPy array to be represented in shared memory. Any valid argument for |
| `np.dtype` may be used as it will be converted to an actual `dtype` object. |
| lock : bool, optional |
| If True, create a multiprocessing.Lock object accessible with the `.lock` attribute, by default |
| False. If passing the `SharedNDArray` as an argument to a `multiprocessing.Pool` function this |
| should not be used -- see this comment to a Stack Overflow question about `multiprocessing.Lock`: |
| https://stackoverflow.com/questions/25557686/python-sharing-a-lock-between-processes#comment72803059_25558333 |
| Raises |
| ------ |
| ValueError |
| The SharedMemory size (number of bytes) does not match the product of the shape and dtype |
| itemsize. |
| """ |
| if isinstance(shm, str): |
| shm = SharedMemory(name=shm, create=False) |
| dtype = np.dtype(dtype) |
| assert shm.size >= (dtype.itemsize * np.prod(shape)) |
| self.shm = shm |
| self.dtype = dtype |
| self._shape: Tuple[int, ...] = shape |
|
|
| def __repr__(self): |
| |
| cls_name = self.__class__.__name__ |
| nspaces = len(cls_name) + 1 |
| array_repr = str(self.get()) |
| array_repr = array_repr.replace("\n", "\n" + " " * nspaces) |
| return f"{cls_name}({array_repr}, dtype={self.dtype})" |
|
|
| @classmethod |
| def create_from_array( |
| cls, mem_mgr: SharedMemoryManager, arr: npt.NDArray[SharedT] |
| ) -> SharedNDArray[SharedT]: |
| """Create a SharedNDArray from a SharedMemoryManager and an existing numpy array. |
| Parameters |
| ---------- |
| mem_mgr |
| Running `multiprocessing.managers.SharedMemoryManager` instance from which to create the |
| SharedMemory for the SharedNDArray |
| arr |
| NumPy `ndarray` object to copy into the created SharedNDArray upon initialization. |
| """ |
| |
| shared_arr = cls.create_from_shape(mem_mgr, arr.shape, arr.dtype) |
| shared_arr.get()[:] = arr[:] |
| return shared_arr |
|
|
| @classmethod |
| def create_from_shape( |
| cls, mem_mgr: SharedMemoryManager, shape: Tuple, dtype: npt.DTypeLike |
| ) -> SharedNDArray: |
| """Create a SharedNDArray directly from a SharedMemoryManager |
| Parameters |
| ---------- |
| mem_mgr |
| SharedMemoryManager instance that has been started |
| shape |
| Shape of the array |
| dtype |
| Data type for the NumPy array to be represented in shared memory. Any valid argument for |
| `np.dtype` may be used as it will be converted to an actual `dtype` object. |
| """ |
| dtype = np.dtype(dtype) |
| shm = mem_mgr.SharedMemory(np.prod(shape) * dtype.itemsize) |
| return cls(shm=shm, shape=shape, dtype=dtype) |
|
|
| @property |
| def shape(self) -> Tuple[int, ...]: |
| return self._shape |
|
|
| def get(self) -> npt.NDArray[SharedT]: |
| """Get a numpy array with access to the shared memory""" |
| return np.ndarray(self.shape, dtype=self.dtype, buffer=self.shm.buf) |
|
|
| def __del__(self): |
| self.shm.close() |
|
|