PhysVLM / other_transfer /src /physics_sft /prepare_data.py
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"""CSV → jsonl splits + axiom rewrite + coverage report. No model imports."""
from __future__ import annotations
import argparse
import csv
import json
import random
import sys
from collections import Counter
from pathlib import Path
from .axioms import match_cot, rewrite_cot_assistant
TEXT_CSV = Path("Physics_Dataset/Physics_Dataset_no_image.csv")
IMAGE_CSV = Path("Physics_Dataset/Physics_dataset_with_image.csv")
IMAGE_DIR = Path("Physics_Dataset/Image")
DEFAULT_OUT = Path("data/physics_sft")
SPLIT_SEED = 42
TRAIN_RATIO = 0.90
VAL_RATIO = 0.05
def repo_root_from_here() -> Path:
here = Path(__file__).resolve()
for parent in here.parents:
if (parent / "Physics_Dataset").is_dir() and (parent / "CLAUDE.md").exists():
return parent
return Path.cwd()
def load_csv(path: Path) -> list[dict[str, str]]:
with path.open(newline="", encoding="utf-8") as handle:
return list(csv.DictReader(handle))
def is_empty_answer(value: str | None) -> bool:
return not (value or "").strip()
def resolve_image_path(id_image: str, image_dir: Path) -> Path:
candidate = image_dir / id_image
if candidate.is_file():
return candidate
raise FileNotFoundError(f"Missing diagram for id_image={id_image!r}: {candidate}")
def split_keys(keys: list[str], seed: int) -> dict[str, str]:
rng = random.Random(seed)
ordered = list(keys)
rng.shuffle(ordered)
n = len(ordered)
n_val = max(1, int(round(n * VAL_RATIO))) if n >= 3 else (1 if n >= 2 else 0)
n_test = max(1, int(round(n * VAL_RATIO))) if n >= 3 else (1 if n >= 3 else 0)
if n_val + n_test >= n:
n_val = 1 if n >= 3 else 0
n_test = 1 if n >= 3 else 0
n_train = n - n_val - n_test
assignment: dict[str, str] = {}
for i, key in enumerate(ordered):
if i < n_train:
assignment[key] = "train"
elif i < n_train + n_val:
assignment[key] = "val"
else:
assignment[key] = "test"
return assignment
def record_from_row(
row: dict[str, str],
*,
has_image: bool,
image_path: str | None,
) -> dict:
assistant, axiom_ids = rewrite_cot_assistant(row.get("cot") or "", row.get("answer") or "", row.get("unit") or "")
return {
"id": row["id"],
"has_image": has_image,
"image_path": image_path,
"question": row.get("question") or "",
"axiom_ids": axiom_ids,
"assistant": assistant,
}
def write_jsonl(path: Path, rows: list[dict]) -> None:
path.parent.mkdir(parents=True, exist_ok=True)
with path.open("w", encoding="utf-8") as handle:
for row in rows:
handle.write(json.dumps(row, ensure_ascii=False) + "\n")
def coverage_report(records: list[dict]) -> dict:
hist: Counter[str] = Counter()
n_with = 0
for rec in records:
ids = rec.get("axiom_ids") or []
if ids:
n_with += 1
for axiom_id in ids:
hist[axiom_id] += 1
n = len(records)
n_zero = n - n_with
return {
"n_rows": n,
"n_with_axiom": n_with,
"n_without_axiom": n_zero,
"pct_with_axiom": round(100.0 * n_with / n, 2) if n else 0.0,
"pct_without_axiom": round(100.0 * n_zero / n, 2) if n else 0.0,
"axiom_histogram": dict(hist.most_common()),
}
def print_coverage(report: dict) -> None:
print("=== axiom matcher coverage ===")
print(f"rows {report['n_rows']}")
print(f">=1 axiom {report['n_with_axiom']} ({report['pct_with_axiom']}%)")
print(f"0 axioms {report['n_without_axiom']} ({report['pct_without_axiom']}%)")
print("histogram:")
for axiom_id, count in report["axiom_histogram"].items():
print(f" {axiom_id:8} {count}")
def build_records(root: Path) -> tuple[list[dict], list[str], dict]:
text_rows = load_csv(root / TEXT_CSV)
image_rows = load_csv(root / IMAGE_CSV)
image_dir = root / IMAGE_DIR
dropped: list[str] = []
records: list[dict] = []
for row in text_rows:
if is_empty_answer(row.get("answer")):
dropped.append(row["id"])
continue
rec = record_from_row(row, has_image=False, image_path=None)
rec["_split_key"] = row["id"]
rec["_split_kind"] = "text"
records.append(rec)
for row in image_rows:
if is_empty_answer(row.get("answer")):
dropped.append(row["id"])
continue
resolved = resolve_image_path(row["id_image"], image_dir)
rel = resolved.relative_to(root).as_posix()
rec = record_from_row(row, has_image=True, image_path=rel)
rec["_id_image"] = row["id_image"]
rec["_split_key"] = row["id_image"]
rec["_split_kind"] = "image"
records.append(rec)
return records, dropped, {
"n_text_csv": len(text_rows),
"n_image_csv": len(image_rows),
}
def assign_splits(records: list[dict], seed: int) -> dict:
text_keys = sorted({r["_split_key"] for r in records if r["_split_kind"] == "text"})
image_keys = sorted({r["_split_key"] for r in records if r["_split_kind"] == "image"})
text_map = split_keys(text_keys, seed)
image_map = split_keys(image_keys, seed + 1)
manifest = {"seed": seed, "text": {"train": [], "val": [], "test": []}, "image": {"train": [], "val": [], "test": []}}
for rec in records:
if rec["_split_kind"] == "text":
split = text_map[rec["_split_key"]]
rec["split"] = split
manifest["text"][split].append(rec["id"])
else:
split = image_map[rec["_split_key"]]
rec["split"] = split
manifest["image"][split].append({"id": rec["id"], "id_image": rec["_id_image"]})
return manifest
def main(argv: list[str] | None = None) -> int:
parser = argparse.ArgumentParser(description="Prepare physics SFT jsonl splits.")
parser.add_argument("--root", type=Path, default=None)
parser.add_argument("--out", type=Path, default=DEFAULT_OUT)
parser.add_argument("--seed", type=int, default=SPLIT_SEED)
args = parser.parse_args(argv)
root = (args.root or repo_root_from_here()).resolve()
out = args.out if args.out.is_absolute() else root / args.out
out.mkdir(parents=True, exist_ok=True)
records, dropped, counts = build_records(root)
print(f"dropped empty-answer ids ({len(dropped)}): {dropped}")
print(f"csv text={counts['n_text_csv']} image={counts['n_image_csv']}")
manifest = assign_splits(records, args.seed)
splits: dict[str, list[dict]] = {"train": [], "val": [], "test": []}
for rec in records:
splits[rec["split"]].append(rec)
clean_splits: dict[str, list[dict]] = {}
for name, rows in splits.items():
cleaned = []
for rec in rows:
cleaned.append(
{
"id": rec["id"],
"has_image": rec["has_image"],
"image_path": rec["image_path"],
"question": rec["question"],
"axiom_ids": rec["axiom_ids"],
"assistant": rec["assistant"],
}
)
clean_splits[name] = cleaned
write_jsonl(out / f"{name}.jsonl", cleaned)
report = coverage_report([rec for recs in clean_splits.values() for rec in recs])
(out / "coverage.json").write_text(json.dumps(report, ensure_ascii=False, indent=2) + "\n", encoding="utf-8")
(out / "split_manifest.json").write_text(json.dumps(manifest, ensure_ascii=False, indent=2) + "\n", encoding="utf-8")
(out / "dropped_ids.json").write_text(json.dumps(dropped, ensure_ascii=False, indent=2) + "\n", encoding="utf-8")
print_coverage(report)
print("=== split sizes ===")
for name, rows in clean_splits.items():
n_img = sum(1 for r in rows if r["has_image"])
n_txt = len(rows) - n_img
max_chars = max((len(r["assistant"]) for r in rows), default=0)
print(f"{name:5} n={len(rows):5} text={n_txt:4} image={n_img:4} max_assistant_chars={max_chars}")
if report["pct_with_axiom"] < 25.0:
print("WARNING: >=1 axiom coverage is under 25%. Loosen matcher rules before training.", file=sys.stderr)
return 2
return 0
if __name__ == "__main__":
raise SystemExit(main())