houlab commited on
Commit
3f8040e
·
verified ·
1 Parent(s): df6290a

Fix Leontis-Westhof classes parsed from the export's groove notation (m = sugar edge, M = Hoogsteen): 8,613 CoSSMos pairs relabelled, mostly sheared G-A pairs stored as tHH

Browse files
Files changed (6) hide show
  1. basepairs.parquet +2 -2
  2. entries.parquet +2 -2
  3. facets.json +20 -20
  4. groups.parquet +2 -2
  5. instances.parquet +2 -2
  6. quality.json +6 -1
basepairs.parquet CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:0b1c57e426b5975ef37805dc593349f80950d8d33f7f4ed3f47d8d2ecd3ea9d6
3
- size 8620635
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c715b8181fe1311013c6e742e5bc6ccdca485c7eece51e15f24e37a5c4ea2001
3
+ size 8621249
entries.parquet CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:45beed87fc08a55b941af013753c08d18ad17b75a3a9c2dcfe1c82fb4f5dcd6f
3
- size 1058591
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:03eb861d6d243e515c1f65ca9af52b72f3d72f16f9fd95f350ab6f0c158f0fe1
3
+ size 1058542
facets.json CHANGED
@@ -1147,39 +1147,35 @@
1147
  },
1148
  {
1149
  "value": "tSH",
1150
- "count": 64432
1151
  },
1152
  {
1153
  "value": "tWH",
1154
- "count": 23454
1155
  },
1156
  {
1157
- "value": "cSH",
1158
- "count": 18322
1159
  },
1160
  {
1161
- "value": "tHS",
1162
- "count": 16566
1163
  },
1164
  {
1165
  "value": "cSW",
1166
- "count": 14141
1167
  },
1168
  {
1169
  "value": "tHW",
1170
- "count": 10585
1171
- },
1172
- {
1173
- "value": "tHH",
1174
- "count": 7652
1175
  },
1176
  {
1177
  "value": "cWH",
1178
- "count": 6762
1179
  },
1180
  {
1181
  "value": "tSW",
1182
- "count": 6046
1183
  },
1184
  {
1185
  "value": "tWW",
@@ -1187,19 +1183,23 @@
1187
  },
1188
  {
1189
  "value": "cWS",
1190
- "count": 5301
 
 
 
 
1191
  },
1192
  {
1193
  "value": "cHW",
1194
- "count": 3469
1195
  },
1196
  {
1197
  "value": "tWS",
1198
- "count": 2822
1199
  },
1200
  {
1201
  "value": "cHH",
1202
- "count": 1256
1203
  },
1204
  {
1205
  "value": "tSS",
@@ -1207,11 +1207,11 @@
1207
  },
1208
  {
1209
  "value": "cSS",
1210
- "count": 898
1211
  },
1212
  {
1213
  "value": "cHS",
1214
- "count": 648
1215
  },
1216
  {
1217
  "value": "t.W",
 
1147
  },
1148
  {
1149
  "value": "tSH",
1150
+ "count": 68472
1151
  },
1152
  {
1153
  "value": "tWH",
1154
+ "count": 23185
1155
  },
1156
  {
1157
+ "value": "tHS",
1158
+ "count": 19607
1159
  },
1160
  {
1161
+ "value": "cSH",
1162
+ "count": 18416
1163
  },
1164
  {
1165
  "value": "cSW",
1166
+ "count": 14307
1167
  },
1168
  {
1169
  "value": "tHW",
1170
+ "count": 10562
 
 
 
 
1171
  },
1172
  {
1173
  "value": "cWH",
1174
+ "count": 6722
1175
  },
1176
  {
1177
  "value": "tSW",
1178
+ "count": 6069
1179
  },
1180
  {
1181
  "value": "tWW",
 
1183
  },
1184
  {
1185
  "value": "cWS",
1186
+ "count": 5341
1187
+ },
1188
+ {
1189
+ "value": "tHH",
1190
+ "count": 3474
1191
  },
1192
  {
1193
  "value": "cHW",
1194
+ "count": 3303
1195
  },
1196
  {
1197
  "value": "tWS",
1198
+ "count": 3092
1199
  },
1200
  {
1201
  "value": "cHH",
1202
+ "count": 1137
1203
  },
1204
  {
1205
  "value": "tSS",
 
1207
  },
1208
  {
1209
  "value": "cSS",
1210
+ "count": 917
1211
  },
1212
  {
1213
  "value": "cHS",
1214
+ "count": 657
1215
  },
1216
  {
1217
  "value": "t.W",
groups.parquet CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:4b4f841062d2312650cff82e4d66f304aece8d8c31279f8b8ecbc613d29f5e40
3
- size 1032669
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:630323867f41bd683b397e82e243c1b20c2dd414cac01227f85bb032f133a801
3
+ size 1033020
instances.parquet CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:b4b2bf0d15ff62e39c014e83d43ff8f96c3d86a8cf69b08e3db368a7926905ef
3
- size 17949115
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ccbb7d47685a2ee3bc5388889ebf4fb06d198b6244b94bbd449413903b1e900b
3
+ size 17948325
quality.json CHANGED
@@ -2661,5 +2661,10 @@
2661
  "unsplittable": 0,
2662
  "no_entry_meta": 18
2663
  },
2664
- "links_refreshed": "2026-09-30"
 
 
 
 
 
2665
  }
 
2661
  "unsplittable": 0,
2662
  "no_entry_meta": 18
2663
  },
2664
+ "links_refreshed": "2026-09-30",
2665
+ "lw_case_fix": {
2666
+ "date": "2026-10-01",
2667
+ "pairs_relabelled": 8613,
2668
+ "instances_updated": 4445
2669
+ }
2670
  }