Commit ·
c812115
1
Parent(s): ae9dcd2
fix: replicate scores included averaged values spread across the rows
Browse files
DOCS.md
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## Replicate Datasets
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We include datasets that contain all of the replicates that were used to generate the binding and specificity mean scores/standard errors. As a result, the standard error columns are removed, and, for simplicity, we provide a row for each dose (column called `antigen_concentration_nM`).
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## Replicate Datasets
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We include datasets that contain all of the replicates that were used to generate the binding and specificity mean scores/standard errors. As a result, the standard error columns are removed, and, for simplicity, we provide a row for each dose (column called `antigen_concentration_nM`). To further improve our data provenance, we include unique molecular identifier (UMI) counts for the expression and binding samples, along with sample ids for the expression and binding samples. The added columns are called:
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- `expression_sample_id`: The sample id of the expression sample.
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- `binding_sample_id`: The sample id of the binding sample.
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- `expression_umi_count`: The number of unique molecular identifiers (UMIs) observed for the binder in the expression sample.
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- `binding_umi_count`: The number of unique molecular identifiers (UMIs) observed for the binder in the binding sample.
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These columns are included in the binding replicates dataset, while the other two (expression-replicates and specificity-replicates) do not, for now. They can be made available upon request!
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binding-replicates/binding-scores-with-replicates.parquet
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version https://git-lfs.github.com/spec/v1
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size
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version https://git-lfs.github.com/spec/v1
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size 11689416
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specificity-replicates/specificity-scores-with-replicates.parquet
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size
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version https://git-lfs.github.com/spec/v1
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size 3642144
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