File size: 4,496 Bytes
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from haddock.libs.libgrid import (
GridJob,
CompositeGridJob,
JobStatus,
Tag,
ping_dirac,
validate_dirac,
)
@pytest.fixture
def dummy_paths(tmp_path):
toppar = tmp_path / "toppar"
toppar.mkdir()
module = tmp_path / "module"
module.mkdir()
return toppar, module
def test_gridjob_create_jdl_and_job_script(dummy_paths):
toppar, module = dummy_paths
job = GridJob(input="input", toppar_path=toppar, module_path=module)
job.name = "testjob"
job.expected_outputs = ["foo.out"]
job.jdl = job.loc / "job.jdl"
job.job_script = job.loc / "job.sh"
job.create_jdl()
job.create_job_script()
assert job.jdl.exists()
assert job.job_script.exists()
content = job.jdl.read_text()
assert f'JobName = "{job.name}";' in content
assert '"foo.out"' in content
def test_gridjob_process_input_f(tmp_path, dummy_paths):
toppar, module = dummy_paths
input_str = '$output_test = "result.txt";\n'
job = GridJob(input=input_str, toppar_path=toppar, module_path=module)
job.name = "testjob"
job.loc = tmp_path
job.input_str = input_str
job.process_input_f()
assert "result.txt" in job.expected_outputs
inp_file = tmp_path / f"{job.name}.inp"
assert inp_file.exists()
def test_compositegridjob_parse_input_and_process(dummy_paths):
toppar, module = dummy_paths
input_list = ["line1\nstop\n", "line2\nstop\n"]
job = CompositeGridJob(input=input_list, toppar_path=toppar, module_path=module)
assert len(job.input_str_list) == 2
job.process_input_f()
for idx in range(2):
inp_file = job.loc / f"{idx}_{job.name}.inp"
assert inp_file.exists()
def test_gridjob_repr(dummy_paths):
toppar, module = dummy_paths
job = GridJob(input="input", toppar_path=toppar, module_path=module)
s = repr(job)
assert "ID:" in s and "Name:" in s and "Status:" in s
def test_jobstatus_from_string():
assert JobStatus.from_string("Running") == JobStatus.RUNNING
assert JobStatus.from_string("unknown") == JobStatus.UNKNOWN
def test_tag_enum():
assert Tag.PROBING.value == "Probing"
assert Tag.DEFAULT.value == "Default"
def test_parse_output():
s = "JobID=123 Status=Running Site=TestSite;"
d = GridJob.parse_output(s)
assert d["JobID"] == "123"
assert d["Status"] == "Running"
assert d["Site"] == "TestSite"
def test_process_line_and_find_output():
line = '$output_test = "foo.txt";'
new_line, found = GridJob._process_line(line)
assert new_line == line
output = GridJob._find_output(line)
assert output == "foo.txt"
def test_clean_timings(dummy_paths):
toppar, module = dummy_paths
job = GridJob(input="input", toppar_path=toppar, module_path=module)
job.timings = {"foo": 123}
job.clean_timings()
assert job.timings == {}
def test_clean_removes_tmpdir(dummy_paths):
toppar, module = dummy_paths
job = GridJob(input="input", toppar_path=toppar, module_path=module)
loc = job.loc
assert loc.exists()
job.clean()
assert not loc.exists()
def test_ping_and_validate_dirac(monkeypatch):
monkeypatch.setattr("shutil.which", lambda cmd: "/usr/bin/" + cmd)
monkeypatch.setattr(
"subprocess.run",
lambda *a, **k: type(
"R", (), {"returncode": 0, "stderr": b"", "stdout": b""}
)(),
)
assert validate_dirac()
assert ping_dirac()
def test_process_line(tmp_path, monkeypatch):
# No match
line = "no pattern here"
new_line, found = GridJob._process_line(line)
assert new_line == line
assert found is None
# AT_PATTERN match and file exists
test_file = tmp_path / "foo.txt"
test_file.write_text("data")
line = f"@@{test_file}"
monkeypatch.chdir(tmp_path)
new_line, found = GridJob._process_line(line)
assert new_line == line.replace(str(test_file), "foo.txt")
assert found == str(test_file)
# VAR_PATTERN match and file does not exist
line = '($ test="bar.txt")'
new_line, found = GridJob._process_line(line)
assert new_line == line
assert found is None
def test_find_output():
line = '$output_test = "foo.txt";'
output = GridJob._find_output(line)
assert output == "foo.txt"
line2 = "$output_test = bar.txt;"
output2 = GridJob._find_output(line2)
assert output2 == "bar.txt"
line3 = "no output here"
output3 = GridJob._find_output(line3)
assert output3 is None
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