Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw2/cat.csv

@@ -0,0 +1,301 @@
+dataset,design,unit,arm,predictor,celltype,k,k_eff,cat_same_sign,cat_any_sign,chance_same_sign,chance_any_sign,G_both,pred_defined,n_tested_obs,n_tested_pred
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+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,generated:zs_pseudo,NK cell,10,10,0.1,0.1,0.0012132977432661976,0.0024265954865323952,4121,True,5582,4126
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,generated:zs_pseudo,NK cell,20,20,0.1,0.1,0.0024265954865323952,0.0048531909730647905,4121,True,5582,4126
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,generated:zs_pseudo,NK cell,50,50,0.3,0.3,0.006066488716330988,0.012132977432661975,4121,True,5582,4126
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,generated:zs_pseudo,NK cell,100,100,0.38,0.38,0.012132977432661975,0.02426595486532395,4121,True,5582,4126
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,generated:zs_pseudo,NK cell,200,200,0.385,0.39,0.02426595486532395,0.0485319097306479,4121,True,5582,4126
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,generated:zs_pseudo,NK cell,500,500,0.364,0.37,0.06066488716330987,0.12132977432661975,4121,True,5582,4126
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+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,NK cell,100,100,0.19,0.19,0.009115770282588878,0.018231540565177756,5485,True,5582,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,NK cell,200,200,0.285,0.285,0.018231540565177756,0.03646308113035551,5485,True,5582,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,NK cell,500,500,0.332,0.338,0.04557885141294439,0.09115770282588878,5485,True,5582,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,generated:scsemi5,DC,10,10,0.0,0.0,0.0030175015087507543,0.006035003017501509,1657,True,5418,1658
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,generated:scsemi5,DC,20,20,0.0,0.0,0.006035003017501509,0.012070006035003017,1657,True,5418,1658
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,generated:scsemi5,DC,50,50,0.06,0.06,0.015087507543753771,0.030175015087507542,1657,True,5418,1658
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,generated:scsemi5,DC,100,100,0.14,0.14,0.030175015087507542,0.060350030175015085,1657,True,5418,1658
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,generated:scsemi5,DC,200,200,0.25,0.26,0.060350030175015085,0.12070006035003017,1657,True,5418,1658
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,generated:scsemi5,DC,500,500,0.29,0.312,0.15087507543753773,0.30175015087507545,1657,True,5418,1658
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,DC,10,10,0.1,0.1,0.0009389671361502347,0.0018779342723004694,5325,True,5418,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,DC,20,20,0.05,0.05,0.0018779342723004694,0.003755868544600939,5325,True,5418,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,DC,50,50,0.12,0.12,0.004694835680751174,0.009389671361502348,5325,True,5418,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,DC,100,100,0.13,0.13,0.009389671361502348,0.018779342723004695,5325,True,5418,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,DC,200,200,0.215,0.215,0.018779342723004695,0.03755868544600939,5325,True,5418,5823
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,broadcast:test_raw.npz@11ba7c4e,DC,500,500,0.248,0.254,0.046948356807511735,0.09389671361502347,5325,True,5418,5823

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw2/ceiling.csv

@@ -0,0 +1,51 @@
+dataset,design,unit,predictor,arm,celltype,n_genes,pearson_mean,pearson_sd,spearman_mean,spearman_sd,pearson_s20260926,spearman_s20260926,pearson_s20260927,spearman_s20260927,pearson_s20260928,spearman_s20260928,pearson_s20260929,spearman_s20260929,pearson_s20260930,spearman_s20260930,sb_reliability_pearson,noise_free_ceiling_pearson,sb_reliability_spearman,noise_free_ceiling_spearman,min_n_case_donors_A,min_n_control_donors_A,min_n_case_donors_B,min_n_control_donors_B,mean_n_cells_A,mean_n_cells_B,condition_sha256
+imperial_eskd,fewshot,fewshot_n5/draw2,split_half_A_vs_B,,T cell,3036.0,0.9655105083566123,0.001009974365691445,0.8573196099452385,0.00458290703540449,0.9651963134656222,0.8597982907312838,0.966416630598453,0.8614393430401343,0.9640905893885586,0.8502848045408502,0.9665575373380473,0.8599160805554471,0.9652914709923811,0.8551595308584774,0.982452654668214,0.9911874972315853,0.9231794090307547,0.960822256731574,103.0,31.0,103.0,31.0,124867.0,124931.0,
+imperial_eskd,fewshot,fewshot_n5/draw2,split_half_A_vs_B,,B cell,3187.0,0.7660326852899179,0.006458564739068765,0.5126252504883726,0.011655210415886743,0.7751996596309633,0.5284981422156775,0.7626514730595729,0.5094711125663433,0.7693375981616705,0.512299258044297,0.76458117910718,0.5165427687440145,0.7583935164902023,0.49631497087153065,0.8675181288212267,0.9314065325201594,0.6777954424902853,0.8232833306282141,103.0,31.0,103.0,31.0,23304.0,23364.0,
+imperial_eskd,fewshot,fewshot_n5/draw2,split_half_A_vs_B,,Monocyte,2886.0,0.873968564347987,0.0026597868504459874,0.6689485243231764,0.005767563536987326,0.8717129241412418,0.6707370291069165,0.8753383452279776,0.6699772111756391,0.8779473758976271,0.6739099156725773,0.8718222824831235,0.6711392669526874,0.8730218939899651,0.6589791987080615,0.9327462380907849,0.965787884626218,0.8016406912183959,0.8953438955051829,102.0,30.0,102.0,31.0,37705.0,37773.0,
+imperial_eskd,fewshot,fewshot_n5/draw2,split_half_A_vs_B,,NK cell,2961.0,0.9200887584564359,0.0022563114466033476,0.7223786271366256,0.0060723819373706,0.9204191723524188,0.7267057546598398,0.9185765705334563,0.7119634310584934,0.9203308498697264,0.7231497089219732,0.9235139144470063,0.7267052341793387,0.9176032850795718,0.723369006863483,0.9583814856518378,0.9789696040489908,0.8388151313019326,0.9158685120157438,103.0,31.0,103.0,31.0,33161.0,33228.0,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_raw,zs_raw,T cell,3036.0,0.6299581025045444,0.0034780621283783653,0.438351485777852,0.0025205634036306484,0.627290174156927,0.43858992634800836,0.6291228294189126,0.43868606757548734,0.6264576921624836,0.434199832881187,0.6320825957248292,0.4410365243803244,0.6348372210595701,0.43924507770425314,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_raw,zs_raw,B cell,3187.0,0.5973752768728289,0.016955723768537528,0.40159866334302946,0.00765258597121413,0.6223091809830495,0.412972757002541,0.5749751435308785,0.3969934577123596,0.5979183046973878,0.39353494540730827,0.5991150250819651,0.3992620773312838,0.5925587300708637,0.4052300792616544,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_raw,zs_raw,Monocyte,2886.0,0.6805306405684328,0.004724759713948511,0.47680615950701355,0.005793578641411461,0.6741497913849742,0.46959098158060336,0.6867062091893408,0.4793839828524085,0.6828494580828129,0.4840170027027505,0.6782843134692789,0.472337390155086,0.6806634307157575,0.4787014402442194,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_raw,zs_raw,NK cell,2961.0,0.5972755648945722,0.0031816796368968636,0.4046533108987994,0.0047337612958358085,0.599741187890657,0.4054082238606641,0.5971973667219207,0.400152834707907,0.5932629252258489,0.40293321935777976,0.6010023609501528,0.41243165107029356,0.5951739836842819,0.40234062549735267,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_pseudo,zs_pseudo,T cell,3036.0,0.6687465822371991,0.0048935985686447,0.24518625993277157,0.004917076704499379,0.6635119853764347,0.2418782282860344,0.671730813778388,0.24345532924060762,0.6656482608671022,0.2503813600093639,0.667203179403477,0.23982756020519055,0.6756386717605929,0.2503888219226613,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_pseudo,zs_pseudo,B cell,3187.0,0.5591103815033792,0.015621730298666751,0.21667922409560242,0.011112247799696391,0.5781908509479629,0.23073536027445735,0.5418473086513667,0.2019710965748467,0.562718390434703,0.22276971337796286,0.5683630577696882,0.2177110773353478,0.5444322997131752,0.21020887291539728,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_pseudo,zs_pseudo,Monocyte,2886.0,0.6750299883726945,0.004355215812079197,0.48312388394054906,0.007479713519388945,0.6673028001984266,0.47494124934164217,0.6769173969442195,0.4784173548857643,0.6763149472140174,0.4807583765322364,0.6778438479935496,0.49327405643635874,0.6767709495132586,0.48822838250674383,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_pseudo,zs_pseudo,NK cell,2961.0,0.7053489679849643,0.0039058628712468975,0.3760157011929043,0.0070305627970150015,0.7103660199917988,0.3793131144847007,0.7068421897166987,0.3656554331865901,0.7013842645839048,0.38469275448809653,0.701368443919403,0.37400172722494296,0.7067839217130157,0.3764154765801912,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_cal,zs_cal,T cell,3036.0,0.6870767229221588,0.004212871914682164,0.33128344061793763,0.004518890546778844,0.6825334609726113,0.3272249583345239,0.6883694195187253,0.32571960941607353,0.68429403341739,0.3346328076022115,0.6867215983972377,0.33312361087340436,0.69346510230483,0.3357162168634751,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_cal,zs_cal,B cell,3187.0,0.5741206735293394,0.023194615022252785,0.27609618015099296,0.015449887719287795,0.6037709393829712,0.2935666489474249,0.5445260829695975,0.2560846147411957,0.5843779657020736,0.28963637126902714,0.5798864587185447,0.2722228672855927,0.5580419208735096,0.26897039851172444,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_cal,zs_cal,Monocyte,2886.0,0.6776705892452665,0.0044583146627408,0.46700921898693054,0.008454190878772347,0.6700901934408777,0.45935903029453934,0.6784563568958575,0.4601070122095168,0.6779347890557119,0.46405757881212,0.6810650289222838,0.47874617538364483,0.6808065779116012,0.47277629823483197,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_cal,zs_cal,NK cell,2961.0,0.6838166871047162,0.0010790640032600318,0.3820604703254313,0.007430837381120441,0.6830557715051814,0.3803702047106124,0.685526962362364,0.3773308791441838,0.6841901353116157,0.39520724476542285,0.6834190146633922,0.3783970469404255,0.6828915516810276,0.378996976066512,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:lora5,lora5,T cell,3036.0,0.7667199065032084,0.0020175353523342104,0.6642478846482459,0.00575472773178138,0.7690481384688926,0.6690517253195916,0.7641062290164263,0.6594177220037721,0.7653195517623927,0.6627875153592675,0.7681319581250131,0.6714263839210309,0.7669936551433179,0.6585560766375674,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:lora5,lora5,B cell,3187.0,0.6213665799183777,0.008331682934645321,0.4120310124243183,0.011886234896151779,0.6249411415269758,0.41093638849291686,0.6122482861802643,0.40957570193846354,0.6128676069596363,0.40385143208915975,0.6260517318873877,0.40336636382041124,0.6307241330376243,0.4324251757806401,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:lora5,lora5,Monocyte,2886.0,0.691374895361683,0.005308591974398883,0.4626766641236517,0.007554208083574439,0.6841748695396354,0.45767972209130575,0.6954444271987873,0.4701755807008899,0.6952235574812865,0.4656002375292628,0.6871913472178084,0.4520963780628307,0.6948402753708974,0.4678314022339695,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:lora5,lora5,NK cell,2961.0,0.7285297943989862,0.00252803672435112,0.4745164536296736,0.006469473539702936,0.7295360353264104,0.47995618061677353,0.7295477324584406,0.4642674747027603,0.724254489819979,0.47873611699315327,0.7284927851407857,0.4720905139599345,0.7308179292493151,0.47753198187574647,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:scsemi5,scsemi5,T cell,3036.0,0.6257273548560632,0.005050242440445015,0.526294351435585,0.004130507260355439,0.626070108481868,0.5283933756236454,0.6232867199511195,0.5209936990519163,0.6325368811115544,0.5227398480207543,0.6277576564556235,0.5292953290667592,0.6189854082801509,0.53004950541485,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:scsemi5,scsemi5,B cell,3187.0,0.49513970314570155,0.020470364500918336,0.36550925538087536,0.01826221154863732,0.5149033738982487,0.36917393150933697,0.4753277234429045,0.3626722157231738,0.4841970315668504,0.34131939645596165,0.5195148541866612,0.3621154065145236,0.48175553263384285,0.39226532670138087,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:scsemi5,scsemi5,Monocyte,2886.0,0.5994857604545539,0.009002476400729442,0.2523437344597622,0.008571206645144056,0.6049116173498397,0.2486666607003572,0.6103515146335275,0.26404055940495574,0.596401353118678,0.25307123770432843,0.5865597735706083,0.2407334209456319,0.5992045436001162,0.2552067935435376,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:scsemi5,scsemi5,NK cell,2961.0,0.511712726075227,0.01036869436266303,0.3765224846836775,0.005741553235924055,0.4994349928993039,0.38410714589414335,0.5170538919051509,0.3802048487138688,0.5230111773747975,0.37373564261915604,0.5170683777985952,0.37520229049726744,0.5019951903982878,0.36936249569395196,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_raw.npz@f0a2b659,,T cell,3036.0,0.6252492982099395,0.0025733286606634377,0.24146581955771426,0.005185923013070594,0.6221142985016003,0.23838754571795695,0.6236368418813555,0.2337839554911242,0.6271565105807773,0.24493311954099145,0.6248821187349421,0.24462568278772376,0.6284567213510224,0.24559879425077483,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_raw.npz@f0a2b659,,B cell,3187.0,0.5936901450490313,0.014054661680832829,0.3000281320773547,0.013533539994733473,0.6133361017762667,0.3182148317893553,0.5792970260814075,0.28787717718426586,0.5967137359283947,0.3101049876452874,0.5983159718405929,0.2885899607910465,0.5807878896184949,0.29535370297681857,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_raw.npz@f0a2b659,,Monocyte,2886.0,0.6760727421071147,0.004407214996362846,0.4893434962038211,0.0033894096304697345,0.6733712056320289,0.4861995026021561,0.6835608182863449,0.48977623078072885,0.6728456079275176,0.4860913249236192,0.6741323662434962,0.49038580847728097,0.6764537124461856,0.4942646142353203,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_raw.npz@f0a2b659,,NK cell,2961.0,0.6237057159177175,0.0018062818742580874,0.3397912980660963,0.011894321523400782,0.6217386694365884,0.3360102234992736,0.6220023960509978,0.3211605768337862,0.6248064126560452,0.3521378657669166,0.6240506272817141,0.34398513408569226,0.6259304741632421,0.345662690144813,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_pseudo.npz@df955ec1,,T cell,3036.0,0.784224254717026,0.0023248218578767518,0.6692529033220366,0.0029297115815736393,0.7835941736825406,0.6703426350335775,0.7815741209392132,0.6666872507868205,0.7874513007146966,0.6737162924946255,0.782875387162144,0.666715515661895,0.7856262910865358,0.6688028226332647,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_pseudo.npz@df955ec1,,B cell,3187.0,0.7483863793016147,0.009166455196424898,0.5952637434814243,0.015010169967857355,0.7605928879392425,0.6009239960740879,0.7389300945043992,0.59343108615125,0.7452548987011263,0.5923270548801255,0.7552025861120971,0.5741204313210758,0.7419514292512083,0.6155161489805825,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_pseudo.npz@df955ec1,,Monocyte,2886.0,0.6971830282310819,0.004871448341904609,0.4949620983078802,0.004788917961163254,0.702279015791212,0.48919696641888816,0.7010191332586335,0.4996861764571434,0.6977144326017938,0.5001538136720712,0.6903090884847477,0.49344056191328883,0.6945934710190226,0.49233297307800894,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_pseudo.npz@df955ec1,,NK cell,2961.0,0.7397283323430404,0.004574161553748317,0.6328889620581548,0.0043391246393945666,0.7355683088035648,0.6383758427231067,0.7433068900777519,0.6262925620156214,0.7419561386208535,0.6341834984791153,0.7437663144946559,0.6328153928327043,0.7340440097183758,0.6327775142402263,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_cal.npz@96eda824,,T cell,3036.0,0.6851093138019813,0.0030300807319536263,0.4085088235382335,0.006086567697146898,0.6836029287306166,0.40760934991309017,0.6809554492987088,0.3983296818924581,0.6885264265693724,0.4109082081031446,0.6850042445980018,0.41326055463125266,0.687457519813207,0.41243632315122164,,,,,,,,,,,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_cal.npz@96eda824,,B cell,3187.0,0.645951083080109,0.01705926721640451,0.398213081202735,0.013898815656526311,0.6665099471107633,0.41985232162364394,0.6315487260205598,0.39016479118593095,0.6442423015494569,0.4010477977260649,0.6598698432512337,0.3830454032528064,0.6275845974685307,0.3969550922252291,,,,,,,,,,,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_cal.npz@96eda824,,Monocyte,2886.0,0.6838315645180121,0.00510243803392915,0.468960211440807,0.00451863643269516,0.6879323927656573,0.46405112872706017,0.6900162319114721,0.47344823365914174,0.6805244106348138,0.46865627196700205,0.6777168747547515,0.46501715265567234,0.6829679125233652,0.4736282701951589,,,,,,,,,,,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_cal.npz@96eda824,,NK cell,2961.0,0.6613099212410394,0.0033676242669661285,0.44350451245711575,0.008249757916105207,0.657917589306753,0.44470710039607364,0.6629640731163454,0.429385583352398,0.6650032589737835,0.4509628815952915,0.6631222683944061,0.44555465888965456,0.657542416413909,0.44691233805216096,,,,,,,,,,,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_raw.npz@11ba7c4e,,T cell,3036.0,0.6252492982099395,0.0025733286606634377,0.24146581955771426,0.005185923013070594,0.6221142985016003,0.23838754571795695,0.6236368418813555,0.2337839554911242,0.6271565105807773,0.24493311954099145,0.6248821187349421,0.24462568278772376,0.6284567213510224,0.24559879425077483,,,,,,,,,,,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_raw.npz@11ba7c4e,,B cell,3187.0,0.5936901450490313,0.014054661680832829,0.3000281320773547,0.013533539994733473,0.6133361017762667,0.3182148317893553,0.5792970260814075,0.28787717718426586,0.5967137359283947,0.3101049876452874,0.5983159718405929,0.2885899607910465,0.5807878896184949,0.29535370297681857,,,,,,,,,,,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_raw.npz@11ba7c4e,,Monocyte,2886.0,0.6760727421071147,0.004407214996362846,0.4893434962038211,0.0033894096304697345,0.6733712056320289,0.4861995026021561,0.6835608182863449,0.48977623078072885,0.6728456079275176,0.4860913249236192,0.6741323662434962,0.49038580847728097,0.6764537124461856,0.4942646142353203,,,,,,,,,,,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_raw.npz@11ba7c4e,,NK cell,2961.0,0.6237057159177175,0.0018062818742580874,0.3397912980660963,0.011894321523400782,0.6217386694365884,0.3360102234992736,0.6220023960509978,0.3211605768337862,0.6248064126560452,0.3521378657669166,0.6240506272817141,0.34398513408569226,0.6259304741632421,0.345662690144813,,,,,,,,,,,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466
+imperial_eskd,fewshot,fewshot_n5/draw2,split_half_A_vs_B,,mean4,,0.8814001291127382,0.0018555694483643587,0.6903180029733533,0.004992944167221421,0.8831320173975615,0.6964348041784294,0.880745754854865,0.6882127744601525,0.8829266033293957,0.6899109217949244,0.8816187283438393,0.693575837607872,0.87857754163803,0.6834556768253881,0.9352746268080159,0.9668378796067383,0.8103576685103422,0.8988294987201787,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_raw,zs_raw,mean4,,0.6262848962100946,0.003269880524544442,0.4303524048816736,0.0014810078749521287,0.630872583603902,0.4316404721979542,0.6220003872152632,0.42880408571204065,0.6251220950421333,0.4286712500872564,0.6276210738065565,0.43126691073424694,0.6258083413826183,0.4313793056768699,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_pseudo,zs_pseudo,mean4,,0.6520589800245592,0.002206323731285855,0.3302512672904568,0.004625186569262101,0.6548429141286558,0.33171698809670863,0.6493344272726682,0.3223748034719522,0.6515164657749318,0.33465055110191494,0.6536946322715295,0.33120360530046,0.6509064606750106,0.3313103884812484,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:zs_cal,zs_cal,mean4,,0.6556711682003702,0.00421949913467409,0.3641123275203232,0.005824275291656453,0.6598625913254104,0.36513021057177514,0.6492197054366361,0.35481052887774245,0.6576992308716978,0.3708835006121954,0.6577730251753646,0.3656224251207668,0.6538012881927421,0.3641149724191359,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:lora5,lora5,mean4,,0.701997794045564,0.002471949246322995,0.5033680037064724,0.0036601110467626144,0.7019250462154786,0.5044060041301469,0.7003366687134797,0.5008591198364715,0.6994163015058237,0.5027438254927108,0.7024669555927487,0.49974490994105186,0.7058439982002886,0.5090861591319809,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,generated:scsemi5,scsemi5,mean4,,0.5580163861328865,0.004826937147119827,0.380167456489975,0.005447096986303549,0.5613300231573151,0.38258527843187073,0.5565049624831756,0.3819778307234787,0.5590366107929701,0.3727165312000501,0.562725165502872,0.37683661175604555,0.5504851687280994,0.3867210303384301,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_raw.npz@f0a2b659,,mean4,,0.6296794753209507,0.0022005658568556496,0.3426571864762466,0.005782722695488392,0.632640068836621,0.3447030259021855,0.6271242705750264,0.33314948507247627,0.6303805667731837,0.34831682446920365,0.6303452710251863,0.3418966465354359,0.6279071993947363,0.34521995040193165,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:all_usable_pseudo.npz@df955ec1,,mean4,,0.7423804986481907,0.002406752175491213,0.598091926792374,0.004099125804394114,0.7455085965541399,0.5997098600624151,0.7412075596949994,0.5965242688527088,0.7430941926596175,0.6000951648814844,0.7430383440634112,0.5917729754322409,0.7390538002687856,0.6023573647330206,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_cal.npz@96eda824,,mean4,,0.6690504706602854,0.004005096014045154,0.4297966571597229,0.004819664480474257,0.6739907144784476,0.434054975164967,0.6663711200867715,0.4228320725224822,0.6695740994318566,0.43289378984787574,0.6714283077495983,0.4267194423573465,0.663888111554753,0.4324830059059427,,,,,,,,,,,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853
+imperial_eskd,fewshot,fewshot_n5/draw2,broadcast:test_raw.npz@11ba7c4e,,mean4,,0.6296794753209507,0.0022005658568556496,0.3426571864762466,0.005782722695488392,0.632640068836621,0.3447030259021855,0.6271242705750264,0.33314948507247627,0.6303805667731837,0.34831682446920365,0.6303452710251863,0.3418966465354359,0.6279071993947363,0.34521995040193165,,,,,,,,,,,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw2/contrast.csv

@@ -0,0 +1,51 @@
+dataset,design,unit,arm,celltype,statistic,label,n_genes,pearson_r_generated,spearman_r_generated,pearson_r_broadcast,spearman_r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,condition,condition_sha256,pearson_r_generated_scorer,pearson_r_broadcast_scorer,partial_r_generated_given_broadcast_scorer,r_generated_vs_broadcast_scorer
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,T cell,mean_cp10k,"Zero-shot, real bulk",3036.0,0.6332034529425649,0.4464834792324063,0.6311553277299028,0.24633463660290805,0.4514288466409807,0.5342853910851284,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6332034529425649,0.6311553277299028,0.4514288466409807,0.5342853910851284
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,T cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3036.0,0.439838622562335,0.27971013384966176,0.6350373450250355,0.4638614012989848,0.1651370616983124,0.5211793752023158,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.439838622562335,0.6350373450250355,0.1651370616983124,0.5211793752023158
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,B cell,mean_cp10k,"Zero-shot, real bulk",3187.0,0.6140027079885273,0.41873689956877463,0.6245632309702648,0.3313396890869148,0.48238936968037616,0.4420227485885823,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6140027079885273,0.6245632309702648,0.4823893696803761,0.4420227485885823
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,B cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3187.0,0.3580571078828035,0.2591979235569464,0.4816610289030315,0.38778806016965783,0.2191861521545838,0.373431866482714,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.3580571078828035,0.4816610289030315,0.2191861521545838,0.373431866482714
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,Monocyte,mean_cp10k,"Zero-shot, real bulk",2886.0,0.6875508800804067,0.49951182473329503,0.6837051334204964,0.513205280041183,0.4091853101513503,0.6891492405943133,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6875508800804067,0.6837051334204964,0.4091853101513503,0.6891492405943133
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, real bulk",2886.0,0.6320946804590487,0.5247226727440126,0.6802082395314715,0.5387549149279034,0.3525987444390415,0.6360648306295402,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6320946804590487,0.6802082395314715,0.3525987444390415,0.6360648306295402
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,NK cell,mean_cp10k,"Zero-shot, real bulk",2961.0,0.6066856841779714,0.42602808277320114,0.6340215947478178,0.3526865746234074,0.38573080215219624,0.5704771154881487,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6066856841779714,0.6340215947478178,0.3857308021521962,0.5704771154881487
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,NK cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",2961.0,0.39764160783651753,0.29918506865654826,0.5753918871563406,0.43204326809704474,0.1758188382542428,0.47056431870933607,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.3976416078365175,0.5753918871563406,0.1758188382542428,0.470564318709336
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,T cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3036.0,0.6733058462630279,0.24906457824118733,0.7910969798066857,0.6925308509923603,0.36255920397355085,0.6344023631625213,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.6733058462630279,0.7910969798066857,0.3625592039735508,0.6344023631625213
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,T cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3036.0,0.5336855318313993,0.3320512643349295,0.7573459018234742,0.6604525514264218,0.1654430445002221,0.5894433525786136,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.5336855318313993,0.7573459018234742,0.1654430445002221,0.5894433525786136
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,B cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3187.0,0.5898749770826087,0.24327903386675037,0.7751587841920531,0.6306982482687372,0.2732894790624407,0.5794407212088233,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.5898749770826087,0.7751587841920531,0.2732894790624407,0.5794407212088233
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,B cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3187.0,0.4448377970061746,0.36780531852847925,0.4967364530161976,0.44072925503644694,0.3190315099491582,0.37989654165646525,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.4448377970061746,0.4967364530161976,0.3190315099491582,0.3798965416564652
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,Monocyte,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",2886.0,0.6817473811172348,0.5041343469772109,0.7051877596432217,0.5164051153471245,0.37425184803754036,0.6968995287650126,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.6817473811172348,0.7051877596432217,0.3742518480375403,0.6968995287650126
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",2886.0,0.5851347191535485,0.45714751190946096,0.6327650759767827,0.4966690221923296,0.34332738476195407,0.5835299395373842,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.5851347191535485,0.6327650759767827,0.343327384761954,0.5835299395373842
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,NK cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",2961.0,0.7195856075904518,0.3963841945025722,0.7549203676889419,0.6707310517502021,0.5036237033850198,0.6047573202542856,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.7195856075904518,0.7549203676889419,0.5036237033850198,0.6047573202542856
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,NK cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",2961.0,0.4877743410443099,0.33148061993298605,0.7204124094972831,0.6297533880183613,0.21296735085852128,0.49945512742479786,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.4877743410443099,0.7204124094972831,0.2129673508585212,0.4994551274247978
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,T cell,mean_cp10k,Zero-shot + calibration,3036.0,0.6926034260546075,0.34014205813089465,0.6914376940455363,0.4217854456839563,0.44666967506627353,0.6450759174285585,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.6926034260546075,0.6914376940455363,0.4466696750662735,0.6450759174285585
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,T cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3036.0,0.5353326917168032,0.338393934377449,0.6412429356713806,0.4782764565953417,0.2230459296136166,0.626886750651785,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.5353326917168032,0.6412429356713806,0.2230459296136166,0.626886750651785
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,B cell,mean_cp10k,Zero-shot + calibration,3187.0,0.603726020259196,0.3058621385976398,0.6752209109988384,0.4312604904471109,0.3410199073674434,0.5945893233311124,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.603726020259196,0.6752209109988384,0.3410199073674434,0.5945893233311124
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,B cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3187.0,0.4498452707172369,0.3778286543597299,0.48262549791538606,0.38321309589029934,0.2770884523676205,0.49523640010358794,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.4498452707172369,0.482625497915386,0.2770884523676205,0.4952364001035879
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,Monocyte,mean_cp10k,Zero-shot + calibration,2886.0,0.6845481671837349,0.4874930613201557,0.691366841592005,0.4922253551912576,0.42043981080012954,0.6600813912239628,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.6845481671837349,0.691366841592005,0.4204398108001295,0.6600813912239628
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,Monocyte,pseudobulk_log1p_cpm,Zero-shot + calibration,2886.0,0.5879005075587178,0.45724906681636757,0.684975574860617,0.547141970636994,0.3092940063638866,0.5935102583738611,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.5879005075587178,0.684975574860617,0.3092940063638866,0.5935102583738611
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,NK cell,mean_cp10k,Zero-shot + calibration,2961.0,0.6973147328403344,0.39618790584265096,0.6753643592946669,0.4659892316612886,0.46096092974148295,0.6499666951481536,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.6973147328403344,0.6753643592946669,0.4609609297414829,0.6499666951481536
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,NK cell,pseudobulk_log1p_cpm,Zero-shot + calibration,2961.0,0.4749818879332579,0.3344170180027653,0.582176666289871,0.44014241331658216,0.22682351319690675,0.5516554583672265,test_cal.npz@96eda824,96eda8241124439595dc2cf7b56fdf563b54ea702196ac5667062d1b124bf853,0.4749818879332579,0.582176666289871,0.2268235131969067,0.5516554583672265
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,T cell,mean_cp10k,"LoRA, 5 donors",3036.0,0.7743895219281159,0.6887877033929645,0.6311553277299028,0.24633463660290805,0.704182556591567,0.45734673401934,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.7743895219281159,0.6311553277299028,0.704182556591567,0.45734673401934
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,T cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",3036.0,0.6756439652998227,0.5717659550075016,0.6350373450250355,0.4638614012989848,0.5311507905699898,0.507050825942118,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.6756439652998227,0.6350373450250355,0.5311507905699898,0.507050825942118
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,B cell,mean_cp10k,"LoRA, 5 donors",3187.0,0.6421883096352491,0.43535906843267774,0.6245632309702648,0.3313396890869148,0.5336425850820883,0.4238340298732571,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.6421883096352491,0.6245632309702648,0.5336425850820883,0.4238340298732571
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,B cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",3187.0,0.29359070096459816,0.20405514753400011,0.4816610289030315,0.38778806016965783,0.20678547355629068,0.2447446474659733,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.2935907009645981,0.4816610289030315,0.2067854735562906,0.2447446474659733
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,Monocyte,mean_cp10k,"LoRA, 5 donors",2886.0,0.6975675744840075,0.48030610363368137,0.6837051334204964,0.513205280041183,0.4828910819902914,0.613087747747402,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.6975675744840075,0.6837051334204964,0.4828910819902914,0.613087747747402
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,Monocyte,pseudobulk_log1p_cpm,"LoRA, 5 donors",2886.0,0.6001740197549343,0.4904077833594275,0.6802082395314715,0.5387549149279034,0.4073868312538059,0.5028699068075709,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.6001740197549343,0.6802082395314715,0.4073868312538059,0.5028699068075709
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,NK cell,mean_cp10k,"LoRA, 5 donors",2961.0,0.7416729977186952,0.5021823049636277,0.6340215947478178,0.3526865746234074,0.5850326392796552,0.5977284275399235,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.7416729977186952,0.6340215947478178,0.5850326392796552,0.5977284275399235
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,NK cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",2961.0,0.5078604216295737,0.3696358906799594,0.5753918871563406,0.43204326809704474,0.30232184690040514,0.5140228962575366,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.5078604216295737,0.5753918871563406,0.3023218469004051,0.5140228962575366
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,T cell,mean_cp10k,"scSemiProfiler, 5 donors",3036.0,0.6303084207739375,0.5428177749489932,0.6311553277299028,0.24633463660290805,0.575486171136399,0.33137624044505765,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.6303084207739375,0.6311553277299028,0.575486171136399,0.3313762404450576
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,T cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",3036.0,0.356856949420089,0.28788106513096245,0.6350373450250355,0.4638614012989848,0.2713132079444818,0.24169651651795887,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.356856949420089,0.6350373450250355,0.2713132079444818,0.2416965165179588
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,B cell,mean_cp10k,"scSemiProfiler, 5 donors",3187.0,0.49036614830717173,0.35839126856229114,0.6245632309702648,0.3313396890869148,0.394073194357464,0.317941843970975,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.4903661483071717,0.6245632309702648,0.394073194357464,0.317941843970975
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,B cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",3187.0,0.025478153221376126,0.02263251427308507,0.4816610289030315,0.38778806016965783,-0.08059674919730155,0.1966740332907685,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.0254781532213761,0.4816610289030315,-0.0805967491973015,0.1966740332907685
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,Monocyte,mean_cp10k,"scSemiProfiler, 5 donors",2886.0,0.6047453753942459,0.255773573804586,0.6837051334204964,0.513205280041183,0.36554231497527695,0.5617173759440347,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.6047453753942459,0.6837051334204964,0.3655423149752769,0.5617173759440347
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,Monocyte,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",2886.0,0.39128867943202456,0.3339347151552979,0.6802082395314715,0.5387549149279034,0.1594600320663849,0.41923862429931846,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.3912886794320245,0.6802082395314715,0.1594600320663849,0.4192386242993184
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,NK cell,mean_cp10k,"scSemiProfiler, 5 donors",2961.0,0.5241242811116497,0.39459982150108847,0.6340215947478178,0.3526865746234074,0.38874369486241706,0.3900772667930024,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.5241242811116497,0.6340215947478178,0.388743694862417,0.3900772667930024
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,NK cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",2961.0,0.2637650789441471,0.16993407376903952,0.5753918871563406,0.43204326809704474,0.14475695448330875,0.25970820176082243,test_raw.npz@11ba7c4e,11ba7c4e0f734b8eeab115536093d16205a1f592833e54115aa10cafd131e466,0.2637650789441471,0.5753918871563406,0.1447569544833087,0.2597082017608224
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,mean4,mean_cp10k,"Zero-shot, real bulk",,0.6353606812973676,0.4476900715769193,0.6433613217171205,0.3608915450886033,0.4321835821562259,0.5589836239390432,,,0.6353606812973676,0.6433613217171205,0.4321835821562258,0.5589836239390432
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,mean4,pseudobulk_log1p_cpm,"Zero-shot, real bulk",,0.4569080046851762,0.34070394970179224,0.5930746251539698,0.4556119111233977,0.22818519913654514,0.5003100977559766,,,0.4569080046851762,0.5930746251539698,0.22818519913654514,0.5003100977559765
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,mean4,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",,0.6661284530133308,0.3482155383969302,0.7565909728327256,0.6275913165896061,0.3784310586146379,0.6288749833476607,,,0.6661284530133308,0.7565909728327256,0.3784310586146379,0.6288749833476607
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,mean4,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",,0.5128580972588581,0.37212117867646394,0.6518149600784344,0.5569010541683899,0.2601923225174639,0.5130812402993152,,,0.5128580972588581,0.6518149600784344,0.2601923225174639,0.5130812402993152
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,mean4,mean_cp10k,Zero-shot + calibration,,0.6695480865844681,0.3824212909728353,0.6833474514827617,0.45281513074590335,0.41727258074383233,0.6374283317829469,,,0.6695480865844681,0.6833474514827617,0.41727258074383233,0.6374283317829469
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,mean4,pseudobulk_log1p_cpm,Zero-shot + calibration,,0.5120150894815039,0.37697216838907793,0.5977551686843137,0.46219348410980426,0.2590629753855076,0.5668222168741152,,,0.5120150894815039,0.5977551686843137,0.2590629753855076,0.5668222168741152
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,mean4,mean_cp10k,"LoRA, 5 donors",,0.7139546009415169,0.5266587951057378,0.6433613217171205,0.3608915450886033,0.5764372157359006,0.5229992347949807,,,0.7139546009415169,0.6433613217171205,0.5764372157359006,0.5229992347949807
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,mean4,pseudobulk_log1p_cpm,"LoRA, 5 donors",,0.5193172769122323,0.4089661941452222,0.5930746251539698,0.4556119111233977,0.3619112355701229,0.4421720691182997,,,0.5193172769122323,0.5930746251539698,0.36191123557012284,0.4421720691182997
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,mean4,mean_cp10k,"scSemiProfiler, 5 donors",,0.5623860563967511,0.38789560970423964,0.6433613217171205,0.3608915450886033,0.43096134383288925,0.4002781817882674,,,0.5623860563967511,0.6433613217171205,0.43096134383288925,0.4002781817882674
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,mean4,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",,0.2593472152544092,0.2035955920820962,0.5930746251539698,0.4556119111233977,0.12373336132421847,0.2793293439672171,,,0.2593472152544092,0.5930746251539698,0.12373336132421847,0.279329343967217

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw2/deg_limma.csv

@@ -0,0 +1,76 @@
+dataset,design,unit,arm,celltype,method,deg_scored,pred_defined,overlap,overlap_scorer,obs_list_size,gen_list_size,n_sig_obs,n_sig_gen,n_tested_obs,n_tested_gen,G_both,chance_overlap,broadcast_overlap,broadcast_overlap_scorer,broadcast_list_size,n_sig_broadcast,n_tested_broadcast,G_both_broadcast,broadcast_chance_overlap,condition
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,T cell,welch,True,True,28,28.0,50,50,655,1128,5752,4910,4889,0.511352014726938,13,13.0,50,2026,5823,5653,0.4422430567840085,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,B cell,welch,True,True,22,22.0,50,50,240,440,5639,4300,4280,0.5841121495327103,10,10.0,50,2026,5823,5542,0.45110068567304223,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,Monocyte,welch,True,True,24,24.0,50,50,235,1282,5620,4966,4905,0.509683995922528,18,18.0,50,2026,5823,5525,0.45248868778280543,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,NK cell,welch,True,True,19,19.0,50,50,359,809,5582,4449,4428,0.5645889792231256,13,13.0,50,2026,5823,5485,0.45578851412944393,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,DC,welch,True,True,4,4.0,50,50,214,231,5418,4010,3989,0.6267234895963901,11,11.0,50,2026,5823,5325,0.4694835680751174,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,T cell,welch,True,True,27,27.0,50,50,655,622,5752,4772,4761,0.5250997689561017,20,20.0,50,1316,5850,5752,0.43463143254520165,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,B cell,welch,True,True,19,19.0,50,50,240,279,5639,4001,3996,0.6256256256256256,19,19.0,50,1316,5850,5639,0.44334101791097713,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,Monocyte,welch,True,True,24,24.0,50,50,235,577,5620,4284,4275,0.5847953216374269,23,23.0,50,1316,5850,5620,0.44483985765124556,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,NK cell,welch,True,True,20,20.0,50,50,359,292,5582,4126,4121,0.6066488716330988,19,19.0,50,1316,5850,5582,0.44786814761734145,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,DC,welch,True,True,3,3.0,50,50,214,117,5418,3619,3615,0.6915629322268326,22,22.0,50,1316,5850,5418,0.4614248800295312,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,T cell,welch,True,True,27,27.0,50,50,655,1137,5752,4784,4772,0.5238893545683152,17,17.0,50,1940,5823,5653,0.4422430567840085,test_cal.npz@96eda824
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