Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/scsemi/ye2026_sepsis/disease/draw0/adopted_legacy/shards/Skin-S43.json

@@ -0,0 +1,29 @@
+{
+ "sample_id": "Skin-S43",
+ "representative": "Res-S77",
+ "rep_bulk_index": 67,
+ "target_bulk_index": 73,
+ "seed": 20261000,
+ "elapsed_seconds": 150.5425280269992,
+ "device": "cuda:0",
+ "run_signature": "d76aca33242c9d7cccbe1a6b2797b7d861d05e8c19660f9beeb566de73c41585",
+ "code_signature": "06f434c8b833923bedcf3346da7cef48a80720ab161e7cc6515e1554e625ea5e",
+ "shape": [
+  7804,
+  5975
+ ],
+ "dtype": "float32",
+ "nnz": 703759,
+ "zero_fraction": 0.9849072356414155,
+ "zero_rows": 0,
+ "mean_library_normalized": 8330.3046875,
+ "matrix_unit": "normalized_expression",
+ "upstream_npy": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/scsemi_project/inferreddata/Res-S77_to_Skin-S43.npy",
+ "upstream_npy_sha256": "32226b827d997d8c6b63938be4df426bc1ba5e784007fb6b377816d296b58eaf",
+ "shard": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/shards/Skin-S43.npz",
+ "shard_sha256": "94d532b238a4241eecd99c7c31c156f9e60da57a47ee24eb0e473695c9404391",
+ "lossless_csr_verified": true,
+ "upstream_npy_removed": true,
+ "created_at": "2026-09-28T14:34:46.739976+00:00",
+ "complete": true
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/scsemi/ye2026_sepsis/disease/draw0/adopted_legacy/shards/Skin-S46.json

@@ -0,0 +1,29 @@
+{
+ "sample_id": "Skin-S46",
+ "representative": "Res-S77",
+ "rep_bulk_index": 67,
+ "target_bulk_index": 74,
+ "seed": 20261001,
+ "elapsed_seconds": 152.42200957398745,
+ "device": "cuda:0",
+ "run_signature": "d76aca33242c9d7cccbe1a6b2797b7d861d05e8c19660f9beeb566de73c41585",
+ "code_signature": "06f434c8b833923bedcf3346da7cef48a80720ab161e7cc6515e1554e625ea5e",
+ "shape": [
+  7804,
+  5975
+ ],
+ "dtype": "float32",
+ "nnz": 872756,
+ "zero_fraction": 0.981282938263609,
+ "zero_rows": 0,
+ "mean_library_normalized": 8033.1630859375,
+ "matrix_unit": "normalized_expression",
+ "upstream_npy": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/scsemi_project/inferreddata/Res-S77_to_Skin-S46.npy",
+ "upstream_npy_sha256": "2c5f7a950fac9afeaf7016152d1bc728a2115112e3d97dc38aeabae57752857f",
+ "shard": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/shards/Skin-S46.npz",
+ "shard_sha256": "2b5a3568c4710504576cd90ca6417dc8d3d993fa4e18908cef5379105fafa060",
+ "lossless_csr_verified": true,
+ "upstream_npy_removed": true,
+ "created_at": "2026-09-28T14:37:19.570025+00:00",
+ "complete": true
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/scsemi/ye2026_sepsis/disease/draw0/adopted_legacy/shards/Skin-S52.json

@@ -0,0 +1,29 @@
+{
+ "sample_id": "Skin-S52",
+ "representative": "Res-S77",
+ "rep_bulk_index": 67,
+ "target_bulk_index": 75,
+ "seed": 20261002,
+ "elapsed_seconds": 152.8568056859949,
+ "device": "cuda:0",
+ "run_signature": "d76aca33242c9d7cccbe1a6b2797b7d861d05e8c19660f9beeb566de73c41585",
+ "code_signature": "06f434c8b833923bedcf3346da7cef48a80720ab161e7cc6515e1554e625ea5e",
+ "shape": [
+  7804,
+  5975
+ ],
+ "dtype": "float32",
+ "nnz": 536614,
+ "zero_fraction": 0.9884918151618417,
+ "zero_rows": 0,
+ "mean_library_normalized": 8481.2998046875,
+ "matrix_unit": "normalized_expression",
+ "upstream_npy": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/scsemi_project/inferreddata/Res-S77_to_Skin-S52.npy",
+ "upstream_npy_sha256": "13d9fc546bec505f887cebdef925219588995eca6e4b636259d2c3d850839d04",
+ "shard": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/shards/Skin-S52.npz",
+ "shard_sha256": "4e02cb9393bf227425c2fafa146d07afa6ec91dcd29b3309d605076f34bd6708",
+ "lossless_csr_verified": true,
+ "upstream_npy_removed": true,
+ "created_at": "2026-09-28T14:39:52.816703+00:00",
+ "complete": true
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/scsemi/ye2026_sepsis/disease/draw0/adopted_legacy/shards/Uri-S134.json

@@ -0,0 +1,29 @@
+{
+ "sample_id": "Uri-S134",
+ "representative": "HC07",
+ "rep_bulk_index": 24,
+ "target_bulk_index": 77,
+ "seed": 20261004,
+ "elapsed_seconds": 200.36412612898857,
+ "device": "cuda:0",
+ "run_signature": "d76aca33242c9d7cccbe1a6b2797b7d861d05e8c19660f9beeb566de73c41585",
+ "code_signature": "06f434c8b833923bedcf3346da7cef48a80720ab161e7cc6515e1554e625ea5e",
+ "shape": [
+  9812,
+  5975
+ ],
+ "dtype": "float32",
+ "nnz": 1267371,
+ "zero_fraction": 0.9783823582088025,
+ "zero_rows": 0,
+ "mean_library_normalized": 7303.47265625,
+ "matrix_unit": "normalized_expression",
+ "upstream_npy": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/scsemi_project/inferreddata/HC07_to_Uri-S134.npy",
+ "upstream_npy_sha256": "d93eda2e5b7c72b75f96a911778ff325ef650a8d976bbabd435e1fca5b4a735f",
+ "shard": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scsemi/work/ye2026_sepsis/fewshot_n5/draw0/shards/Uri-S134.npz",
+ "shard_sha256": "d78c0a7cbe41f0c85dc0c9ffcf3a3343bebc027b82df140e789bb4488bdf1cd2",
+ "lossless_csr_verified": true,
+ "upstream_npy_removed": true,
+ "created_at": "2026-09-28T14:43:22.587206+00:00",
+ "complete": true
+}