Archive 4 checkpoints (1-4)
Browse files- paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold3/contrast.csv +53 -0
- paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold3/per_donor.csv +65 -0
- paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold3/summary.json +1356 -0
- paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold4/arms/scsemi_n10__raw/deg_top50_lists.csv +63 -0
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold3/contrast.csv
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| 1 |
+
arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
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| 2 |
+
scsemi_n5__raw,T cell,mean_cp10k,3267,0.4507006514098265,0.4054314090999793,0.35974517347399854,0.3526501880531256,13,3,13,3,48746,15181,,,,,,,,,,,
|
| 3 |
+
scsemi_n5__raw,T cell,pseudobulk_log1p_cpm,3267,0.14323057464018318,0.43288100523285106,0.06823239769100144,0.19141458321936727,13,3,13,3,48746,15181,,,,,,,,,,,
|
| 4 |
+
scsemi_n5__raw,B cell,mean_cp10k,3235,0.37090193325084925,0.28791499229461276,0.3109892576073328,0.3021899070636693,13,3,13,3,20084,3154,,,,,,,,,,,
|
| 5 |
+
scsemi_n5__raw,B cell,pseudobulk_log1p_cpm,3235,0.08005792067309182,0.22618496973249358,0.06090500209756478,0.0927880035080931,13,3,13,3,20084,3154,,,,,,,,,,,
|
| 6 |
+
scsemi_n5__raw,Monocyte,mean_cp10k,3323,0.2676398330486358,0.42584414362557405,0.18318190269913762,0.25182681606544294,13,3,13,3,19536,3134,,,,,,,,,,,
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| 7 |
+
scsemi_n5__raw,Monocyte,pseudobulk_log1p_cpm,3323,-0.05036745263499858,0.49229818193386826,-0.10542183252331752,0.08343432840108057,13,3,13,3,19536,3134,,,,,,,,,,,
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| 8 |
+
scsemi_n5__raw,NK cell,mean_cp10k,3307,0.35750930496934,0.3851833932466608,0.2571030783977026,0.35147537498543635,13,3,13,3,7787,1116,,,,,,,,,,,
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| 9 |
+
scsemi_n5__raw,NK cell,pseudobulk_log1p_cpm,3307,0.11123510236017743,0.2648524879635766,0.06836379952307392,0.17492394644423018,13,3,13,3,7787,1116,,,,,,,,,,,
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| 10 |
+
scsemi_n5__raw,T cell,welch_top50_deg,5975,,,,,13,3,13,3,48746,15181,True,0,0.0,50,0,97,0,0,0.0,0,0
|
| 11 |
+
scsemi_n5__raw,B cell,welch_top50_deg,5975,,,,,13,3,13,3,20084,3154,True,0,0.0,50,0,122,0,0,0.0,0,0
|
| 12 |
+
scsemi_n5__raw,Monocyte,welch_top50_deg,5975,,,,,13,3,13,3,19536,3134,True,0,0.0,5,0,5,0,0,0.0,0,0
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| 13 |
+
scsemi_n5__raw,NK cell,welch_top50_deg,5975,,,,,13,3,13,3,7787,1116,True,0,0.0,30,0,30,0,0,0.0,0,0
|
| 14 |
+
scsemi_n5__raw,DC,welch_top50_deg,5975,,,,,12,3,13,3,284,272,True,0,0.0,50,0,63,0,0,0.0,0,0
|
| 15 |
+
scsemi_n10__raw,T cell,mean_cp10k,3267,0.4181803303780781,0.4054314090999793,0.3075259366735005,0.3942194521139218,13,3,13,3,48746,16003,,,,,,,,,,,
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| 16 |
+
scsemi_n10__raw,T cell,pseudobulk_log1p_cpm,3267,0.2140474109800964,0.43288100523285106,0.13228907194061443,0.22612228916035582,13,3,13,3,48746,16003,,,,,,,,,,,
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| 17 |
+
scsemi_n10__raw,B cell,mean_cp10k,3235,0.4590264551589571,0.28791499229461276,0.4002492191934191,0.34451327647050767,13,3,13,3,20084,3278,,,,,,,,,,,
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| 18 |
+
scsemi_n10__raw,B cell,pseudobulk_log1p_cpm,3235,0.1571006803083457,0.22618496973249358,0.1324720170043179,0.12881887572761314,13,3,13,3,20084,3278,,,,,,,,,,,
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| 19 |
+
scsemi_n10__raw,Monocyte,mean_cp10k,3323,0.42541654201021734,0.42584414362557405,0.3372899290237061,0.32004556611322116,13,3,11,3,19536,2623,,,,,,,,,,,
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| 20 |
+
scsemi_n10__raw,Monocyte,pseudobulk_log1p_cpm,3323,0.15871076369121775,0.49229818193386826,0.09423892013358275,0.15785377407436058,13,3,11,3,19536,2623,,,,,,,,,,,
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| 21 |
+
scsemi_n10__raw,NK cell,mean_cp10k,3307,0.3614289392453883,0.3851833932466608,0.27632726636191607,0.3086060408821277,13,3,12,3,7787,873,,,,,,,,,,,
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| 22 |
+
scsemi_n10__raw,NK cell,pseudobulk_log1p_cpm,3307,0.13186026212563784,0.2648524879635766,0.10538583037734166,0.116794700660289,13,3,12,3,7787,873,,,,,,,,,,,
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| 23 |
+
scsemi_n10__raw,T cell,welch_top50_deg,5975,,,,,13,3,13,3,48746,16003,True,0,0.0,50,0,97,0,0,0.0,0,0
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| 24 |
+
scsemi_n10__raw,B cell,welch_top50_deg,5975,,,,,13,3,13,3,20084,3278,True,0,0.0,50,0,122,0,0,0.0,0,0
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| 25 |
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scsemi_n10__raw,Monocyte,welch_top50_deg,5975,,,,,13,3,11,3,19536,2623,True,0,0.0,5,0,5,0,0,0.0,0,0
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| 26 |
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scsemi_n10__raw,NK cell,welch_top50_deg,5975,,,,,13,3,12,3,7787,873,True,0,0.0,30,0,30,0,0,0.0,0,0
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| 27 |
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scsemi_n10__raw,DC,welch_top50_deg,5975,,,,,12,3,12,3,284,288,True,0,0.0,50,1,63,1,0,0.0,0,0
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| 28 |
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scsemi_n20__raw,T cell,mean_cp10k,3267,0.2778325810033801,0.4054314090999793,0.12902600389510394,0.42146149323532883,13,3,13,3,48746,13809,,,,,,,,,,,
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| 29 |
+
scsemi_n20__raw,T cell,pseudobulk_log1p_cpm,3267,0.05894854330112031,0.43288100523285106,-0.042880787824875845,0.2232209954998953,13,3,13,3,48746,13809,,,,,,,,,,,
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| 30 |
+
scsemi_n20__raw,B cell,mean_cp10k,3235,0.34883384951989704,0.28791499229461276,0.26894213926509025,0.38658522209185203,13,3,13,3,20084,3876,,,,,,,,,,,
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| 31 |
+
scsemi_n20__raw,B cell,pseudobulk_log1p_cpm,3235,0.08489907389508387,0.22618496973249358,0.053251876404767994,0.14856373355653127,13,3,13,3,20084,3876,,,,,,,,,,,
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| 32 |
+
scsemi_n20__raw,Monocyte,mean_cp10k,3323,0.29240759537525,0.42584414362557405,0.1682042511050993,0.35216287130170026,13,3,12,3,19536,3728,,,,,,,,,,,
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| 33 |
+
scsemi_n20__raw,Monocyte,pseudobulk_log1p_cpm,3323,0.10726199609881307,0.49229818193386826,-0.018828157762670855,0.25011192919017056,13,3,12,3,19536,3728,,,,,,,,,,,
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| 34 |
+
scsemi_n20__raw,NK cell,mean_cp10k,3307,0.3437414609959126,0.3851833932466608,0.258576979627637,0.3017829246474652,13,3,12,2,7787,800,,,,,,,,,,,
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| 35 |
+
scsemi_n20__raw,NK cell,pseudobulk_log1p_cpm,3307,0.07466422239678668,0.2648524879635766,0.04498988577029098,0.11927651953815117,13,3,12,2,7787,800,,,,,,,,,,,
|
| 36 |
+
scsemi_n20__raw,T cell,welch_top50_deg,5975,,,,,13,3,13,3,48746,13809,True,0,0.0,50,0,97,0,0,0.0,0,0
|
| 37 |
+
scsemi_n20__raw,B cell,welch_top50_deg,5975,,,,,13,3,13,3,20084,3876,True,0,0.0,50,0,122,0,0,0.0,0,0
|
| 38 |
+
scsemi_n20__raw,Monocyte,welch_top50_deg,5975,,,,,13,3,12,3,19536,3728,True,0,0.0,5,0,5,0,0,0.0,0,0
|
| 39 |
+
scsemi_n20__raw,NK cell,welch_top50_deg,5975,,,,,13,3,12,2,7787,800,True,0,0.0,30,7,30,7,0,0.0,0,0
|
| 40 |
+
scsemi_n20__raw,DC,welch_top50_deg,5975,,,,,12,3,12,3,284,365,True,0,0.0,50,0,63,0,0,0.0,0,0
|
| 41 |
+
scsemi_n40__raw,T cell,mean_cp10k,3267,0.03832605640571333,0.4054314090999793,-0.13807979039876855,0.3822209436574146,13,3,13,3,48746,13136,,,,,,,,,,,
|
| 42 |
+
scsemi_n40__raw,T cell,pseudobulk_log1p_cpm,3267,-0.024785827282428112,0.43288100523285106,-0.13693576840217628,0.22086143349863796,13,3,13,3,48746,13136,,,,,,,,,,,
|
| 43 |
+
scsemi_n40__raw,B cell,mean_cp10k,3235,0.18414552018781413,0.28791499229461276,0.07077561687305799,0.4266750053251736,13,3,13,3,20084,2898,,,,,,,,,,,
|
| 44 |
+
scsemi_n40__raw,B cell,pseudobulk_log1p_cpm,3235,0.0392334841273884,0.22618496973249358,-0.01914033061884717,0.2532008775851202,13,3,13,3,20084,2898,,,,,,,,,,,
|
| 45 |
+
scsemi_n40__raw,Monocyte,mean_cp10k,3323,0.11939204680423794,0.42584414362557405,-0.03635914953913322,0.35265511906227,13,3,13,3,19536,4887,,,,,,,,,,,
|
| 46 |
+
scsemi_n40__raw,Monocyte,pseudobulk_log1p_cpm,3323,0.0694834365015101,0.49229818193386826,-0.09165125887576528,0.29593028618103817,13,3,13,3,19536,4887,,,,,,,,,,,
|
| 47 |
+
scsemi_n40__raw,NK cell,mean_cp10k,3307,0.4051314266580224,0.3851833932466608,0.3170364823773802,0.33651835775544264,13,3,13,2,7787,848,,,,,,,,,,,
|
| 48 |
+
scsemi_n40__raw,NK cell,pseudobulk_log1p_cpm,3307,0.09791071691880611,0.2648524879635766,0.06522846208931166,0.13434589328532184,13,3,13,2,7787,848,,,,,,,,,,,
|
| 49 |
+
scsemi_n40__raw,T cell,welch_top50_deg,5975,,,,,13,3,13,3,48746,13136,True,0,0.0,50,0,97,0,0,0.0,0,0
|
| 50 |
+
scsemi_n40__raw,B cell,welch_top50_deg,5975,,,,,13,3,13,3,20084,2898,True,0,0.0,50,0,122,0,0,0.0,0,0
|
| 51 |
+
scsemi_n40__raw,Monocyte,welch_top50_deg,5975,,,,,13,3,13,3,19536,4887,True,0,0.0,5,2,5,2,0,0.0,0,0
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| 52 |
+
scsemi_n40__raw,NK cell,welch_top50_deg,5975,,,,,13,3,13,2,7787,848,True,0,0.0,30,12,30,12,0,0.0,0,0
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| 53 |
+
scsemi_n40__raw,DC,welch_top50_deg,5975,,,,,12,3,12,3,284,441,True,0,0.0,50,1,63,1,0,0.0,0,0
|
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold3/per_donor.csv
ADDED
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| 1 |
+
arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
|
| 2 |
+
scsemi_n5__raw,Abd-S102,adult_sepsis,1500,9512,150,0.8493333333333334,0.47981497056349875,0.01,0.39318755256518084,0.019333333333333334,0.0053616484440706475,0.08,0.095878889823381,0.002,0.0007359125315391085,0.03933333333333333,0.02502102607232969,0.7981328847771237,0.5809371755543881,0.5754683924251346,5,False,0.9133333333333333,0.13333333333333333,0.6,0.36666666666666664,1.9333333333333333,0.5361648444070648,1823.0,1646.0
|
| 3 |
+
scsemi_n5__raw,Abd-S103,adult_sepsis,1500,9423,150,0.7233333333333334,0.4813753581661891,0.23933333333333334,0.14782977820227103,0.0006666666666666666,0.0024408362517245037,0.018666666666666668,0.04393505253104107,0.0026666666666666666,0.00021224663058473945,0.015333333333333332,0.3242067282181895,0.6718319006685769,0.6326678068482368,0.6805841431844334,1,True,0.9733333333333334,0.4666666666666667,0.6266666666666667,0.5266666666666666,0.06666666666666667,0.24408362517245036,1820.0,971.0
|
| 4 |
+
scsemi_n5__raw,Abd-S51,adult_sepsis,1500,6865,150,0.312,0.25273124544792425,0.082,0.269482884195193,0.49,0.3551347414420976,0.02666666666666667,0.03670793882010197,0.01,0.0014566642388929353,0.07933333333333334,0.08448652585579024,0.40535469774217037,0.49873446759411355,0.5656905459193124,3,False,1.0,0.15333333333333332,0.8133333333333334,0.4666666666666667,49.0,35.51347414420976,1820.0,1849.0
|
| 5 |
+
scsemi_n5__raw,Abd-S83,adult_sepsis,1500,6209,150,0.816,0.3924947656627476,0.006666666666666667,0.16991464003865356,0.020666666666666667,0.049927524561120956,0.08266666666666667,0.3013367692059913,0.0026666666666666666,0.0009663391850539539,0.07133333333333333,0.0853599613464326,0.8504111236377302,0.5160252489243918,0.5859229980489643,5,False,0.5666666666666667,0.14666666666666667,0.29333333333333333,0.31333333333333335,2.0666666666666664,4.992752456112096,1822.0,1649.0
|
| 6 |
+
scsemi_n5__raw,HC12,adult_HC,1500,3720,150,0.646,0.5456989247311828,0.054,0.05725806451612903,0.13333333333333333,0.14623655913978495,0.11133333333333334,0.2196236559139785,0.02266666666666667,0.008870967741935484,0.03266666666666666,0.022311827956989248,0.24890322580645166,0.5323006254835988,0.6344429078320754,9,False,0.96,0.06666666666666667,0.52,0.32666666666666666,13.333333333333334,14.623655913978496,1822.0,2457.5
|
| 7 |
+
scsemi_n5__raw,IC22,adult_ICU_ctrl,1500,2107,150,0.8806666666666667,0.16753678215472234,0.009333333333333334,0.01613668723303275,0.011333333333333334,0.722828666350261,0.076,0.019933554817275746,0.002,0.04129093497864262,0.020666666666666667,0.0322733744660655,1.5383926593893371,1.1255936603700172,0.5716267695914091,11,False,0.8866666666666667,0.04,0.5666666666666667,0.29333333333333333,1.1333333333333333,72.2828666350261,1822.0,3217.0
|
| 8 |
+
scsemi_n5__raw,PIC01,ped_ICU_ctrl,1500,8345,150,0.716,0.647813061713601,0.10733333333333334,0.07070101857399641,0.054,0.12055122828040743,0.044,0.11024565608148593,0.022,0.004313960455362493,0.056666666666666664,0.04637507489514679,0.26559376872378665,0.5079475218536647,0.5925775406886711,10,False,0.9666666666666667,0.08666666666666667,0.5066666666666667,0.3,5.4,12.055122828040743,1821.5,2157.0
|
| 9 |
+
scsemi_n5__raw,Res-PS02,ped_sepsis,1500,6473,150,0.306,0.5892167464854009,0.6566666666666666,0.33848292909006644,0.0026666666666666666,0.012050054070755446,0.026,0.05051753437355168,0.006,0.0,0.0026666666666666666,0.009732735980225553,0.6483674751532004,0.6592152399467534,0.7617833052194503,2,False,0.8533333333333334,0.16,0.6266666666666667,0.2733333333333333,0.26666666666666666,1.2050054070755445,1823.0,1680.0
|
| 10 |
+
scsemi_n5__raw,Res-PS16,ped_sepsis,1500,7403,150,0.41333333333333333,0.4078076455491017,0.436,0.5172227475347831,0.08733333333333333,0.0009455626097528029,0.006666666666666667,0.017695528839659597,0.01,0.00013508037282182898,0.04666666666666667,0.05619343509388086,0.2035567562699806,0.7266430987733835,0.5611159258198432,15,False,1.0,0.24,0.9533333333333334,0.41333333333333333,8.733333333333333,0.09455626097528029,1819.0,1895.0
|
| 11 |
+
scsemi_n5__raw,Res-PS21,ped_sepsis,1500,6455,150,0.8813333333333333,0.2689388071262587,0.08666666666666667,0.19550735863671573,0.008666666666666666,0.339426800929512,0.015333333333333332,0.06893880712625872,0.0006666666666666666,0.002168861347792409,0.007333333333333333,0.12501936483346243,1.2247890524141494,0.3938797964615466,0.5491487698404381,13,False,1.0,0.15333333333333332,0.8466666666666667,0.38,0.8666666666666666,33.9426800929512,1822.0,1720.0
|
| 12 |
+
scsemi_n5__raw,Res-S125,adult_sepsis,1500,3975,150,0.5186666666666667,0.510188679245283,0.13266666666666665,0.24125786163522012,0.116,0.14440251572327045,0.03133333333333333,0.0810062893081761,0.030666666666666665,0.0015094339622641509,0.17066666666666666,0.021635220125786163,0.3733333333333334,0.28988953232584097,0.5343280424763404,3,False,1.0,0.08,0.68,0.32,11.600000000000001,14.440251572327046,1822.0,1933.0
|
| 13 |
+
scsemi_n5__raw,Res-S136,adult_sepsis,1500,2882,150,0.31733333333333336,0.3650242886884108,0.07333333333333333,0.04996530187369882,0.5113333333333333,0.4961832061068702,0.03,0.034004163775156145,0.012,0.004857737682165163,0.056,0.04996530187369882,0.1033902382604672,0.5643591909516315,0.6174114213003242,1,True,0.9933333333333333,0.04,0.76,0.38666666666666666,51.13333333333333,49.61832061068702,1821.0,3386.0
|
| 14 |
+
scsemi_n5__raw,Res-S149,adult_sepsis,1500,7304,150,0.312,0.37089266155531214,0.06733333333333333,0.10282037239868565,0.5026666666666667,0.40963855421686746,0.04,0.06489594742606791,0.017333333333333333,0.003696604600219058,0.06066666666666667,0.04805585980284775,0.23855129609346482,0.37943529483069355,0.6404066450633925,1,True,0.9933333333333333,0.13333333333333333,0.64,0.35333333333333333,50.26666666666667,40.963855421686745,1822.0,2356.0
|
| 15 |
+
scsemi_n5__raw,Skin-S38,adult_sepsis,1500,9976,150,0.6093333333333333,0.8330994386527666,0.124,0.13572574178027266,0.11266666666666666,0.00020048115477145148,0.058666666666666666,0.02475942261427426,0.028666666666666667,0.00020048115477145148,0.06666666666666667,0.006014434643143544,0.47098369419941194,0.8341668304791459,0.572852670969137,15,False,0.9466666666666667,0.08,0.54,0.20666666666666667,11.266666666666666,0.020048115477145148,1823.0,1675.0
|
| 16 |
+
scsemi_n5__raw,Uri-S134,adult_sepsis,1500,9030,150,0.9106666666666666,0.3501661129568106,0.007333333333333333,0.038981173864894796,0.008666666666666666,0.5069767441860465,0.054,0.037541528239202655,0.005333333333333333,0.0035437430786267998,0.014,0.06279069767441861,1.1574972314507197,0.5870901000982757,0.5206887083175212,12,False,0.8133333333333334,0.16,0.5933333333333334,0.37333333333333335,0.8666666666666666,50.697674418604656,1821.0,2577.0
|
| 17 |
+
scsemi_n5__raw,Uri-S20,adult_sepsis,1500,4516,150,0.9086666666666666,0.41054030115146145,0.01,0.0812666076173605,0.01,0.3961470327723649,0.042666666666666665,0.03897254207263064,0.006666666666666667,0.001550044286979628,0.022,0.07152347209920283,1.0138742249778565,0.36044145076903955,0.5520105594093614,9,False,0.8733333333333333,0.1,0.5266666666666666,0.5133333333333333,1.0,39.614703277236494,1820.0,4883.5
|
| 18 |
+
scsemi_n10__raw,Abd-S102,adult_sepsis,1500,9512,150,0.8906666666666667,0.47981497056349875,0.06466666666666666,0.39318755256518084,0.0,0.0053616484440706475,0.0,0.095878889823381,0.0,0.0007359125315391085,0.04466666666666667,0.02502102607232969,0.8609946733950098,0.5809371755543881,0.48898220042379714,1,True,0.9933333333333333,0.13333333333333333,0.8133333333333334,0.25333333333333335,0.0,0.5361648444070648,1926.0,1646.0
|
| 19 |
+
scsemi_n10__raw,Abd-S103,adult_sepsis,1500,9423,150,0.7233333333333334,0.4813753581661891,0.238,0.14782977820227103,0.0,0.0024408362517245037,0.018,0.04393505253104107,0.0033333333333333335,0.00021224663058473945,0.017333333333333333,0.3242067282181895,0.6704985673352436,0.6326678068482368,0.6805841421476356,1,True,0.9666666666666667,0.44,0.4866666666666667,0.5066666666666667,0.0,0.24408362517245036,1925.0,971.0
|
| 20 |
+
scsemi_n10__raw,Abd-S51,adult_sepsis,1500,6865,150,0.31,0.25273124544792425,0.08333333333333333,0.269482884195193,0.49266666666666664,0.3551347414420976,0.027333333333333334,0.03670793882010197,0.009333333333333334,0.0014566642388929353,0.07733333333333334,0.08448652585579024,0.4053546977421704,0.49873446759411355,0.5656905453609258,3,False,1.0,0.15333333333333332,0.7933333333333333,0.44666666666666666,49.266666666666666,35.51347414420976,1927.0,1849.0
|
| 21 |
+
scsemi_n10__raw,Abd-S83,adult_sepsis,1500,6209,150,0.8553333333333333,0.3924947656627476,0.084,0.16991464003865356,0.005333333333333333,0.049927524561120956,0.005333333333333333,0.3013367692059913,0.004,0.0009663391850539539,0.046,0.0853599613464326,0.9317444569710635,0.5160252489243918,0.5446875060982126,3,False,0.9466666666666667,0.14666666666666667,0.32666666666666666,0.3466666666666667,0.5333333333333333,4.992752456112096,1927.0,1649.0
|
| 22 |
+
scsemi_n10__raw,HC12,adult_HC,1500,3720,150,0.6406666666666667,0.5456989247311828,0.05466666666666667,0.05725806451612903,0.13533333333333333,0.14623655913978495,0.11333333333333333,0.2196236559139785,0.02266666666666667,0.008870967741935484,0.03333333333333333,0.022311827956989248,0.23956989247311838,0.5323006254835988,0.6376698283058263,9,False,0.9666666666666667,0.06666666666666667,0.44,0.25333333333333335,13.533333333333333,14.623655913978496,1928.0,2457.5
|
| 23 |
+
scsemi_n10__raw,IC22,adult_ICU_ctrl,1500,2107,150,0.8673333333333333,0.16753678215472234,0.11333333333333333,0.01613668723303275,0.004666666666666667,0.722828666350261,0.0013333333333333333,0.019933554817275746,0.004666666666666667,0.04129093497864262,0.008666666666666666,0.0322733744660655,1.5939863945578232,1.1255936603700172,0.4945960896526215,16,False,0.9666666666666667,0.04,0.34,0.2866666666666667,0.46666666666666673,72.2828666350261,1923.0,3217.0
|
| 24 |
+
scsemi_n10__raw,PIC01,ped_ICU_ctrl,1500,8345,150,0.6786666666666666,0.647813061713601,0.15933333333333333,0.07070101857399641,0.05733333333333333,0.12055122828040743,0.07533333333333334,0.11024565608148593,0.014666666666666666,0.004313960455362493,0.014666666666666666,0.04637507489514679,0.2596772518474136,0.5079475218536647,0.577328798423578,11,False,0.9866666666666667,0.08,0.6866666666666666,0.22666666666666666,5.733333333333333,12.055122828040743,1926.0,2157.0
|
| 25 |
+
scsemi_n10__raw,Res-PS02,ped_sepsis,1500,6473,150,0.30266666666666664,0.5892167464854009,0.6626666666666666,0.33848292909006644,0.0033333333333333335,0.012050054070755446,0.026,0.05051753437355168,0.0026666666666666666,0.0,0.0026666666666666666,0.009732735980225553,0.6537008084865339,0.6592152399467534,0.7603545783500527,2,False,0.8666666666666667,0.15333333333333332,0.44666666666666666,0.34,0.33333333333333337,1.2050054070755445,1924.0,1680.0
|
| 26 |
+
scsemi_n10__raw,Res-PS16,ped_sepsis,1500,7403,150,0.6893333333333334,0.4078076455491017,0.18333333333333332,0.5172227475347831,0.042,0.0009455626097528029,0.054,0.017695528839659597,0.026,0.00013508037282182898,0.005333333333333333,0.05619343509388086,0.7694990319239948,0.7266430987733835,0.5997706749793524,16,False,0.9933333333333333,0.24,0.8,0.4666666666666667,4.2,0.09455626097528029,1923.0,1895.0
|
| 27 |
+
scsemi_n10__raw,Res-PS21,ped_sepsis,1500,6455,150,0.8873333333333333,0.2689388071262587,0.08533333333333333,0.19550735863671573,0.008666666666666666,0.339426800929512,0.013333333333333334,0.06893880712625872,0.0006666666666666666,0.002168861347792409,0.004666666666666667,0.12501936483346243,1.2367890524141494,0.3938797964615466,0.5472355960842302,13,False,1.0,0.14666666666666667,0.7533333333333333,0.3,0.8666666666666666,33.9426800929512,1926.0,1720.0
|
| 28 |
+
scsemi_n10__raw,Res-S125,adult_sepsis,1500,3975,150,0.5193333333333333,0.510188679245283,0.138,0.24125786163522012,0.12266666666666666,0.14440251572327045,0.028,0.0810062893081761,0.036,0.0015094339622641509,0.156,0.021635220125786163,0.356,0.28988953232584097,0.5338716651646369,3,False,1.0,0.08,0.5266666666666666,0.23333333333333334,12.266666666666666,14.440251572327046,1927.0,1933.0
|
| 29 |
+
scsemi_n10__raw,Res-S136,adult_sepsis,1500,2882,150,0.318,0.3650242886884108,0.074,0.04996530187369882,0.5113333333333333,0.4961832061068702,0.027333333333333334,0.034004163775156145,0.012,0.004857737682165163,0.05733333333333333,0.04996530187369882,0.10739023826046723,0.5643591909516315,0.6176854034924333,1,True,0.9933333333333333,0.04,0.7,0.4,51.13333333333333,49.61832061068702,1924.0,3386.0
|
| 30 |
+
scsemi_n10__raw,Res-S149,adult_sepsis,1500,7304,150,0.5673333333333334,0.37089266155531214,0.10133333333333333,0.10282037239868565,0.22666666666666666,0.40963855421686746,0.034666666666666665,0.06489594742606791,0.012666666666666666,0.003696604600219058,0.05733333333333333,0.04805585980284775,0.4293764147499088,0.37943529483069355,0.6980983598410555,1,True,0.9466666666666667,0.14666666666666667,0.43333333333333335,0.3,22.666666666666664,40.963855421686745,1924.0,2356.0
|
| 31 |
+
scsemi_n10__raw,Skin-S38,adult_sepsis,1500,9976,150,0.6066666666666667,0.8330994386527666,0.126,0.13572574178027266,0.116,0.00020048115477145148,0.056666666666666664,0.02475942261427426,0.03333333333333333,0.00020048115477145148,0.06133333333333333,0.006014434643143544,0.47231702753274524,0.8341668304791459,0.574149110677635,15,False,0.9466666666666667,0.10666666666666667,0.36666666666666664,0.24,11.600000000000001,0.020048115477145148,1924.0,1675.0
|
| 32 |
+
scsemi_n10__raw,Uri-S134,adult_sepsis,1500,9030,150,0.9073333333333333,0.3501661129568106,0.007333333333333333,0.038981173864894796,0.010666666666666666,0.5069767441860465,0.056,0.037541528239202655,0.005333333333333333,0.0035437430786267998,0.013333333333333334,0.06279069767441861,1.1548305647840533,0.5870901000982757,0.521699944924727,12,False,0.8466666666666667,0.17333333333333334,0.26,0.35333333333333333,1.0666666666666667,50.697674418604656,1929.0,2577.0
|
| 33 |
+
scsemi_n10__raw,Uri-S20,adult_sepsis,1500,4516,150,0.9046666666666666,0.41054030115146145,0.01,0.0812666076173605,0.012,0.3961470327723649,0.04533333333333334,0.03897254207263064,0.004666666666666667,0.001550044286979628,0.023333333333333334,0.07152347209920283,1.0072075583111897,0.36044145076903955,0.5518406022394416,9,False,0.88,0.08,0.21333333333333335,0.4066666666666667,1.2,39.614703277236494,1924.0,4883.5
|
| 34 |
+
scsemi_n20__raw,Abd-S102,adult_sepsis,1500,9512,150,0.8806666666666667,0.47981497056349875,0.066,0.39318755256518084,0.0,0.0053616484440706475,0.0,0.095878889823381,0.0,0.0007359125315391085,0.05333333333333334,0.02502102607232969,0.8583280067283432,0.5809371755543881,0.48857235972138785,1,True,1.0,0.12,0.78,0.25333333333333335,0.0,0.5361648444070648,1939.0,1646.0
|
| 35 |
+
scsemi_n20__raw,Abd-S103,adult_sepsis,1500,9423,150,0.37266666666666665,0.4813753581661891,0.47533333333333333,0.14782977820227103,0.066,0.0024408362517245037,0.05533333333333333,0.04393505253104107,0.0033333333333333335,0.00021224663058473945,0.027333333333333334,0.3242067282181895,0.8111641727687573,0.6326678068482368,0.6500601926366136,2,False,0.94,0.49333333333333335,0.6933333333333334,0.6,6.6000000000000005,0.24408362517245036,1938.5,971.0
|
| 36 |
+
scsemi_n20__raw,Abd-S51,adult_sepsis,1500,6865,150,0.31533333333333335,0.25273124544792425,0.08333333333333333,0.269482884195193,0.49133333333333334,0.3551347414420976,0.02666666666666667,0.03670793882010197,0.014,0.0014566642388929353,0.06933333333333333,0.08448652585579024,0.4226880310755038,0.49873446759411355,0.5700818848834722,3,False,1.0,0.16,0.7666666666666667,0.47333333333333333,49.13333333333333,35.51347414420976,1938.0,1849.0
|
| 37 |
+
scsemi_n20__raw,Abd-S83,adult_sepsis,1500,6209,150,0.8586666666666667,0.3924947656627476,0.08266666666666667,0.16991464003865356,0.005333333333333333,0.049927524561120956,0.005333333333333333,0.3013367692059913,0.0033333333333333335,0.0009663391850539539,0.04466666666666667,0.0853599613464326,0.9370777903043969,0.5160252489243918,0.5451546835110449,3,False,0.9266666666666666,0.15333333333333332,0.30666666666666664,0.38666666666666666,0.5333333333333333,4.992752456112096,1939.0,1649.0
|
| 38 |
+
scsemi_n20__raw,HC12,adult_HC,1500,3720,150,0.6466666666666666,0.5456989247311828,0.05333333333333334,0.05725806451612903,0.13333333333333333,0.14623655913978495,0.11,0.2196236559139785,0.02266666666666667,0.008870967741935484,0.034,0.022311827956989248,0.2529032258064516,0.5323006254835988,0.6358884501092548,9,False,0.9666666666666667,0.05333333333333334,0.47333333333333333,0.30666666666666664,13.333333333333334,14.623655913978496,1941.0,2457.5
|
| 39 |
+
scsemi_n20__raw,IC22,adult_ICU_ctrl,1500,2107,150,0.8666666666666667,0.16753678215472234,0.116,0.01613668723303275,0.005333333333333333,0.722828666350261,0.0,0.019933554817275746,0.005333333333333333,0.04129093497864262,0.006666666666666667,0.0322733744660655,1.5979863945578232,1.1255936603700172,0.4952209269970693,16,False,0.9733333333333334,0.05333333333333334,0.25333333333333335,0.26666666666666666,0.5333333333333333,72.2828666350261,1938.0,3217.0
|
| 40 |
+
scsemi_n20__raw,PIC01,ped_ICU_ctrl,1500,8345,150,0.6806666666666666,0.647813061713601,0.15666666666666668,0.07070101857399641,0.05733333333333333,0.12055122828040743,0.076,0.11024565608148593,0.014666666666666666,0.004313960455362493,0.014666666666666666,0.04637507489514679,0.2583439185140803,0.5079475218536647,0.5774077659827885,11,False,0.98,0.08,0.6733333333333333,0.2733333333333333,5.733333333333333,12.055122828040743,1939.0,2157.0
|
| 41 |
+
scsemi_n20__raw,Res-PS02,ped_sepsis,1500,6473,150,0.308,0.5892167464854009,0.6546666666666666,0.33848292909006644,0.0026666666666666666,0.012050054070755446,0.026,0.05051753437355168,0.005333333333333333,0.0,0.0033333333333333335,0.009732735980225553,0.643034141819867,0.6592152399467534,0.7608051672701085,2,False,0.8733333333333333,0.15333333333333332,0.44666666666666666,0.31333333333333335,0.26666666666666666,1.2050054070755445,1937.0,1680.0
|
| 42 |
+
scsemi_n20__raw,Res-PS16,ped_sepsis,1500,7403,150,0.6866666666666666,0.4078076455491017,0.186,0.5172227475347831,0.043333333333333335,0.0009455626097528029,0.054,0.017695528839659597,0.024,0.00013508037282182898,0.006,0.05619343509388086,0.7628323652573281,0.7266430987733835,0.5962169828407216,16,False,0.9933333333333333,0.21333333333333335,0.6666666666666666,0.4066666666666667,4.333333333333334,0.09455626097528029,1938.0,1895.0
|
| 43 |
+
scsemi_n20__raw,Res-PS21,ped_sepsis,1500,6455,150,0.8873333333333333,0.2689388071262587,0.08533333333333333,0.19550735863671573,0.008666666666666666,0.339426800929512,0.014,0.06893880712625872,0.0006666666666666666,0.002168861347792409,0.004,0.12501936483346243,1.2367890524141494,0.3938797964615466,0.5483150439076165,13,False,1.0,0.16666666666666666,0.72,0.34,0.8666666666666666,33.9426800929512,1938.0,1720.0
|
| 44 |
+
scsemi_n20__raw,Res-S125,adult_sepsis,1500,3975,150,0.5246666666666666,0.510188679245283,0.14466666666666667,0.24125786163522012,0.11666666666666667,0.14440251572327045,0.028,0.0810062893081761,0.04,0.0015094339622641509,0.146,0.021635220125786163,0.35466666666666663,0.28988953232584097,0.5333303302383546,3,False,1.0,0.06666666666666667,0.43333333333333335,0.3,11.666666666666666,14.440251572327046,1940.0,1933.0
|
| 45 |
+
scsemi_n20__raw,Res-S136,adult_sepsis,1500,2882,150,0.31866666666666665,0.3650242886884108,0.074,0.04996530187369882,0.5113333333333333,0.4961832061068702,0.027333333333333334,0.034004163775156145,0.012666666666666666,0.004857737682165163,0.056,0.04996530187369882,0.10605690492713392,0.5643591909516315,0.6184236807072843,1,True,0.9933333333333333,0.05333333333333334,0.72,0.4666666666666667,51.13333333333333,49.61832061068702,1937.0,3386.0
|
| 46 |
+
scsemi_n20__raw,Res-S149,adult_sepsis,1500,7304,150,0.5706666666666667,0.37089266155531214,0.102,0.10282037239868565,0.22733333333333333,0.40963855421686746,0.034,0.06489594742606791,0.012,0.003696604600219058,0.054,0.04805585980284775,0.4280430814165753,0.37943529483069355,0.6987538261980553,1,True,0.9533333333333334,0.14,0.46,0.30666666666666664,22.733333333333334,40.963855421686745,1939.0,2356.0
|
| 47 |
+
scsemi_n20__raw,Skin-S38,adult_sepsis,1500,9976,150,0.5993333333333334,0.8330994386527666,0.128,0.13572574178027266,0.118,0.00020048115477145148,0.058,0.02475942261427426,0.03133333333333333,0.00020048115477145148,0.06533333333333333,0.006014434643143544,0.4829836941994118,0.8341668304791459,0.5711478059279176,15,False,0.9533333333333334,0.11333333333333333,0.3466666666666667,0.24,11.799999999999999,0.020048115477145148,1936.0,1675.0
|
| 48 |
+
scsemi_n20__raw,Uri-S134,adult_sepsis,1500,9030,150,0.37733333333333335,0.3501661129568106,0.116,0.038981173864894796,0.446,0.5069767441860465,0.016,0.037541528239202655,0.006666666666666667,0.0035437430786267998,0.038,0.06279069767441861,0.21461794019933564,0.5870901000982757,0.6336061231660719,3,False,1.0,0.18666666666666668,0.5066666666666667,0.38666666666666666,44.6,50.697674418604656,1941.0,2577.0
|
| 49 |
+
scsemi_n20__raw,Uri-S20,adult_sepsis,1500,4516,150,0.312,0.41054030115146145,0.06,0.0812666076173605,0.25266666666666665,0.3961470327723649,0.0026666666666666666,0.03897254207263064,0.04733333333333333,0.001550044286979628,0.3253333333333333,0.07152347209920283,0.5991863005609683,0.36044145076903955,0.5600586431030506,2,False,1.0,0.1,0.8,0.4,25.266666666666666,39.614703277236494,1939.0,4883.5
|
| 50 |
+
scsemi_n40__raw,Abd-S102,adult_sepsis,1500,9512,150,0.732,0.47981497056349875,0.17733333333333334,0.39318755256518084,0.050666666666666665,0.0053616484440706475,0.0033333333333333335,0.095878889823381,0.0026666666666666666,0.0007359125315391085,0.034,0.02502102607232969,0.6167995514437903,0.5809371755543881,0.5197326871215568,9,False,0.9933333333333333,0.10666666666666667,0.98,0.28,5.066666666666666,0.5361648444070648,1962.0,1646.0
|
| 51 |
+
scsemi_n40__raw,Abd-S103,adult_sepsis,1500,9423,150,0.37066666666666664,0.4813753581661891,0.4766666666666667,0.14782977820227103,0.066,0.0024408362517245037,0.05733333333333333,0.04393505253104107,0.0013333333333333333,0.00021224663058473945,0.028,0.3242067282181895,0.8138308394354239,0.6326678068482368,0.6506918051121944,2,False,0.9533333333333334,0.41333333333333333,0.7066666666666667,0.44,6.6000000000000005,0.24408362517245036,1962.0,971.0
|
| 52 |
+
scsemi_n40__raw,Abd-S51,adult_sepsis,1500,6865,150,0.30733333333333335,0.25273124544792425,0.08333333333333333,0.269482884195193,0.488,0.3551347414420976,0.028666666666666667,0.03670793882010197,0.014,0.0014566642388929353,0.07866666666666666,0.08448652585579024,0.4000213644088371,0.49873446759411355,0.5694394541057234,3,False,1.0,0.20666666666666667,0.8733333333333333,0.5,48.8,35.51347414420976,1965.0,1849.0
|
| 53 |
+
scsemi_n40__raw,Abd-S83,adult_sepsis,1500,6209,150,0.24933333333333332,0.3924947656627476,0.06466666666666666,0.16991464003865356,0.49666666666666665,0.049927524561120956,0.015333333333333332,0.3013367692059913,0.022,0.0009663391850539539,0.152,0.0853599613464326,1.0688256831481182,0.5160252489243918,0.5414431436899338,8,False,1.0,0.17333333333333334,0.64,0.5266666666666666,49.666666666666664,4.992752456112096,1961.0,1649.0
|
| 54 |
+
scsemi_n40__raw,HC12,adult_HC,1500,3720,150,0.6446666666666667,0.5456989247311828,0.054,0.05725806451612903,0.13533333333333333,0.14623655913978495,0.10933333333333334,0.2196236559139785,0.02266666666666667,0.008870967741935484,0.034,0.022311827956989248,0.24890322580645172,0.5323006254835988,0.6378894756963879,9,False,0.9733333333333334,0.06,0.4666666666666667,0.43333333333333335,13.533333333333333,14.623655913978496,1965.0,2457.5
|
| 55 |
+
scsemi_n40__raw,IC22,adult_ICU_ctrl,1500,2107,150,0.87,0.16753678215472234,0.11133333333333334,0.01613668723303275,0.005333333333333333,0.722828666350261,0.0,0.019933554817275746,0.006,0.04129093497864262,0.007333333333333333,0.0322733744660655,1.5953197278911562,1.1255936603700172,0.4945712781298649,16,False,0.9733333333333334,0.05333333333333334,0.31333333333333335,0.30666666666666664,0.5333333333333333,72.2828666350261,1961.0,3217.0
|
| 56 |
+
scsemi_n40__raw,PIC01,ped_ICU_ctrl,1500,8345,150,0.622,0.647813061713601,0.05533333333333333,0.07070101857399641,0.15466666666666667,0.12055122828040743,0.096,0.11024565608148593,0.037333333333333336,0.004313960455362493,0.034666666666666665,0.04637507489514679,0.1342696225284602,0.5079475218536647,0.5480100830941383,12,False,0.9666666666666667,0.08,0.43333333333333335,0.26666666666666666,15.466666666666667,12.055122828040743,1959.0,2157.0
|
| 57 |
+
scsemi_n40__raw,Res-PS02,ped_sepsis,1500,6473,150,0.6353333333333333,0.5892167464854009,0.15733333333333333,0.33848292909006644,0.019333333333333334,0.012050054070755446,0.05333333333333334,0.05051753437355168,0.0,0.0,0.13466666666666666,0.009732735980225553,0.3622991915134661,0.6592152399467534,0.612208111185723,10,False,1.0,0.14,0.7866666666666666,0.4066666666666667,1.9333333333333333,1.2050054070755445,1962.0,1680.0
|
| 58 |
+
scsemi_n40__raw,Res-PS16,ped_sepsis,1500,7403,150,0.6493333333333333,0.4078076455491017,0.05733333333333333,0.5172227475347831,0.038,0.0009455626097528029,0.012666666666666666,0.017695528839659597,0.07866666666666666,0.00013508037282182898,0.164,0.05619343509388086,0.9298365527488854,0.7266430987733835,0.5304174928287823,15,False,1.0,0.2,0.9533333333333334,0.32,3.8,0.09455626097528029,1962.0,1895.0
|
| 59 |
+
scsemi_n40__raw,Res-PS21,ped_sepsis,1500,6455,150,0.8846666666666667,0.2689388071262587,0.08533333333333333,0.19550735863671573,0.008666666666666666,0.339426800929512,0.014,0.06893880712625872,0.0006666666666666666,0.002168861347792409,0.006666666666666667,0.12501936483346243,1.2314557190808157,0.3938797964615466,0.548459916528074,13,False,1.0,0.16666666666666666,0.7266666666666667,0.38666666666666666,0.8666666666666666,33.9426800929512,1962.0,1720.0
|
| 60 |
+
scsemi_n40__raw,Res-S125,adult_sepsis,1500,3975,150,0.5426666666666666,0.510188679245283,0.19,0.24125786163522012,0.196,0.14440251572327045,0.02266666666666667,0.0810062893081761,0.004666666666666667,0.0015094339622641509,0.044,0.021635220125786163,0.2191949685534591,0.28988953232584097,0.6237875439471707,5,False,0.9666666666666667,0.07333333333333333,0.52,0.42,19.6,14.440251572327046,1960.0,1933.0
|
| 61 |
+
scsemi_n40__raw,Res-S136,adult_sepsis,1500,2882,150,0.414,0.3650242886884108,0.066,0.04996530187369882,0.458,0.4961832061068702,0.02266666666666667,0.034004163775156145,0.018,0.004857737682165163,0.021333333333333333,0.04996530187369882,0.15630534351145034,0.5643591909516315,0.6608151032639286,1,True,0.9733333333333334,0.05333333333333334,0.5866666666666667,0.4866666666666667,45.800000000000004,49.61832061068702,1960.5,3386.0
|
| 62 |
+
scsemi_n40__raw,Res-S149,adult_sepsis,1500,7304,150,0.5646666666666667,0.37089266155531214,0.10133333333333333,0.10282037239868565,0.22733333333333333,0.40963855421686746,0.03333333333333333,0.06489594742606791,0.012666666666666666,0.003696604600219058,0.06066666666666667,0.04805585980284775,0.4307097480832421,0.37943529483069355,0.6997379643159486,1,True,0.96,0.14,0.56,0.35333333333333333,22.733333333333334,40.963855421686745,1961.0,2356.0
|
| 63 |
+
scsemi_n40__raw,Skin-S38,adult_sepsis,1500,9976,150,0.5753333333333334,0.8330994386527666,0.07733333333333334,0.13572574178027266,0.214,0.00020048115477145148,0.08,0.02475942261427426,0.021333333333333333,0.00020048115477145148,0.032,0.006014434643143544,0.6323170275327452,0.8341668304791459,0.5947890654117508,15,False,0.96,0.1,0.6266666666666667,0.30666666666666664,21.4,0.020048115477145148,1960.0,1675.0
|
| 64 |
+
scsemi_n40__raw,Uri-S134,adult_sepsis,1500,9030,150,0.38066666666666665,0.3501661129568106,0.114,0.038981173864894796,0.44466666666666665,0.5069767441860465,0.014,0.037541528239202655,0.008666666666666666,0.0035437430786267998,0.038,0.06279069767441861,0.2212846068660023,0.5870901000982757,0.6334267988266497,3,False,0.9933333333333333,0.17333333333333334,0.5466666666666666,0.4066666666666667,44.46666666666667,50.697674418604656,1962.0,2577.0
|
| 65 |
+
scsemi_n40__raw,Uri-S20,adult_sepsis,1500,4516,150,0.31466666666666665,0.41054030115146145,0.06066666666666667,0.0812666076173605,0.25533333333333336,0.3961470327723649,0.0026666666666666666,0.03897254207263064,0.043333333333333335,0.001550044286979628,0.3233333333333333,0.07152347209920283,0.5871863005609683,0.36044145076903955,0.5601550863180718,2,False,1.0,0.10666666666666667,0.74,0.56,25.533333333333335,39.614703277236494,1961.0,4883.5
|
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold3/summary.json
ADDED
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|
| 1 |
+
{
|
| 2 |
+
"schema": "paired_ft_scores.v1",
|
| 3 |
+
"dataset": "ye2026_sepsis",
|
| 4 |
+
"written_utc": "2026-10-08T02:07:50.615235+00:00",
|
| 5 |
+
"command": [
|
| 6 |
+
"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
|
| 7 |
+
"--dataset",
|
| 8 |
+
"ye2026_sepsis",
|
| 9 |
+
"--out",
|
| 10 |
+
"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold3",
|
| 11 |
+
"--threads",
|
| 12 |
+
"8",
|
| 13 |
+
"--arm",
|
| 14 |
+
"scsemi_n5__raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/ye2026_sepsis/fold3/scsemi_n5__raw.npz",
|
| 15 |
+
"--arm",
|
| 16 |
+
"scsemi_n10__raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/ye2026_sepsis/fold3/scsemi_n10__raw.npz",
|
| 17 |
+
"--arm",
|
| 18 |
+
"scsemi_n20__raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/ye2026_sepsis/fold3/scsemi_n20__raw.npz",
|
| 19 |
+
"--arm",
|
| 20 |
+
"scsemi_n40__raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/ye2026_sepsis/fold3/scsemi_n40__raw.npz",
|
| 21 |
+
"--case-groups",
|
| 22 |
+
"adult_sepsis,ped_sepsis",
|
| 23 |
+
"--control-groups",
|
| 24 |
+
"adult_HC,adult_ICU_ctrl,ped_HC,ped_ICU_ctrl"
|
| 25 |
+
],
|
| 26 |
+
"arms": [
|
| 27 |
+
"scsemi_n5__raw",
|
| 28 |
+
"scsemi_n10__raw",
|
| 29 |
+
"scsemi_n20__raw",
|
| 30 |
+
"scsemi_n40__raw"
|
| 31 |
+
],
|
| 32 |
+
"donors": [
|
| 33 |
+
"Abd-S102",
|
| 34 |
+
"Abd-S103",
|
| 35 |
+
"Abd-S51",
|
| 36 |
+
"Abd-S83",
|
| 37 |
+
"HC12",
|
| 38 |
+
"IC22",
|
| 39 |
+
"PIC01",
|
| 40 |
+
"Res-PS02",
|
| 41 |
+
"Res-PS16",
|
| 42 |
+
"Res-PS21",
|
| 43 |
+
"Res-S125",
|
| 44 |
+
"Res-S136",
|
| 45 |
+
"Res-S149",
|
| 46 |
+
"Skin-S38",
|
| 47 |
+
"Uri-S134",
|
| 48 |
+
"Uri-S20"
|
| 49 |
+
],
|
| 50 |
+
"n_donors": 16,
|
| 51 |
+
"reference": {
|
| 52 |
+
"cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/ye2026_sepsis",
|
| 53 |
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"reference_sha256": "bac12da8a241652cb75100a1b082b2be56806c9bf2fd20ce6f927f19683ea5b8",
|
| 54 |
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|
| 55 |
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"n_r1_cells": 2400,
|
| 56 |
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"pca": {
|
| 57 |
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"n_components": 50,
|
| 58 |
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|
| 59 |
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|
| 60 |
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},
|
| 61 |
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"r2_control": {
|
| 62 |
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"precision": 0.9966666666666667,
|
| 63 |
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"coverage": 1.0,
|
| 64 |
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"density": 2.0915,
|
| 65 |
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"n_query": 2400,
|
| 66 |
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"depth_matched": {
|
| 67 |
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"precision": 0.9970833333333333,
|
| 68 |
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"coverage": 1.0,
|
| 69 |
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"density": 2.0460833333333333
|
| 70 |
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}
|
| 71 |
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|
| 72 |
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"observed_l1_loo_null_mean": 0.5743329400790451
|
| 73 |
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},
|
| 74 |
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"contrast_definition": {
|
| 75 |
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"enabled": true,
|
| 76 |
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"rule": "explicit --case-groups / --control-groups",
|
| 77 |
+
"group_source": "features groups",
|
| 78 |
+
"case_groups": [
|
| 79 |
+
"adult_sepsis",
|
| 80 |
+
"ped_sepsis"
|
| 81 |
+
],
|
| 82 |
+
"control_groups": [
|
| 83 |
+
"adult_HC",
|
| 84 |
+
"adult_ICU_ctrl",
|
| 85 |
+
"ped_HC",
|
| 86 |
+
"ped_ICU_ctrl"
|
| 87 |
+
],
|
| 88 |
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"n_case_donors": 13,
|
| 89 |
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|
| 90 |
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"n_donors_in_neither": 0,
|
| 91 |
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"case": [
|
| 92 |
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true,
|
| 93 |
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true,
|
| 94 |
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true,
|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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true,
|
| 103 |
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|
| 104 |
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true,
|
| 105 |
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|
| 106 |
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true,
|
| 107 |
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true
|
| 108 |
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],
|
| 109 |
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"ctrl": [
|
| 110 |
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false,
|
| 111 |
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|
| 112 |
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false,
|
| 113 |
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false,
|
| 114 |
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true,
|
| 115 |
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true,
|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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false,
|
| 122 |
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false,
|
| 123 |
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false,
|
| 124 |
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false,
|
| 125 |
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false
|
| 126 |
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],
|
| 127 |
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"groups": [
|
| 128 |
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"adult_sepsis",
|
| 129 |
+
"adult_sepsis",
|
| 130 |
+
"adult_sepsis",
|
| 131 |
+
"adult_sepsis",
|
| 132 |
+
"adult_HC",
|
| 133 |
+
"adult_ICU_ctrl",
|
| 134 |
+
"ped_ICU_ctrl",
|
| 135 |
+
"ped_sepsis",
|
| 136 |
+
"ped_sepsis",
|
| 137 |
+
"ped_sepsis",
|
| 138 |
+
"adult_sepsis",
|
| 139 |
+
"adult_sepsis",
|
| 140 |
+
"adult_sepsis",
|
| 141 |
+
"adult_sepsis",
|
| 142 |
+
"adult_sepsis",
|
| 143 |
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"adult_sepsis"
|
| 144 |
+
]
|
| 145 |
+
},
|
| 146 |
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"deg_definition": {
|
| 147 |
+
"enabled": true,
|
| 148 |
+
"score": "top-50 DEG overlap per cell type (benchmark total_top50_overlap, Welch backend)",
|
| 149 |
+
"source": "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py",
|
| 150 |
+
"functions": [
|
| 151 |
+
"welch_bh_deg",
|
| 152 |
+
"top_deg_genes",
|
| 153 |
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"jaccard"
|
| 154 |
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],
|
| 155 |
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"reproduces": "utility_studies_final6k_20260925/sle top-50 DEG 81 (1,006 genes) / 84 (2,279 genes) = sum over the six gated types of top50_overlap_count",
|
| 156 |
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"top_n": 50,
|
| 157 |
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"fdr": 0.05,
|
| 158 |
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|
| 159 |
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"types": [
|
| 160 |
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|
| 161 |
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|
| 162 |
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|
| 163 |
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"NK cell",
|
| 164 |
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"DC"
|
| 165 |
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],
|
| 166 |
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"aggregates_source": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/ye2026_sepsis/deg_reference.npz",
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| 167 |
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|
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|
| 170 |
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|
| 171 |
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|
| 172 |
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|
| 173 |
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|
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|
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|
| 178 |
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|
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|
| 180 |
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|
| 181 |
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|
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|
| 183 |
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|
| 184 |
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|
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|
| 186 |
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|
| 187 |
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| 188 |
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|
| 189 |
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|
| 190 |
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| 191 |
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| 192 |
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|
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|
| 194 |
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|
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|
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|
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|
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|
| 202 |
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|
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|
| 210 |
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}
|
| 211 |
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|
| 212 |
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|
| 213 |
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"n_cells_obs": 20084,
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| 1298 |
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"n_cells_gen": 2898
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| 1299 |
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},
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| 1300 |
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"Monocyte": {
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"deg_scored": true,
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"n_cells_gen": 4887
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"n_cells_gen": 848
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"DC": {
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"code_sha256": {
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
|
| 1349 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py": "48b12d794782b840838853e93e0fc55fab00532c4b3698f4588e926b985d2881",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/immicro/tools/immicro_common.py": "c5c30e917148cc5e664e91ea30c11bbdff9b6d1f53a3e0a13e16b1917eff37e9",
|
| 1352 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/predict_scanvi.py": "482ee5dcf4d72b54bc36cbb6dcff62e5030bc7afc46cb5fb01eca73a82ee45a5",
|
| 1353 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/poisson_readout.py": "8bfa080942fbcdc89ae23b276524a1a83266fb8cbc56b9af279e50f82e6cde38"
|
| 1354 |
+
},
|
| 1355 |
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"seconds": 25.7
|
| 1356 |
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}
|
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/scsemi_budget_20261002/fold4/arms/scsemi_n10__raw/deg_top50_lists.csv
ADDED
|
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|
| 1 |
+
celltype,source,rank,gene_id
|
| 2 |
+
T cell,observed,1,ENSG00000272602
|
| 3 |
+
T cell,observed,2,ENSG00000154451
|
| 4 |
+
T cell,observed,3,ENSG00000100629
|
| 5 |
+
T cell,observed,4,ENSG00000172197
|
| 6 |
+
T cell,observed,5,ENSG00000197044
|
| 7 |
+
T cell,observed,6,ENSG00000150347
|
| 8 |
+
T cell,observed,7,ENSG00000100084
|
| 9 |
+
T cell,observed,8,ENSG00000148154
|
| 10 |
+
T cell,observed,9,ENSG00000119321
|
| 11 |
+
T cell,observed,10,ENSG00000124406
|
| 12 |
+
T cell,observed,11,ENSG00000142065
|
| 13 |
+
T cell,observed,12,ENSG00000122122
|
| 14 |
+
T cell,observed,13,ENSG00000158161
|
| 15 |
+
T cell,observed,14,ENSG00000134318
|
| 16 |
+
T cell,observed,15,ENSG00000118308
|
| 17 |
+
T cell,observed,16,ENSG00000163138
|
| 18 |
+
T cell,observed,17,ENSG00000115365
|
| 19 |
+
T cell,observed,18,ENSG00000185305
|
| 20 |
+
T cell,observed,19,ENSG00000187790
|
| 21 |
+
T cell,observed,20,ENSG00000177463
|
| 22 |
+
T cell,observed,21,ENSG00000083642
|
| 23 |
+
T cell,observed,22,ENSG00000181804
|
| 24 |
+
T cell,observed,23,ENSG00000182504
|
| 25 |
+
T cell,observed,24,ENSG00000197603
|
| 26 |
+
T cell,observed,25,ENSG00000148356
|
| 27 |
+
T cell,observed,26,ENSG00000178974
|
| 28 |
+
T cell,observed,27,ENSG00000197563
|
| 29 |
+
T cell,observed,28,ENSG00000006715
|
| 30 |
+
T cell,observed,29,ENSG00000136813
|
| 31 |
+
T cell,observed,30,ENSG00000132842
|
| 32 |
+
T cell,observed,31,ENSG00000100991
|
| 33 |
+
T cell,observed,32,ENSG00000160654
|
| 34 |
+
T cell,observed,33,ENSG00000165181
|
| 35 |
+
T cell,observed,34,ENSG00000118873
|
| 36 |
+
T cell,observed,35,ENSG00000149806
|
| 37 |
+
T cell,generated,1,ENSG00000239713
|
| 38 |
+
T cell,generated,2,ENSG00000203896
|
| 39 |
+
T cell,generated,3,ENSG00000000938
|
| 40 |
+
T cell,generated,4,ENSG00000175662
|
| 41 |
+
T cell,generated,5,ENSG00000109680
|
| 42 |
+
T cell,generated,6,ENSG00000171488
|
| 43 |
+
T cell,generated,7,ENSG00000109475
|
| 44 |
+
B cell,observed,1,ENSG00000182621
|
| 45 |
+
B cell,observed,2,ENSG00000160593
|
| 46 |
+
B cell,observed,3,ENSG00000155749
|
| 47 |
+
B cell,generated,1,ENSG00000105374
|
| 48 |
+
B cell,generated,2,ENSG00000163513
|
| 49 |
+
Monocyte,observed,1,ENSG00000164659
|
| 50 |
+
NK cell,generated,1,ENSG00000139626
|
| 51 |
+
NK cell,generated,2,ENSG00000204475
|
| 52 |
+
NK cell,generated,3,ENSG00000166750
|
| 53 |
+
NK cell,generated,4,ENSG00000115415
|
| 54 |
+
NK cell,generated,5,ENSG00000196139
|
| 55 |
+
NK cell,generated,6,ENSG00000168229
|
| 56 |
+
NK cell,generated,7,ENSG00000239713
|
| 57 |
+
NK cell,generated,8,ENSG00000136213
|
| 58 |
+
NK cell,generated,9,ENSG00000089159
|
| 59 |
+
NK cell,generated,10,ENSG00000028137
|
| 60 |
+
NK cell,generated,11,ENSG00000005844
|
| 61 |
+
NK cell,generated,12,ENSG00000113088
|
| 62 |
+
NK cell,generated,13,ENSG00000123349
|
| 63 |
+
NK cell,generated,14,ENSG00000120910
|