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  1. paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraA_20261002T000131.log +0 -0
  2. paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.jobs +3 -0
  3. paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.log +542 -0
  4. paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/metadata/request.json +0 -0
paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraA_20261002T000131.log ADDED
The diff for this file is too large to render. See raw diff
 
paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.jobs ADDED
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1
+ --design fewshot --dataset ye2026_sepsis --draws 0,1,2,3,4 --threads 6
2
+ --design fewshot --dataset imperial_eskd --draws 0,1,2,3,4 --threads 6
3
+ --design pooled --dataset imperial_eskd --threads 8
paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.log ADDED
@@ -0,0 +1,542 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ JOB_START 2026-10-02T00:01:31+09:00 --design fewshot --dataset ye2026_sepsis --draws 0,1,2,3,4 --threads 6
2
+ 00:01:32 ye2026_sepsis fewshot draw0 : 77 scored samples; fitting the scorer's view
3
+ 00:01:36 bandwidth m (median pairwise distance of R1, PCA-50) = 27.7080
4
+ 00:01:44 observed cells: 556369 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n)
5
+ 00:03:05 real_R2 [R1 raw] P/C k10 0.9815/0.9997 k5 0.9389/0.9890 k3 0.8719/0.9258 | AUC knn 0.517 rf 0.598 | 1-NN 0.507 | MMD2 0.0000 (32.5 s)
6
+ 00:03:38 real_R2 [R1 dm] P/C k10 0.9810/0.9997 k5 0.9351/0.9884 k3 0.8657/0.9220 | AUC knn 0.515 rf 0.590 | 1-NN 0.506 | MMD2 0.0000 (32.3 s)
7
+ 00:04:08 real_R3 [R2 raw] AUC knn 0.498 rf 0.500 | 1-NN 0.503 | MMD2 -0.0000 (28.0 s)
8
+ 00:04:35 real_R3 [R2 dm] AUC knn 0.498 rf 0.493 | 1-NN 0.506 | MMD2 -0.0000 (27.4 s)
9
+ 00:04:44 real_R2 E_N[pc] sq 0.2106 (LB 155.320 UB 303.922 Dif 186.618) l2 0.2258 (8.6 s)
10
+ 00:06:22 real_R2 E_N[all] sq 0.0951 (LB 124.845 UB 212.601 Dif 133.193) l2 0.0999 (73.8 s)
11
+ 00:06:36 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
12
+ 00:07:01 zs_raw [R1 raw] P/C k10 0.6338/0.0753 k5 0.4709/0.0482 k3 0.3682/0.0339 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1881 (23.2 s)
13
+ 00:07:24 zs_raw [R1 dm] P/C k10 0.6034/0.0731 k5 0.4371/0.0457 k3 0.3444/0.0314 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1900 (22.3 s)
14
+ 00:07:47 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1906 (21.2 s)
15
+ 00:08:07 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1926 (20.4 s)
16
+ 00:08:17 zs_raw E_N[pc] sq 16.8781 (LB 240.335 UB 263.778 Dif 635.997) l2 13.4746 (9.7 s)
17
+ 00:09:42 zs_raw E_N[all] sq 5.1221 (LB 139.571 UB 199.136 Dif 444.672) l2 4.0300 (84.6 s)
18
+ 00:09:42 zs_raw done in 200 s
19
+ 00:09:58 zs_cal: zs__cal.npz sha 79a2764df017 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
20
+ 00:10:25 zs_cal [R1 raw] P/C k10 0.8962/0.4681 k5 0.7423/0.3280 k3 0.5964/0.2439 | AUC knn 0.981 rf 0.985 | 1-NN 0.930 | MMD2 0.0373 (25.5 s)
21
+ 00:10:49 zs_cal [R1 dm] P/C k10 0.9131/0.6859 k5 0.7894/0.5279 k3 0.6582/0.4091 | AUC knn 0.957 rf 0.971 | 1-NN 0.872 | MMD2 0.0286 (24.3 s)
22
+ 00:11:12 zs_cal [R2 raw] AUC knn 0.983 rf 0.986 | 1-NN 0.936 | MMD2 0.0365 (21.2 s)
23
+ 00:11:35 zs_cal [R2 dm] AUC knn 0.958 rf 0.972 | 1-NN 0.881 | MMD2 0.0281 (22.3 s)
24
+ 00:11:47 zs_cal E_N[pc] sq 1.3623 (LB 170.752 UB 291.526 Dif 335.282) l2 1.4013 (11.9 s)
25
+ 00:13:12 zs_cal E_N[all] sq 1.8640 (LB 126.821 UB 203.226 Dif 269.236) l2 1.7439 (84.9 s)
26
+ 00:13:12 zs_cal done in 210 s
27
+ 00:13:28 lora5: lora__raw.npz sha 9250ea293b8c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
28
+ 00:13:56 lora5 [R1 raw] P/C k10 0.9268/0.7059 k5 0.8023/0.5426 k3 0.6721/0.4229 | AUC knn 0.938 rf 0.946 | 1-NN 0.842 | MMD2 0.0215 (25.6 s)
29
+ 00:14:20 lora5 [R1 dm] P/C k10 0.9396/0.8258 k5 0.8441/0.6855 k3 0.7362/0.5594 | AUC knn 0.899 rf 0.924 | 1-NN 0.794 | MMD2 0.0199 (23.9 s)
30
+ 00:14:44 lora5 [R2 raw] AUC knn 0.939 rf 0.944 | 1-NN 0.844 | MMD2 0.0209 (22.5 s)
31
+ 00:15:07 lora5 [R2 dm] AUC knn 0.896 rf 0.920 | 1-NN 0.792 | MMD2 0.0196 (23.1 s)
32
+ 00:15:20 lora5 E_N[pc] sq 1.1792 (LB 180.756 UB 291.881 Dif 311.800) l2 1.2241 (12.1 s)
33
+ 00:16:58 lora5 E_N[all] sq 1.4218 (LB 129.801 UB 203.637 Dif 234.782) l2 1.3699 (98.2 s)
34
+ 00:16:58 lora5 done in 226 s
35
+ 00:17:11 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
36
+ 00:17:37 zs_pseudo [R1 raw] P/C k10 0.9193/0.5025 k5 0.7855/0.3575 k3 0.6390/0.2670 | AUC knn 0.976 rf 0.983 | 1-NN 0.920 | MMD2 0.0285 (23.9 s)
37
+ 00:18:02 zs_pseudo [R1 dm] P/C k10 0.9350/0.7568 k5 0.8341/0.5962 k3 0.7246/0.4667 | AUC knn 0.947 rf 0.964 | 1-NN 0.857 | MMD2 0.0192 (24.1 s)
38
+ 00:18:25 zs_pseudo [R2 raw] AUC knn 0.979 rf 0.984 | 1-NN 0.928 | MMD2 0.0279 (21.6 s)
39
+ 00:18:47 zs_pseudo [R2 dm] AUC knn 0.947 rf 0.966 | 1-NN 0.855 | MMD2 0.0189 (22.4 s)
40
+ 00:18:59 zs_pseudo E_N[pc] sq 1.1455 (LB 170.141 UB 292.623 Dif 310.446) l2 1.2205 (11.4 s)
41
+ 00:20:24 zs_pseudo E_N[all] sq 1.6131 (LB 126.808 UB 203.398 Dif 250.356) l2 1.5578 (84.3 s)
42
+ 00:20:24 zs_pseudo done in 205 s
43
+ 00:20:33 scsemi5: scsemi5__raw.npz sha 80d99f5363d0 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
44
+ 00:20:58 scsemi5 [R1 raw] P/C k10 0.7842/0.0617 k5 0.5822/0.0404 k3 0.4285/0.0285 | AUC knn 0.998 rf 1.000 | 1-NN 0.993 | MMD2 0.2125 (23.1 s)
45
+ 00:21:22 scsemi5 [R1 dm] P/C k10 0.5558/0.1102 k5 0.4189/0.0668 k3 0.3200/0.0442 | AUC knn 0.997 rf 1.000 | 1-NN 0.989 | MMD2 0.1475 (24.6 s)
46
+ 00:21:47 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.2132 (23.0 s)
47
+ 00:22:09 scsemi5 [R2 dm] AUC knn 0.997 rf 1.000 | 1-NN 0.990 | MMD2 0.1470 (22.4 s)
48
+ 00:22:19 scsemi5 E_N[pc] sq 2.2144 (LB 107.210 UB 291.274 Dif 514.795) l2 1.8818 (9.9 s)
49
+ 00:23:43 scsemi5 E_N[all] sq 4.4232 (LB 107.359 UB 200.718 Dif 520.303) l2 3.1330 (83.5 s)
50
+ 00:23:43 scsemi5 done in 199 s
51
+ 00:23:43 unit draw0 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw0 in 1331.2 s (k=10 max |diff| vs scorer 0.00e+00)
52
+ 00:23:43 ye2026_sepsis fewshot draw1 : 77 scored samples; fitting the scorer's view
53
+ 00:23:48 bandwidth m (median pairwise distance of R1, PCA-50) = 27.5059
54
+ 00:23:49 observed cells: 556805 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n)
55
+ 00:25:06 real_R2 [R1 raw] P/C k10 0.9817/0.9996 k5 0.9401/0.9859 k3 0.8729/0.9255 | AUC knn 0.518 rf 0.597 | 1-NN 0.507 | MMD2 0.0000 (33.0 s)
56
+ 00:25:40 real_R2 [R1 dm] P/C k10 0.9815/0.9997 k5 0.9386/0.9854 k3 0.8707/0.9239 | AUC knn 0.512 rf 0.594 | 1-NN 0.507 | MMD2 0.0000 (33.9 s)
57
+ 00:26:10 real_R3 [R2 raw] AUC knn 0.502 rf 0.495 | 1-NN 0.502 | MMD2 -0.0000 (27.4 s)
58
+ 00:26:39 real_R3 [R2 dm] AUC knn 0.498 rf 0.497 | 1-NN 0.499 | MMD2 -0.0000 (29.2 s)
59
+ 00:26:49 real_R2 E_N[pc] sq 0.2122 (LB 156.538 UB 304.780 Dif 187.988) l2 0.2227 (9.8 s)
60
+ 00:28:22 real_R2 E_N[all] sq 0.1031 (LB 125.007 UB 215.767 Dif 134.366) l2 0.1073 (74.9 s)
61
+ 00:28:24 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
62
+ 00:28:51 zs_raw [R1 raw] P/C k10 0.6130/0.0769 k5 0.4233/0.0481 k3 0.2990/0.0341 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1937 (24.6 s)
63
+ 00:29:13 zs_raw [R1 dm] P/C k10 0.5745/0.0744 k5 0.4014/0.0454 k3 0.2861/0.0321 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1951 (22.2 s)
64
+ 00:29:36 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1955 (21.6 s)
65
+ 00:29:56 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1967 (19.6 s)
66
+ 00:30:05 zs_raw E_N[pc] sq 17.9698 (LB 241.501 UB 263.486 Dif 636.561) l2 12.6370 (9.1 s)
67
+ 00:31:35 zs_raw E_N[all] sq 5.4307 (LB 141.187 UB 197.242 Dif 445.608) l2 4.3015 (89.6 s)
68
+ 00:31:35 zs_raw done in 193 s
69
+ 00:31:50 zs_cal: zs__cal.npz sha af1cb58210f6 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
70
+ 00:32:18 zs_cal [R1 raw] P/C k10 0.9042/0.3480 k5 0.7666/0.2390 k3 0.6165/0.1761 | AUC knn 0.984 rf 0.990 | 1-NN 0.946 | MMD2 0.0620 (26.0 s)
71
+ 00:32:41 zs_cal [R1 dm] P/C k10 0.8990/0.5729 k5 0.7678/0.4291 k3 0.6456/0.3249 | AUC knn 0.968 rf 0.980 | 1-NN 0.900 | MMD2 0.0523 (23.6 s)
72
+ 00:33:06 zs_cal [R2 raw] AUC knn 0.987 rf 0.991 | 1-NN 0.950 | MMD2 0.0622 (23.0 s)
73
+ 00:33:29 zs_cal [R2 dm] AUC knn 0.968 rf 0.981 | 1-NN 0.904 | MMD2 0.0526 (22.7 s)
74
+ 00:33:40 zs_cal E_N[pc] sq 1.5755 (LB 171.332 UB 292.251 Dif 361.840) l2 1.5609 (10.7 s)
75
+ 00:35:16 zs_cal E_N[all] sq 2.2043 (LB 127.991 UB 201.538 Dif 290.115) l2 2.0302 (96.2 s)
76
+ 00:35:16 zs_cal done in 221 s
77
+ 00:35:32 lora5: lora__raw.npz sha 4a35cbcd1fa7 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
78
+ 00:35:58 lora5 [R1 raw] P/C k10 0.9158/0.6619 k5 0.7970/0.5048 k3 0.6695/0.3942 | AUC knn 0.945 rf 0.953 | 1-NN 0.863 | MMD2 0.0321 (24.8 s)
79
+ 00:36:20 lora5 [R1 dm] P/C k10 0.9192/0.8177 k5 0.8126/0.6797 k3 0.6990/0.5557 | AUC knn 0.904 rf 0.931 | 1-NN 0.795 | MMD2 0.0267 (22.3 s)
80
+ 00:36:44 lora5 [R2 raw] AUC knn 0.948 rf 0.952 | 1-NN 0.865 | MMD2 0.0323 (22.1 s)
81
+ 00:37:06 lora5 [R2 dm] AUC knn 0.903 rf 0.930 | 1-NN 0.803 | MMD2 0.0270 (21.1 s)
82
+ 00:37:16 lora5 E_N[pc] sq 1.2977 (LB 180.411 UB 292.499 Dif 325.867) l2 1.2921 (10.6 s)
83
+ 00:38:59 lora5 E_N[all] sq 1.6095 (LB 130.588 UB 201.614 Dif 244.904) l2 1.5251 (102.2 s)
84
+ 00:38:59 lora5 done in 222 s
85
+ 00:39:01 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
86
+ 00:39:26 zs_pseudo [R1 raw] P/C k10 0.9208/0.5048 k5 0.7939/0.3636 k3 0.6571/0.2708 | AUC knn 0.977 rf 0.982 | 1-NN 0.920 | MMD2 0.0290 (23.6 s)
87
+ 00:39:53 zs_pseudo [R1 dm] P/C k10 0.9358/0.7634 k5 0.8401/0.6026 k3 0.7332/0.4780 | AUC knn 0.945 rf 0.964 | 1-NN 0.853 | MMD2 0.0195 (26.6 s)
88
+ 00:40:16 zs_pseudo [R2 raw] AUC knn 0.979 rf 0.983 | 1-NN 0.928 | MMD2 0.0286 (21.4 s)
89
+ 00:40:39 zs_pseudo [R2 dm] AUC knn 0.948 rf 0.967 | 1-NN 0.862 | MMD2 0.0196 (23.3 s)
90
+ 00:40:48 zs_pseudo E_N[pc] sq 1.1451 (LB 170.596 UB 293.539 Dif 311.379) l2 1.1891 (9.1 s)
91
+ 00:42:33 zs_pseudo E_N[all] sq 1.6751 (LB 127.896 UB 201.668 Dif 251.473) l2 1.6236 (104.2 s)
92
+ 00:42:33 zs_pseudo done in 214 s
93
+ 00:42:42 scsemi5: scsemi5__raw.npz sha f2f4b09d2711 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
94
+ 00:43:12 scsemi5 [R1 raw] P/C k10 0.7484/0.0826 k5 0.5590/0.0591 k3 0.4339/0.0419 | AUC knn 0.997 rf 1.000 | 1-NN 0.989 | MMD2 0.1611 (27.7 s)
95
+ 00:43:36 scsemi5 [R1 dm] P/C k10 0.4490/0.1782 k5 0.3096/0.1087 k3 0.2175/0.0747 | AUC knn 0.996 rf 0.999 | 1-NN 0.982 | MMD2 0.1000 (24.0 s)
96
+ 00:44:00 scsemi5 [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.992 | MMD2 0.1625 (23.2 s)
97
+ 00:44:24 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.984 | MMD2 0.1009 (23.3 s)
98
+ 00:44:37 scsemi5 E_N[pc] sq 2.1931 (LB 121.169 UB 289.507 Dif 490.356) l2 1.9314 (13.2 s)
99
+ 00:46:08 scsemi5 E_N[all] sq 3.7992 (LB 110.388 UB 198.193 Dif 443.977) l2 2.9602 (91.2 s)
100
+ 00:46:08 scsemi5 done in 215 s
101
+ 00:46:08 unit draw1 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw1 in 1345.5 s (k=10 max |diff| vs scorer 0.00e+00)
102
+ 00:46:09 ye2026_sepsis fewshot draw2 : 77 scored samples; fitting the scorer's view
103
+ 00:46:13 bandwidth m (median pairwise distance of R1, PCA-50) = 27.9152
104
+ 00:46:14 observed cells: 560751 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n)
105
+ 00:47:36 real_R2 [R1 raw] P/C k10 0.9816/0.9999 k5 0.9391/0.9859 k3 0.8769/0.9262 | AUC knn 0.517 rf 0.595 | 1-NN 0.508 | MMD2 0.0000 (32.0 s)
106
+ 00:48:08 real_R2 [R1 dm] P/C k10 0.9798/0.9996 k5 0.9362/0.9868 k3 0.8698/0.9255 | AUC knn 0.514 rf 0.591 | 1-NN 0.508 | MMD2 0.0000 (31.7 s)
107
+ 00:48:39 real_R3 [R2 raw] AUC knn 0.501 rf 0.499 | 1-NN 0.502 | MMD2 -0.0000 (29.6 s)
108
+ 00:49:08 real_R3 [R2 dm] AUC knn 0.499 rf 0.505 | 1-NN 0.502 | MMD2 -0.0000 (28.8 s)
109
+ 00:49:22 real_R2 E_N[pc] sq 0.2001 (LB 156.332 UB 313.913 Dif 187.867) l2 0.2130 (13.4 s)
110
+ 00:51:20 real_R2 E_N[all] sq 0.0997 (LB 125.113 UB 214.000 Dif 133.971) l2 0.1054 (95.3 s)
111
+ 00:51:23 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
112
+ 00:51:47 zs_raw [R1 raw] P/C k10 0.6405/0.0749 k5 0.4557/0.0471 k3 0.3365/0.0338 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1910 (22.8 s)
113
+ 00:52:12 zs_raw [R1 dm] P/C k10 0.5964/0.0727 k5 0.4226/0.0448 k3 0.3010/0.0326 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1927 (25.3 s)
114
+ 00:52:35 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1938 (20.4 s)
115
+ 00:52:55 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1952 (19.8 s)
116
+ 00:53:09 zs_raw E_N[pc] sq 13.2801 (LB 242.188 UB 272.080 Dif 639.152) l2 10.2735 (14.2 s)
117
+ 00:54:34 zs_raw E_N[all] sq 4.8738 (LB 139.968 UB 202.964 Dif 447.001) l2 3.8834 (84.2 s)
118
+ 00:54:34 zs_raw done in 194 s
119
+ 00:54:50 zs_cal: zs__cal.npz sha 37f4d4a91f86 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
120
+ 00:55:15 zs_cal [R1 raw] P/C k10 0.9041/0.4426 k5 0.7585/0.3088 k3 0.6072/0.2261 | AUC knn 0.982 rf 0.987 | 1-NN 0.936 | MMD2 0.0385 (23.8 s)
121
+ 00:55:41 zs_cal [R1 dm] P/C k10 0.9118/0.6776 k5 0.7909/0.5220 k3 0.6719/0.4067 | AUC knn 0.958 rf 0.973 | 1-NN 0.874 | MMD2 0.0293 (26.2 s)
122
+ 00:56:04 zs_cal [R2 raw] AUC knn 0.984 rf 0.987 | 1-NN 0.938 | MMD2 0.0383 (21.2 s)
123
+ 00:56:27 zs_cal [R2 dm] AUC knn 0.959 rf 0.974 | 1-NN 0.883 | MMD2 0.0293 (22.5 s)
124
+ 00:56:41 zs_cal E_N[pc] sq 1.3043 (LB 172.530 UB 301.581 Dif 340.850) l2 1.3363 (14.0 s)
125
+ 00:58:24 zs_cal E_N[all] sq 1.8371 (LB 127.382 UB 207.220 Dif 274.054) l2 1.7293 (102.5 s)
126
+ 00:58:24 zs_cal done in 230 s
127
+ 00:58:40 lora5: lora__raw.npz sha 5cede88e4555 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
128
+ 00:59:05 lora5 [R1 raw] P/C k10 0.9184/0.7606 k5 0.7972/0.6079 k3 0.6804/0.4895 | AUC knn 0.922 rf 0.939 | 1-NN 0.822 | MMD2 0.0191 (23.7 s)
129
+ 00:59:32 lora5 [R1 dm] P/C k10 0.9366/0.8435 k5 0.8448/0.7133 k3 0.7515/0.5938 | AUC knn 0.881 rf 0.912 | 1-NN 0.777 | MMD2 0.0161 (27.0 s)
130
+ 00:59:55 lora5 [R2 raw] AUC knn 0.921 rf 0.936 | 1-NN 0.818 | MMD2 0.0183 (20.6 s)
131
+ 01:00:19 lora5 [R2 dm] AUC knn 0.883 rf 0.908 | 1-NN 0.777 | MMD2 0.0156 (24.3 s)
132
+ 01:00:31 lora5 E_N[pc] sq 1.0234 (LB 179.952 UB 301.345 Dif 304.186) l2 1.0447 (12.2 s)
133
+ 01:01:53 lora5 E_N[all] sq 1.2801 (LB 129.837 UB 207.575 Dif 229.352) l2 1.2466 (81.0 s)
134
+ 01:01:53 lora5 done in 209 s
135
+ 01:01:55 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
136
+ 01:02:24 zs_pseudo [R1 raw] P/C k10 0.9171/0.5039 k5 0.7873/0.3612 k3 0.6387/0.2666 | AUC knn 0.977 rf 0.982 | 1-NN 0.922 | MMD2 0.0284 (27.3 s)
137
+ 01:02:48 zs_pseudo [R1 dm] P/C k10 0.9384/0.7511 k5 0.8371/0.5973 k3 0.7280/0.4662 | AUC knn 0.947 rf 0.965 | 1-NN 0.858 | MMD2 0.0194 (24.7 s)
138
+ 01:03:12 zs_pseudo [R2 raw] AUC knn 0.980 rf 0.984 | 1-NN 0.929 | MMD2 0.0278 (21.7 s)
139
+ 01:03:36 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.967 | 1-NN 0.860 | MMD2 0.0192 (24.1 s)
140
+ 01:03:47 zs_pseudo E_N[pc] sq 1.0725 (LB 171.136 UB 302.367 Dif 311.878) l2 1.1324 (10.7 s)
141
+ 01:05:22 zs_pseudo E_N[all] sq 1.5511 (LB 127.256 UB 207.291 Dif 251.399) l2 1.5108 (94.5 s)
142
+ 01:05:22 zs_pseudo done in 209 s
143
+ 01:05:31 scsemi5: scsemi5__raw.npz sha 6662fd4e121f (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
144
+ 01:05:56 scsemi5 [R1 raw] P/C k10 0.7821/0.0849 k5 0.6118/0.0602 k3 0.4783/0.0439 | AUC knn 0.997 rf 0.999 | 1-NN 0.988 | MMD2 0.1721 (24.0 s)
145
+ 01:06:22 scsemi5 [R1 dm] P/C k10 0.5984/0.1610 k5 0.4406/0.1043 k3 0.3253/0.0730 | AUC knn 0.994 rf 0.999 | 1-NN 0.980 | MMD2 0.1109 (25.7 s)
146
+ 01:06:44 scsemi5 [R2 raw] AUC knn 0.997 rf 1.000 | 1-NN 0.991 | MMD2 0.1725 (20.7 s)
147
+ 01:07:08 scsemi5 [R2 dm] AUC knn 0.994 rf 0.999 | 1-NN 0.983 | MMD2 0.1105 (23.8 s)
148
+ 01:07:21 scsemi5 E_N[pc] sq 1.9060 (LB 117.210 UB 300.654 Dif 466.860) l2 1.7074 (12.5 s)
149
+ 01:08:53 scsemi5 E_N[all] sq 3.5462 (LB 109.643 UB 204.639 Dif 446.514) l2 2.7237 (91.8 s)
150
+ 01:08:53 scsemi5 done in 211 s
151
+ 01:08:53 unit draw2 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw2 in 1364.5 s (k=10 max |diff| vs scorer 0.00e+00)
152
+ 01:08:53 ye2026_sepsis fewshot draw3 : 77 scored samples; fitting the scorer's view
153
+ 01:08:58 bandwidth m (median pairwise distance of R1, PCA-50) = 27.6395
154
+ 01:08:59 observed cells: 549877 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n)
155
+ 01:10:15 real_R2 [R1 raw] P/C k10 0.9804/0.9997 k5 0.9369/0.9854 k3 0.8743/0.9229 | AUC knn 0.516 rf 0.597 | 1-NN 0.509 | MMD2 0.0000 (32.1 s)
156
+ 01:10:47 real_R2 [R1 dm] P/C k10 0.9815/0.9999 k5 0.9385/0.9861 k3 0.8741/0.9219 | AUC knn 0.515 rf 0.591 | 1-NN 0.509 | MMD2 0.0000 (32.1 s)
157
+ 01:11:18 real_R3 [R2 raw] AUC knn 0.501 rf 0.489 | 1-NN 0.505 | MMD2 -0.0000 (29.1 s)
158
+ 01:11:48 real_R3 [R2 dm] AUC knn 0.500 rf 0.486 | 1-NN 0.504 | MMD2 -0.0000 (30.2 s)
159
+ 01:11:58 real_R2 E_N[pc] sq 0.2122 (LB 154.768 UB 301.972 Dif 186.005) l2 0.2267 (9.5 s)
160
+ 01:13:28 real_R2 E_N[all] sq 0.1035 (LB 123.103 UB 215.880 Dif 132.704) l2 0.1094 (67.8 s)
161
+ 01:13:30 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
162
+ 01:13:55 zs_raw [R1 raw] P/C k10 0.6137/0.0767 k5 0.3945/0.0487 k3 0.2732/0.0352 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1874 (23.3 s)
163
+ 01:14:20 zs_raw [R1 dm] P/C k10 0.5963/0.0729 k5 0.4188/0.0448 k3 0.3006/0.0320 | AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1895 (24.2 s)
164
+ 01:14:42 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1908 (20.7 s)
165
+ 01:15:03 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.988 | MMD2 0.1927 (21.1 s)
166
+ 01:15:16 zs_raw E_N[pc] sq 18.7625 (LB 240.160 UB 261.136 Dif 633.710) l2 14.7481 (12.8 s)
167
+ 01:16:51 zs_raw E_N[all] sq 4.9960 (LB 139.639 UB 200.487 Dif 443.638) l2 3.9591 (94.5 s)
168
+ 01:16:51 zs_raw done in 203 s
169
+ 01:17:05 zs_cal: zs__cal.npz sha f48fdecef0e2 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
170
+ 01:17:30 zs_cal [R1 raw] P/C k10 0.8971/0.4345 k5 0.7499/0.3042 k3 0.5981/0.2249 | AUC knn 0.982 rf 0.987 | 1-NN 0.933 | MMD2 0.0350 (23.5 s)
171
+ 01:17:55 zs_cal [R1 dm] P/C k10 0.9046/0.6709 k5 0.7795/0.5139 k3 0.6550/0.4022 | AUC knn 0.960 rf 0.973 | 1-NN 0.875 | MMD2 0.0262 (24.8 s)
172
+ 01:18:18 zs_cal [R2 raw] AUC knn 0.984 rf 0.988 | 1-NN 0.937 | MMD2 0.0349 (20.9 s)
173
+ 01:18:39 zs_cal [R2 dm] AUC knn 0.959 rf 0.973 | 1-NN 0.886 | MMD2 0.0262 (21.4 s)
174
+ 01:18:49 zs_cal E_N[pc] sq 1.4659 (LB 172.897 UB 289.512 Dif 343.840) l2 1.5026 (9.3 s)
175
+ 01:20:20 zs_cal E_N[all] sq 1.8831 (LB 126.789 UB 204.767 Dif 273.629) l2 1.7656 (90.8 s)
176
+ 01:20:20 zs_cal done in 209 s
177
+ 01:20:35 lora5: lora__raw.npz sha 27d0673b7f09 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
178
+ 01:20:59 lora5 [R1 raw] P/C k10 0.8843/0.6553 k5 0.7442/0.4945 k3 0.6113/0.3786 | AUC knn 0.940 rf 0.942 | 1-NN 0.849 | MMD2 0.0215 (23.0 s)
179
+ 01:21:24 lora5 [R1 dm] P/C k10 0.8821/0.8139 k5 0.7603/0.6665 k3 0.6464/0.5392 | AUC knn 0.891 rf 0.911 | 1-NN 0.783 | MMD2 0.0119 (24.2 s)
180
+ 01:21:48 lora5 [R2 raw] AUC knn 0.939 rf 0.940 | 1-NN 0.840 | MMD2 0.0211 (22.2 s)
181
+ 01:22:08 lora5 [R2 dm] AUC knn 0.888 rf 0.910 | 1-NN 0.782 | MMD2 0.0117 (20.8 s)
182
+ 01:22:21 lora5 E_N[pc] sq 1.4202 (LB 195.613 UB 288.174 Dif 327.067) l2 1.4751 (12.3 s)
183
+ 01:24:00 lora5 E_N[all] sq 1.4909 (LB 133.810 UB 204.801 Dif 239.648) l2 1.4363 (98.5 s)
184
+ 01:24:00 lora5 done in 220 s
185
+ 01:24:02 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
186
+ 01:24:27 zs_pseudo [R1 raw] P/C k10 0.9165/0.4853 k5 0.7862/0.3491 k3 0.6429/0.2621 | AUC knn 0.978 rf 0.984 | 1-NN 0.921 | MMD2 0.0295 (24.0 s)
187
+ 01:24:52 zs_pseudo [R1 dm] P/C k10 0.9379/0.7481 k5 0.8400/0.5916 k3 0.7287/0.4665 | AUC knn 0.947 rf 0.965 | 1-NN 0.856 | MMD2 0.0197 (24.2 s)
188
+ 01:25:16 zs_pseudo [R2 raw] AUC knn 0.980 rf 0.985 | 1-NN 0.929 | MMD2 0.0290 (22.5 s)
189
+ 01:25:38 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.967 | 1-NN 0.860 | MMD2 0.0195 (21.9 s)
190
+ 01:25:48 zs_pseudo E_N[pc] sq 1.1696 (LB 169.849 UB 290.574 Dif 311.050) l2 1.2400 (9.8 s)
191
+ 01:27:11 zs_pseudo E_N[all] sq 1.5846 (LB 125.917 UB 204.901 Dif 251.077) l2 1.5363 (82.8 s)
192
+ 01:27:11 zs_pseudo done in 191 s
193
+ 01:27:21 scsemi5: scsemi5__raw.npz sha e0432092ee6c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
194
+ 01:27:48 scsemi5 [R1 raw] P/C k10 0.6612/0.0875 k5 0.4710/0.0622 k3 0.3552/0.0453 | AUC knn 0.997 rf 1.000 | 1-NN 0.990 | MMD2 0.1340 (25.6 s)
195
+ 01:28:12 scsemi5 [R1 dm] P/C k10 0.4913/0.1795 k5 0.3531/0.1169 k3 0.2574/0.0810 | AUC knn 0.995 rf 0.999 | 1-NN 0.980 | MMD2 0.0804 (24.0 s)
196
+ 01:28:35 scsemi5 [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.991 | MMD2 0.1347 (21.9 s)
197
+ 01:28:59 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.981 | MMD2 0.0804 (23.4 s)
198
+ 01:29:10 scsemi5 E_N[pc] sq 2.2501 (LB 128.087 UB 287.447 Dif 486.664) l2 2.0232 (10.8 s)
199
+ 01:30:35 scsemi5 E_N[all] sq 3.6168 (LB 111.646 UB 202.168 Dif 439.048) l2 2.8447 (85.4 s)
200
+ 01:30:35 scsemi5 done in 204 s
201
+ 01:30:35 unit draw3 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw3 in 1302.5 s (k=10 max |diff| vs scorer 0.00e+00)
202
+ 01:30:36 ye2026_sepsis fewshot draw4 : 77 scored samples; fitting the scorer's view
203
+ 01:30:40 bandwidth m (median pairwise distance of R1, PCA-50) = 27.8267
204
+ 01:30:42 observed cells: 544615 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n)
205
+ 01:32:18 real_R2 [R1 raw] P/C k10 0.9807/0.9997 k5 0.9375/0.9863 k3 0.8731/0.9233 | AUC knn 0.515 rf 0.595 | 1-NN 0.506 | MMD2 0.0000 (33.8 s)
206
+ 01:32:53 real_R2 [R1 dm] P/C k10 0.9795/0.9998 k5 0.9348/0.9862 k3 0.8677/0.9256 | AUC knn 0.509 rf 0.595 | 1-NN 0.504 | MMD2 0.0000 (35.1 s)
207
+ 01:33:24 real_R3 [R2 raw] AUC knn 0.500 rf 0.493 | 1-NN 0.502 | MMD2 -0.0000 (28.3 s)
208
+ 01:33:53 real_R3 [R2 dm] AUC knn 0.497 rf 0.493 | 1-NN 0.498 | MMD2 -0.0000 (28.8 s)
209
+ 01:34:05 real_R2 E_N[pc] sq 0.2021 (LB 155.309 UB 309.342 Dif 186.434) l2 0.2176 (12.1 s)
210
+ 01:35:49 real_R2 E_N[all] sq 0.0978 (LB 124.557 UB 213.754 Dif 133.280) l2 0.1044 (83.8 s)
211
+ 01:35:51 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
212
+ 01:36:17 zs_raw [R1 raw] P/C k10 0.6255/0.0769 k5 0.4325/0.0478 k3 0.3143/0.0326 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1841 (24.1 s)
213
+ 01:36:44 zs_raw [R1 dm] P/C k10 0.6037/0.0706 k5 0.4069/0.0452 k3 0.2922/0.0327 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1862 (27.3 s)
214
+ 01:37:05 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1865 (19.4 s)
215
+ 01:37:27 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1885 (21.5 s)
216
+ 01:37:36 zs_raw E_N[pc] sq 13.4577 (LB 239.983 UB 269.109 Dif 631.958) l2 11.0922 (9.3 s)
217
+ 01:38:58 zs_raw E_N[all] sq 5.3768 (LB 140.802 UB 197.184 Dif 443.957) l2 4.2363 (81.1 s)
218
+ 01:38:58 zs_raw done in 189 s
219
+ 01:39:13 zs_cal: zs__cal.npz sha 855d2a44b144 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
220
+ 01:39:40 zs_cal [R1 raw] P/C k10 0.8944/0.4464 k5 0.7428/0.3086 k3 0.5958/0.2292 | AUC knn 0.982 rf 0.986 | 1-NN 0.935 | MMD2 0.0308 (26.1 s)
221
+ 01:40:07 zs_cal [R1 dm] P/C k10 0.9178/0.6819 k5 0.7906/0.5244 k3 0.6570/0.4048 | AUC knn 0.957 rf 0.970 | 1-NN 0.874 | MMD2 0.0228 (27.0 s)
222
+ 01:40:32 zs_cal [R2 raw] AUC knn 0.984 rf 0.987 | 1-NN 0.939 | MMD2 0.0302 (22.2 s)
223
+ 01:40:53 zs_cal [R2 dm] AUC knn 0.960 rf 0.972 | 1-NN 0.883 | MMD2 0.0225 (21.7 s)
224
+ 01:41:03 zs_cal E_N[pc] sq 1.3572 (LB 172.519 UB 296.787 Dif 341.181) l2 1.3986 (9.9 s)
225
+ 01:42:23 zs_cal E_N[all] sq 1.9605 (LB 127.711 UB 201.412 Dif 272.205) l2 1.8310 (79.7 s)
226
+ 01:42:23 zs_cal done in 205 s
227
+ 01:42:40 lora5: lora__raw.npz sha 533fd5b2c48c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
228
+ 01:43:05 lora5 [R1 raw] P/C k10 0.8835/0.6870 k5 0.7468/0.5281 k3 0.6115/0.4098 | AUC knn 0.934 rf 0.939 | 1-NN 0.838 | MMD2 0.0127 (23.4 s)
229
+ 01:43:29 lora5 [R1 dm] P/C k10 0.8947/0.8708 k5 0.7781/0.7250 k3 0.6668/0.5882 | AUC knn 0.873 rf 0.904 | 1-NN 0.767 | MMD2 0.0068 (24.2 s)
230
+ 01:43:52 lora5 [R2 raw] AUC knn 0.933 rf 0.936 | 1-NN 0.832 | MMD2 0.0122 (21.0 s)
231
+ 01:44:14 lora5 [R2 dm] AUC knn 0.868 rf 0.901 | 1-NN 0.764 | MMD2 0.0065 (22.0 s)
232
+ 01:44:25 lora5 E_N[pc] sq 1.2051 (LB 192.090 UB 296.041 Dif 317.362) l2 1.2762 (10.7 s)
233
+ 01:45:49 lora5 E_N[all] sq 1.5020 (LB 133.818 UB 201.525 Dif 235.512) l2 1.4565 (83.6 s)
234
+ 01:45:49 lora5 done in 206 s
235
+ 01:45:51 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
236
+ 01:46:18 zs_pseudo [R1 raw] P/C k10 0.9179/0.4945 k5 0.7839/0.3531 k3 0.6403/0.2646 | AUC knn 0.978 rf 0.983 | 1-NN 0.921 | MMD2 0.0295 (25.4 s)
237
+ 01:46:42 zs_pseudo [R1 dm] P/C k10 0.9350/0.7447 k5 0.8261/0.5869 k3 0.7094/0.4636 | AUC knn 0.946 rf 0.965 | 1-NN 0.857 | MMD2 0.0198 (23.7 s)
238
+ 01:47:06 zs_pseudo [R2 raw] AUC knn 0.981 rf 0.984 | 1-NN 0.930 | MMD2 0.0290 (22.2 s)
239
+ 01:47:29 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.966 | 1-NN 0.864 | MMD2 0.0196 (23.3 s)
240
+ 01:47:39 zs_pseudo E_N[pc] sq 1.1086 (LB 170.183 UB 297.828 Dif 311.685) l2 1.1854 (10.0 s)
241
+ 01:49:05 zs_pseudo E_N[all] sq 1.6743 (LB 127.264 UB 201.592 Dif 251.714) l2 1.6174 (85.3 s)
242
+ 01:49:05 zs_pseudo done in 196 s
243
+ 01:49:14 scsemi5: scsemi5__raw.npz sha 15416b96afca (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer)
244
+ 01:49:39 scsemi5 [R1 raw] P/C k10 0.6630/0.0819 k5 0.4801/0.0582 k3 0.3448/0.0410 | AUC knn 0.997 rf 1.000 | 1-NN 0.990 | MMD2 0.1492 (23.2 s)
245
+ 01:50:04 scsemi5 [R1 dm] P/C k10 0.4236/0.1618 k5 0.2789/0.1003 k3 0.1826/0.0706 | AUC knn 0.996 rf 0.999 | 1-NN 0.983 | MMD2 0.0923 (25.6 s)
246
+ 01:50:26 scsemi5 [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.991 | MMD2 0.1500 (20.4 s)
247
+ 01:50:48 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.982 | MMD2 0.0918 (22.0 s)
248
+ 01:50:58 scsemi5 E_N[pc] sq 2.1687 (LB 123.016 UB 293.469 Dif 492.682) l2 1.9587 (9.3 s)
249
+ 01:52:24 scsemi5 E_N[all] sq 3.7664 (LB 110.628 UB 198.720 Dif 442.413) l2 2.9448 (86.1 s)
250
+ 01:52:24 scsemi5 done in 199 s
251
+ 01:52:24 unit draw4 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw4 in 1308.9 s (k=10 max |diff| vs scorer 0.00e+00)
252
+ JOB_EXIT 0 6653s --design fewshot --dataset ye2026_sepsis --draws 0,1,2,3,4 --threads 6
253
+ JOB_START 2026-10-02T01:52:24+09:00 --design fewshot --dataset imperial_eskd --draws 0,1,2,3,4 --threads 6
254
+ 01:52:25 imperial_eskd fewshot draw0 : 142 scored samples; fitting the scorer's view
255
+ 01:52:36 bandwidth m (median pairwise distance of R1, PCA-50) = 25.8753
256
+ 01:52:42 observed cells: 451540 in 142 samples; R1/R2 rebuilt = reference.npz; R3 20649 cells (6 samples with fewer than n)
257
+ 01:54:49 real_R2 [R1 raw] P/C k10 0.9688/0.9998 k5 0.9142/0.9841 k3 0.8418/0.9170 | AUC knn 0.503 rf 0.560 | 1-NN 0.503 | MMD2 -0.0000 (78.4 s)
258
+ 01:56:07 real_R2 [R1 dm] P/C k10 0.9698/0.9997 k5 0.9133/0.9840 k3 0.8391/0.9165 | AUC knn 0.502 rf 0.558 | 1-NN 0.504 | MMD2 -0.0000 (77.5 s)
259
+ 01:57:19 real_R3 [R2 raw] AUC knn 0.496 rf 0.497 | 1-NN 0.498 | MMD2 -0.0000 (68.7 s)
260
+ 01:58:21 real_R3 [R2 dm] AUC knn 0.499 rf 0.497 | 1-NN 0.498 | MMD2 -0.0000 (62.9 s)
261
+ 01:58:38 real_R2 E_N[pc] sq 0.2234 (LB 188.218 UB 337.666 Dif 221.600) l2 0.2383 (16.5 s)
262
+ 01:59:58 real_R2 E_N[all] sq 0.2483 (LB 154.038 UB 280.649 Dif 185.477) l2 0.2702 (59.6 s)
263
+ 01:59:59 fetching generated/imperial_eskd/fewshot_n5/zs__raw_all.npz (6.49 GiB) from spark-0110
264
+ 02:01:07 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer)
265
+ 02:02:07 zs_raw [R1 raw] P/C k10 0.5056/0.1078 k5 0.3157/0.0686 k3 0.2213/0.0475 | AUC knn 0.995 rf 0.998 | 1-NN 0.981 | MMD2 0.2477 (57.3 s)
266
+ 02:03:05 zs_raw [R1 dm] P/C k10 0.5768/0.1412 k5 0.3745/0.0907 k3 0.2475/0.0643 | AUC knn 0.995 rf 0.997 | 1-NN 0.974 | MMD2 0.2294 (57.5 s)
267
+ 02:03:59 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.982 | MMD2 0.2497 (51.4 s)
268
+ 02:04:55 zs_raw [R2 dm] AUC knn 0.994 rf 0.997 | 1-NN 0.976 | MMD2 0.2309 (56.6 s)
269
+ 02:05:12 zs_raw E_N[pc] sq 6.6095 (LB 237.626 UB 298.773 Dif 641.785) l2 5.0357 (16.1 s)
270
+ 02:06:38 zs_raw E_N[all] sq 4.4811 (LB 174.654 UB 245.642 Dif 492.759) l2 3.4887 (84.5 s)
271
+ 02:06:38 zs_raw done in 399 s
272
+ 02:06:38 fetching generated/imperial_eskd/fewshot_n5/draw0/zs__cal.npz (5.31 GiB) from spark-0110
273
+ 02:07:31 zs_cal: zs__cal.npz sha fd62239004a2 (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer)
274
+ 02:08:33 zs_cal [R1 raw] P/C k10 0.8497/0.6424 k5 0.7299/0.4919 k3 0.6128/0.3779 | AUC knn 0.956 rf 0.966 | 1-NN 0.870 | MMD2 0.0209 (59.6 s)
275
+ 02:09:32 zs_cal [R1 dm] P/C k10 0.8755/0.6953 k5 0.7694/0.5416 k3 0.6630/0.4248 | AUC knn 0.948 rf 0.965 | 1-NN 0.858 | MMD2 0.0233 (58.4 s)
276
+ 02:10:25 zs_cal [R2 raw] AUC knn 0.958 rf 0.967 | 1-NN 0.875 | MMD2 0.0206 (50.7 s)
277
+ 02:11:16 zs_cal [R2 dm] AUC knn 0.948 rf 0.965 | 1-NN 0.861 | MMD2 0.0232 (51.0 s)
278
+ 02:11:34 zs_cal E_N[pc] sq 1.1316 (LB 202.278 UB 325.255 Dif 341.433) l2 1.1268 (17.8 s)
279
+ 02:12:59 zs_cal E_N[all] sq 1.2279 (LB 160.798 UB 255.342 Dif 276.888) l2 1.2052 (83.5 s)
280
+ 02:12:59 zs_cal done in 381 s
281
+ 02:12:59 fetching generated/imperial_eskd/fewshot_n5/draw0/lora__raw.npz (5.24 GiB) from spark-0110
282
+ 02:13:52 lora5: lora__raw.npz sha aa39dce41968 (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer)
283
+ 02:14:48 lora5 [R1 raw] P/C k10 0.8608/0.7570 k5 0.7354/0.6066 k3 0.6170/0.4821 | AUC knn 0.911 rf 0.920 | 1-NN 0.804 | MMD2 0.0140 (54.0 s)
284
+ 02:15:48 lora5 [R1 dm] P/C k10 0.8882/0.8848 k5 0.7746/0.7409 k3 0.6631/0.6040 | AUC knn 0.882 rf 0.903 | 1-NN 0.760 | MMD2 0.0103 (60.2 s)
285
+ 02:16:42 lora5 [R2 raw] AUC knn 0.917 rf 0.917 | 1-NN 0.803 | MMD2 0.0140 (50.3 s)
286
+ 02:17:33 lora5 [R2 dm] AUC knn 0.883 rf 0.901 | 1-NN 0.762 | MMD2 0.0103 (51.3 s)
287
+ 02:17:49 lora5 E_N[pc] sq 1.2614 (LB 223.836 UB 323.581 Dif 349.658) l2 1.2506 (16.4 s)
288
+ 02:19:12 lora5 E_N[all] sq 1.2995 (LB 172.676 UB 255.090 Dif 279.770) l2 1.2706 (81.6 s)
289
+ 02:19:12 lora5 done in 373 s
290
+ 02:19:13 fetching generated/imperial_eskd/fewshot_n5/zs__pseudo_all.npz (5.87 GiB) from spark-0110
291
+ 02:20:12 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer)
292
+ 02:21:14 zs_pseudo [R1 raw] P/C k10 0.8479/0.7113 k5 0.7129/0.5466 k3 0.5901/0.4248 | AUC knn 0.955 rf 0.965 | 1-NN 0.860 | MMD2 0.0173 (59.5 s)
293
+ 02:22:13 zs_pseudo [R1 dm] P/C k10 0.8891/0.7415 k5 0.7760/0.5817 k3 0.6692/0.4613 | AUC knn 0.945 rf 0.966 | 1-NN 0.845 | MMD2 0.0186 (59.2 s)
294
+ 02:23:06 zs_pseudo [R2 raw] AUC knn 0.958 rf 0.964 | 1-NN 0.869 | MMD2 0.0171 (49.4 s)
295
+ 02:23:59 zs_pseudo [R2 dm] AUC knn 0.947 rf 0.966 | 1-NN 0.852 | MMD2 0.0186 (53.5 s)
296
+ 02:24:15 zs_pseudo E_N[pc] sq 0.9940 (LB 197.027 UB 325.263 Dif 324.498) l2 0.9971 (15.7 s)
297
+ 02:25:37 zs_pseudo E_N[all] sq 1.1175 (LB 158.543 UB 255.452 Dif 266.841) l2 1.1049 (80.5 s)
298
+ 02:25:37 zs_pseudo done in 385 s
299
+ 02:25:37 fetching generated/imperial_eskd/fewshot_n5/draw0/scsemi5__raw.npz (0.14 GiB) from spark-0110
300
+ 02:25:57 scsemi5: scsemi5__raw.npz sha fe0c72e4fc0f (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer)
301
+ 02:26:55 scsemi5 [R1 raw] P/C k10 0.3751/0.0734 k5 0.2247/0.0468 k3 0.1507/0.0322 | AUC knn 0.999 rf 1.000 | 1-NN 0.992 | MMD2 0.1272 (56.4 s)
302
+ 02:28:00 scsemi5 [R1 dm] P/C k10 0.4896/0.1795 k5 0.3278/0.1109 k3 0.2312/0.0753 | AUC knn 0.996 rf 0.999 | 1-NN 0.984 | MMD2 0.1005 (64.5 s)
303
+ 02:28:54 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.994 | MMD2 0.1271 (51.5 s)
304
+ 02:29:51 scsemi5 [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.984 | MMD2 0.1000 (56.8 s)
305
+ 02:30:12 scsemi5 E_N[pc] sq 1.6917 (LB 141.451 UB 320.823 Dif 444.903) l2 1.5388 (20.9 s)
306
+ 02:31:34 scsemi5 E_N[all] sq 2.0702 (LB 121.281 UB 251.776 Dif 391.431) l2 1.7835 (82.3 s)
307
+ 02:31:34 scsemi5 done in 358 s
308
+ 02:31:34 unit draw0 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw0 in 2349.5 s (k=10 max |diff| vs scorer 0.00e+00)
309
+ 02:31:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw0/zs__cal.npz
310
+ 02:31:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw0/lora__raw.npz
311
+ 02:31:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw0/scsemi5__raw.npz
312
+ 02:31:35 imperial_eskd fewshot draw1 : 143 scored samples; fitting the scorer's view
313
+ 02:31:45 bandwidth m (median pairwise distance of R1, PCA-50) = 26.0236
314
+ 02:31:48 observed cells: 477707 in 143 samples; R1/R2 rebuilt = reference.npz; R3 20906 cells (5 samples with fewer than n)
315
+ 02:33:57 real_R2 [R1 raw] P/C k10 0.9685/0.9998 k5 0.9147/0.9850 k3 0.8428/0.9195 | AUC knn 0.501 rf 0.559 | 1-NN 0.502 | MMD2 -0.0000 (78.6 s)
316
+ 02:35:15 real_R2 [R1 dm] P/C k10 0.9689/0.9996 k5 0.9140/0.9853 k3 0.8421/0.9197 | AUC knn 0.501 rf 0.563 | 1-NN 0.503 | MMD2 -0.0000 (77.6 s)
317
+ 02:36:25 real_R3 [R2 raw] AUC knn 0.503 rf 0.508 | 1-NN 0.498 | MMD2 -0.0000 (68.0 s)
318
+ 02:37:30 real_R3 [R2 dm] AUC knn 0.500 rf 0.503 | 1-NN 0.499 | MMD2 -0.0000 (65.1 s)
319
+ 02:37:49 real_R2 E_N[pc] sq 0.2362 (LB 188.767 UB 333.360 Dif 222.914) l2 0.2537 (18.0 s)
320
+ 02:39:13 real_R2 E_N[all] sq 0.2715 (LB 154.380 UB 270.598 Dif 185.937) l2 0.2929 (63.5 s)
321
+ 02:39:22 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer)
322
+ 02:40:26 zs_raw [R1 raw] P/C k10 0.4785/0.1158 k5 0.3002/0.0725 k3 0.2032/0.0496 | AUC knn 0.995 rf 0.997 | 1-NN 0.980 | MMD2 0.2390 (61.2 s)
323
+ 02:41:26 zs_raw [R1 dm] P/C k10 0.5362/0.1531 k5 0.3283/0.0989 k3 0.2250/0.0705 | AUC knn 0.994 rf 0.996 | 1-NN 0.972 | MMD2 0.2201 (60.0 s)
324
+ 02:42:21 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.980 | MMD2 0.2406 (52.4 s)
325
+ 02:43:12 zs_raw [R2 dm] AUC knn 0.994 rf 0.996 | 1-NN 0.973 | MMD2 0.2211 (51.4 s)
326
+ 02:43:32 zs_raw E_N[pc] sq 6.7972 (LB 236.549 UB 295.417 Dif 636.682) l2 5.2870 (19.3 s)
327
+ 02:45:06 zs_raw E_N[all] sq 4.1221 (LB 174.081 UB 249.663 Dif 485.637) l2 3.2708 (92.9 s)
328
+ 02:45:06 zs_raw done in 353 s
329
+ 02:45:07 fetching generated/imperial_eskd/fewshot_n5/draw1/zs__cal.npz (5.31 GiB) from spark-0110
330
+ 02:46:00 zs_cal: zs__cal.npz sha ef4e504f218a (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer)
331
+ 02:47:00 zs_cal [R1 raw] P/C k10 0.8434/0.6338 k5 0.7133/0.4866 k3 0.5853/0.3736 | AUC knn 0.959 rf 0.969 | 1-NN 0.874 | MMD2 0.0218 (57.4 s)
332
+ 02:48:01 zs_cal [R1 dm] P/C k10 0.8659/0.6824 k5 0.7503/0.5274 k3 0.6412/0.4127 | AUC knn 0.951 rf 0.967 | 1-NN 0.858 | MMD2 0.0225 (61.3 s)
333
+ 02:48:54 zs_cal [R2 raw] AUC knn 0.962 rf 0.968 | 1-NN 0.876 | MMD2 0.0216 (49.6 s)
334
+ 02:49:43 zs_cal [R2 dm] AUC knn 0.954 rf 0.968 | 1-NN 0.866 | MMD2 0.0226 (49.7 s)
335
+ 02:50:03 zs_cal E_N[pc] sq 1.1674 (LB 201.683 UB 320.645 Dif 340.554) l2 1.1725 (19.3 s)
336
+ 02:51:32 zs_cal E_N[all] sq 1.1771 (LB 160.477 UB 258.802 Dif 276.212) l2 1.1678 (88.4 s)
337
+ 02:51:32 zs_cal done in 386 s
338
+ 02:51:33 fetching generated/imperial_eskd/fewshot_n5/draw1/lora__raw.npz (5.25 GiB) from spark-0110
339
+ 02:52:26 lora5: lora__raw.npz sha 9664e2cfd990 (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer)
340
+ 02:53:24 lora5 [R1 raw] P/C k10 0.8450/0.7829 k5 0.7144/0.6230 k3 0.5990/0.4926 | AUC knn 0.907 rf 0.910 | 1-NN 0.790 | MMD2 0.0155 (55.5 s)
341
+ 02:54:21 lora5 [R1 dm] P/C k10 0.8829/0.8706 k5 0.7713/0.7289 k3 0.6595/0.5958 | AUC knn 0.875 rf 0.903 | 1-NN 0.757 | MMD2 0.0105 (56.6 s)
342
+ 02:55:17 lora5 [R2 raw] AUC knn 0.910 rf 0.908 | 1-NN 0.791 | MMD2 0.0153 (53.8 s)
343
+ 02:56:13 lora5 [R2 dm] AUC knn 0.876 rf 0.902 | 1-NN 0.761 | MMD2 0.0106 (56.2 s)
344
+ 02:56:36 lora5 E_N[pc] sq 1.1317 (LB 216.753 UB 321.146 Dif 334.896) l2 1.1602 (22.3 s)
345
+ 02:58:04 lora5 E_N[all] sq 1.1331 (LB 169.375 UB 259.372 Dif 271.348) l2 1.1341 (87.0 s)
346
+ 02:58:04 lora5 done in 392 s
347
+ 02:58:11 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer)
348
+ 02:59:10 zs_pseudo [R1 raw] P/C k10 0.8395/0.7062 k5 0.7071/0.5418 k3 0.5837/0.4230 | AUC knn 0.956 rf 0.966 | 1-NN 0.863 | MMD2 0.0174 (57.1 s)
349
+ 03:00:13 zs_pseudo [R1 dm] P/C k10 0.8817/0.7344 k5 0.7698/0.5771 k3 0.6568/0.4544 | AUC knn 0.948 rf 0.968 | 1-NN 0.852 | MMD2 0.0189 (62.6 s)
350
+ 03:01:05 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.966 | 1-NN 0.870 | MMD2 0.0172 (48.8 s)
351
+ 03:01:55 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.968 | 1-NN 0.854 | MMD2 0.0190 (50.7 s)
352
+ 03:02:12 zs_pseudo E_N[pc] sq 1.0375 (LB 197.510 UB 320.957 Dif 325.588) l2 1.0481 (16.6 s)
353
+ 03:03:47 zs_pseudo E_N[all] sq 1.0794 (LB 158.750 UB 258.758 Dif 266.699) l2 1.0775 (94.4 s)
354
+ 03:03:47 zs_pseudo done in 344 s
355
+ 03:03:48 fetching generated/imperial_eskd/fewshot_n5/draw1/scsemi5__raw.npz (0.14 GiB) from spark-0110
356
+ 03:04:08 scsemi5: scsemi5__raw.npz sha 184060f4ddf0 (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer)
357
+ 03:05:08 scsemi5 [R1 raw] P/C k10 0.3175/0.0635 k5 0.1713/0.0400 k3 0.1018/0.0283 | AUC knn 0.999 rf 1.000 | 1-NN 0.994 | MMD2 0.1380 (58.2 s)
358
+ 03:06:11 scsemi5 [R1 dm] P/C k10 0.4437/0.1411 k5 0.3002/0.0880 k3 0.2135/0.0600 | AUC knn 0.997 rf 1.000 | 1-NN 0.987 | MMD2 0.1186 (63.1 s)
359
+ 03:07:06 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.1377 (52.8 s)
360
+ 03:08:04 scsemi5 [R2 dm] AUC knn 0.997 rf 1.000 | 1-NN 0.988 | MMD2 0.1188 (57.8 s)
361
+ 03:08:24 scsemi5 E_N[pc] sq 1.6150 (LB 141.573 UB 321.051 Dif 431.432) l2 1.4971 (19.5 s)
362
+ 03:09:52 scsemi5 E_N[all] sq 1.9233 (LB 121.126 UB 257.210 Dif 382.852) l2 1.6842 (87.4 s)
363
+ 03:09:52 scsemi5 done in 364 s
364
+ 03:09:52 unit draw1 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw1 in 2296.8 s (k=10 max |diff| vs scorer 0.00e+00)
365
+ 03:09:52 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw1/zs__cal.npz
366
+ 03:09:52 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw1/lora__raw.npz
367
+ 03:09:52 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw1/scsemi5__raw.npz
368
+ 03:09:52 imperial_eskd fewshot draw2 : 142 scored samples; fitting the scorer's view
369
+ 03:10:00 bandwidth m (median pairwise distance of R1, PCA-50) = 25.7357
370
+ 03:10:02 observed cells: 480410 in 142 samples; R1/R2 rebuilt = reference.npz; R3 20606 cells (6 samples with fewer than n)
371
+ 03:11:58 real_R2 [R1 raw] P/C k10 0.9694/0.9998 k5 0.9137/0.9851 k3 0.8395/0.9205 | AUC knn 0.503 rf 0.559 | 1-NN 0.504 | MMD2 -0.0000 (74.9 s)
372
+ 03:13:18 real_R2 [R1 dm] P/C k10 0.9690/0.9997 k5 0.9139/0.9838 k3 0.8405/0.9190 | AUC knn 0.502 rf 0.560 | 1-NN 0.502 | MMD2 -0.0000 (79.9 s)
373
+ 03:14:24 real_R3 [R2 raw] AUC knn 0.498 rf 0.502 | 1-NN 0.501 | MMD2 -0.0000 (63.0 s)
374
+ 03:15:26 real_R3 [R2 dm] AUC knn 0.495 rf 0.498 | 1-NN 0.501 | MMD2 -0.0000 (62.0 s)
375
+ 03:15:41 real_R2 E_N[pc] sq 0.2386 (LB 186.033 UB 326.849 Dif 219.625) l2 0.2557 (15.1 s)
376
+ 03:17:14 real_R2 E_N[all] sq 0.2682 (LB 152.000 UB 267.622 Dif 183.004) l2 0.2880 (72.7 s)
377
+ 03:17:25 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer)
378
+ 03:18:24 zs_raw [R1 raw] P/C k10 0.4893/0.1115 k5 0.3028/0.0700 k3 0.2142/0.0488 | AUC knn 0.996 rf 0.997 | 1-NN 0.980 | MMD2 0.2402 (56.1 s)
379
+ 03:19:21 zs_raw [R1 dm] P/C k10 0.5244/0.1493 k5 0.3255/0.0967 k3 0.2224/0.0677 | AUC knn 0.994 rf 0.996 | 1-NN 0.973 | MMD2 0.2220 (57.8 s)
380
+ 03:20:17 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.980 | MMD2 0.2424 (52.5 s)
381
+ 03:21:14 zs_raw [R2 dm] AUC knn 0.995 rf 0.997 | 1-NN 0.974 | MMD2 0.2237 (57.2 s)
382
+ 03:21:34 zs_raw E_N[pc] sq 7.5197 (LB 235.697 UB 289.142 Dif 637.587) l2 5.7755 (19.2 s)
383
+ 03:22:58 zs_raw E_N[all] sq 4.3781 (LB 172.423 UB 244.059 Dif 486.058) l2 3.4398 (83.5 s)
384
+ 03:22:58 zs_raw done in 345 s
385
+ 03:22:59 fetching generated/imperial_eskd/fewshot_n5/draw2/zs__cal.npz (5.30 GiB) from spark-0110
386
+ 03:23:53 zs_cal: zs__cal.npz sha afec06917876 (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer)
387
+ 03:24:55 zs_cal [R1 raw] P/C k10 0.8570/0.6349 k5 0.7357/0.4874 k3 0.6184/0.3798 | AUC knn 0.954 rf 0.965 | 1-NN 0.867 | MMD2 0.0230 (59.8 s)
388
+ 03:25:53 zs_cal [R1 dm] P/C k10 0.8774/0.6786 k5 0.7691/0.5302 k3 0.6668/0.4158 | AUC knn 0.946 rf 0.964 | 1-NN 0.857 | MMD2 0.0255 (57.4 s)
389
+ 03:26:43 zs_cal [R2 raw] AUC knn 0.958 rf 0.965 | 1-NN 0.873 | MMD2 0.0227 (48.1 s)
390
+ 03:27:34 zs_cal [R2 dm] AUC knn 0.950 rf 0.965 | 1-NN 0.864 | MMD2 0.0254 (50.4 s)
391
+ 03:27:50 zs_cal E_N[pc] sq 1.2089 (LB 202.175 UB 314.398 Dif 337.836) l2 1.2208 (15.9 s)
392
+ 03:29:48 zs_cal E_N[all] sq 1.2300 (LB 160.383 UB 253.233 Dif 274.590) l2 1.2175 (117.7 s)
393
+ 03:29:48 zs_cal done in 410 s
394
+ 03:29:49 fetching generated/imperial_eskd/fewshot_n5/draw2/lora__raw.npz (5.16 GiB) from spark-0110
395
+ 03:30:44 lora5: lora__raw.npz sha 207a9e5ba0cb (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer)
396
+ 03:31:44 lora5 [R1 raw] P/C k10 0.8454/0.6650 k5 0.7137/0.5251 k3 0.5998/0.4208 | AUC knn 0.921 rf 0.925 | 1-NN 0.819 | MMD2 0.0189 (58.3 s)
397
+ 03:32:44 lora5 [R1 dm] P/C k10 0.8740/0.8675 k5 0.7603/0.7269 k3 0.6566/0.5879 | AUC knn 0.868 rf 0.895 | 1-NN 0.753 | MMD2 0.0081 (59.4 s)
398
+ 03:33:37 lora5 [R2 raw] AUC knn 0.926 rf 0.922 | 1-NN 0.819 | MMD2 0.0188 (50.5 s)
399
+ 03:34:29 lora5 [R2 dm] AUC knn 0.873 rf 0.895 | 1-NN 0.757 | MMD2 0.0083 (51.9 s)
400
+ 03:34:50 lora5 E_N[pc] sq 1.4185 (LB 222.335 UB 314.035 Dif 352.412) l2 1.4322 (21.4 s)
401
+ 03:36:10 lora5 E_N[all] sq 1.4039 (LB 171.752 UB 253.401 Dif 286.382) l2 1.3724 (79.2 s)
402
+ 03:36:10 lora5 done in 382 s
403
+ 03:36:16 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer)
404
+ 03:37:14 zs_pseudo [R1 raw] P/C k10 0.8389/0.6944 k5 0.7039/0.5349 k3 0.5820/0.4116 | AUC knn 0.956 rf 0.967 | 1-NN 0.864 | MMD2 0.0177 (54.7 s)
405
+ 03:38:14 zs_pseudo [R1 dm] P/C k10 0.8811/0.7309 k5 0.7717/0.5734 k3 0.6625/0.4535 | AUC knn 0.946 rf 0.967 | 1-NN 0.849 | MMD2 0.0190 (60.0 s)
406
+ 03:39:07 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.967 | 1-NN 0.873 | MMD2 0.0175 (50.7 s)
407
+ 03:39:57 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.968 | 1-NN 0.853 | MMD2 0.0189 (49.9 s)
408
+ 03:40:15 zs_pseudo E_N[pc] sq 1.0748 (LB 196.320 UB 314.807 Dif 323.674) l2 1.0814 (17.4 s)
409
+ 03:41:47 zs_pseudo E_N[all] sq 1.1231 (LB 157.551 UB 252.992 Dif 264.738) l2 1.1154 (91.2 s)
410
+ 03:41:47 zs_pseudo done in 337 s
411
+ 03:41:47 fetching generated/imperial_eskd/fewshot_n5/draw2/scsemi5__raw.npz (0.16 GiB) from spark-0110
412
+ 03:42:07 scsemi5: scsemi5__raw.npz sha 56d727776441 (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer)
413
+ 03:43:05 scsemi5 [R1 raw] P/C k10 0.3373/0.0597 k5 0.1971/0.0365 k3 0.1322/0.0246 | AUC knn 0.999 rf 1.000 | 1-NN 0.994 | MMD2 0.1317 (55.3 s)
414
+ 03:44:05 scsemi5 [R1 dm] P/C k10 0.4142/0.1705 k5 0.2723/0.1045 k3 0.1862/0.0700 | AUC knn 0.998 rf 0.999 | 1-NN 0.985 | MMD2 0.1095 (60.3 s)
415
+ 03:45:02 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.1315 (54.5 s)
416
+ 03:45:58 scsemi5 [R2 dm] AUC knn 0.998 rf 0.999 | 1-NN 0.985 | MMD2 0.1093 (55.7 s)
417
+ 03:46:14 scsemi5 E_N[pc] sq 1.7913 (LB 152.976 UB 312.531 Dif 438.782) l2 1.6652 (16.4 s)
418
+ 03:47:37 scsemi5 E_N[all] sq 2.1236 (LB 128.422 UB 250.788 Dif 388.280) l2 1.8685 (82.5 s)
419
+ 03:47:37 scsemi5 done in 350 s
420
+ 03:47:37 unit draw2 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw2 in 2265.1 s (k=10 max |diff| vs scorer 0.00e+00)
421
+ 03:47:37 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw2/zs__cal.npz
422
+ 03:47:38 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw2/lora__raw.npz
423
+ 03:47:38 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw2/scsemi5__raw.npz
424
+ 03:47:38 imperial_eskd fewshot draw3 : 145 scored samples; fitting the scorer's view
425
+ 03:47:47 bandwidth m (median pairwise distance of R1, PCA-50) = 25.8298
426
+ 03:47:50 observed cells: 479793 in 145 samples; R1/R2 rebuilt = reference.npz; R3 20950 cells (7 samples with fewer than n)
427
+ 03:50:08 real_R2 [R1 raw] P/C k10 0.9691/0.9998 k5 0.9162/0.9851 k3 0.8416/0.9188 | AUC knn 0.499 rf 0.562 | 1-NN 0.505 | MMD2 -0.0000 (78.8 s)
428
+ 03:51:26 real_R2 [R1 dm] P/C k10 0.9693/0.9997 k5 0.9140/0.9851 k3 0.8424/0.9220 | AUC knn 0.500 rf 0.559 | 1-NN 0.505 | MMD2 -0.0000 (77.7 s)
429
+ 03:52:39 real_R3 [R2 raw] AUC knn 0.495 rf 0.501 | 1-NN 0.499 | MMD2 -0.0000 (70.7 s)
430
+ 03:53:46 real_R3 [R2 dm] AUC knn 0.499 rf 0.502 | 1-NN 0.497 | MMD2 -0.0000 (66.7 s)
431
+ 03:54:03 real_R2 E_N[pc] sq 0.2345 (LB 189.001 UB 336.466 Dif 223.578) l2 0.2504 (16.9 s)
432
+ 03:55:36 real_R2 E_N[all] sq 0.2598 (LB 154.331 UB 280.967 Dif 187.236) l2 0.2807 (69.1 s)
433
+ 03:55:45 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer)
434
+ 03:56:49 zs_raw [R1 raw] P/C k10 0.5133/0.1170 k5 0.3349/0.0727 k3 0.2434/0.0508 | AUC knn 0.995 rf 0.997 | 1-NN 0.979 | MMD2 0.2381 (61.4 s)
435
+ 03:57:51 zs_raw [R1 dm] P/C k10 0.5792/0.1565 k5 0.3884/0.0989 k3 0.2630/0.0707 | AUC knn 0.994 rf 0.996 | 1-NN 0.972 | MMD2 0.2191 (61.3 s)
436
+ 03:58:49 zs_raw [R2 raw] AUC knn 0.995 rf 0.997 | 1-NN 0.981 | MMD2 0.2391 (55.2 s)
437
+ 03:59:44 zs_raw [R2 dm] AUC knn 0.994 rf 0.996 | 1-NN 0.974 | MMD2 0.2197 (54.5 s)
438
+ 04:00:02 zs_raw E_N[pc] sq 6.4142 (LB 236.342 UB 298.167 Dif 632.906) l2 4.9440 (18.7 s)
439
+ 04:01:35 zs_raw E_N[all] sq 4.2238 (LB 173.698 UB 247.535 Dif 485.570) l2 3.3112 (91.0 s)
440
+ 04:01:35 zs_raw done in 358 s
441
+ 04:01:36 fetching generated/imperial_eskd/fewshot_n5/draw3/zs__cal.npz (5.36 GiB) from spark-0110
442
+ 04:02:28 zs_cal: zs__cal.npz sha 84eb43ca625f (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer)
443
+ 04:03:29 zs_cal [R1 raw] P/C k10 0.8423/0.6254 k5 0.7114/0.4758 k3 0.5889/0.3652 | AUC knn 0.961 rf 0.970 | 1-NN 0.877 | MMD2 0.0250 (58.6 s)
444
+ 04:04:29 zs_cal [R1 dm] P/C k10 0.8670/0.6775 k5 0.7559/0.5161 k3 0.6452/0.4045 | AUC knn 0.952 rf 0.970 | 1-NN 0.866 | MMD2 0.0260 (59.8 s)
445
+ 04:05:25 zs_cal [R2 raw] AUC knn 0.965 rf 0.970 | 1-NN 0.885 | MMD2 0.0248 (53.0 s)
446
+ 04:06:16 zs_cal [R2 dm] AUC knn 0.954 rf 0.970 | 1-NN 0.870 | MMD2 0.0263 (51.3 s)
447
+ 04:06:36 zs_cal E_N[pc] sq 1.1520 (LB 203.580 UB 323.966 Dif 342.265) l2 1.1539 (19.6 s)
448
+ 04:08:10 zs_cal E_N[all] sq 1.2339 (LB 161.996 UB 256.757 Dif 278.926) l2 1.2108 (92.4 s)
449
+ 04:08:10 zs_cal done in 395 s
450
+ 04:08:10 fetching generated/imperial_eskd/fewshot_n5/draw3/lora__raw.npz (5.39 GiB) from spark-0110
451
+ 04:09:06 lora5: lora__raw.npz sha b4a12bcba3b3 (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer)
452
+ 04:10:07 lora5 [R1 raw] P/C k10 0.8802/0.8427 k5 0.7701/0.6941 k3 0.6570/0.5577 | AUC knn 0.901 rf 0.903 | 1-NN 0.783 | MMD2 0.0084 (58.6 s)
453
+ 04:11:04 lora5 [R1 dm] P/C k10 0.9078/0.9036 k5 0.8067/0.7724 k3 0.7063/0.6317 | AUC knn 0.876 rf 0.900 | 1-NN 0.755 | MMD2 0.0079 (57.4 s)
454
+ 04:11:59 lora5 [R2 raw] AUC knn 0.906 rf 0.901 | 1-NN 0.787 | MMD2 0.0082 (52.0 s)
455
+ 04:12:50 lora5 [R2 dm] AUC knn 0.878 rf 0.900 | 1-NN 0.758 | MMD2 0.0079 (51.1 s)
456
+ 04:13:09 lora5 E_N[pc] sq 1.0361 (LB 212.570 UB 323.919 Dif 327.934) l2 1.0505 (18.6 s)
457
+ 04:14:43 lora5 E_N[all] sq 1.1083 (LB 167.685 UB 256.947 Dif 266.618) l2 1.0975 (93.2 s)
458
+ 04:14:43 lora5 done in 394 s
459
+ 04:14:50 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer)
460
+ 04:15:44 zs_pseudo [R1 raw] P/C k10 0.8397/0.7055 k5 0.7041/0.5457 k3 0.5833/0.4218 | AUC knn 0.956 rf 0.967 | 1-NN 0.862 | MMD2 0.0178 (52.5 s)
461
+ 04:16:45 zs_pseudo [R1 dm] P/C k10 0.8790/0.7334 k5 0.7660/0.5750 k3 0.6633/0.4517 | AUC knn 0.947 rf 0.968 | 1-NN 0.852 | MMD2 0.0194 (60.4 s)
462
+ 04:17:38 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.967 | 1-NN 0.870 | MMD2 0.0176 (50.8 s)
463
+ 04:18:31 zs_pseudo [R2 dm] AUC knn 0.950 rf 0.968 | 1-NN 0.856 | MMD2 0.0193 (52.1 s)
464
+ 04:18:48 zs_pseudo E_N[pc] sq 1.0136 (LB 197.363 UB 324.106 Dif 325.823) l2 1.0172 (17.2 s)
465
+ 04:20:20 zs_pseudo E_N[all] sq 1.1118 (LB 158.690 UB 256.510 Dif 267.443) l2 1.0982 (91.2 s)
466
+ 04:20:20 zs_pseudo done in 337 s
467
+ 04:20:21 fetching generated/imperial_eskd/fewshot_n5/draw3/scsemi5__raw.npz (0.15 GiB) from spark-0110
468
+ 04:20:42 scsemi5: scsemi5__raw.npz sha dada388bc27a (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer)
469
+ 04:21:43 scsemi5 [R1 raw] P/C k10 0.2963/0.0439 k5 0.1485/0.0268 k3 0.0852/0.0182 | AUC knn 0.999 rf 1.000 | 1-NN 0.997 | MMD2 0.1453 (58.9 s)
470
+ 04:22:41 scsemi5 [R1 dm] P/C k10 0.4287/0.1403 k5 0.3032/0.0858 k3 0.2113/0.0575 | AUC knn 0.998 rf 1.000 | 1-NN 0.989 | MMD2 0.1275 (57.5 s)
471
+ 04:23:36 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.997 | MMD2 0.1453 (53.1 s)
472
+ 04:24:31 scsemi5 [R2 dm] AUC knn 0.997 rf 1.000 | 1-NN 0.988 | MMD2 0.1271 (54.6 s)
473
+ 04:24:48 scsemi5 E_N[pc] sq 1.6110 (LB 138.518 UB 326.157 Dif 440.810) l2 1.4700 (17.2 s)
474
+ 04:26:07 scsemi5 E_N[all] sq 2.0510 (LB 120.256 UB 254.958 Dif 396.529) l2 1.7454 (78.4 s)
475
+ 04:26:07 scsemi5 done in 347 s
476
+ 04:26:07 unit draw3 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw3 in 2309.4 s (k=10 max |diff| vs scorer 0.00e+00)
477
+ 04:26:07 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw3/zs__cal.npz
478
+ 04:26:08 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw3/lora__raw.npz
479
+ 04:26:08 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw3/scsemi5__raw.npz
480
+ 04:26:08 imperial_eskd fewshot draw4 : 143 scored samples; fitting the scorer's view
481
+ 04:26:17 bandwidth m (median pairwise distance of R1, PCA-50) = 26.3136
482
+ 04:26:21 observed cells: 477903 in 143 samples; R1/R2 rebuilt = reference.npz; R3 20705 cells (6 samples with fewer than n)
483
+ 04:28:30 real_R2 [R1 raw] P/C k10 0.9696/0.9998 k5 0.9146/0.9861 k3 0.8436/0.9209 | AUC knn 0.502 rf 0.560 | 1-NN 0.503 | MMD2 -0.0000 (74.4 s)
484
+ 04:29:44 real_R2 [R1 dm] P/C k10 0.9684/0.9997 k5 0.9149/0.9853 k3 0.8430/0.9181 | AUC knn 0.503 rf 0.559 | 1-NN 0.502 | MMD2 -0.0000 (74.1 s)
485
+ 04:30:52 real_R3 [R2 raw] AUC knn 0.497 rf 0.498 | 1-NN 0.497 | MMD2 -0.0000 (65.7 s)
486
+ 04:31:57 real_R3 [R2 dm] AUC knn 0.496 rf 0.493 | 1-NN 0.499 | MMD2 -0.0000 (64.7 s)
487
+ 04:32:12 real_R2 E_N[pc] sq 0.2321 (LB 186.070 UB 331.148 Dif 219.748) l2 0.2512 (15.0 s)
488
+ 04:33:49 real_R2 E_N[all] sq 0.2512 (LB 152.180 UB 276.267 Dif 183.348) l2 0.2733 (71.7 s)
489
+ 04:33:57 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer)
490
+ 04:34:55 zs_raw [R1 raw] P/C k10 0.5149/0.1162 k5 0.3180/0.0715 k3 0.2234/0.0492 | AUC knn 0.995 rf 0.997 | 1-NN 0.980 | MMD2 0.2398 (55.9 s)
491
+ 04:35:48 zs_raw [R1 dm] P/C k10 0.5870/0.1563 k5 0.3792/0.0984 k3 0.2700/0.0688 | AUC knn 0.994 rf 0.996 | 1-NN 0.974 | MMD2 0.2217 (52.6 s)
492
+ 04:36:39 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.980 | MMD2 0.2409 (48.4 s)
493
+ 04:37:27 zs_raw [R2 dm] AUC knn 0.994 rf 0.997 | 1-NN 0.972 | MMD2 0.2221 (47.3 s)
494
+ 04:37:41 zs_raw E_N[pc] sq 6.8776 (LB 235.614 UB 293.664 Dif 634.857) l2 5.4497 (14.1 s)
495
+ 04:38:48 zs_raw E_N[all] sq 4.1814 (LB 172.291 UB 247.043 Dif 484.856) l2 3.2915 (65.7 s)
496
+ 04:38:48 zs_raw done in 298 s
497
+ 04:38:49 fetching generated/imperial_eskd/fewshot_n5/draw4/zs__cal.npz (5.34 GiB) from spark-0110
498
+ 04:39:41 zs_cal: zs__cal.npz sha 480dfa29352e (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer)
499
+ 04:40:34 zs_cal [R1 raw] P/C k10 0.8331/0.6330 k5 0.7029/0.4867 k3 0.5848/0.3763 | AUC knn 0.957 rf 0.966 | 1-NN 0.871 | MMD2 0.0195 (50.6 s)
500
+ 04:41:26 zs_cal [R1 dm] P/C k10 0.8550/0.6724 k5 0.7417/0.5207 k3 0.6335/0.4085 | AUC knn 0.950 rf 0.965 | 1-NN 0.859 | MMD2 0.0215 (51.8 s)
501
+ 04:42:13 zs_cal [R2 raw] AUC knn 0.960 rf 0.967 | 1-NN 0.876 | MMD2 0.0193 (44.6 s)
502
+ 04:43:00 zs_cal [R2 dm] AUC knn 0.952 rf 0.965 | 1-NN 0.864 | MMD2 0.0215 (46.3 s)
503
+ 04:43:15 zs_cal E_N[pc] sq 1.1774 (LB 201.624 UB 318.303 Dif 339.004) l2 1.1979 (14.8 s)
504
+ 04:44:24 zs_cal E_N[all] sq 1.2121 (LB 159.876 UB 256.106 Dif 276.516) l2 1.1939 (68.9 s)
505
+ 04:44:24 zs_cal done in 336 s
506
+ 04:44:25 fetching generated/imperial_eskd/fewshot_n5/draw4/lora__raw.npz (5.23 GiB) from spark-0110
507
+ 04:45:16 lora5: lora__raw.npz sha 62c5ed4a0339 (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer)
508
+ 04:46:09 lora5 [R1 raw] P/C k10 0.8319/0.6369 k5 0.6976/0.4958 k3 0.5748/0.3953 | AUC knn 0.930 rf 0.931 | 1-NN 0.826 | MMD2 0.0218 (50.5 s)
509
+ 04:47:00 lora5 [R1 dm] P/C k10 0.8529/0.7896 k5 0.7234/0.6314 k3 0.6082/0.4998 | AUC knn 0.900 rf 0.915 | 1-NN 0.783 | MMD2 0.0132 (50.6 s)
510
+ 04:47:47 lora5 [R2 raw] AUC knn 0.932 rf 0.930 | 1-NN 0.823 | MMD2 0.0218 (45.3 s)
511
+ 04:48:33 lora5 [R2 dm] AUC knn 0.901 rf 0.915 | 1-NN 0.780 | MMD2 0.0134 (45.4 s)
512
+ 04:48:48 lora5 E_N[pc] sq 1.5741 (LB 230.760 UB 316.249 Dif 365.332) l2 1.5934 (14.6 s)
513
+ 04:49:56 lora5 E_N[all] sq 1.4650 (LB 175.857 UB 255.660 Dif 292.765) l2 1.4135 (68.0 s)
514
+ 04:49:56 lora5 done in 332 s
515
+ 04:50:02 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer)
516
+ 04:50:56 zs_pseudo [R1 raw] P/C k10 0.8357/0.6990 k5 0.6959/0.5347 k3 0.5777/0.4144 | AUC knn 0.957 rf 0.966 | 1-NN 0.864 | MMD2 0.0175 (50.7 s)
517
+ 04:51:47 zs_pseudo [R1 dm] P/C k10 0.8824/0.7304 k5 0.7728/0.5734 k3 0.6606/0.4530 | AUC knn 0.946 rf 0.967 | 1-NN 0.850 | MMD2 0.0189 (51.8 s)
518
+ 04:52:35 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.966 | 1-NN 0.869 | MMD2 0.0173 (45.0 s)
519
+ 04:53:21 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.967 | 1-NN 0.857 | MMD2 0.0189 (46.3 s)
520
+ 04:53:36 zs_pseudo E_N[pc] sq 1.0414 (LB 195.874 UB 319.289 Dif 324.394) l2 1.0601 (14.6 s)
521
+ 04:54:45 zs_pseudo E_N[all] sq 1.0927 (LB 157.359 UB 256.190 Dif 265.350) l2 1.0848 (68.2 s)
522
+ 04:54:45 zs_pseudo done in 289 s
523
+ 04:54:46 fetching generated/imperial_eskd/fewshot_n5/draw4/scsemi5__raw.npz (0.15 GiB) from spark-0110
524
+ 04:55:05 scsemi5: scsemi5__raw.npz sha 7c3743fa01a1 (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer)
525
+ 04:56:00 scsemi5 [R1 raw] P/C k10 0.3237/0.0569 k5 0.1904/0.0358 k3 0.1147/0.0234 | AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.1444 (53.0 s)
526
+ 04:56:52 scsemi5 [R1 dm] P/C k10 0.3696/0.1280 k5 0.2475/0.0782 k3 0.1666/0.0539 | AUC knn 0.997 rf 0.999 | 1-NN 0.988 | MMD2 0.1306 (52.4 s)
527
+ 04:57:42 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.996 | MMD2 0.1443 (48.0 s)
528
+ 04:58:30 scsemi5 [R2 dm] AUC knn 0.998 rf 0.999 | 1-NN 0.989 | MMD2 0.1306 (47.8 s)
529
+ 04:58:44 scsemi5 E_N[pc] sq 1.7073 (LB 152.984 UB 318.809 Dif 436.098) l2 1.6027 (13.7 s)
530
+ 04:59:52 scsemi5 E_N[all] sq 2.0287 (LB 126.742 UB 254.270 Dif 385.458) l2 1.7862 (68.0 s)
531
+ 04:59:52 scsemi5 done in 307 s
532
+ 04:59:52 unit draw4 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw4 in 2024.8 s (k=10 max |diff| vs scorer 0.00e+00)
533
+ 04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw4/zs__cal.npz
534
+ 04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw4/lora__raw.npz
535
+ 04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw4/scsemi5__raw.npz
536
+ 04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/zs__raw_all.npz
537
+ 04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/zs__pseudo_all.npz
538
+ JOB_EXIT 0 11250s --design fewshot --dataset imperial_eskd --draws 0,1,2,3,4 --threads 6
539
+ JOB_START 2026-10-02T04:59:54+09:00 --design pooled --dataset imperial_eskd --threads 8
540
+ 04:59:54 /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/pooled done already
541
+ JOB_EXIT 0 0s --design pooled --dataset imperial_eskd --threads 8
542
+ UNIT_EXIT 0
paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/metadata/request.json ADDED
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