Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261006T033406Z-bulkonly-lora5-k1000/diffusion/dataset/server_1/model8/plans/bulkonly_lora5_20261006/data/imperial_eskd/BUILD.json

@@ -0,0 +1,47 @@
+{
+ "dataset": "imperial_eskd",
+ "written_utc": "2026-10-05T16:21:24.448994+00:00",
+ "tool": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bulkonly_lora5_20261006/tools/build_conditions.py",
+ "tool_sha256": "38cb97593c9a916b0dcd8d470a8c756e65c7ccc4bee6193f688e509d2e922862",
+ "bulk_harmonized": {
+  "path": "/home/sj_server_1/gblee/datalake/paired-pbmc-bulk-sc/processing/imperial_eskd_v1_20260928/bulk/Zenodo_6497251_htseq_counts/harmonized.h5ad",
+  "sha256": "7d6d7a18d0f3bdbf88e8a4124c30fc94238cb537c48f8a3d8931bcb66458a152"
+ },
+ "manifest": {
+  "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/imperial_eskd/MANIFEST.json",
+  "sha256": "51a9556b682f7e45972a85ee587922242a040ad826bf2dd54ea6327b3fd49f56"
+ },
+ "prepare_dataset_sha256": "36384262b23cf6260eff645812911c1a44f791ca8e4182765d91f2aabb3ccaef",
+ "builder": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/realbulk_generation_20260922/build_realbulk_conditions.py",
+ "builder_sha256": "e818d69e6801b5699579db7fc450590a266708d1fc2d544743e8624c9ee6a30a",
+ "recipe_k": 1000,
+ "depth_anchor": 3869.603120208939,
+ "cells_per_bulk": 1500,
+ "n_bulk_only": 164,
+ "checks": {
+  "paired_bulk_raw_equal": true,
+  "paired_bulk_valid_equal": true,
+  "paired_condition_counts_equal_conditions_raw_fixed": true,
+  "paired_measurement_fraction_equal": true,
+  "recipe_k": 1000,
+  "recipe_k_equal": true,
+  "sc_valid_identical_across_paired_rows": true,
+  "sc_valid_measured_panel_genes": 19656,
+  "bulk_only_n": 164,
+  "bulk_only_equals_pairing_table": true,
+  "bulk_only_disjoint_from_paired": true,
+  "bulk_only_unique": true
+ },
+ "groups": {
+  "covid_positive": 143,
+  "covid_negative": 19,
+  "recovery": 2
+ },
+ "sex_flagged": [
+  "C137_positive_2"
+ ],
+ "files": {
+  "bulkonly_raw.npz": "4ee0c1d4332cce6d0abd135c1d438510217f74a4ca007d0b7d8ba1350e5688f6",
+  "bulkonly_meta.csv": "a03307389c482fb5aeb9ee439cf3ec485dfa92dc1ed7eac34350e483a84563f3"
+ }
+}

paper-releases/pbisc-diffusion/updates/20261006T033406Z-bulkonly-lora5-k1000/diffusion/dataset/server_1/model8/plans/bulkonly_lora5_20261006/data/imperial_eskd/PARTS.json

@@ -0,0 +1,48 @@
+{
+ "source": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bulkonly_lora5_20261006/data/imperial_eskd/bulkonly_raw.npz",
+ "source_sha256": "4ee0c1d4332cce6d0abd135c1d438510217f74a4ca007d0b7d8ba1350e5688f6",
+ "n_rows": 164,
+ "per_row_keys": [
+  "bulk_counts",
+  "bulk_measurement_fraction",
+  "output_availability_mask",
+  "recipe_k",
+  "cells_per_bulk",
+  "sample_ids",
+  "donor_ids",
+  "groups",
+  "donor_n_cells",
+  "dataset_rows"
+ ],
+ "row_stride": 10000019,
+ "base_seed": 20260927,
+ "tool_sha256": "d0de0601b62557cd96126df7e8c34b424fd276ddac617653df7434ec0296194b",
+ "parts": [
+  {
+   "part": 0,
+   "rows": [
+    0,
+    82
+   ],
+   "n_samples": 82,
+   "file": "bulkonly_raw_part0.npz",
+   "sha256": "bcc1ba25b5d9964043d99404851d592f3b279f71b2d9b495da3768b80a5b15b8",
+   "seed": 20260927,
+   "first_sample": "C10_positive_18",
+   "last_sample": "C187_positive_9"
+  },
+  {
+   "part": 1,
+   "rows": [
+    82,
+    164
+   ],
+   "n_samples": 82,
+   "file": "bulkonly_raw_part1.npz",
+   "sha256": "0bcded4acd4f6d76e9751b7c8e524f6d8c466e74a7a2a5cb2bea162d26f93fa9",
+   "seed": 840262485,
+   "first_sample": "C189_negative",
+   "last_sample": "C99_positive_16"
+  }
+ ]
+}

paper-releases/pbisc-diffusion/updates/20261006T033406Z-bulkonly-lora5-k1000/diffusion/dataset/server_1/model8/plans/bulkonly_lora5_20261006/data/imperial_eskd/bulkonly_meta.csv

@@ -0,0 +1,165 @@
+sample_id,donor_id,group,sex,calc_age,ethnicity,WHO_severity,WHO_temp_severity,fatal_disease,time_from_first_symptoms,time_from_first_positive_swab,day_label,wave,waves,diabetes,cause_eskd,ihd,copd,smoking,bulk_sex_call,sex_flag,donor_trained_draw0,donor_trained_draw1,donor_trained_draw2,donor_trained_draw3,donor_trained_draw4
+C10_positive_18,C10,covid_positive,F,84,black,severe,moderate,False,18.0,18.0,18.0,w1,w1,yes.T2,DN (bx or presumed),yes.no.intervention,no,not.current,female,False,False,False,False,False,False
+C10_positive_21,C10,covid_positive,F,84,black,severe,moderate,False,21.0,21.0,21.0,w1,w1,yes.T2,DN (bx or presumed),yes.no.intervention,no,not.current,female,False,False,False,False,False,False
+C10_positive_30,C10,covid_positive,F,84,black,severe,mild,False,30.0,30.0,30.0,w1,w1,yes.T2,DN (bx or presumed),yes.no.intervention,no,not.current,female,False,False,False,False,False,False
+C101_positive_6,C101,covid_positive,M,61,asian,severe,severe,True,2.0,6.0,6.0,w2,w2,yes.T2,DN (bx or presumed),yes.cabg,no,not.current,male,False,False,True,True,False,False
+C101_positive_14,C101,covid_positive,M,61,asian,severe,severe,True,10.0,14.0,14.0,w2,w2,yes.T2,DN (bx or presumed),yes.cabg,no,not.current,male,False,False,True,True,False,False
+C101_negative,C101,covid_negative,M,61,asian,,NEGATIVE,,,,,w1,w1|w2,yes.T2,DN (bx or presumed),yes.cabg,no,not.current,male,False,False,True,True,False,False
+C105_negative,C105,covid_negative,F,75,asian,,NEGATIVE,False,-4.0,-7.0,,w1,w1,yes.T2,DN (bx or presumed),yes.stent,yes,not.current,female,False,False,False,False,False,False
+C108_positive_7,C108,covid_positive,F,79,white,severe,moderate,True,5.0,7.0,7.0,w2,w2,no,GN/Autoimmune,no,bi,not.current,female,False,False,False,False,True,False
+C108_positive_12,C108,covid_positive,F,79,white,severe,severe,True,10.0,12.0,12.0,w2,w2,no,GN/Autoimmune,no,bi,not.current,female,False,False,False,False,True,False
+C108_positive_16,C108,covid_positive,F,79,white,severe,severe,True,14.0,16.0,16.0,w2,w2,no,GN/Autoimmune,no,bi,not.current,female,False,False,False,False,True,False
+C11_positive_13,C11,covid_positive,M,62,white,severe,moderate,False,,13.0,13.0,w1,w1,yes.T2,GN/Autoimmune,no,no,not.current,male,False,False,False,False,False,False
+C11_positive_17,C11,covid_positive,M,62,white,severe,moderate,False,,17.0,17.0,w1,w1,yes.T2,GN/Autoimmune,no,no,not.current,male,False,False,False,False,False,False
+C11_positive_19,C11,covid_positive,M,62,white,severe,moderate,False,,19.0,19.0,w1,w1,yes.T2,GN/Autoimmune,no,no,not.current,male,False,False,False,False,False,False
+C11_positive_21,C11,covid_positive,M,62,white,severe,mild,False,,21.0,21.0,w1,w1,yes.T2,GN/Autoimmune,no,no,not.current,male,False,False,False,False,False,False
+C110_positive_11,C110,covid_positive,M,74,black,moderate,mild,False,11.0,11.0,11.0,w1,w1,no,Unknown,no,no,never,male,False,False,False,False,False,False
+C110_positive_14,C110,covid_positive,M,74,black,moderate,mild,False,14.0,14.0,14.0,w1,w1,no,Unknown,no,no,never,male,False,False,False,False,False,False
+C110_positive_2,C110,covid_positive,M,74,black,moderate,moderate,False,2.0,2.0,2.0,w1,w1,no,Unknown,no,no,never,male,False,False,False,False,False,False
+C110_positive_4,C110,covid_positive,M,74,black,moderate,moderate,False,4.0,4.0,4.0,w1,w1,no,Unknown,no,no,never,male,False,False,False,False,False,False
+C113_positive_27,C113,covid_positive,F,61,white,severe,mild,False,27.0,25.0,27.0,w1,w1,yes.T2,DN (bx or presumed),no,no,not.current,female,False,False,False,False,False,False
+C114_positive_13,C114,covid_positive,M,68,asian,severe,moderate,False,13.0,12.0,13.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C114_positive_16,C114,covid_positive,M,68,asian,severe,moderate,False,16.0,15.0,16.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C114_positive_24,C114,covid_positive,M,68,asian,severe,mild,False,24.0,23.0,24.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C114_positive_27,C114,covid_positive,M,68,asian,severe,mild,False,27.0,26.0,27.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C114_positive_31,C114,covid_positive,M,68,asian,severe,mild,False,31.0,30.0,31.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C114_positive_5,C114,covid_positive,M,68,asian,severe,moderate,False,5.0,4.0,5.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C114_positive_9,C114,covid_positive,M,68,asian,severe,severe,False,9.0,8.0,9.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C116_positive_16,C116,covid_positive,M,87,white,critical,moderate,False,16.0,15.0,16.0,w1,w1,no,GN/Autoimmune,yes.no.intervention,no,not.current,male,False,False,False,False,False,False
+C116_positive_26,C116,covid_positive,M,87,white,critical,moderate,False,26.0,25.0,26.0,w1,w1,no,GN/Autoimmune,yes.no.intervention,no,not.current,male,False,False,False,False,False,False
+C12_positive_11,C12,covid_positive,M,58,asian,severe,severe,False,11.0,8.0,11.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C12_positive_17,C12,covid_positive,M,58,asian,severe,moderate,False,17.0,14.0,17.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C12_positive_19,C12,covid_positive,M,58,asian,severe,mild,False,19.0,16.0,19.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C12_positive_22,C12,covid_positive,M,58,asian,severe,mild,False,22.0,19.0,22.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C12_positive_24,C12,covid_positive,M,58,asian,severe,mild,False,24.0,21.0,24.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C123_positive_25,C123,covid_positive,M,66,asian,severe,moderate,False,25.0,22.0,25.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C123_positive_35,C123,covid_positive,M,66,asian,severe,mild,False,35.0,32.0,35.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C123_positive_10,C123,covid_positive,M,66,asian,severe,severe,False,10.0,7.0,10.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,no,not.current,male,False,False,False,False,False,False
+C126_positive_9,C126,covid_positive,M,64,asian,mild,mild,False,9.0,9.0,9.0,w1,w1,no,Unknown,no,no,never,male,False,True,False,False,False,False
+C126_positive_11,C126,covid_positive,M,64,asian,mild,mild,False,11.0,11.0,11.0,w1,w1,no,Unknown,no,no,never,male,False,True,False,False,False,False
+C126_positive_5,C126,covid_positive,M,64,asian,mild,mild,False,5.0,5.0,5.0,w1,w1,no,Unknown,no,no,never,male,False,True,False,False,False,False
+C127_positive_11,C127,covid_positive,F,69,other,moderate,moderate,False,11.0,8.0,11.0,w1,w1,yes.T2,DN (bx or presumed),yes.cabg,no,never,female,False,False,False,False,False,False
+C127_positive_16,C127,covid_positive,F,69,other,moderate,moderate,False,16.0,13.0,16.0,w1,w1,yes.T2,DN (bx or presumed),yes.cabg,no,never,female,False,False,False,False,False,False
+C127_positive_23,C127,covid_positive,F,69,other,moderate,mild,False,23.0,20.0,23.0,w1,w1,yes.T2,DN (bx or presumed),yes.cabg,no,never,female,False,False,False,False,False,False
+C128_positive_16,C128,covid_positive,M,72,asian,mild,mild,False,16.0,13.0,16.0,w1,w1,yes.T2,DN (bx or presumed),unknown,no,not.current,male,False,False,False,False,False,False
+C128_positive_23,C128,covid_positive,M,72,asian,mild,mild,False,23.0,20.0,23.0,w1,w1,yes.T2,DN (bx or presumed),unknown,no,not.current,male,False,False,False,False,False,False
+C129_positive_13,C129,covid_positive,M,77,other,mild,mild,False,13.0,12.0,13.0,w1,w1,yes.T2,Other,yes.no.intervention,no,not.current,male,False,False,False,False,False,False
+C129_positive_3,C129,covid_positive,M,77,other,mild,mild,False,3.0,2.0,3.0,w1,w1,yes.T2,Other,yes.no.intervention,no,not.current,male,False,False,False,False,False,False
+C129_positive_6,C129,covid_positive,M,77,other,mild,mild,False,6.0,5.0,6.0,w1,w1,yes.T2,Other,yes.no.intervention,no,not.current,male,False,False,False,False,False,False
+C129_positive_8,C129,covid_positive,M,77,other,mild,mild,False,8.0,7.0,8.0,w1,w1,yes.T2,Other,yes.no.intervention,no,not.current,male,False,False,False,False,False,False
+C130_negative,C130,covid_negative,M,71,other,,NEGATIVE,,,,,w1,w1,no,Unknown,no,yes,not.current,male,False,False,False,False,False,False
+C132_positive_12,C132,covid_positive,F,77,asian,moderate,mild,False,12.0,11.0,12.0,w1,w1,yes.T2,DN (bx or presumed),yes.cabg,no,not.current,female,False,False,False,False,False,False
+C132_positive_14,C132,covid_positive,F,77,asian,moderate,mild,False,14.0,13.0,14.0,w1,w1,yes.T2,DN (bx or presumed),yes.cabg,no,not.current,female,False,False,False,False,False,False
+C132_positive_8,C132,covid_positive,F,77,asian,moderate,moderate,False,8.0,7.0,8.0,w1,w1,yes.T2,DN (bx or presumed),yes.cabg,no,not.current,female,False,False,False,False,False,False
+C105_positive_5,C105,covid_positive,F,75,asian,mild,mild,False,5.0,2.0,5.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,yes,not.current,female,False,False,False,False,False,False
+C105_positive_8,C105,covid_positive,F,75,asian,mild,mild,False,8.0,5.0,8.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,yes,not.current,female,False,False,False,False,False,False
+C105_positive_10,C105,covid_positive,F,75,asian,mild,mild,False,10.0,7.0,10.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,yes,not.current,female,False,False,False,False,False,False
+C105_positive_15,C105,covid_positive,F,75,asian,mild,mild,False,15.0,12.0,15.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,yes,not.current,female,False,False,False,False,False,False
+C105_positive_17,C105,covid_positive,F,75,asian,mild,mild,False,17.0,14.0,17.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,yes,not.current,female,False,False,False,False,False,False
+C105_positive_3,C105,covid_positive,F,75,asian,mild,mild,False,3.0,0.0,3.0,w1,w1,yes.T2,DN (bx or presumed),yes.stent,yes,not.current,female,False,False,False,False,False,False
+C137_positive_2,C137,covid_positive,F,60,asian,mild,mild,False,-5.0,2.0,2.0,w2,w2,yes.T2,DN (bx or presumed),no,no,not.current,ambiguous,True,False,False,False,False,True
+C137_positive_9,C137,covid_positive,F,60,asian,mild,mild,False,2.0,9.0,9.0,w2,w2,yes.T2,DN (bx or presumed),no,no,not.current,female,False,False,False,False,False,True
+C137_positive_12,C137,covid_positive,F,60,asian,mild,mild,False,5.0,12.0,12.0,w2,w2,yes.T2,DN (bx or presumed),no,no,not.current,female,False,False,False,False,False,True
+C137_positive_16,C137,covid_positive,F,60,asian,mild,mild,False,9.0,16.0,16.0,w2,w2,yes.T2,DN (bx or presumed),no,no,not.current,female,False,False,False,False,False,True
+C138_recovery,C138,recovery,F,77,asian,moderate,,False,42.0,47.0,,w2,w2,yes.T2,DN (bx or presumed),no,no,not.current,female,False,False,False,False,False,False
+C139_recovery,C139,recovery,M,85,white,severe,,False,55.0,54.0,,w2,w2,no,Unknown,no,no,not.current,male,False,False,False,False,False,False
+C141_negative,C141,covid_negative,M,85,black,,NEGATIVE,,,,,w1,w1|w2,no,Unknown,yes.stent,no,not.current,male,False,True,False,False,False,False
+C145_positive_11,C145,covid_positive,F,65,asian,severe,moderate,True,11.0,11.0,11.0,w2,w2,yes.T2,DN (bx or presumed),no,no,not.current,female,False,False,False,False,False,False
+C147_positive_8,C147,covid_positive,M,53,asian,critical,severe,True,6.0,8.0,8.0,w2,w2,yes.T2,DN (bx or presumed),yes.stent,no,unknown,male,False,False,False,False,False,False
+C149_positive_14,C149,covid_positive,M,76,white,mild,mild,False,14.0,14.0,14.0,w1,w1,no,Other,no,no,not.current,male,False,False,False,False,False,False
+C149_positive_3,C149,covid_positive,M,76,white,mild,mild,False,3.0,3.0,3.0,w1,w1,no,Other,no,no,not.current,male,False,False,False,False,False,False
+C153_negative,C153,covid_negative,M,50,asian,,NEGATIVE,,,,,w1,w1,yes.T2,DN (bx or presumed),no,no,not.current,male,False,False,False,False,False,False
+C162_negative,C162,covid_negative,M,62,white,,NEGATIVE,,,,,w1,w1,no,DN (bx or presumed),no,no,not.current,male,False,False,False,False,False,False
+C163_negative,C163,covid_negative,M,69,asian,,NEGATIVE,,,,,w1,w1,no,GN/Autoimmune,no,no,not.current,male,False,False,False,False,False,False
+C166_negative,C166,covid_negative,M,78,white,,NEGATIVE,,,,,w1,w1,no,Other,no,no,not.current,male,False,False,False,False,False,False
+C168_positive_12,C168,covid_positive,M,75,asian,mild,mild,False,,12.0,12.0,w2,w2,yes.T2,DN (bx or presumed),no,no,not.current,male,False,False,False,False,False,False
+C169_positive_12,C169,covid_positive,F,73,asian,mild,mild,False,,12.0,12.0,w2,w2,no,Unknown,yes.no.intervention,no,not.current,female,False,False,False,False,False,False
+C173_negative,C173,covid_negative,M,56,black,,NEGATIVE,,,,,w1,w1,no,GN/Autoimmune,no,no,not.current,male,False,False,False,False,False,False
+C18_positive_14,C18,covid_positive,M,64,asian,severe,moderate,False,9.0,14.0,14.0,w1,w1,no,Unknown,no,no,not.current,male,False,False,False,False,False,False
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paper-releases/pbisc-diffusion/updates/20261006T033406Z-bulkonly-lora5-k1000/diffusion/dataset/server_1/model8/plans/bulkonly_lora5_20261006/data/ye2026_sepsis/BUILD.json

@@ -0,0 +1,50 @@
+{
+ "dataset": "ye2026_sepsis",
+ "written_utc": "2026-10-05T16:21:23.352340+00:00",
+ "tool": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bulkonly_lora5_20261006/tools/build_conditions.py",
+ "tool_sha256": "38cb97593c9a916b0dcd8d470a8c756e65c7ccc4bee6193f688e509d2e922862",
+ "bulk_harmonized": {
+  "path": "/home/sj_server_1/gblee/datalake/paired-pbmc-bulk-sc/processing/ye2026_sepsis_v1_20260927/bulk/GSE279448_htseq_counts/harmonized.h5ad",
+  "sha256": "854a690e9da3aee0cfddbda6eb716731e39d5b37a984bf854c7683c312bb85a8"
+ },
+ "manifest": {
+  "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/MANIFEST.json",
+  "sha256": "5e0a18d129f73356040a12f4d131fb0e937c0c3b1297a4db97628a8ccb7a11e8"
+ },
+ "prepare_dataset_sha256": "36384262b23cf6260eff645812911c1a44f791ca8e4182765d91f2aabb3ccaef",
+ "builder": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/realbulk_generation_20260922/build_realbulk_conditions.py",
+ "builder_sha256": "e818d69e6801b5699579db7fc450590a266708d1fc2d544743e8624c9ee6a30a",
+ "recipe_k": 1000,
+ "depth_anchor": 3869.603120208939,
+ "cells_per_bulk": 1500,
+ "n_bulk_only": 122,
+ "checks": {
+  "paired_bulk_raw_equal": true,
+  "paired_bulk_valid_equal": true,
+  "paired_condition_counts_equal_conditions_raw_fixed": true,
+  "paired_measurement_fraction_equal": true,
+  "recipe_k": 1000,
+  "recipe_k_equal": true,
+  "sc_valid_identical_across_paired_rows": true,
+  "sc_valid_measured_panel_genes": 19864,
+  "bulk_only_n": 122,
+  "bulk_only_equals_pairing_table": true,
+  "bulk_only_disjoint_from_paired": true,
+  "bulk_only_unique": true
+ },
+ "groups": {
+  "adult_sepsis": 68,
+  "adult_HC": 36,
+  "adult_ICU_ctrl": 17,
+  "ped_ICU_ctrl": 1
+ },
+ "sex_flagged": [
+  "HC23",
+  "HC30",
+  "Res-S34"
+ ],
+ "files": {
+  "bulkonly_raw.npz": "7af31ca632ed2b781fe362030039bdc0b9030f1dd9d96e4f88dc3ccef0026bb6",
+  "bulkonly_meta.csv": "fd54f4acd9e02ae92b562a10178bede93405eab4adcab061b570d6bac397517b"
+ }
+}