Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores/giroux2022/loco_lora16_K1000/contrast.csv

@@ -0,0 +1,14 @@
+arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
+loco_lora16_K1000,T cell,mean_cp10k,2908,0.5321071670533167,0.6665223768938867,0.3123667456000795,0.49470793389031176,11,13,11,13,145034,23523,,,,,,,,,,,
+loco_lora16_K1000,T cell,pseudobulk_log1p_cpm,2908,0.5413472769171079,0.829771536027708,0.18361989709110962,0.5491948821740473,11,13,11,13,145034,23523,,,,,,,,,,,
+loco_lora16_K1000,B cell,mean_cp10k,3053,0.27971922215880207,0.5741068019580355,0.16076822214388112,0.2662144229837542,11,13,11,13,17383,3402,,,,,,,,,,,
+loco_lora16_K1000,B cell,pseudobulk_log1p_cpm,3053,0.2622271070452695,0.7295906969005199,0.05895943199495493,0.30681647451835814,11,13,11,13,17383,3402,,,,,,,,,,,
+loco_lora16_K1000,Monocyte,mean_cp10k,3056,0.19543688038068915,0.6998157471451955,0.08938188926294521,0.18969068475780493,11,13,11,13,47311,3736,,,,,,,,,,,
+loco_lora16_K1000,Monocyte,pseudobulk_log1p_cpm,3056,0.13980591269556664,0.8460762046394,0.013763441368625305,0.15667590396631684,11,13,11,13,47311,3736,,,,,,,,,,,
+loco_lora16_K1000,NK cell,mean_cp10k,2955,0.30436970708934313,0.6119759414285395,0.20008703514072748,0.24677374209586772,11,13,11,13,29061,3703,,,,,,,,,,,
+loco_lora16_K1000,NK cell,pseudobulk_log1p_cpm,2955,0.1761908885921292,0.7735167267842559,0.04389925856006555,0.19248305894080428,11,13,11,13,29061,3703,,,,,,,,,,,
+loco_lora16_K1000,T cell,welch_top50_deg,5563,,,,,11,13,11,13,145034,23523,True,5,0.08771929824561403,50,12,306,12,10,0.1724137931034483,18,18
+loco_lora16_K1000,B cell,welch_top50_deg,5563,,,,,11,13,11,13,17383,3402,True,4,0.4444444444444444,9,4,9,4,7,0.35,18,18
+loco_lora16_K1000,Monocyte,welch_top50_deg,5563,,,,,11,13,11,13,47311,3736,True,2,0.2857142857142857,7,2,7,2,7,0.3888888888888889,18,18
+loco_lora16_K1000,NK cell,welch_top50_deg,5563,,,,,11,13,11,13,29061,3703,True,3,0.058823529411764705,50,4,83,4,10,0.1724137931034483,18,18
+loco_lora16_K1000,DC,welch_top50_deg,5563,,,,,11,13,11,13,4328,705,True,0,0.0,7,0,7,0,5,0.25,18,18

paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores/giroux2022/zs_K1000/contrast.csv

@@ -0,0 +1,14 @@
+arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
+zs_K1000,T cell,mean_cp10k,2908,0.5717630270191804,0.6665223768938867,0.2543892928574004,0.6389611809977438,11,13,11,13,145034,18020,,,,,,,,,,,
+zs_K1000,T cell,pseudobulk_log1p_cpm,2908,0.6565962962452756,0.829771536027708,0.2114431939465908,0.6881037037767826,11,13,11,13,145034,18020,,,,,,,,,,,
+zs_K1000,B cell,mean_cp10k,3053,0.2773634354591137,0.5741068019580355,0.03345392000391439,0.4402836075770096,11,13,11,13,17383,4215,,,,,,,,,,,
+zs_K1000,B cell,pseudobulk_log1p_cpm,3053,0.3391065369150779,0.7295906969005199,0.015559349646707766,0.4517787425132129,11,13,11,13,17383,4215,,,,,,,,,,,
+zs_K1000,Monocyte,mean_cp10k,3056,0.4113206959562332,0.6998157471451955,0.2410429320678714,0.35802531060816506,11,13,11,13,47311,10027,,,,,,,,,,,
+zs_K1000,Monocyte,pseudobulk_log1p_cpm,3056,0.5240653026173442,0.8460762046394,0.19669810082331426,0.5130309043950927,11,13,11,13,47311,10027,,,,,,,,,,,
+zs_K1000,NK cell,mean_cp10k,2955,0.4300307836567434,0.6119759414285395,0.2615826548154691,0.3916453919304405,11,13,11,13,29061,2818,,,,,,,,,,,
+zs_K1000,NK cell,pseudobulk_log1p_cpm,2955,0.40176241626032544,0.7735167267842559,0.17636207939909654,0.38610120607466114,11,13,11,13,29061,2818,,,,,,,,,,,
+zs_K1000,T cell,welch_top50_deg,5563,,,,,11,13,11,13,145034,18020,True,5,0.09259259259259259,50,9,306,9,10,0.1724137931034483,18,18
+zs_K1000,B cell,welch_top50_deg,5563,,,,,11,13,11,13,17383,4215,True,5,0.5555555555555556,9,5,9,5,7,0.35,18,18
+zs_K1000,Monocyte,welch_top50_deg,5563,,,,,11,13,11,13,47311,10027,True,5,0.5555555555555556,7,7,7,7,7,0.3888888888888889,18,18
+zs_K1000,NK cell,welch_top50_deg,5563,,,,,11,13,11,13,29061,2818,True,4,0.08,50,4,83,4,10,0.1724137931034483,18,18
+zs_K1000,DC,welch_top50_deg,5563,,,,,11,13,11,13,4328,633,True,4,0.5714285714285714,7,4,7,4,5,0.25,18,18

paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores/imperial_eskd/zs_K1000/contrast.csv

@@ -0,0 +1,14 @@
+arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
+zs_K1000,T cell,mean_cp10k,3031,0.6233031545830364,0.6352016868529187,0.4328019666108583,0.5375046064532428,113,34,113,34,262546,64106,,,,,,,,,,,
+zs_K1000,T cell,pseudobulk_log1p_cpm,3031,0.42802256944528233,0.6294466207665587,0.14009009232739109,0.5337537224699545,113,34,113,34,262546,64106,,,,,,,,,,,
+zs_K1000,B cell,mean_cp10k,3184,0.6134662004952793,0.6290331452237995,0.47392908411756063,0.453140012811857,113,34,113,34,48625,14101,,,,,,,,,,,
+zs_K1000,B cell,pseudobulk_log1p_cpm,3184,0.37921683252444105,0.4870645233040134,0.2350469602068519,0.3905872722919253,113,34,113,34,48625,14101,,,,,,,,,,,
+zs_K1000,Monocyte,mean_cp10k,2877,0.7118595440822922,0.7184291928055079,0.41913636825578676,0.701735911173882,112,34,113,34,80851,115188,,,,,,,,,,,
+zs_K1000,Monocyte,pseudobulk_log1p_cpm,2877,0.6588959763254101,0.7066219687885489,0.37055998490081643,0.650690963385297,112,34,113,34,80851,115188,,,,,,,,,,,
+zs_K1000,NK cell,mean_cp10k,2964,0.619131460664119,0.6597572279517877,0.3853228375452056,0.5813024734817546,113,34,113,34,72125,20377,,,,,,,,,,,
+zs_K1000,NK cell,pseudobulk_log1p_cpm,2964,0.4378053962951357,0.5964102520780005,0.2095738626875738,0.4878543474581374,113,34,113,34,72125,20377,,,,,,,,,,,
+zs_K1000,T cell,welch_top50_deg,5927,,,,,113,34,113,34,262546,64106,True,27,0.3698630136986301,50,50,1057,1367,17,0.20481927710843373,50,2242
+zs_K1000,B cell,welch_top50_deg,5927,,,,,113,34,113,34,48625,14101,True,22,0.28205128205128205,50,50,298,549,14,0.16279069767441862,50,2242
+zs_K1000,Monocyte,welch_top50_deg,5927,,,,,112,34,113,34,80851,115188,True,27,0.3698630136986301,50,50,349,1456,22,0.28205128205128205,50,2242
+zs_K1000,NK cell,welch_top50_deg,5927,,,,,113,34,113,34,72125,20377,True,22,0.28205128205128205,50,50,427,953,16,0.19047619047619047,50,2242
+zs_K1000,DC,welch_top50_deg,5927,,,,,113,34,113,34,13572,2927,True,10,0.1111111111111111,50,50,341,367,15,0.17647058823529413,50,2242

paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores/ji2025_chili/loco_lora16_K1000/contrast.csv

@@ -0,0 +1,14 @@
+arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
+loco_lora16_K1000,T cell,mean_cp10k,3021,0.20268425379511953,0.22039608693345034,0.1511904024065317,0.2766203595302527,18,15,18,15,59396,24372,,,,,,,,,,,
+loco_lora16_K1000,T cell,pseudobulk_log1p_cpm,3021,0.28859980605125096,0.27145331834905573,0.23653821031636865,0.2514539023684234,18,15,18,15,59396,24372,,,,,,,,,,,
+loco_lora16_K1000,B cell,mean_cp10k,3245,-0.08770777753933644,0.13326750229861392,-0.10752230631234073,0.13424739159474694,18,15,18,15,7162,2114,,,,,,,,,,,
+loco_lora16_K1000,B cell,pseudobulk_log1p_cpm,3245,-0.11872687302095873,0.01993963216355321,-0.12027451487579073,0.06403859054219135,18,15,18,15,7162,2114,,,,,,,,,,,
+loco_lora16_K1000,Monocyte,mean_cp10k,3154,0.1840120352525352,0.3983317004681723,0.09938397108607265,0.23978086463987353,18,15,18,15,34457,12692,,,,,,,,,,,
+loco_lora16_K1000,Monocyte,pseudobulk_log1p_cpm,3154,0.12283999073815398,0.35676796217145185,0.07648682820201043,0.1461850274488971,18,15,18,15,34457,12692,,,,,,,,,,,
+loco_lora16_K1000,NK cell,mean_cp10k,3051,0.05791890021813316,0.20750320008350984,0.0236086193501655,0.16943378211186588,18,15,18,15,18147,2645,,,,,,,,,,,
+loco_lora16_K1000,NK cell,pseudobulk_log1p_cpm,3051,0.027951596560062818,0.10364196133517908,0.01962333979821144,0.08201002712556633,18,15,18,15,18147,2645,,,,,,,,,,,
+loco_lora16_K1000,T cell,welch_top50_deg,5752,,,,,18,15,18,15,59396,24372,True,8,0.08695652173913043,50,50,1897,643,0,0.0,15,15
+loco_lora16_K1000,B cell,welch_top50_deg,5752,,,,,18,15,18,15,7162,2114,True,0,0.0,50,22,73,22,1,0.015625,15,15
+loco_lora16_K1000,Monocyte,welch_top50_deg,5752,,,,,18,15,18,15,34457,12692,True,1,0.010101010101010102,50,50,346,124,2,0.031746031746031744,15,15
+loco_lora16_K1000,NK cell,welch_top50_deg,5752,,,,,18,15,18,15,18147,2645,True,0,0.0,50,4,396,4,1,0.015625,15,15
+loco_lora16_K1000,DC,welch_top50_deg,5752,,,,,16,15,18,15,1755,726,True,0,0.0,50,0,138,0,0,0.0,15,15