Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/sec08_pairs_realism.csv

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+panel,dataset,series,pairs,value,source,y_axis_break
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+coverage,ye2026_sepsis,lora,40,0.817560975609756,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/pooled/summary.json,False
+coverage,ye2026_sepsis,lora,all,0.829349593495935,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/pooled/summary.json,False
+coverage,ye2026_sepsis,ref_pseudo,,0.48,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/pooled/summary.json,False
+meta,ye2026_sepsis,n_scored_donors,,82,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/pooled/summary.json,
+meta,ye2026_sepsis,n_pairs_all,all,58–59,RUN.json train_rows: /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold0/real_lora/RUN.json;/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold1/real_lora/RUN.json;/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold2/real_lora/RUN.json;/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/real_lora/RUN.json;/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold4/real_lora/RUN.json,
+meta,ye2026_sepsis,n_inner_val,,7–8,"RUN.json inner_val_rows (all LoRA arms, 5 folds)",
+meta,ye2026_sepsis,n_test_donors_per_fold,,17/17/16/16/16,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/PREPARE.json fold_sizes test,
+meta,ye2026_sepsis,n_alpha_fit_pairs,0,65–66,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/PREPARE.json fold_sizes train+inner_val; prepare_dataset.py fit = fold != f,