Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/learning_curve_ceiling.csv

@@ -0,0 +1,101 @@
+dataset,design,unit,predictor,arm,celltype,n_genes,pearson_mean,pearson_sd,spearman_mean,spearman_sd,pearson_s20260926,spearman_s20260926,pearson_s20260927,spearman_s20260927,pearson_s20260928,spearman_s20260928,pearson_s20260929,spearman_s20260929,pearson_s20260930,spearman_s20260930,sb_reliability_pearson,noise_free_ceiling_pearson,sb_reliability_spearman,noise_free_ceiling_spearman,min_n_case_donors_A,min_n_control_donors_A,min_n_case_donors_B,min_n_control_donors_B,mean_n_cells_A,mean_n_cells_B,condition_sha256
+ye2026_sepsis,scored,cal_budget_20261001/pooled,split_half_A_vs_B,,T cell,3258.0,0.9891056786039693,0.0010509806744177,0.9409648898974032,0.00160818404526,0.9901832633061788,0.9422224618573212,0.9901998900918838,0.941246355454282,0.988081699567154,0.9419146870551344,0.9889515787722968,0.9412510035040016,0.988111961282333,0.9381899416162778,0.9945230052313376,0.9972577426279214,0.96958465842949,0.9846748998677128,61.0,21.0,61.0,21.0,149041.0,149076.0,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,split_half_A_vs_B,,B cell,3310.0,0.9722818649726396,0.0038519894191463,0.8664554419274527,0.0052630630309005,0.9752349439499808,0.8674262231871988,0.9674163163881386,0.8629094584103945,0.9715754830998996,0.8648732315609803,0.976984584435456,0.8750968262371378,0.970197996989724,0.8619714702415516,0.9859461593600644,0.9929482158501844,0.9284501761613776,0.9635611948191862,61.0,21.0,61.0,21.0,49846.0,49883.0,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,split_half_A_vs_B,,Monocyte,3289.0,0.9357376064697736,0.0016256905429243,0.7935178753331721,0.0046322877440346,0.9369332179396338,0.789810337875795,0.9346829385213596,0.788209305161708,0.9373484385626268,0.7953805048945396,0.9362582373277956,0.7998195083645836,0.9334651999974516,0.7943697203692343,0.9668021154750296,0.9832609600075808,0.8848731158430908,0.9406769455254502,61.0,21.0,61.0,21.0,55615.0,55654.0,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,split_half_A_vs_B,,NK cell,3240.0,0.9436123326816362,0.0042437531799845,0.7847918892550433,0.0056857013973688,0.9391679166455512,0.7755287178137203,0.9392587743251642,0.7873453137024741,0.9450271603760012,0.7902851552584125,0.9487311927849,0.7836584932244807,0.9458766192765646,0.7871417662761283,0.970988212839458,0.9853873415258886,0.8794211739527892,0.9377745858962,61.0,21.0,61.0,21.0,23895.0,23937.0,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n5.npz@1cea6891,,T cell,3258.0,0.2041100177985144,0.0078468908610771,0.2148092514643543,0.0032620217945036,0.1944450302919657,0.2146127097142194,0.1975817189211282,0.2178097878688975,0.2130961602844986,0.2174045952188324,0.2063828199238337,0.2096388474961227,0.2090443595711459,0.2145803170236994,,,,,,,,,,,1cea68911bc9a24dd0b60b1123ad5df097e2afca0556f5143c4caac3800f7b8b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n5.npz@1cea6891,,B cell,3310.0,0.240838516331878,0.0155155956323488,0.2327277812327613,0.0061354991695113,0.2593297812684036,0.2421406314586046,0.2215389686756454,0.2256570304054887,0.2397687707486934,0.2294903915317265,0.2528596684055006,0.2339165974713788,0.2306953925611471,0.2324342552966078,,,,,,,,,,,1cea68911bc9a24dd0b60b1123ad5df097e2afca0556f5143c4caac3800f7b8b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n5.npz@1cea6891,,Monocyte,3289.0,0.5640683101278594,0.0121030191673749,0.4333051876188737,0.0073760698072639,0.5592454342030173,0.4294991768172096,0.5507551377908867,0.426794355150574,0.5658012510277235,0.4433797571424738,0.5611366353400398,0.4279846948563707,0.5834030922776295,0.4388679541277409,,,,,,,,,,,1cea68911bc9a24dd0b60b1123ad5df097e2afca0556f5143c4caac3800f7b8b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n5.npz@1cea6891,,NK cell,3240.0,0.1267807969643833,0.0306943489457863,0.1303526310513172,0.0033037209765546,0.1529865031732155,0.1342000550278211,0.0797132087899921,0.1315859761454468,0.1462977736937929,0.126867392399061,0.1118863203948879,0.1269171840316788,0.1430201787700282,0.1321925476525782,,,,,,,,,,,1cea68911bc9a24dd0b60b1123ad5df097e2afca0556f5143c4caac3800f7b8b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n10.npz@6e314049,,T cell,3258.0,0.2111376573154983,0.007264081594674,0.2441879003147027,0.003088730007951,0.2021481009989826,0.2438048756867677,0.2051290431255997,0.2477633925234717,0.2194131145480196,0.2459249620306951,0.2132597946182081,0.2394800744881006,0.2157382332866816,0.2439661968444785,,,,,,,,,,,6e314049d3609c513cf3b32406f6221b0fd2af8acf4f2eee3749f6d55f2afab2
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n10.npz@6e314049,,B cell,3310.0,0.2429658900007981,0.0147877205066709,0.2626544690574682,0.0051587820408536,0.2601932274274361,0.2694645448147129,0.2240944754686905,0.2560307896332077,0.2422130691073033,0.2594712740269473,0.2546131659816545,0.2650413322001642,0.2337155120189064,0.2632644046123087,,,,,,,,,,,6e314049d3609c513cf3b32406f6221b0fd2af8acf4f2eee3749f6d55f2afab2
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n10.npz@6e314049,,Monocyte,3289.0,0.5733562711004514,0.0118399883826642,0.4571592120995739,0.0084439498499432,0.5684472515783636,0.4530797745819207,0.560411917728586,0.4478473907368479,0.5747282068147155,0.4679318005268766,0.5708409344337337,0.4528841068963685,0.5923530449468583,0.4640529877558556,,,,,,,,,,,6e314049d3609c513cf3b32406f6221b0fd2af8acf4f2eee3749f6d55f2afab2
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n10.npz@6e314049,,NK cell,3240.0,0.1314336641657227,0.0285389129095191,0.1542892011339359,0.0031454154733739,0.1556953099465708,0.1579498166792269,0.087399973192404,0.1563580449333851,0.1486244076995287,0.1510120768077757,0.1180370487223988,0.1510446412206733,0.1474115812677109,0.1550814260286183,,,,,,,,,,,6e314049d3609c513cf3b32406f6221b0fd2af8acf4f2eee3749f6d55f2afab2
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n20.npz@f21250c1,,T cell,3258.0,0.2294280393337354,0.0086305208755653,0.2285362970436974,0.003192418725474,0.2186154276762293,0.2280182698029381,0.2222740921361187,0.2317400095389674,0.238923416495955,0.2310029378108434,0.2322835244085054,0.223628131148046,0.2350437359518687,0.2282921369176919,,,,,,,,,,,f21250c1240d3876e3c6e0e11bad9f98c15ec6d407b998ff8e14a0e07be03c0b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n20.npz@f21250c1,,B cell,3310.0,0.2475922080589601,0.0164907251452272,0.2421772214331767,0.0058450675218736,0.2670526618813684,0.2510529720492578,0.2272511212180378,0.2356989385899324,0.2456371318523764,0.238508342297049,0.2609988916393335,0.2437193602900329,0.2370212337036848,0.2419064939396112,,,,,,,,,,,f21250c1240d3876e3c6e0e11bad9f98c15ec6d407b998ff8e14a0e07be03c0b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n20.npz@f21250c1,,Monocyte,3289.0,0.5608951162078716,0.0131517763202237,0.4407122825794977,0.0073575103441383,0.5559953258381408,0.4364084087013755,0.5467706107906652,0.4341713310037594,0.5620904244745705,0.4502558897869114,0.557399893558863,0.4357371725047146,0.5822193263771185,0.4469886109007273,,,,,,,,,,,f21250c1240d3876e3c6e0e11bad9f98c15ec6d407b998ff8e14a0e07be03c0b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n20.npz@f21250c1,,NK cell,3240.0,0.1554267591287028,0.0334889257595442,0.1403435459085889,0.0033673545849504,0.1849062427373,0.1445848656703537,0.1042782951787967,0.1411043576236405,0.1776107906818479,0.1370333925130151,0.139223021103807,0.1368142595121087,0.1711154459417625,0.1421808542238266,,,,,,,,,,,f21250c1240d3876e3c6e0e11bad9f98c15ec6d407b998ff8e14a0e07be03c0b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n40.npz@895d36fc,,T cell,3258.0,0.2207228549714767,0.0084441432074088,0.2235428714463087,0.0032546564638751,0.2101816787424097,0.2231368369770108,0.2137299788946282,0.22696111799897,0.2300301300928414,0.2257219635582745,0.2232980296151074,0.2184674391920894,0.2263744575123968,0.2234269995051989,,,,,,,,,,,895d36fcfc9b31988e604152c7655f9df49928dddb1a58db49429d115e040202
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n40.npz@895d36fc,,B cell,3310.0,0.2421140746985399,0.0163695234260675,0.2365309109005144,0.0056700448492855,0.2616037350814381,0.2450964672002986,0.2218200794334075,0.2301504101209538,0.2403935868699851,0.2330255720119316,0.2550812850674953,0.2380154052515483,0.2316716870403734,0.2363666999178395,,,,,,,,,,,895d36fcfc9b31988e604152c7655f9df49928dddb1a58db49429d115e040202
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n40.npz@895d36fc,,Monocyte,3289.0,0.5545460625333101,0.0132831207545058,0.4353856836791251,0.0076025209647069,0.549503522999238,0.431910748650182,0.5403777544682855,0.4279104325351738,0.5557240673740887,0.4452522035562264,0.5510002861517463,0.4302133517021252,0.5761246816731915,0.4416416819519178,,,,,,,,,,,895d36fcfc9b31988e604152c7655f9df49928dddb1a58db49429d115e040202
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n40.npz@895d36fc,,NK cell,3240.0,0.1431379892182102,0.0329526125724378,0.1333642361081855,0.0030696769129855,0.1717273505289658,0.1373459204152287,0.0927372365381221,0.1337083443534752,0.165087177122579,0.130706119572078,0.1271924586422237,0.1299552000661383,0.1589457232591605,0.1351055961340075,,,,,,,,,,,895d36fcfc9b31988e604152c7655f9df49928dddb1a58db49429d115e040202
+ye2026_sepsis,scored,cal_budget_20261001/pooled,split_half_A_vs_B,,mean4,,0.9601843706820048,0.0017672040992177,0.8464325241032679,0.002537193236172,0.960379835460336,0.8437469351835087,0.9578894798316364,0.8449276081822147,0.9605081954014204,0.8481133946922667,0.962731398330112,0.8499564578325509,0.9594129443865184,0.845418224625798,0.9795648732264725,0.989713565002894,0.9155822810966868,0.9566719065271372,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n5.npz@1cea6891,,mean4,,0.2839494103056588,0.0125808142988847,0.2527987128418266,0.0025557447819575,0.2915016872341505,0.2551131432544637,0.2623972585444131,0.2504617873926018,0.2912409889386771,0.2542855340730234,0.2830663610160655,0.2496143309638878,0.2915407557949876,0.2545187685251566,,,,,,,,,,,1cea68911bc9a24dd0b60b1123ad5df097e2afca0556f5143c4caac3800f7b8b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n10.npz@6e314049,,mean4,,0.2897233706456176,0.0119023420463413,0.2795726956514202,0.0023070289376673,0.2966209724878383,0.2810747529406571,0.2692588523788201,0.2769999044567281,0.2962446995423918,0.2810850283480737,0.2891877359389987,0.2771125387013267,0.2973045928800393,0.2815912538103153,,,,,,,,,,,6e314049d3609c513cf3b32406f6221b0fd2af8acf4f2eee3749f6d55f2afab2
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n20.npz@f21250c1,,mean4,,0.2983355306823175,0.0135239938636926,0.2629423367412401,0.0024198356083112,0.3066424145332597,0.2650161290559813,0.2751435298309046,0.2606786591890749,0.3060654408761875,0.2642001406019547,0.2974763326776272,0.2599747308637256,0.3063499354936086,0.2648420239954642,,,,,,,,,,,f21250c1240d3876e3c6e0e11bad9f98c15ec6d407b998ff8e14a0e07be03c0b
+ye2026_sepsis,scored,cal_budget_20261001/pooled,broadcast:conditions_pooled_cal_n40.npz@895d36fc,,mean4,,0.2901302453553842,0.0134134207388962,0.2572059255335334,0.0025596082982344,0.2982540718380129,0.25937249331068,0.2671662623336108,0.2546825762521432,0.2978087403648736,0.2586764646746277,0.2891430148691432,0.2541628490529753,0.2982791373712806,0.2591352443772409,,,,,,,,,,,895d36fcfc9b31988e604152c7655f9df49928dddb1a58db49429d115e040202
+ye2026_sepsis,pooled,pooled,split_half_A_vs_B,,T cell,3258.0,0.9891056786039693,0.0010509806744177,0.9409648898974032,0.00160818404526,0.9901832633061788,0.9422224618573212,0.9901998900918838,0.941246355454282,0.988081699567154,0.9419146870551344,0.9889515787722968,0.9412510035040016,0.988111961282333,0.9381899416162778,0.9945230052313376,0.9972577426279214,0.96958465842949,0.9846748998677128,61.0,21.0,61.0,21.0,149041.0,149076.0,
+ye2026_sepsis,pooled,pooled,split_half_A_vs_B,,B cell,3310.0,0.9722818649726396,0.0038519894191463,0.8664554419274527,0.0052630630309005,0.9752349439499808,0.8674262231871988,0.9674163163881386,0.8629094584103945,0.9715754830998996,0.8648732315609803,0.976984584435456,0.8750968262371378,0.970197996989724,0.8619714702415516,0.9859461593600644,0.9929482158501844,0.9284501761613776,0.9635611948191862,61.0,21.0,61.0,21.0,49846.0,49883.0,
+ye2026_sepsis,pooled,pooled,split_half_A_vs_B,,Monocyte,3289.0,0.9357376064697736,0.0016256905429243,0.7935178753331721,0.0046322877440346,0.9369332179396338,0.789810337875795,0.9346829385213596,0.788209305161708,0.9373484385626268,0.7953805048945396,0.9362582373277956,0.7998195083645836,0.9334651999974516,0.7943697203692343,0.9668021154750296,0.9832609600075808,0.8848731158430908,0.9406769455254502,61.0,21.0,61.0,21.0,55615.0,55654.0,
+ye2026_sepsis,pooled,pooled,split_half_A_vs_B,,NK cell,3240.0,0.9436123326816362,0.0042437531799845,0.7847918892550433,0.0056857013973688,0.9391679166455512,0.7755287178137203,0.9392587743251642,0.7873453137024741,0.9450271603760012,0.7902851552584125,0.9487311927849,0.7836584932244807,0.9458766192765646,0.7871417662761283,0.970988212839458,0.9853873415258886,0.8794211739527892,0.9377745858962,61.0,21.0,61.0,21.0,23895.0,23937.0,
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_raw.npz@3b2d8ef2,,T cell,3258.0,0.2626720694603431,0.0065786285135683,0.3009106580636672,0.0031149293201579,0.2535395739997044,0.2995828776852997,0.2582267688136924,0.3054951264897653,0.2695483043616237,0.3012708515546519,0.265697140389016,0.2969388712965836,0.2663485597376793,0.3012655632920353,,,,,,,,,,,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_raw.npz@3b2d8ef2,,B cell,3310.0,0.2565786391260477,0.0133572375399495,0.3049847972497407,0.0043815844183876,0.2709799223295593,0.3092171619280973,0.2384102618105991,0.2985328850513642,0.2557459464390218,0.302675160240215,0.2679588378673476,0.3081609450280621,0.2497982271837104,0.3063378340009648,,,,,,,,,,,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_raw.npz@3b2d8ef2,,Monocyte,3289.0,0.5494499495603321,0.0113876436876829,0.482324019966006,0.0099719325165956,0.5461516074338406,0.4761879003966214,0.5366250489963666,0.4710549114071669,0.5528614856975809,0.4954528743161847,0.5446048149517468,0.4793827148288272,0.5670067907221257,0.4895416988812298,,,,,,,,,,,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_raw.npz@3b2d8ef2,,NK cell,3240.0,0.1932582363436407,0.0269355923162804,0.2016434320244521,0.0032424768825348,0.2180441299098337,0.2040806555804846,0.1528138917284767,0.2026472999533644,0.2093365234491254,0.1998571162513613,0.1790229920252917,0.1969079275834647,0.2070736446054763,0.2047241607535858,,,,,,,,,,,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_cal.npz@216c347f,,T cell,3258.0,0.2068521879503665,0.0084032786954823,0.2174400995869237,0.0033404840339503,0.1962145610621117,0.2171057452272015,0.2001305053641926,0.2209156542504038,0.2161064613667034,0.2196755795687333,0.209226482585911,0.2122030004253302,0.212582929372914,0.2173005184629498,,,,,,,,,,,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_cal.npz@216c347f,,B cell,3310.0,0.2292146320926928,0.0165108685238088,0.2296496617742083,0.005836985982429,0.2485544224898221,0.2383793023879906,0.208412085540187,0.2229431553302677,0.227669778821929,0.2260863578034866,0.2424817750460257,0.2311990318638916,0.2189550985655005,0.2296404614854049,,,,,,,,,,,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_cal.npz@216c347f,,Monocyte,3289.0,0.5504291804817687,0.013525051757114,0.431292138713441,0.0077380644633638,0.5457221141957128,0.4285202172896485,0.5357467986963215,0.4234168049950893,0.5513644352830819,0.4408753984295981,0.5469514361881989,0.4256031547080467,0.5723611180455287,0.4380451181448223,,,,,,,,,,,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_cal.npz@216c347f,,NK cell,3240.0,0.1280095262707443,0.0327329962884165,0.1252847639080012,0.0029484518879607,0.1562020864010035,0.1288508551226459,0.0778026572889914,0.1257984788379805,0.1497595255258531,0.1227764844565626,0.1123754410758031,0.1218282094162774,0.1439079210620706,0.1271697917065394,,,,,,,,,,,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@ad384538,,T cell,3258.0,0.8057359191377598,0.0021705453453622,0.7773770052918552,0.0022556835192314,0.8039147062780816,0.7765013867742612,0.8034023326598593,0.7807330534776082,0.8087486282190057,0.7745200930347872,0.8058862356301223,0.777777199562012,0.8067276929017302,0.7773532936106077,,,,,,,,,,,ad3845385011335cb09bd87b2f5f08d1c30b3296cb6987c3573a6f8a863fc5eb
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@ad384538,,B cell,3310.0,0.7427557343694204,0.0042718206895946,0.6117440802038794,0.0045290237219138,0.7465254909169438,0.6076008092047076,0.7416583594426271,0.6180124889971167,0.743322433053124,0.6123270432058145,0.7462357796832608,0.6136749825681458,0.7360366087511461,0.6071050770436126,,,,,,,,,,,ad3845385011335cb09bd87b2f5f08d1c30b3296cb6987c3573a6f8a863fc5eb
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@ad384538,,Monocyte,3289.0,0.6373125947431879,0.0140366515916458,0.5320524498021004,0.0129530124778934,0.6200129674295505,0.5166704666799199,0.6389973323175099,0.5228397648119182,0.6336681039694184,0.5412505706681146,0.6589266649140595,0.5483096631519625,0.6349579050854014,0.5311917836985867,,,,,,,,,,,ad3845385011335cb09bd87b2f5f08d1c30b3296cb6987c3573a6f8a863fc5eb
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@ad384538,,NK cell,3240.0,0.7084977374599208,0.0114589607252765,0.6392858432570045,0.0016296179337402,0.7151605750958065,0.6377256710478907,0.6893699282878877,0.6417911075560124,0.7124616433443157,0.63840310637805,0.707130529366985,0.638502680470077,0.7183660112046092,0.6400066508329931,,,,,,,,,,,ad3845385011335cb09bd87b2f5f08d1c30b3296cb6987c3573a6f8a863fc5eb
+ye2026_sepsis,pooled,pooled,split_half_A_vs_B,,mean4,,0.9601843706820048,0.0017672040992177,0.8464325241032679,0.002537193236172,0.960379835460336,0.8437469351835087,0.9578894798316364,0.8449276081822147,0.9605081954014204,0.8481133946922667,0.962731398330112,0.8499564578325509,0.9594129443865184,0.845418224625798,0.9795648732264725,0.989713565002894,0.9155822810966868,0.9566719065271372,,,,,,,
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_raw.npz@3b2d8ef2,,mean4,,0.3154897236225909,0.0111432627230148,0.3224657268259664,0.0026575306109836,0.3221788084182345,0.3222671488976257,0.2965189928372837,0.3194325557254152,0.321873064986838,0.3248140005906032,0.3143209463083505,0.3203476146842344,0.322556805562248,0.3254673142319539,,,,,,,,,,,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_cal.npz@216c347f,,mean4,,0.2786263816988931,0.0134751907320846,0.2509166659956435,0.0026996474607469,0.2866732960371625,0.2532140300068717,0.2555230117224231,0.2482685233534353,0.2862250502493919,0.2523534550645951,0.2777587837239847,0.2477083491033865,0.2869517667615034,0.2530389724499291,,,,,,,,,,,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747
+ye2026_sepsis,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@ad384538,,mean4,,0.7235754964275722,0.0041452611083014,0.6401148446387099,0.0036814219035153,0.7214034349300956,0.6346245834266948,0.718356988176971,0.6408441037106639,0.7245502021464659,0.6416252033216916,0.7295448023986069,0.6445661314380493,0.7240220544857217,0.63891420129645,,,,,,,,,,,ad3845385011335cb09bd87b2f5f08d1c30b3296cb6987c3573a6f8a863fc5eb
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n5,zs__cal_n5,T cell,3258.0,-0.0146084400159924,0.0014985756060216,0.0808835454801967,0.0015924572038281,-0.0147781366264246,0.0816609103362611,-0.0145277151464263,0.0814330727930878,-0.0130190541449148,0.0828335447517723,-0.0169858891060354,0.0790635818801221,-0.0137314050561608,0.0794266176397401,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n5,zs__cal_n5,B cell,3310.0,0.122569455499027,0.0091315716349669,0.1054379687757915,0.0105068224814828,0.136768972534723,0.11908022163512,0.1128330162952159,0.0926423314589462,0.1212456420624148,0.0984811315086737,0.1170986762139988,0.1049810369501412,0.1249009703887825,0.1120051223260766,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n5,zs__cal_n5,Monocyte,3289.0,0.2343498462174288,0.0066163963338907,0.1630211541616534,0.0087747555286422,0.2319210424370102,0.1584505865374433,0.2245067013506144,0.1512832045861091,0.2418507973642497,0.1706410919372057,0.2352064995807236,0.1725378046401563,0.2382641903545461,0.1621930831073525,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n5,zs__cal_n5,NK cell,3240.0,-0.0186430150296499,0.0107317994416897,0.0640780882744156,0.0068243254842575,-0.0126693197771305,0.0732381061360319,-0.0276245666466003,0.0682291347088149,-0.0272195935253855,0.0561072058729906,-0.0229422669772254,0.0594903396486388,-0.0027593282219076,0.0633256550056019,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n10,zs__cal_n10,T cell,3258.0,0.0119382921682792,0.0012433972168523,0.0833549708404852,0.0029838362482556,0.0117341931641363,0.0839986357503878,0.0121529019251588,0.087454608714835,0.0132327238866424,0.0842394758608321,0.0099498864462518,0.081482693279895,0.0126217554192069,0.0795994405964761,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n10,zs__cal_n10,B cell,3310.0,0.1356250065987295,0.0090596146286971,0.117188944765042,0.0060851380607061,0.1497740708272326,0.1247846370459346,0.127209929467141,0.1131772037414319,0.1333650174045095,0.1092766957339575,0.1290841006261562,0.118267679430172,0.1386919146686084,0.1204385078737138,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n10,zs__cal_n10,Monocyte,3289.0,0.2175724426713387,0.0071715771525167,0.157918556368025,0.007645100882366,0.2136147066906411,0.1517691538065082,0.2077072903823734,0.1491671611490175,0.2257618734387004,0.1678201671096768,0.2181748460588523,0.1625217621449068,0.222603496786126,0.1583145376300155,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n10,zs__cal_n10,NK cell,3240.0,0.0211284162134531,0.0074684853023717,0.0906820649416043,0.006996539102634,0.0276425655975787,0.0981824011401693,0.0154078059311065,0.0973423182563212,0.0153577575081312,0.0886626678991505,0.0164661996595243,0.0816610468186354,0.0307677523709248,0.0875618905937451,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n20,zs__cal_n20,T cell,3258.0,0.0353768353842431,0.0012697247493741,0.1031428487928748,0.0027463946596882,0.0353462582630196,0.1021827849790628,0.0354044873042169,0.104408304325073,0.0368970591036241,0.1070981595009766,0.0333965219703989,0.0998028780329697,0.0358398502799559,0.102222117126292,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n20,zs__cal_n20,B cell,3310.0,0.1454481460732006,0.0091422485287936,0.0915795897109056,0.0095326579523827,0.1592674132197482,0.1031634639148511,0.1355694826121707,0.078911146898639,0.1439975258875332,0.0852632826290763,0.1396999116822913,0.0961542329224434,0.1487063969642595,0.0944058221895181,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n20,zs__cal_n20,Monocyte,3289.0,0.2367433496455956,0.0084753444938981,0.177173235823238,0.0117814578230671,0.2288562826853944,0.1641645896294935,0.2267928743949562,0.1666825449463785,0.2462700760628091,0.1882545679623728,0.2402605066487625,0.1895479571303641,0.2415370084360556,0.1772165194475813,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n20,zs__cal_n20,NK cell,3240.0,-0.0004146099534926,0.0104887410981538,0.0831313241218614,0.0046962177473924,0.0055454880100749,0.08925886100709,-0.0099116533727536,0.0861289569679377,-0.0060004423760903,0.0785679248110939,-0.0068423996891184,0.0785639737785079,0.015135957660424,0.0831369040446776,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n40,zs__cal_n40,T cell,3258.0,0.0407149428326679,0.0012982424886007,0.1063094682449475,0.0030799536492291,0.0404388120133596,0.1059213785435235,0.0412747306699359,0.1103966578857558,0.0419337689322274,0.1083698718983216,0.03859661335345,0.1037885486635258,0.0413307891943664,0.1030708842336107,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n40,zs__cal_n40,B cell,3310.0,0.1500270361198609,0.0084476425432334,0.110970482663843,0.0081638550231373,0.1627160111707058,0.1188902853585245,0.1405501088352319,0.1001703949938163,0.1486025945458742,0.1044458394505807,0.1451961263572379,0.1152083820288196,0.1530703396902551,0.1161375114874739,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n40,zs__cal_n40,Monocyte,3289.0,0.2467232990495632,0.0068353817216357,0.1937326423872539,0.0091969192568039,0.2411986697412274,0.1855157797236855,0.2388510240682184,0.1850362569417706,0.255985933756139,0.2046699363206753,0.2489532781611018,0.2020922547324024,0.2486275895211295,0.1913489842177358,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n40,zs__cal_n40,NK cell,3240.0,0.0449469755518379,0.0090222933365715,0.0917163719959397,0.0031355201666209,0.0482985827175075,0.0960251377127199,0.039396001296143,0.0935841992595143,0.0372994598596321,0.0883559065357763,0.0404737293377869,0.0893048913338155,0.0592671045481201,0.0913117251378724,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n5,zs__cal_n5,mean4,,0.0809169616677033,0.0052699709748961,0.1033551891730143,0.0035419163700222,0.0853106396420445,0.108107456161214,0.0737968589632009,0.0983969358867395,0.080714447939091,0.1020157435176606,0.0780942549278653,0.1040181907797646,0.086668606866315,0.1042376195196928,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n10,zs__cal_n10,mean4,,0.0965660394129501,0.0045723397093469,0.1122861342287891,0.0014486467061103,0.1006913840698972,0.11468370693575,0.0906194819264449,0.1117853229654014,0.0969293430594959,0.1124997516509042,0.0934187581976961,0.1109832954184023,0.1011712298112165,0.1114785941734876,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n20,zs__cal_n20,mean4,,0.1042884302873866,0.0051652814323361,0.11375674961222,0.0027212317685383,0.1072538605445592,0.1146924248826243,0.0969637977346475,0.109032738284507,0.105291054669469,0.1147959837258799,0.1016286351530836,0.1160172604660713,0.1103048033351738,0.1142453407020172,,,,,,,,,,,
+ye2026_sepsis,scored,cal_budget_20261001/pooled,generated:zs__cal_n40,zs__cal_n40,mean4,,0.1206030633884825,0.004118920004428,0.125682241322996,0.0020374736681529,0.1231630189107001,0.1265881453346133,0.1150179662173823,0.1222968772702143,0.1209554392734681,0.1264603885513384,0.1183049368023941,0.1275985191896408,0.1255739557384678,0.1254672762691732,,,,,,,,,,,
+ye2026_sepsis,pooled,pooled,generated:lora_n10__raw,lora_n10__raw,T cell,3258.0,0.5427508528617062,0.0014359507361078,0.3969654088161534,0.0031006968780741,0.5446321556066005,0.398559907091222,0.5412920395833193,0.3947446952327748,0.5436042065231771,0.398235584260437,0.5413924170536456,0.3928248817101838,0.542833445541789,0.4004619757861493,,,,,,,,,,,
+ye2026_sepsis,pooled,pooled,generated:lora_n10__raw,lora_n10__raw,B cell,3310.0,0.4912580043450723,0.0056722241376048,0.3168087448377444,0.0061599564868442,0.5002464274880054,0.3246159443733897,0.4886046513046588,0.3095889467375988,0.4907733195272326,0.3144366433608528,0.4849038140100256,0.3137335412074192,0.4917618093954392,0.321668648509462,,,,,,,,,,,
+ye2026_sepsis,pooled,pooled,generated:lora_n10__raw,lora_n10__raw,Monocyte,3289.0,0.3298959547574753,0.0030489963531716,0.2722855138338909,0.0074103011756977,0.3259477978879908,0.26491095520009,0.3322293939226296,0.2647809151489172,0.3329030506152434,0.2799795355120581,0.3274475313807568,0.2793375672316501,0.3309519999807562,0.2724185960767391,,,,,,,,,,,
+ye2026_sepsis,pooled,pooled,generated:lora_n10__raw,lora_n10__raw,NK cell,3240.0,0.3212155861629569,0.0021529986741387,0.2803898138684555,0.0054710692703912,0.3219128113605869,0.2754170296371742,0.3225963537155145,0.2894018063245055,0.32035390057064,0.2813553497995086,0.3178994104698378,0.2782935286901897,0.3233154546982053,0.2774813548908997,,,,,,,,,,,
+ye2026_sepsis,pooled,pooled,generated:lora_n20__raw,lora_n20__raw,T cell,3258.0,0.426623075296656,0.0028835564373674,0.3094056148987828,0.0032460479345786,0.4256611962550166,0.3050704559938676,0.4257568752544384,0.3131245809328392,0.4268371988314434,0.3094901384771106,0.4235418785663162,0.3075064417705364,0.4313182275760655,0.3118364573195604,,,,,,,,,,,
+ye2026_sepsis,pooled,pooled,generated:lora_n20__raw,lora_n20__raw,B cell,3310.0,0.3279072513828965,0.0095163493252737,0.2647826671301467,0.0069076095407857,0.34381827533846,0.2730568310045193,0.3232107528320362,0.2600227376727203,0.3256738017018392,0.2578109037066962,0.3188501131490757,0.2617596517897932,0.3279833138930712,0.2712632114770047,,,,,,,,,,,
+ye2026_sepsis,pooled,pooled,generated:lora_n20__raw,lora_n20__raw,Monocyte,3289.0,0.4714625198728573,0.0104003857295425,0.4143690953232672,0.0129682866307093,0.4691491660234635,0.4099032961609516,0.4577901301620878,0.3937864140626519,0.4787873099321281,0.4233486015392468,0.4671550674827996,0.425516314714948,0.4844309257638071,0.4192908501385378,,,,,,,,,,,
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paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/learning_curve_contrast.csv

@@ -0,0 +1,111 @@
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+ye2026_sepsis,pooled,pooled,lora_n20__raw,T cell,pseudobulk_log1p_cpm,"LoRA, 20 pairs + inner-val",3258.0,0.432585639270426,0.359146615600871,0.2164745523777111,0.240916231285217,0.3961064123818243,0.2871216553304306,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.432585639270426,0.2164745523777111,0.3961064123818243,0.2871216553304306
+ye2026_sepsis,pooled,pooled,lora_n20__raw,B cell,mean_cp10k,"LoRA, 20 pairs + inner-val",3310.0,0.3321946978404775,0.2745660939124993,0.2745863980165346,0.3175027599364949,0.2786169326625793,0.2704954997083306,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.3321946978404775,0.2745863980165346,0.2786169326625793,0.2704954997083306
+ye2026_sepsis,pooled,pooled,lora_n20__raw,B cell,pseudobulk_log1p_cpm,"LoRA, 20 pairs + inner-val",3310.0,0.3900928258747544,0.3543992891339305,0.2711145517540278,0.2962371727943274,0.34260847481169,0.266446716074581,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.3900928258747544,0.2711145517540278,0.34260847481169,0.266446716074581
+ye2026_sepsis,pooled,pooled,lora_n20__raw,Monocyte,mean_cp10k,"LoRA, 20 pairs + inner-val",3289.0,0.4731154978997833,0.4250254792575028,0.5481103923782986,0.4954952817895685,0.3065464687137934,0.444037121006217,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.4731154978997833,0.5481103923782986,0.3065464687137934,0.444037121006217
+ye2026_sepsis,pooled,pooled,lora_n20__raw,Monocyte,pseudobulk_log1p_cpm,"LoRA, 20 pairs + inner-val",3289.0,0.4953295759410024,0.3886410287147642,0.6203629305570988,0.539101617083415,0.3006515738277655,0.4611776279491457,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.4953295759410024,0.6203629305570988,0.3006515738277655,0.4611776279491457
+ye2026_sepsis,pooled,pooled,lora_n20__raw,NK cell,mean_cp10k,"LoRA, 20 pairs + inner-val",3240.0,0.2380024016763838,0.2239512380968599,0.1861970975708186,0.2100710394930663,0.2157653776606991,0.1531176275417305,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.2380024016763838,0.1861970975708186,0.2157653776606991,0.1531176275417305
+ye2026_sepsis,pooled,pooled,lora_n20__raw,NK cell,pseudobulk_log1p_cpm,"LoRA, 20 pairs + inner-val",3240.0,0.1824389180356632,0.1661414705054101,0.0559223817729322,0.1105798475161654,0.1789706032163485,0.0763569188833547,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.1824389180356632,0.0559223817729322,0.1789706032163485,0.0763569188833547
+ye2026_sepsis,pooled,pooled,lora_n40__raw,T cell,mean_cp10k,"LoRA, 40 pairs + inner-val",3258.0,0.5730957187041459,0.4324095375461726,0.2548893770824626,0.3032975355216083,0.5318773038370982,0.3929091408367464,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5730957187041459,0.2548893770824626,0.5318773038370982,0.3929091408367464
+ye2026_sepsis,pooled,pooled,lora_n40__raw,T cell,pseudobulk_log1p_cpm,"LoRA, 40 pairs + inner-val",3258.0,0.5383949336920686,0.4513149480044183,0.2164745523777111,0.240916231285217,0.5085322264390199,0.2974862959011373,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5383949336920686,0.2164745523777111,0.5085322264390199,0.2974862959011373
+ye2026_sepsis,pooled,pooled,lora_n40__raw,B cell,mean_cp10k,"LoRA, 40 pairs + inner-val",3310.0,0.5179327258132244,0.3816779437745389,0.2745863980165346,0.3175027599364949,0.4789110031028141,0.2727253407344491,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5179327258132244,0.2745863980165346,0.4789110031028141,0.2727253407344491
+ye2026_sepsis,pooled,pooled,lora_n40__raw,B cell,pseudobulk_log1p_cpm,"LoRA, 40 pairs + inner-val",3310.0,0.4630879856975656,0.4199843995198612,0.2711145517540278,0.2962371727943274,0.4272159703999414,0.2331205305341424,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.4630879856975656,0.2711145517540278,0.4272159703999414,0.2331205305341424
+ye2026_sepsis,pooled,pooled,lora_n40__raw,Monocyte,mean_cp10k,"LoRA, 40 pairs + inner-val",3289.0,0.5239839953516682,0.4596620925682284,0.5481103923782986,0.4954952817895685,0.3414065951190475,0.5068932860693207,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5239839953516682,0.5481103923782986,0.3414065951190475,0.5068932860693207
+ye2026_sepsis,pooled,pooled,lora_n40__raw,Monocyte,pseudobulk_log1p_cpm,"LoRA, 40 pairs + inner-val",3289.0,0.5114459836156183,0.4109823406166343,0.6203629305570988,0.539101617083415,0.2793919718960658,0.523459878130812,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5114459836156183,0.6203629305570988,0.2793919718960658,0.523459878130812
+ye2026_sepsis,pooled,pooled,lora_n40__raw,NK cell,mean_cp10k,"LoRA, 40 pairs + inner-val",3240.0,0.2885099431321096,0.2662385400710729,0.1861970975708186,0.2100710394930663,0.2558905774272709,0.2380301460277412,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.2885099431321096,0.1861970975708186,0.2558905774272709,0.2380301460277412
+ye2026_sepsis,pooled,pooled,lora_n40__raw,NK cell,pseudobulk_log1p_cpm,"LoRA, 40 pairs + inner-val",3240.0,0.2335800178735637,0.2147164992958868,0.0559223817729322,0.1105798475161654,0.2313089497590639,0.0528568264846164,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.2335800178735637,0.0559223817729322,0.2313089497590639,0.0528568264846164
+ye2026_sepsis,pooled,pooled,lora_n5__raw,T cell,mean_cp10k,"LoRA, 5 pairs + inner-val",3258.0,0.36443888559145,0.1844276883333536,0.2548893770824626,0.3032975355216083,0.3238107223223535,0.2360795084655582,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.36443888559145,0.2548893770824626,0.3238107223223535,0.2360795084655582
+ye2026_sepsis,pooled,pooled,lora_n5__raw,T cell,pseudobulk_log1p_cpm,"LoRA, 5 pairs + inner-val",3258.0,0.2962567122760599,0.2681284973189816,0.2164745523777111,0.240916231285217,0.2463114667115653,0.3138175875237864,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.2962567122760599,0.2164745523777111,0.2463114667115653,0.3138175875237864
+ye2026_sepsis,pooled,pooled,lora_n5__raw,B cell,mean_cp10k,"LoRA, 5 pairs + inner-val",3310.0,0.3701949485868334,0.2057250181712512,0.2745863980165346,0.3175027599364949,0.3304056250025911,0.219330872846326,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.3701949485868334,0.2745863980165346,0.3304056250025911,0.219330872846326
+ye2026_sepsis,pooled,pooled,lora_n5__raw,B cell,pseudobulk_log1p_cpm,"LoRA, 5 pairs + inner-val",3310.0,0.3282243292693539,0.3113177153335069,0.2711145517540278,0.2962371727943274,0.282224478883181,0.2372702933568676,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.3282243292693539,0.2711145517540278,0.282224478883181,0.2372702933568676
+ye2026_sepsis,pooled,pooled,lora_n5__raw,Monocyte,mean_cp10k,"LoRA, 5 pairs + inner-val",3289.0,0.2545690324707015,0.1907892781776115,0.5481103923782986,0.4954952817895685,0.1877019484457715,0.1828477228421649,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.2545690324707015,0.5481103923782986,0.1877019484457715,0.1828477228421649
+ye2026_sepsis,pooled,pooled,lora_n5__raw,Monocyte,pseudobulk_log1p_cpm,"LoRA, 5 pairs + inner-val",3289.0,0.2424462556234107,0.1954311875150919,0.6203629305570988,0.539101617083415,0.1118864825947277,0.2539963277953228,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.2424462556234107,0.6203629305570988,0.1118864825947277,0.2539963277953228
+ye2026_sepsis,pooled,pooled,lora_n5__raw,NK cell,mean_cp10k,"LoRA, 5 pairs + inner-val",3240.0,0.1869752163112568,0.1214702521219085,0.1861970975708186,0.2100710394930663,0.1593657677165443,0.1764416367610074,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.1869752163112568,0.1861970975708186,0.1593657677165443,0.1764416367610074
+ye2026_sepsis,pooled,pooled,lora_n5__raw,NK cell,pseudobulk_log1p_cpm,"LoRA, 5 pairs + inner-val",3240.0,0.1474830076219003,0.1175821547478342,0.0559223817729322,0.1105798475161654,0.1430480860374973,0.094813350396901,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.1474830076219003,0.0559223817729322,0.1430480860374973,0.094813350396901
+ye2026_sepsis,pooled,pooled,real_lora__raw,T cell,mean_cp10k,"LoRA, all training pairs",3258.0,0.6257359784040468,0.4551619626553134,0.2548893770824626,0.3032975355216083,0.5924819777427301,0.3464150497098309,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.6257359784040468,0.2548893770824626,0.5924819777427301,0.3464150497098309
+ye2026_sepsis,pooled,pooled,real_lora__raw,T cell,pseudobulk_log1p_cpm,"LoRA, all training pairs",3258.0,0.6104202602074371,0.5249637500311347,0.2164745523777111,0.240916231285217,0.5859071521986361,0.2950551863617932,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.6104202602074371,0.2164745523777111,0.5859071521986361,0.2950551863617932
+ye2026_sepsis,pooled,pooled,real_lora__raw,B cell,mean_cp10k,"LoRA, all training pairs",3310.0,0.5651781375262729,0.3628964774355127,0.2745863980165346,0.3175027599364949,0.5362866346505201,0.2311487187431812,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5651781375262729,0.2745863980165346,0.5362866346505201,0.2311487187431812
+ye2026_sepsis,pooled,pooled,real_lora__raw,B cell,pseudobulk_log1p_cpm,"LoRA, all training pairs",3310.0,0.4464326848208081,0.394134172619425,0.2711145517540278,0.2962371727943274,0.4224788014854532,0.1680470724547672,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.4464326848208081,0.2711145517540278,0.4224788014854532,0.1680470724547672
+ye2026_sepsis,pooled,pooled,real_lora__raw,Monocyte,mean_cp10k,"LoRA, all training pairs",3289.0,0.5783239193527594,0.5239721246902351,0.5481103923782986,0.4954952817895685,0.4359991477002349,0.4666968875559658,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5783239193527594,0.5481103923782986,0.4359991477002349,0.4666968875559658
+ye2026_sepsis,pooled,pooled,real_lora__raw,Monocyte,pseudobulk_log1p_cpm,"LoRA, all training pairs",3289.0,0.5790089789504562,0.4639143876711147,0.6203629305570988,0.539101617083415,0.3825022151997518,0.5203850587658495,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.5790089789504562,0.6203629305570988,0.3825022151997518,0.5203850587658495
+ye2026_sepsis,pooled,pooled,real_lora__raw,NK cell,mean_cp10k,"LoRA, all training pairs",3240.0,0.3378070492085955,0.3114773219569459,0.1861970975708186,0.2100710394930663,0.3102237552747658,0.2158742129737295,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.3378070492085955,0.1861970975708186,0.3102237552747658,0.2158742129737295
+ye2026_sepsis,pooled,pooled,real_lora__raw,NK cell,pseudobulk_log1p_cpm,"LoRA, all training pairs",3240.0,0.344066144027876,0.288578634592587,0.0559223817729322,0.1105798475161654,0.3423253122352236,0.0476517573822711,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.344066144027876,0.0559223817729322,0.3423253122352236,0.0476517573822711
+ye2026_sepsis,pooled,pooled,zs__cal,T cell,mean_cp10k,Zero-shot + calibration,3258.0,0.0427702254550522,0.0972068078003283,0.1969297410642873,0.217891847200155,-0.0365401431634768,0.3850726454380492,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,0.0427702254550522,0.1969297410642873,-0.0365401431634768,0.3850726454380492
+ye2026_sepsis,pooled,pooled,zs__cal,T cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3258.0,0.0746353054820611,0.1432825067494089,0.2033919295967274,0.2312867426259303,-0.0232075998383347,0.4658104895028383,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,0.0746353054820611,0.2033919295967274,-0.0232075998383347,0.4658104895028383
+ye2026_sepsis,pooled,pooled,zs__cal,B cell,mean_cp10k,Zero-shot + calibration,3310.0,0.1601027063015684,0.1318487605621787,0.249889912030715,0.2379496467367866,0.0866344782582319,0.3229941374112622,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,0.1601027063015684,0.249889912030715,0.0866344782582319,0.3229941374112622
+ye2026_sepsis,pooled,pooled,zs__cal,B cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3310.0,0.1709782655141315,0.203546137534457,0.261496814128435,0.2890822601613031,0.1036178356876855,0.2875345867940507,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,0.1709782655141315,0.261496814128435,0.1036178356876855,0.2875345867940507
+ye2026_sepsis,pooled,pooled,zs__cal,Monocyte,mean_cp10k,Zero-shot + calibration,3289.0,0.2463852682576883,0.2001646964272936,0.5466920059443193,0.441016863479317,0.10073805306716,0.3036762225282766,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,0.2463852682576883,0.5466920059443193,0.10073805306716,0.3036762225282766
+ye2026_sepsis,pooled,pooled,zs__cal,Monocyte,pseudobulk_log1p_cpm,Zero-shot + calibration,3289.0,0.1456575498485494,0.086959824590547,0.6126071312257859,0.5358894261911824,-0.1045820824791842,0.3634702039452957,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,0.1456575498485494,0.6126071312257859,-0.1045820824791842,0.3634702039452957
+ye2026_sepsis,pooled,pooled,zs__cal,NK cell,mean_cp10k,Zero-shot + calibration,3240.0,0.0414606035680198,0.0981414850191709,0.1181467604997589,0.1278349007615349,0.0066962082201973,0.2971872909501638,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,0.0414606035680198,0.1181467604997589,0.0066962082201973,0.2971872909501638
+ye2026_sepsis,pooled,pooled,zs__cal,NK cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3240.0,-0.0391771392885436,0.0494281114737753,0.0413966132913561,0.1010250224311521,-0.0499908673882645,0.2283177611334691,conditions_pooled_cal.npz@216c347f,216c347fc5b482566ba505b9692631776c68d8149c6cb4cccb43bd238dbc1747,-0.0391771392885436,0.0413966132913561,-0.0499908673882645,0.2283177611334691
+ye2026_sepsis,pooled,pooled,zs__raw,T cell,mean_cp10k,"Zero-shot, real bulk",3258.0,-0.108051976860686,-0.179462593483404,0.2548893770824626,0.3032975355216083,-0.1780046804255089,0.2328195788463539,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,-0.108051976860686,0.2548893770824626,-0.1780046804255089,0.2328195788463539
+ye2026_sepsis,pooled,pooled,zs__raw,T cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3258.0,-0.0305573392448,-0.0297096039404065,0.2164745523777111,0.240916231285217,-0.096252976790098,0.2760669233562615,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,-0.0305573392448,0.2164745523777111,-0.096252976790098,0.2760669233562615
+ye2026_sepsis,pooled,pooled,zs__raw,B cell,mean_cp10k,"Zero-shot, real bulk",3310.0,0.0611554519614696,-0.0320409061705586,0.2745863980165346,0.3175027599364949,0.0042338846090126,0.2082169277348574,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.0611554519614696,0.2745863980165346,0.0042338846090126,0.2082169277348574
+ye2026_sepsis,pooled,pooled,zs__raw,B cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3310.0,0.0938089730824056,0.0875459829354982,0.2711145517540278,0.2962371727943274,0.0390205023296153,0.2105830447407377,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.0938089730824056,0.2711145517540278,0.0390205023296153,0.2105830447407377
+ye2026_sepsis,pooled,pooled,zs__raw,Monocyte,mean_cp10k,"Zero-shot, real bulk",3289.0,0.0691359517747724,0.0024314858567402,0.5481103923782986,0.4954952817895685,-0.0763853649254121,0.2393107398368436,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.0691359517747724,0.5481103923782986,-0.0763853649254121,0.2393107398368436
+ye2026_sepsis,pooled,pooled,zs__raw,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3289.0,0.1891086985741442,0.1597423737345696,0.6203629305570988,0.539101617083415,-0.0619367926302401,0.377352127886649,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,0.1891086985741442,0.6203629305570988,-0.0619367926302401,0.377352127886649
+ye2026_sepsis,pooled,pooled,zs__raw,NK cell,mean_cp10k,"Zero-shot, real bulk",3240.0,-0.0694500927553093,-0.0421701834481292,0.1861970975708186,0.2100710394930663,-0.1289001848353248,0.2799771896817431,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,-0.0694500927553093,0.1861970975708186,-0.1289001848353248,0.2799771896817431
+ye2026_sepsis,pooled,pooled,zs__raw,NK cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3240.0,-0.0235339908373046,0.047530369993462,0.0559223817729322,0.1105798475161654,-0.0393520119503497,0.2579741710941951,conditions_pooled_raw.npz@3b2d8ef2,3b2d8ef2a51603a490100c336f3702cdac11d1ba2288490e36dd52986f56dd13,-0.0235339908373046,0.0559223817729322,-0.0393520119503497,0.2579741710941951
+ye2026_sepsis,pooled,pooled,lora_n10__raw,mean4,mean_cp10k,"LoRA, 10 pairs + inner-val",,0.4222959020688887,0.3216502507818841,0.3159458162620286,0.3315916541851845,0.3690466911433415,0.2511920469364357,,,0.4222959020688887,0.3159458162620285,0.3690466911433415,0.2511920469364356
+ye2026_sepsis,pooled,pooled,lora_n10__raw,mean4,pseudobulk_log1p_cpm,"LoRA, 10 pairs + inner-val",,0.3619701248208384,0.3117201926959389,0.2909686041154424,0.2967087171697812,0.3044188083169397,0.2143725621023095,,,0.3619701248208384,0.2909686041154424,0.3044188083169397,0.2143725621023094
+ye2026_sepsis,pooled,pooled,lora_n20__raw,mean4,mean_cp10k,"LoRA, 20 pairs + inner-val",,0.3671933060907342,0.3079567223197276,0.3159458162620286,0.3315916541851845,0.294607811871337,0.2933053072546658,,,0.3671933060907342,0.3159458162620285,0.294607811871337,0.2933053072546658
+ye2026_sepsis,pooled,pooled,lora_n20__raw,mean4,pseudobulk_log1p_cpm,"LoRA, 20 pairs + inner-val",,0.3751117397804615,0.3170821009887439,0.2909686041154424,0.2967087171697812,0.3045842660594071,0.272775729559378,,,0.3751117397804615,0.2909686041154424,0.3045842660594071,0.2727757295593779
+ye2026_sepsis,pooled,pooled,lora_n40__raw,mean4,mean_cp10k,"LoRA, 40 pairs + inner-val",,0.4758805957502869,0.3849970284900032,0.3159458162620286,0.3315916541851845,0.4020213698715577,0.3526394784170643,,,0.4758805957502869,0.3159458162620285,0.4020213698715577,0.3526394784170643
+ye2026_sepsis,pooled,pooled,lora_n40__raw,mean4,pseudobulk_log1p_cpm,"LoRA, 40 pairs + inner-val",,0.436627230219704,0.3742495468592001,0.2909686041154424,0.2967087171697812,0.3616122796235227,0.276730882762677,,,0.436627230219704,0.2909686041154424,0.3616122796235227,0.276730882762677
+ye2026_sepsis,pooled,pooled,lora_n5__raw,mean4,mean_cp10k,"LoRA, 5 pairs + inner-val",,0.2940445207400604,0.1756030592010312,0.3159458162620286,0.3315916541851845,0.2503210158718151,0.2036749352287641,,,0.2940445207400604,0.3159458162620285,0.250321015871815,0.2036749352287641
+ye2026_sepsis,pooled,pooled,lora_n5__raw,mean4,pseudobulk_log1p_cpm,"LoRA, 5 pairs + inner-val",,0.2536025761976812,0.2231148887288536,0.2909686041154424,0.2967087171697812,0.1958676285567428,0.2249743897682194,,,0.2536025761976812,0.2909686041154424,0.1958676285567428,0.2249743897682194
+ye2026_sepsis,pooled,pooled,real_lora__raw,mean4,mean_cp10k,"LoRA, all training pairs",,0.5267612711229187,0.4133769716845018,0.3159458162620286,0.3315916541851845,0.4687478788420627,0.3150337172456768,,,0.5267612711229187,0.3159458162620285,0.4687478788420627,0.3150337172456768
+ye2026_sepsis,pooled,pooled,real_lora__raw,mean4,pseudobulk_log1p_cpm,"LoRA, all training pairs",,0.4949820170016443,0.4178977362285653,0.2909686041154424,0.2967087171697812,0.4333033702797662,0.2577847687411703,,,0.4949820170016443,0.2909686041154424,0.4333033702797662,0.2577847687411702
+ye2026_sepsis,pooled,pooled,zs__cal,mean4,mean_cp10k,Zero-shot + calibration,,0.1226797008955822,0.1318404374522429,0.2779146048847701,0.2561733145444484,0.0393821490955281,0.327232574081938,,,0.1226797008955821,0.2779146048847701,0.039382149095528,0.3272325740819379
+ye2026_sepsis,pooled,pooled,zs__cal,mean4,pseudobulk_log1p_cpm,Zero-shot + calibration,,0.0880234953890496,0.1208041450870471,0.2797231220605761,0.289320862852392,-0.0185406785045244,0.3362832603439135,,,0.0880234953890496,0.2797231220605761,-0.0185406785045244,0.3362832603439134
+ye2026_sepsis,pooled,pooled,zs__raw,mean4,mean_cp10k,"Zero-shot, real bulk",,-0.0118026664699383,-0.0628105493113379,0.3159458162620286,0.3315916541851845,-0.0947640863943083,0.2400811090249495,,,-0.0118026664699383,0.3159458162620285,-0.0947640863943083,0.2400811090249495
+ye2026_sepsis,pooled,pooled,zs__raw,mean4,pseudobulk_log1p_cpm,"Zero-shot, real bulk",,0.0572065853936112,0.0662772806807808,0.2909686041154424,0.2967087171697812,-0.0396303197602681,0.2804940667694608,,,0.0572065853936113,0.2909686041154424,-0.0396303197602681,0.2804940667694608

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/learning_curve_deg_limma.csv

@@ -0,0 +1,166 @@
+dataset,design,unit,arm,celltype,method,deg_scored,pred_defined,overlap,overlap_scorer,obs_list_size,gen_list_size,n_sig_obs,n_sig_gen,n_tested_obs,n_tested_gen,G_both,chance_overlap,broadcast_overlap,broadcast_overlap_scorer,broadcast_list_size,n_sig_broadcast,n_tested_broadcast,G_both_broadcast,broadcast_chance_overlap,condition
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n5,T cell,welch,True,True,5,5.0,50,50,1578,117,5810,4595,4590,0.5446623093681917,2,2.0,50,764,5858,5724,0.4367575122292103,conditions_pooled_cal_n5.npz@1cea6891
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n5,B cell,welch,True,True,2,2.0,50,50,1102,300,5752,4106,4101,0.60960741282614,1,1.0,50,764,5858,5669,0.4409948844593402,conditions_pooled_cal_n5.npz@1cea6891
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n5,Monocyte,welch,True,True,4,4.0,50,50,2459,380,5754,4306,4297,0.5818012566907145,13,13.0,50,764,5858,5673,0.4406839414771725,conditions_pooled_cal_n5.npz@1cea6891
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n5,NK cell,welch,True,True,0,0.0,50,44,1235,44,5623,3716,3710,0.5929919137466307,2,2.0,50,764,5858,5551,0.4503693028283192,conditions_pooled_cal_n5.npz@1cea6891
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n5,DC,welch,True,True,1,1.0,50,50,1572,54,5330,3499,3489,0.7165376898824878,1,1.0,50,764,5858,5280,0.4734848484848485,conditions_pooled_cal_n5.npz@1cea6891
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n10,T cell,welch,True,True,2,2.0,50,50,1578,147,5810,4623,4613,0.5419466724474312,3,3.0,50,896,5858,5724,0.4367575122292103,conditions_pooled_cal_n10.npz@6e314049
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n10,B cell,welch,True,True,2,2.0,50,50,1102,325,5752,4078,4069,0.6144015728680265,3,3.0,50,896,5858,5669,0.4409948844593402,conditions_pooled_cal_n10.npz@6e314049
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n10,Monocyte,welch,True,True,6,6.0,50,50,2459,387,5754,4284,4276,0.5846585594013096,13,13.0,50,896,5858,5673,0.4406839414771725,conditions_pooled_cal_n10.npz@6e314049
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n10,NK cell,welch,True,True,0,0.0,50,50,1235,58,5623,3743,3734,0.6695232994108195,2,2.0,50,896,5858,5551,0.4503693028283192,conditions_pooled_cal_n10.npz@6e314049
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n10,DC,welch,True,True,0,0.0,50,22,1572,22,5330,3474,3470,0.3170028818443804,1,1.0,50,896,5858,5280,0.4734848484848485,conditions_pooled_cal_n10.npz@6e314049
+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n20,T cell,welch,True,True,1,1.0,50,50,1578,137,5810,4603,4594,0.5441880713974749,2,2.0,50,845,5858,5724,0.4367575122292103,conditions_pooled_cal_n20.npz@f21250c1
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+ye2026_sepsis,scored,cal_budget_20261001/pooled,zs__cal_n20,Monocyte,welch,True,True,4,4.0,50,50,2459,408,5754,4311,4304,0.5808550185873605,13,13.0,50,845,5858,5673,0.4406839414771725,conditions_pooled_cal_n20.npz@f21250c1
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