Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/06dd3dede455dd0c/support.json

@@ -0,0 +1,254 @@
+{
+  "schema": "pbisc.paper.strict-support.v1",
+  "cohort": "ye2026_sepsis",
+  "design": "disease_existing_draw",
+  "unit": "draw0_n5",
+  "n_pairs": 5,
+  "train_sample_ids": [
+    "HC07",
+    "Abd-S66",
+    "Res-S150",
+    "Skin-S74",
+    "Res-S77"
+  ],
+  "train_donor_ids": [
+    "HC07",
+    "Abd-S66",
+    "Res-S150",
+    "Skin-S74",
+    "Res-S77"
+  ],
+  "test_sample_ids": [
+    "Abd-PS04",
+    "Abd-PS05",
+    "Abd-PS07",
+    "Abd-PS19",
+    "Abd-PS20",
+    "Abd-PS23",
+    "Abd-PS27",
+    "Abd-S102",
+    "Abd-S103",
+    "Abd-S120",
+    "Abd-S123",
+    "Abd-S156",
+    "Abd-S39",
+    "Abd-S42",
+    "Abd-S47",
+    "Abd-S51",
+    "Abd-S54",
+    "Abd-S57",
+    "Abd-S79",
+    "Abd-S83",
+    "Abd-S98",
+    "HC01",
+    "HC05",
+    "HC09",
+    "HC12",
+    "HC13",
+    "HC16",
+    "IC10",
+    "IC15",
+    "IC16",
+    "IC19",
+    "IC22",
+    "IC23",
+    "PHC01",
+    "PHC02",
+    "PHC03",
+    "PHC05",
+    "PIC01",
+    "PIC02",
+    "PIC04",
+    "PIC05",
+    "Res-PS02",
+    "Res-PS03",
+    "Res-PS12",
+    "Res-PS16",
+    "Res-PS21",
+    "Res-PS22",
+    "Res-PS25",
+    "Res-PS26",
+    "Res-S10",
+    "Res-S125",
+    "Res-S127",
+    "Res-S136",
+    "Res-S139",
+    "Res-S146",
+    "Res-S149",
+    "Res-S164",
+    "Res-S166",
+    "Res-S174",
+    "Res-S177",
+    "Res-S184",
+    "Res-S19",
+    "Res-S26",
+    "Res-S40",
+    "Res-S87",
+    "Skin-S140",
+    "Skin-S142",
+    "Skin-S152",
+    "Skin-S38",
+    "Skin-S43",
+    "Skin-S46",
+    "Skin-S52",
+    "Uri-S134",
+    "Uri-S147",
+    "Uri-S157",
+    "Uri-S20",
+    "Uri-S93"
+  ],
+  "test_donor_ids": [
+    "Abd-PS04",
+    "Abd-PS05",
+    "Abd-PS07",
+    "Abd-PS19",
+    "Abd-PS20",
+    "Abd-PS23",
+    "Abd-PS27",
+    "Abd-S102",
+    "Abd-S103",
+    "Abd-S120",
+    "Abd-S123",
+    "Abd-S156",
+    "Abd-S39",
+    "Abd-S42",
+    "Abd-S47",
+    "Abd-S51",
+    "Abd-S54",
+    "Abd-S57",
+    "Abd-S79",
+    "Abd-S83",
+    "Abd-S98",
+    "HC01",
+    "HC05",
+    "HC09",
+    "HC12",
+    "HC13",
+    "HC16",
+    "IC10",
+    "IC15",
+    "IC16",
+    "IC19",
+    "IC22",
+    "IC23",
+    "PHC01",
+    "PHC02",
+    "PHC03",
+    "PHC05",
+    "PIC01",
+    "PIC02",
+    "PIC04",
+    "PIC05",
+    "Res-PS02",
+    "Res-PS03",
+    "Res-PS12",
+    "Res-PS16",
+    "Res-PS21",
+    "Res-PS22",
+    "Res-PS25",
+    "Res-PS26",
+    "Res-S10",
+    "Res-S125",
+    "Res-S127",
+    "Res-S136",
+    "Res-S139",
+    "Res-S146",
+    "Res-S149",
+    "Res-S164",
+    "Res-S166",
+    "Res-S174",
+    "Res-S177",
+    "Res-S184",
+    "Res-S19",
+    "Res-S26",
+    "Res-S40",
+    "Res-S87",
+    "Skin-S140",
+    "Skin-S142",
+    "Skin-S152",
+    "Skin-S38",
+    "Skin-S43",
+    "Skin-S46",
+    "Skin-S52",
+    "Uri-S134",
+    "Uri-S147",
+    "Uri-S157",
+    "Uri-S20",
+    "Uri-S93"
+  ],
+  "excluded_sample_ids": [],
+  "seed": null,
+  "selection_audit": [
+    {
+      "donor_id": "HC07",
+      "assigned_stratum": false,
+      "selected_sample_id": "HC07",
+      "candidates": [
+        {
+          "sample_id": "HC07",
+          "time_value": 0.0,
+          "time_raw": "none (single sample per donor)",
+          "time_field": "timepoint",
+          "group": "adult_HC"
+        }
+      ]
+    },
+    {
+      "donor_id": "Abd-S66",
+      "assigned_stratum": true,
+      "selected_sample_id": "Abd-S66",
+      "candidates": [
+        {
+          "sample_id": "Abd-S66",
+          "time_value": 0.0,
+          "time_raw": "none (single sample per donor)",
+          "time_field": "timepoint",
+          "group": "adult_sepsis"
+        }
+      ]
+    },
+    {
+      "donor_id": "Res-S150",
+      "assigned_stratum": true,
+      "selected_sample_id": "Res-S150",
+      "candidates": [
+        {
+          "sample_id": "Res-S150",
+          "time_value": 0.0,
+          "time_raw": "none (single sample per donor)",
+          "time_field": "timepoint",
+          "group": "adult_sepsis"
+        }
+      ]
+    },
+    {
+      "donor_id": "Skin-S74",
+      "assigned_stratum": true,
+      "selected_sample_id": "Skin-S74",
+      "candidates": [
+        {
+          "sample_id": "Skin-S74",
+          "time_value": 0.0,
+          "time_raw": "none (single sample per donor)",
+          "time_field": "timepoint",
+          "group": "adult_sepsis"
+        }
+      ]
+    },
+    {
+      "donor_id": "Res-S77",
+      "assigned_stratum": true,
+      "selected_sample_id": "Res-S77",
+      "candidates": [
+        {
+          "sample_id": "Res-S77",
+          "time_value": 0.0,
+          "time_raw": "none (single sample per donor)",
+          "time_field": "timepoint",
+          "group": "adult_sepsis"
+        }
+      ]
+    }
+  ],
+  "sha256": "ad30daaf76d46edb695df2ae02cb67f8d8b3ae709630e8ec7ae87056258f9bda"
+}

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/172eafda20f40b51/manifest.json

@@ -0,0 +1,218 @@
+{
+ "schema": "paired_ft_extra_metrics.v1",
+ "dataset": "imperial_eskd",
+ "design": "scored",
+ "unit": "strict",
+ "written_utc": "2026-10-13T00:20:10.738402+00:00",
+ "command": [
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/tools/score_strict.py",
+  "--support-manifest",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/protocol/splits/imperial_eskd/disease/draw0/support.json",
+  "--out",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw0",
+  "--action",
+  "all",
+  "--threads",
+  "4",
+  "--arm",
+  "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/imperial_eskd/disease/draw0/lora.npz",
+  "--arm",
+  "pairedcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/imperial_eskd/disease/draw0/pairedcal.npz",
+  "--arm",
+  "scsemi=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/imperial_eskd/disease/draw0/scsemi.npz",
+  "--arm",
+  "raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/imperial_eskd/raw.npz",
+  "--arm",
+  "refcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/imperial_eskd/refcal.npz"
+ ],
+ "threads": 4,
+ "donors": [
+  "C20_1004",
+  "C20_1404",
+  "C21_1004",
+  "C21_1704",
+  "C21_2504",
+  "C23_2204",
+  "C31_1304",
+  "C31_2004",
+  "C31_2704",
+  "C33_1401",
+  "C33_1601",
+  "C33_1901",
+  "C34_1404",
+  "C34_2104",
+  "C34_2504",
+  "C36_1504",
+  "C36_1704",
+  "C36_2104",
+  "C40_1504",
+  "C40_2204",
+  "C40_0105",
+  "C42_1504",
+  "C42_2204",
+  "C42_2704",
+  "C60_2504",
+  "C63_1704",
+  "C63_2404",
+  "C63_2904",
+  "C65_1704",
+  "C65_2104",
+  "C65_2504",
+  "C69_1804",
+  "C82_2504",
+  "C85_2004",
+  "C93_2104",
+  "C93_2704",
+  "C93_0405",
+  "C101_0601",
+  "C101_1101",
+  "C101_1301",
+  "C101_1801",
+  "C101_2001",
+  "C101_2502",
+  "C103_2204",
+  "C104_2204",
+  "C108_2204",
+  "C108_1501",
+  "C108_1801",
+  "C108_2201",
+  "C113_0605",
+  "C123_2404",
+  "C123_2904",
+  "C123_0505",
+  "C124_2404",
+  "C124_2704",
+  "C124_0105",
+  "C127_2504",
+  "C127_0405",
+  "C127_1105",
+  "C128_2504",
+  "C128_0405",
+  "C128_1105",
+  "C132_2804",
+  "C132_0205",
+  "C132_1105",
+  "C137_3004",
+  "C137_2502",
+  "C138_3004",
+  "C138_2301",
+  "C138_3001",
+  "C138_0202",
+  "C138_0402",
+  "C140_3004",
+  "C140_2801",
+  "C140_3001",
+  "C140_0202",
+  "C140_0402",
+  "C140_0602",
+  "C140_0902",
+  "C140_1103",
+  "C142_3004",
+  "C145_3004",
+  "C145_0701",
+  "C145_1201",
+  "C145_1401",
+  "C145_1901",
+  "C145_2301",
+  "C146_3004",
+  "C146_1201",
+  "C146_1401",
+  "C146_1601",
+  "C146_1901",
+  "C146_2301",
+  "C146_2701",
+  "C146_2502",
+  "C147_3004",
+  "C147_1401",
+  "C147_1901",
+  "C152_0405",
+  "C161_1105",
+  "C164_1105",
+  "C167_1205",
+  "C168_1205",
+  "C168_2001",
+  "C168_2301",
+  "C168_3001",
+  "C168_0202",
+  "C168_0403",
+  "C169_1205",
+  "C169_2001",
+  "C169_2301",
+  "C169_0202",
+  "C169_0403",
+  "C170_1205",
+  "C170_2301",
+  "C170_0202",
+  "C170_0402",
+  "C170_0403",
+  "C187_2605",
+  "C187_1201",
+  "C187_1401",
+  "C187_1901",
+  "C187_2301",
+  "C187_2502",
+  "C190_2605",
+  "C190_2901",
+  "C190_0102",
+  "C190_0302",
+  "C190_0502",
+  "C190_0802",
+  "C190_1002",
+  "C190_0903",
+  "C193_2605",
+  "C195_2605",
+  "C197_2605",
+  "C212_2705",
+  "C214_2705",
+  "C234_2805",
+  "C238_2905",
+  "C240_2905",
+  "C246_2905",
+  "C251_2905"
+ ],
+ "n_samples": 142,
+ "calls": {
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw0/score": {
+   "arms": [
+    "lora",
+    "pairedcal",
+    "scsemi",
+    "raw",
+    "refcal"
+   ],
+   "summary_sha256": "d129eeb3ec48f773ce0b2629848507d14e210d7275394cfe33bd32d1b6da9412"
+  }
+ },
+ "reference_sha256": "34b4caa3f8a60b46d5faf58f09cdaa5622bcce19e4c45d9902a711fead96375e",
+ "bandwidth_m": 25.87528764310995,
+ "params": {
+  "seed": 20261001,
+  "ks": [
+   3,
+   5,
+   10
+  ],
+  "knn_c2st_k": 5,
+  "rf_trees": 300,
+  "cv_folds": 5,
+  "bw_multiples": [
+   0.5,
+   1.0,
+   2.0
+  ],
+  "bw_max_cells": 4000,
+  "en_pcs": 100,
+  "en_lb_max_queries_all_cells": 20000,
+  "en_all_cells": true
+ },
+ "n_representative_rows": null,
+ "fetched_from_server2": [],
+ "code_sha256": {
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/extra_metrics.py": "e76a6cd4c1c5ef7184e97755edcd0f48726b56ba251545a5b5a4b12bb766b0c2",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da"
+ },
+ "seconds": 2353.8,
+ "max_abs_diff_k10_pooled": 0.0
+}

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/4322af20fb8695f4/summary.json

@@ -0,0 +1,212 @@
+{
+ "schema": "paired_ft_scores.v1",
+ "dataset": "immicro",
+ "written_utc": "2026-10-15T12:00:39.457939+00:00",
+ "command": [
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
+  "--dataset",
+  "immicro",
+  "--out",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold1/n20/lora/score",
+  "--donors",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold1/n20/lora/test_sample_ids.txt",
+  "--threads",
+  "2",
+  "--arm",
+  "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold1/n20/lora.npz",
+  "--no-contrast",
+  "--no-deg"
+ ],
+ "arms": [
+  "lora"
+ ],
+ "donors": [
+  "HS2",
+  "HS12",
+  "HS16",
+  "HS17",
+  "HS21",
+  "HS35",
+  "HS36",
+  "HS39",
+  "HS44",
+  "HS46",
+  "HS47",
+  "HS48",
+  "HS51",
+  "HS56",
+  "HS57",
+  "HS65",
+  "HS68",
+  "HS72",
+  "HS84",
+  "HS92",
+  "HS96",
+  "HS109"
+ ],
+ "n_donors": 22,
+ "reference": {
+  "cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/immicro",
+  "reference_sha256": "c5e2547be3ec3b12cb0c0b404a49e14a046ae59d40be70427f98f083a76bce17",
+  "features_sha256": "735255066ce7ebbac13a1fdfd058e26f31edd60314cc02fd589b0a292dbbc838",
+  "n_r1_cells": 3300,
+  "pca": {
+   "n_components": 50,
+   "explained_variance_ratio_sum": 0.2977375388145447,
+   "n_fit_cells": 3300
+  },
+  "r2_control": {
+   "precision": 0.9954545454545455,
+   "coverage": 1.0,
+   "density": 2.5628484848484847,
+   "n_query": 3300,
+   "depth_matched": {
+    "precision": 0.9942424242424243,
+    "coverage": 1.0,
+    "density": 2.5162121212121216
+   }
+  },
+  "observed_l1_loo_null_mean": 0.1502983690725227
+ },
+ "contrast_definition": {
+  "enabled": false,
+  "reason": "--no-contrast"
+ },
+ "deg_definition": {
+  "enabled": false,
+  "reason": "--no-deg"
+ },
+ "headline": {
+  "lora": {
+   "comp_l1": 0.20009398789615684,
+   "comp_l1_obs_loo_null": 0.1502983690725227,
+   "precision": 0.9875757575757576,
+   "coverage": 0.8787878787878788,
+   "precision_dm": 0.9912121212121212,
+   "coverage_dm": 0.9896969696969697,
+   "pb_r_median": 0.8957967836958525,
+   "pb_top1": 0.09090909090909091,
+   "mono_pct_gen": 10.724242424242426,
+   "mono_pct_obs": 15.179849365920914,
+   "median_umi_gen": 2551.0,
+   "median_umi_obs": 1887.0,
+   "seconds": 6.9
+  }
+ },
+ "per_arm": {
+  "lora": {
+   "arm": "lora",
+   "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold1/n20/lora.npz",
+   "npz_sha256": "8d28a5c114dbf6a4a5075438bc212fc5871ef6c4a1ead7b87c75e32e46aca4bc",
+   "receipt_verified": true,
+   "generation": {
+    "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/immicro/healthy/fold1/n20/lora/checkpoint_ft.pt",
+    "checkpoint_sha256": "080147b5e9eb9c60723f4d91d259235bb059550c9588fa90e0f814c1a95ce14c",
+    "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold1/n20/test_raw.npz",
+    "input_condition_sha256": "f64c30e0d9cd130f95402573ee1b53826b57447fb3d7e8de727481c86f243d9d",
+    "seed": 20260928,
+    "steps": 50,
+    "support_readout": "bernoulli",
+    "weights": "ema"
+   },
+   "condition_for_broadcast": null,
+   "poisson": {
+    "seed": 20260916,
+    "rule": "whole NPZ, rows in NPZ order",
+    "nnz_whole_npz": 8812388,
+    "median_library_whole_npz_panel": 2552.0,
+    "n_rows_whole_npz": 33000
+   },
+   "annotation": {
+    "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
+    "zero_padded_model_genes": 1,
+    "label_counts": {
+     "T cell": 23819,
+     "Monocyte": 3539,
+     "B cell": 2559,
+     "NK cell": 1765,
+     "DC": 879,
+     "Other": 439
+    },
+    "mean_l2_max_prob": 0.9157852184767976,
+    "predict_seconds": 3.1
+   },
+   "n_donors": 22,
+   "n_generated_cells": 33000,
+   "composition": {
+    "l1_mean": 0.20009398789615684,
+    "l1_median": 0.19486449481028295,
+    "l1_obs_loo_null_mean": 0.1502983690725227,
+    "l1_generated_loo_mean_vs_observed_mean": 0.21007490761754333,
+    "composition_top1": 0.09090909090909091,
+    "mean_fraction_generated": {
+     "T cell": 0.721788,
+     "B cell": 0.077545,
+     "Monocyte": 0.107242,
+     "NK cell": 0.053485,
+     "DC": 0.026636,
+     "Other": 0.013303
+    },
+    "mean_fraction_observed": {
+     "T cell": 0.648212,
+     "B cell": 0.075565,
+     "Monocyte": 0.151798,
+     "NK cell": 0.094479,
+     "DC": 0.024449,
+     "Other": 0.005497
+    }
+   },
+   "pseudobulk": {
+    "n_genes": 5508,
+    "r_median": 0.8957967836958525,
+    "r_mean": 0.8951739881987126,
+    "top1": 0.09090909090909091,
+    "n_top1": 2,
+    "own_rank_median": 9.5,
+    "chance_top1": 0.045454545454545456
+   },
+   "precision_coverage": {
+    "precision": 0.9875757575757576,
+    "coverage": 0.8787878787878788,
+    "density": 2.6176060606060605,
+    "n_query": 3300,
+    "n_reference": 3300
+   },
+   "precision_coverage_depth_matched": {
+    "precision": 0.9912121212121212,
+    "coverage": 0.9896969696969697,
+    "density": 4.302030303030303,
+    "detected_median_before": {
+     "R1": 356.0,
+     "Q": 258.0
+    },
+    "detected_median_after": {
+     "R1": 258.0,
+     "Q": 258.0
+    }
+   },
+   "monocyte_pct": {
+    "generated_mean_over_donors": 10.724242424242426,
+    "observed_mean_over_donors": 15.179849365920914,
+    "generated_pooled_cells": 10.724242424242423
+   },
+   "median_umi_per_cell_scoring_genes": {
+    "generated_pooled": 2551.0,
+    "observed_pooled": 1887.0,
+    "generated_mean_of_donor_medians": 2562.136474609375,
+    "observed_mean_of_donor_medians": 1946.340909090909
+   },
+   "seconds": 6.9
+  }
+ },
+ "code_sha256": {
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py": "48b12d794782b840838853e93e0fc55fab00532c4b3698f4588e926b985d2881",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/immicro/tools/immicro_common.py": "c5c30e917148cc5e664e91ea30c11bbdff9b6d1f53a3e0a13e16b1917eff37e9",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/predict_scanvi.py": "482ee5dcf4d72b54bc36cbb6dcff62e5030bc7afc46cb5fb01eca73a82ee45a5",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/poisson_readout.py": "8bfa080942fbcdc89ae23b276524a1a83266fb8cbc56b9af279e50f82e6cde38"
+ },
+ "seconds": 8.9
+}

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/841049689ef4839a/summary.json

@@ -0,0 +1,1887 @@
+{
+ "schema": "paired_ft_scores.v1",
+ "dataset": "ye2026_sepsis",
+ "written_utc": "2026-10-12T14:57:01.801319+00:00",
+ "command": [
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
+  "--dataset",
+  "ye2026_sepsis",
+  "--out",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/ye2026_sepsis/disease/draw0/score",
+  "--donors",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/ye2026_sepsis/disease/draw0/test_sample_ids.txt",
+  "--threads",
+  "4",
+  "--arm",
+  "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw0/lora.npz",
+  "--arm",
+  "pairedcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw0/pairedcal.npz",
+  "--arm",
+  "scsemi=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw0/scsemi.npz",
+  "--arm",
+  "raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/raw.npz",
+  "--arm",
+  "refcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/refcal.npz",
+  "--case-groups",
+  "adult_sepsis,ped_sepsis",
+  "--control-groups",
+  "adult_HC,adult_ICU_ctrl,ped_HC,ped_ICU_ctrl"
+ ],
+ "arms": [
+  "lora",
+  "pairedcal",
+  "scsemi",
+  "raw",
+  "refcal"
+ ],
+ "donors": [
+  "Abd-PS04",
+  "Abd-PS05",
+  "Abd-PS07",
+  "Abd-PS19",
+  "Abd-PS20",
+  "Abd-PS23",
+  "Abd-PS27",
+  "Abd-S102",
+  "Abd-S103",
+  "Abd-S120",
+  "Abd-S123",
+  "Abd-S156",
+  "Abd-S39",
+  "Abd-S42",
+  "Abd-S47",
+  "Abd-S51",
+  "Abd-S54",
+  "Abd-S57",
+  "Abd-S79",
+  "Abd-S83",
+  "Abd-S98",
+  "HC01",
+  "HC05",
+  "HC09",
+  "HC12",
+  "HC13",
+  "HC16",
+  "IC10",
+  "IC15",
+  "IC16",
+  "IC19",
+  "IC22",
+  "IC23",
+  "PHC01",
+  "PHC02",
+  "PHC03",
+  "PHC05",
+  "PIC01",
+  "PIC02",
+  "PIC04",
+  "PIC05",
+  "Res-PS02",
+  "Res-PS03",
+  "Res-PS12",
+  "Res-PS16",
+  "Res-PS21",
+  "Res-PS22",
+  "Res-PS25",
+  "Res-PS26",
+  "Res-S10",
+  "Res-S125",
+  "Res-S127",
+  "Res-S136",
+  "Res-S139",
+  "Res-S146",
+  "Res-S149",
+  "Res-S164",
+  "Res-S166",
+  "Res-S174",
+  "Res-S177",
+  "Res-S184",
+  "Res-S19",
+  "Res-S26",
+  "Res-S40",
+  "Res-S87",
+  "Skin-S140",
+  "Skin-S142",
+  "Skin-S152",
+  "Skin-S38",
+  "Skin-S43",
+  "Skin-S46",
+  "Skin-S52",
+  "Uri-S134",
+  "Uri-S147",
+  "Uri-S157",
+  "Uri-S20",
+  "Uri-S93"
+ ],
+ "n_donors": 77,
+ "reference": {
+  "cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/ye2026_sepsis",
+  "reference_sha256": "bac12da8a241652cb75100a1b082b2be56806c9bf2fd20ce6f927f19683ea5b8",
+  "features_sha256": "0cfda4b0cf1caf5e5319d071697c228d894e992fd090e2b3ed450bd6c9887d46",
+  "n_r1_cells": 11550,
+  "pca": {
+   "n_components": 50,
+   "explained_variance_ratio_sum": 0.3363947570323944,
+   "n_fit_cells": 11550
+  },
+  "r2_control": {
+   "precision": 0.9814718614718615,
+   "coverage": 0.9997402597402597,
+   "density": 1.308891774891775,
+   "n_query": 11550,
+   "depth_matched": {
+    "precision": 0.9809523809523809,
+    "coverage": 0.9996536796536797,
+    "density": 1.2988051948051949
+   }
+  },
+  "observed_l1_loo_null_mean": 0.5124478114694226
+ },
+ "contrast_definition": {
+  "enabled": true,
+  "rule": "explicit --case-groups / --control-groups",
+  "group_source": "features groups",
+  "case_groups": [
+   "adult_sepsis",
+   "ped_sepsis"
+  ],
+  "control_groups": [
+   "adult_HC",
+   "adult_ICU_ctrl",
+   "ped_HC",
+   "ped_ICU_ctrl"
+  ],
+  "n_case_donors": 57,
+  "n_control_donors": 20,
+  "n_donors_in_neither": 0,
+  "case": [
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true
+  ],
+  "ctrl": [
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   true,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false,
+   false
+  ],
+  "groups": [
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_HC",
+   "adult_HC",
+   "adult_HC",
+   "adult_HC",
+   "adult_HC",
+   "adult_HC",
+   "adult_ICU_ctrl",
+   "adult_ICU_ctrl",
+   "adult_ICU_ctrl",
+   "adult_ICU_ctrl",
+   "adult_ICU_ctrl",
+   "adult_ICU_ctrl",
+   "ped_HC",
+   "ped_HC",
+   "ped_HC",
+   "ped_HC",
+   "ped_ICU_ctrl",
+   "ped_ICU_ctrl",
+   "ped_ICU_ctrl",
+   "ped_ICU_ctrl",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "ped_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis",
+   "adult_sepsis"
+  ]
+ },
+ "deg_definition": {
+  "enabled": true,
+  "score": "top-50 DEG overlap per cell type (benchmark total_top50_overlap, Welch backend)",
+  "source": "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py",
+  "functions": [
+   "welch_bh_deg",
+   "top_deg_genes",
+   "jaccard"
+  ],
+  "reproduces": "utility_studies_final6k_20260925/sle top-50 DEG 81 (1,006 genes) / 84 (2,279 genes) = sum over the six gated types of top50_overlap_count",
+  "top_n": 50,
+  "fdr": 0.05,
+  "n_genes": 5975,
+  "types": [
+   "T cell",
+   "B cell",
+   "Monocyte",
+   "NK cell",
+   "DC"
+  ],
+  "aggregates_source": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/ye2026_sepsis/deg_reference.npz",
+  "aggregates_sha256": "9886ea64da90b1db6a07984d5d61d7dab04ee0beee7d4094ee3672316c2691d0",
+  "aggregates_note": null,
+  "types_not_scored_observed": [],
+  "observed": {
+   "T cell": {
+    "n_significant": 1558,
+    "n_tested": 5807,
+    "n_case_donors": 57,
+    "n_control_donors": 20,
+    "n_cells": 281037,
+    "top_list_size": 50
+   },
+   "B cell": {
+    "n_significant": 1022,
+    "n_tested": 5745,
+    "n_case_donors": 57,
+    "n_control_donors": 20,
+    "n_cells": 94421,
+    "top_list_size": 50
+   },
+   "Monocyte": {
+    "n_significant": 2259,
+    "n_tested": 5751,
+    "n_case_donors": 57,
+    "n_control_donors": 20,
+    "n_cells": 106918,
+    "top_list_size": 50
+   },
+   "NK cell": {
+    "n_significant": 1095,
+    "n_tested": 5606,
+    "n_case_donors": 57,
+    "n_control_donors": 20,
+    "n_cells": 42712,
+    "top_list_size": 50
+   },
+   "DC": {
+    "n_significant": 1229,
+    "n_tested": 5318,
+    "n_case_donors": 54,
+    "n_control_donors": 20,
+    "n_cells": 3096,
+    "top_list_size": 50
+   }
+  },
+  "broadcast": "welch_bh_deg + top_deg_genes on the arm's condition bulk_counts (scoring genes, case|control donors), one list compared with every type's observed list (sle_broadcast.py broadcast_input_bulk); not part of the published benchmark"
+ },
+ "headline": {
+  "lora": {
+   "comp_l1": 0.4723339700492085,
+   "comp_l1_obs_loo_null": 0.5124478114694226,
+   "precision": 0.9204329004329004,
+   "coverage": 0.7028571428571428,
+   "precision_dm": 0.930995670995671,
+   "coverage_dm": 0.8202597402597402,
+   "pb_r_median": 0.8779789476153056,
+   "pb_top1": 0.05194805194805195,
+   "mono_pct_gen": 11.22770562770563,
+   "mono_pct_obs": 21.155399396302027,
+   "median_umi_gen": 1872.0,
+   "median_umi_obs": 1966.0,
+   "contrast_mean_cp10k_r_gen": 0.41474826807294785,
+   "contrast_pseudobulk_log1p_cpm_r_gen": 0.4109247429632481,
+   "contrast_mean_cp10k_r_broadcast": 0.3359901153517466,
+   "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.29887757498279155,
+   "deg_top50_T": 1,
+   "deg_top50_B": 4,
+   "deg_top50_Mono": 5,
+   "deg_top50_NK": 0,
+   "deg_top50_DC": 0,
+   "deg_top50_sum": 10,
+   "deg_top50_max": 250,
+   "deg_top50_sum_4type": 10,
+   "deg_top50_sum_broadcast": 23,
+   "seconds": 18.2
+  },
+  "pairedcal": {
+   "comp_l1": 0.45447540484704807,
+   "comp_l1_obs_loo_null": 0.5124478114694226,
+   "precision": 0.8942857142857142,
+   "coverage": 0.4682251082251082,
+   "precision_dm": 0.9078787878787878,
+   "coverage_dm": 0.682943722943723,
+   "pb_r_median": 0.8547751160943624,
+   "pb_top1": 0.03896103896103896,
+   "mono_pct_gen": 14.25108225108225,
+   "mono_pct_obs": 21.155399396302027,
+   "median_umi_gen": 2086.0,
+   "median_umi_obs": 1966.0,
+   "contrast_mean_cp10k_r_gen": 0.07147477021573559,
+   "contrast_pseudobulk_log1p_cpm_r_gen": 0.026477798832708316,
+   "contrast_mean_cp10k_r_broadcast": 0.31785066986073157,
+   "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.2854330793925586,
+   "deg_top50_T": 4,
+   "deg_top50_B": 0,
+   "deg_top50_Mono": 6,
+   "deg_top50_NK": 2,
+   "deg_top50_DC": 0,
+   "deg_top50_sum": 12,
+   "deg_top50_max": 250,
+   "deg_top50_sum_4type": 12,
+   "deg_top50_sum_broadcast": 25,
+   "seconds": 18.2
+  },
+  "scsemi": {
+   "comp_l1": 0.6759019523396683,
+   "comp_l1_obs_loo_null": 0.5124478114694226,
+   "precision": 0.7842424242424243,
+   "coverage": 0.061731601731601735,
+   "precision_dm": 0.5558441558441558,
+   "coverage_dm": 0.11021645021645021,
+   "pb_r_median": 0.5209609426056898,
+   "pb_top1": 0.03896103896103896,
+   "mono_pct_gen": 6.941991341991343,
+   "mono_pct_obs": 21.155399396302027,
+   "median_umi_gen": 1982.0,
+   "median_umi_obs": 1966.0,
+   "contrast_mean_cp10k_r_gen": 0.41261269281974167,
+   "contrast_pseudobulk_log1p_cpm_r_gen": 0.24570200234567183,
+   "contrast_mean_cp10k_r_broadcast": 0.3359901153517466,
+   "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.29887757498279155,
+   "deg_top50_T": 0,
+   "deg_top50_B": 0,
+   "deg_top50_Mono": 0,
+   "deg_top50_NK": 0,
+   "deg_top50_DC": 0,
+   "deg_top50_sum": 0,
+   "deg_top50_max": 250,
+   "deg_top50_sum_4type": 0,
+   "deg_top50_sum_broadcast": 23,
+   "seconds": 15.9
+  },
+  "raw": {
+   "comp_l1": 0.49487224191956,
+   "comp_l1_obs_loo_null": 0.5124478114694226,
+   "precision": 0.6412987012987013,
+   "coverage": 0.0735930735930736,
+   "precision_dm": 0.6367099567099567,
+   "coverage_dm": 0.06961038961038961,
+   "pb_r_median": 0.8790362717870047,
+   "pb_top1": 0.09090909090909091,
+   "mono_pct_gen": 36.28658008658008,
+   "mono_pct_obs": 21.155399396302027,
+   "median_umi_gen": 981.0,
+   "median_umi_obs": 1966.0,
+   "contrast_mean_cp10k_r_gen": -0.02260908697845984,
+   "contrast_pseudobulk_log1p_cpm_r_gen": 0.04437209257925205,
+   "contrast_mean_cp10k_r_broadcast": 0.3359901153517466,
+   "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.29887757498279155,
+   "deg_top50_T": 3,
+   "deg_top50_B": 0,
+   "deg_top50_Mono": 4,
+   "deg_top50_NK": 3,
+   "deg_top50_DC": 1,
+   "deg_top50_sum": 11,
+   "deg_top50_max": 250,
+   "deg_top50_sum_4type": 10,
+   "deg_top50_sum_broadcast": 23,
+   "seconds": 19.9
+  },
+  "refcal": {
+   "comp_l1": 0.4053608819589077,
+   "comp_l1_obs_loo_null": 0.5124478114694226,
+   "precision": 0.8391341991341992,
+   "coverage": 0.19411255411255413,
+   "precision_dm": 0.7924675324675324,
+   "coverage_dm": 0.379047619047619,
+   "pb_r_median": 0.8484697595735529,
+   "pb_top1": 0.16883116883116883,
+   "mono_pct_gen": 27.403463203463208,
+   "mono_pct_obs": 21.155399396302027,
+   "median_umi_gen": 1560.0,
+   "median_umi_obs": 1966.0,
+   "contrast_mean_cp10k_r_gen": 0.1502754171202515,
+   "contrast_pseudobulk_log1p_cpm_r_gen": 0.15682282936099654,
+   "contrast_mean_cp10k_r_broadcast": 0.25469199059982894,
+   "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.29888152866012047,
+   "deg_top50_T": 3,
+   "deg_top50_B": 2,
+   "deg_top50_Mono": 5,
+   "deg_top50_NK": 0,
+   "deg_top50_DC": 0,
+   "deg_top50_sum": 10,
+   "deg_top50_max": 250,
+   "deg_top50_sum_4type": 10,
+   "deg_top50_sum_broadcast": 12,
+   "seconds": 18.1
+  }
+ },
+ "per_arm": {
+  "lora": {
+   "arm": "lora",
+   "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw0/lora.npz",
+   "npz_sha256": "823ee652c0cb8be8f822bd48bbdb4d4368b8aca5a075f423159acc3c66be8842",
+   "receipt_verified": true,
+   "generation": {
+    "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/ye2026_sepsis/disease/draw0/lora/checkpoint_ft.pt",
+    "checkpoint_sha256": "975c5cba97d22ef88de879d5d8abf85a0b51fa7853629de6748ab31ef6848d95",
+    "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw0/test_raw.npz",
+    "input_condition_sha256": "ae163d5eb1531842e2acea7db21a0a500f7642767566cdc639be42951543bba9",
+    "seed": 20260928,
+    "steps": 50,
+    "support_readout": "bernoulli",
+    "weights": "ema"
+   },
+   "condition_for_broadcast": {
+    "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw0/test_raw.npz",
+    "sha256": "ae163d5eb1531842e2acea7db21a0a500f7642767566cdc639be42951543bba9"
+   },
+   "poisson": {
+    "seed": 20260916,
+    "rule": "whole NPZ, rows in NPZ order",
+    "nnz_whole_npz": 33623064,
+    "median_library_whole_npz_panel": 1872.0,
+    "n_rows_whole_npz": 115500
+   },
+   "annotation": {
+    "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
+    "zero_padded_model_genes": 0,
+    "label_counts": {
+     "T cell": 67240,
+     "B cell": 23888,
+     "Monocyte": 12968,
+     "NK cell": 7800,
+     "Other": 3173,
+     "DC": 431
+    },
+    "mean_l2_max_prob": 0.9180328375431366,
+    "predict_seconds": 4.0
+   },
+   "n_donors": 77,
+   "n_generated_cells": 115500,
+   "composition": {
+    "l1_mean": 0.4723339700492085,
+    "l1_median": 0.4318308345424257,
+    "l1_obs_loo_null_mean": 0.5124478114694226,
+    "l1_generated_loo_mean_vs_observed_mean": 0.5321168782597643,
+    "composition_top1": 0.012987012987012988,
+    "mean_fraction_generated": {
+     "T cell": 0.582165,
+     "B cell": 0.206823,
+     "Monocyte": 0.112277,
+     "NK cell": 0.067532,
+     "DC": 0.003732,
+     "Other": 0.027472
+    },
+    "mean_fraction_observed": {
+     "T cell": 0.483195,
+     "B cell": 0.172444,
+     "Monocyte": 0.211554,
+     "NK cell": 0.077692,
+     "DC": 0.005624,
+     "Other": 0.049491
+    }
+   },
+   "pseudobulk": {
+    "n_genes": 5975,
+    "r_median": 0.8779789476153056,
+    "r_mean": 0.8753088811606912,
+    "top1": 0.05194805194805195,
+    "n_top1": 4,
+    "own_rank_median": 15.0,
+    "chance_top1": 0.012987012987012988
+   },
+   "precision_coverage": {
+    "precision": 0.9204329004329004,
+    "coverage": 0.7028571428571428,
+    "density": 0.7244329004329004,
+    "n_query": 11550,
+    "n_reference": 11550
+   },
+   "precision_coverage_depth_matched": {
+    "precision": 0.930995670995671,
+    "coverage": 0.8202597402597402,
+    "density": 1.040008658008658,
+    "detected_median_before": {
+     "R1": 407.0,
+     "Q": 289.0
+    },
+    "detected_median_after": {
+     "R1": 288.0,
+     "Q": 288.0
+    }
+   },
+   "monocyte_pct": {
+    "generated_mean_over_donors": 11.22770562770563,
+    "observed_mean_over_donors": 21.155399396302027,
+    "generated_pooled_cells": 11.227705627705628
+   },
+   "median_umi_per_cell_scoring_genes": {
+    "generated_pooled": 1872.0,
+    "observed_pooled": 1966.0,
+    "generated_mean_of_donor_medians": 1877.2012939453125,
+    "observed_mean_of_donor_medians": 2122.2662337662337
+   },
+   "contrast": {
+    "mean_cp10k": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.44250811255156813,
+       "r_broadcast": 0.28779071017741836,
+       "partial_r_generated_given_broadcast": 0.42425247150749934,
+       "r_generated_vs_broadcast": 0.13963168765298692,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.6126588206411031,
+       "r_broadcast": 0.30092059959087647,
+       "partial_r_generated_given_broadcast": 0.5982188904643525,
+       "r_generated_vs_broadcast": 0.16663590799621922,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.2798754470555321,
+       "r_broadcast": 0.5511838088445075,
+       "partial_r_generated_given_broadcast": 0.20782074676912088,
+       "r_generated_vs_broadcast": 0.19949566774355176,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": 0.3239506920435882,
+       "r_broadcast": 0.20406534279418406,
+       "partial_r_generated_given_broadcast": 0.2985800825917289,
+       "r_generated_vs_broadcast": 0.17798519461006979,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.41474826807294785,
+     "mean_r_broadcast": 0.3359901153517466,
+     "mean_partial_r": 0.3822180478331754
+    },
+    "pseudobulk_log1p_cpm": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.4595790245757979,
+       "r_broadcast": 0.23446571402689154,
+       "partial_r_generated_given_broadcast": 0.4432131724297314,
+       "r_generated_vs_broadcast": 0.14080059034705616,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.5489935557543413,
+       "r_broadcast": 0.2824129554276003,
+       "partial_r_generated_given_broadcast": 0.5232759088194978,
+       "r_generated_vs_broadcast": 0.20378927885737907,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.35673737440718756,
+       "r_broadcast": 0.6171521141280452,
+       "partial_r_generated_given_broadcast": 0.23838903023994107,
+       "r_generated_vs_broadcast": 0.28687689205588246,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": 0.2783890171156659,
+       "r_broadcast": 0.06147951634862929,
+       "partial_r_generated_given_broadcast": 0.2735348308285391,
+       "r_generated_vs_broadcast": 0.11884535877415196,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.4109247429632481,
+     "mean_r_broadcast": 0.29887757498279155,
+     "mean_partial_r": 0.3696032355794273
+    }
+   },
+   "deg_top50": {
+    "types_scored": [
+     "T cell",
+     "B cell",
+     "Monocyte",
+     "NK cell",
+     "DC"
+    ],
+    "types_not_scored": {},
+    "per_type": {
+     "T cell": {
+      "deg_scored": true,
+      "top50_overlap": 1,
+      "top50_jaccard": 0.010101010101010102,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 4,
+      "top50_jaccard_broadcast": 0.041666666666666664,
+      "n_cells_obs": 281037,
+      "n_cells_gen": 67240
+     },
+     "B cell": {
+      "deg_scored": true,
+      "top50_overlap": 4,
+      "top50_jaccard": 0.041666666666666664,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 3,
+      "top50_jaccard_broadcast": 0.030927835051546393,
+      "n_cells_obs": 94421,
+      "n_cells_gen": 23888
+     },
+     "Monocyte": {
+      "deg_scored": true,
+      "top50_overlap": 5,
+      "top50_jaccard": 0.06097560975609756,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 37,
+      "top50_overlap_broadcast": 13,
+      "top50_jaccard_broadcast": 0.14942528735632185,
+      "n_cells_obs": 106918,
+      "n_cells_gen": 12968
+     },
+     "NK cell": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 9,
+      "top50_overlap_broadcast": 2,
+      "top50_jaccard_broadcast": 0.02040816326530612,
+      "n_cells_obs": 42712,
+      "n_cells_gen": 7800
+     },
+     "DC": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 0,
+      "top50_overlap_broadcast": 1,
+      "top50_jaccard_broadcast": 0.010101010101010102,
+      "n_cells_obs": 3096,
+      "n_cells_gen": 431
+     }
+    },
+    "sum": 10,
+    "sum_4type": 10,
+    "max": 250,
+    "mean": 2.0,
+    "sum_broadcast": 23,
+    "sum_broadcast_4type": 22,
+    "broadcast_n_significant": 1101,
+    "seconds": 0.22
+   },
+   "seconds": 18.2
+  },
+  "pairedcal": {
+   "arm": "pairedcal",
+   "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw0/pairedcal.npz",
+   "npz_sha256": "ee533342c8f2eb0518ead360fc788db7864238e3e48146c6a6e85953543308b0",
+   "receipt_verified": true,
+   "generation": {
+    "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
+    "checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
+    "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw0/test_cal.npz",
+    "input_condition_sha256": "e60564d1fa5edb4cd0bfac405e6ce84aa4a810af06ee0a2d16187219f768baaa",
+    "seed": 20260928,
+    "steps": 50,
+    "support_readout": "bernoulli",
+    "weights": "ema"
+   },
+   "condition_for_broadcast": {
+    "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw0/test_cal.npz",
+    "sha256": "e60564d1fa5edb4cd0bfac405e6ce84aa4a810af06ee0a2d16187219f768baaa"
+   },
+   "poisson": {
+    "seed": 20260916,
+    "rule": "whole NPZ, rows in NPZ order",
+    "nnz_whole_npz": 30979744,
+    "median_library_whole_npz_panel": 2086.0,
+    "n_rows_whole_npz": 115500
+   },
+   "annotation": {
+    "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
+    "zero_padded_model_genes": 0,
+    "label_counts": {
+     "T cell": 65673,
+     "B cell": 23955,
+     "Monocyte": 16460,
+     "NK cell": 5618,
+     "Other": 2845,
+     "DC": 949
+    },
+    "mean_l2_max_prob": 0.9244277445502354,
+    "predict_seconds": 4.2
+   },
+   "n_donors": 77,
+   "n_generated_cells": 115500,
+   "composition": {
+    "l1_mean": 0.45447540484704807,
+    "l1_median": 0.47048950610019225,
+    "l1_obs_loo_null_mean": 0.5124478114694226,
+    "l1_generated_loo_mean_vs_observed_mean": 0.5245517300185519,
+    "composition_top1": 0.03896103896103896,
+    "mean_fraction_generated": {
+     "T cell": 0.568597,
+     "B cell": 0.207403,
+     "Monocyte": 0.142511,
+     "NK cell": 0.048641,
+     "DC": 0.008216,
+     "Other": 0.024632
+    },
+    "mean_fraction_observed": {
+     "T cell": 0.483195,
+     "B cell": 0.172444,
+     "Monocyte": 0.211554,
+     "NK cell": 0.077692,
+     "DC": 0.005624,
+     "Other": 0.049491
+    }
+   },
+   "pseudobulk": {
+    "n_genes": 5975,
+    "r_median": 0.8547751160943624,
+    "r_mean": 0.8529662825265254,
+    "top1": 0.03896103896103896,
+    "n_top1": 3,
+    "own_rank_median": 12.0,
+    "chance_top1": 0.012987012987012988
+   },
+   "precision_coverage": {
+    "precision": 0.8942857142857142,
+    "coverage": 0.4682251082251082,
+    "density": 0.5134112554112554,
+    "n_query": 11550,
+    "n_reference": 11550
+   },
+   "precision_coverage_depth_matched": {
+    "precision": 0.9078787878787878,
+    "coverage": 0.682943722943723,
+    "density": 0.8116969696969697,
+    "detected_median_before": {
+     "R1": 407.0,
+     "Q": 264.0
+    },
+    "detected_median_after": {
+     "R1": 264.0,
+     "Q": 264.0
+    }
+   },
+   "monocyte_pct": {
+    "generated_mean_over_donors": 14.25108225108225,
+    "observed_mean_over_donors": 21.155399396302027,
+    "generated_pooled_cells": 14.25108225108225
+   },
+   "median_umi_per_cell_scoring_genes": {
+    "generated_pooled": 2086.0,
+    "observed_pooled": 1966.0,
+    "generated_mean_of_donor_medians": 2100.441650390625,
+    "observed_mean_of_donor_medians": 2122.2662337662337
+   },
+   "contrast": {
+    "mean_cp10k": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.009457169718469546,
+       "r_broadcast": 0.2534298714970376,
+       "partial_r_generated_given_broadcast": -0.09852305907597497,
+       "r_generated_vs_broadcast": 0.3844772666497013,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.1497023985685681,
+       "r_broadcast": 0.3044009112895693,
+       "partial_r_generated_given_broadcast": 0.05868200335067193,
+       "r_generated_vs_broadcast": 0.3176754969650193,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.17308652075053677,
+       "r_broadcast": 0.5505985482192228,
+       "partial_r_generated_given_broadcast": 0.045921488160870175,
+       "r_generated_vs_broadcast": 0.24689377051168912,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": -0.04634700817463206,
+       "r_broadcast": 0.16297334843709654,
+       "partial_r_generated_given_broadcast": -0.10304769048322589,
+       "r_generated_vs_broadcast": 0.3089423295269624,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.07147477021573559,
+     "mean_r_broadcast": 0.31785066986073157,
+     "mean_partial_r": -0.024241814511914688
+    },
+    "pseudobulk_log1p_cpm": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.0213416463744691,
+       "r_broadcast": 0.22376608520069113,
+       "partial_r_generated_given_broadcast": -0.09164535752704163,
+       "r_generated_vs_broadcast": 0.4515381059073401,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.1799628254748109,
+       "r_broadcast": 0.2744568452678971,
+       "partial_r_generated_given_broadcast": 0.10174319785648342,
+       "r_generated_vs_broadcast": 0.31770187799602523,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.010564497772008335,
+       "r_broadcast": 0.5993955366367579,
+       "partial_r_generated_given_broadcast": -0.1875240555090142,
+       "r_generated_vs_broadcast": 0.2594741202175935,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": -0.10595777429045508,
+       "r_broadcast": 0.044113850464888166,
+       "partial_r_generated_given_broadcast": -0.12409873048329856,
+       "r_generated_vs_broadcast": 0.288766874882447,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.026477798832708316,
+     "mean_r_broadcast": 0.2854330793925586,
+     "mean_partial_r": -0.07538123641571774
+    }
+   },
+   "deg_top50": {
+    "types_scored": [
+     "T cell",
+     "B cell",
+     "Monocyte",
+     "NK cell",
+     "DC"
+    ],
+    "types_not_scored": {},
+    "per_type": {
+     "T cell": {
+      "deg_scored": true,
+      "top50_overlap": 4,
+      "top50_jaccard": 0.041666666666666664,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 5,
+      "top50_jaccard_broadcast": 0.05263157894736842,
+      "n_cells_obs": 281037,
+      "n_cells_gen": 65673
+     },
+     "B cell": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 3,
+      "top50_jaccard_broadcast": 0.030927835051546393,
+      "n_cells_obs": 94421,
+      "n_cells_gen": 23955
+     },
+     "Monocyte": {
+      "deg_scored": true,
+      "top50_overlap": 6,
+      "top50_jaccard": 0.06382978723404255,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 13,
+      "top50_jaccard_broadcast": 0.14942528735632185,
+      "n_cells_obs": 106918,
+      "n_cells_gen": 16460
+     },
+     "NK cell": {
+      "deg_scored": true,
+      "top50_overlap": 2,
+      "top50_jaccard": 0.029411764705882353,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 20,
+      "top50_overlap_broadcast": 3,
+      "top50_jaccard_broadcast": 0.030927835051546393,
+      "n_cells_obs": 42712,
+      "n_cells_gen": 5618
+     },
+     "DC": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 1,
+      "top50_overlap_broadcast": 1,
+      "top50_jaccard_broadcast": 0.010101010101010102,
+      "n_cells_obs": 3096,
+      "n_cells_gen": 949
+     }
+    },
+    "sum": 12,
+    "sum_4type": 12,
+    "max": 250,
+    "mean": 2.4,
+    "sum_broadcast": 25,
+    "sum_broadcast_4type": 24,
+    "broadcast_n_significant": 1167,
+    "seconds": 0.21
+   },
+   "seconds": 18.2
+  },
+  "scsemi": {
+   "arm": "scsemi",
+   "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw0/scsemi.npz",
+   "npz_sha256": "80d99f5363d0fd7b967070fe1e8e716a05c86869edd31757c4e7cac5bf7ef29f",
+   "receipt_verified": true,
+   "generation": {
+    "checkpoint": null,
+    "checkpoint_sha256": null,
+    "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/fewshot_n5/draw0/test_raw.npz",
+    "input_condition_sha256": "ae163d5eb1531842e2acea7db21a0a500f7642767566cdc639be42951543bba9",
+    "seed": 20260927,
+    "steps": null,
+    "support_readout": "upstream (values <= 10 normalized units zeroed by fast_semi)",
+    "weights": null
+   },
+   "condition_for_broadcast": {
+    "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/fewshot_n5/draw0/test_raw.npz",
+    "sha256": "ae163d5eb1531842e2acea7db21a0a500f7642767566cdc639be42951543bba9"
+   },
+   "poisson": {
+    "seed": 20260916,
+    "rule": "whole NPZ, rows in NPZ order",
+    "nnz_whole_npz": 11853572,
+    "median_library_whole_npz_panel": 1982.0,
+    "n_rows_whole_npz": 115500
+   },
+   "annotation": {
+    "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
+    "zero_padded_model_genes": 0,
+    "label_counts": {
+     "T cell": 84190,
+     "B cell": 9498,
+     "Monocyte": 8018,
+     "NK cell": 4989,
+     "Other": 4507,
+     "DC": 4298
+    },
+    "mean_l2_max_prob": 0.889495140931307,
+    "predict_seconds": 3.6
+   },
+   "n_donors": 77,
+   "n_generated_cells": 115500,
+   "composition": {
+    "l1_mean": 0.6759019523396683,
+    "l1_median": 0.6021328847771236,
+    "l1_obs_loo_null_mean": 0.5124478114694226,
+    "l1_generated_loo_mean_vs_observed_mean": 0.6473562754364626,
+    "composition_top1": 0.07792207792207792,
+    "mean_fraction_generated": {
+     "T cell": 0.728918,
+     "B cell": 0.082234,
+     "Monocyte": 0.06942,
+     "NK cell": 0.043195,
+     "DC": 0.037212,
+     "Other": 0.039022
+    },
+    "mean_fraction_observed": {
+     "T cell": 0.483195,
+     "B cell": 0.172444,
+     "Monocyte": 0.211554,
+     "NK cell": 0.077692,
+     "DC": 0.005624,
+     "Other": 0.049491
+    }
+   },
+   "pseudobulk": {
+    "n_genes": 5975,
+    "r_median": 0.5209609426056898,
+    "r_mean": 0.5254809761685132,
+    "top1": 0.03896103896103896,
+    "n_top1": 3,
+    "own_rank_median": 22.0,
+    "chance_top1": 0.012987012987012988
+   },
+   "precision_coverage": {
+    "precision": 0.7842424242424243,
+    "coverage": 0.061731601731601735,
+    "density": 0.22164502164502164,
+    "n_query": 11550,
+    "n_reference": 11550
+   },
+   "precision_coverage_depth_matched": {
+    "precision": 0.5558441558441558,
+    "coverage": 0.11021645021645021,
+    "density": 0.16377489177489177,
+    "detected_median_before": {
+     "R1": 407.0,
+     "Q": 100.0
+    },
+    "detected_median_after": {
+     "R1": 100.0,
+     "Q": 100.0
+    }
+   },
+   "monocyte_pct": {
+    "generated_mean_over_donors": 6.941991341991343,
+    "observed_mean_over_donors": 21.155399396302027,
+    "generated_pooled_cells": 6.941991341991343
+   },
+   "median_umi_per_cell_scoring_genes": {
+    "generated_pooled": 1982.0,
+    "observed_pooled": 1966.0,
+    "generated_mean_of_donor_medians": 1981.7532958984375,
+    "observed_mean_of_donor_medians": 2122.2662337662337
+   },
+   "contrast": {
+    "mean_cp10k": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.4158879892194963,
+       "r_broadcast": 0.28779071017741836,
+       "partial_r_generated_given_broadcast": 0.3625750003083076,
+       "r_generated_vs_broadcast": 0.29062980997726856,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.3962756168235524,
+       "r_broadcast": 0.30092059959087647,
+       "partial_r_generated_given_broadcast": 0.359064757011007,
+       "r_generated_vs_broadcast": 0.20255033871147266,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.4729544843281267,
+       "r_broadcast": 0.5511838088445075,
+       "partial_r_generated_given_broadcast": 0.3655197582213403,
+       "r_generated_vs_broadcast": 0.33714002888887884,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": 0.36533268090779125,
+       "r_broadcast": 0.20406534279418406,
+       "partial_r_generated_given_broadcast": 0.3270715619566575,
+       "r_generated_vs_broadcast": 0.28743507594628454,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.41261269281974167,
+     "mean_r_broadcast": 0.3359901153517466,
+     "mean_partial_r": 0.3535577693743281
+    },
+    "pseudobulk_log1p_cpm": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.32301858174580556,
+       "r_broadcast": 0.23446571402689154,
+       "partial_r_generated_given_broadcast": 0.32023736616000276,
+       "r_generated_vs_broadcast": 0.05171134901038061,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.279912683795908,
+       "r_broadcast": 0.2824129554276003,
+       "partial_r_generated_given_broadcast": 0.2827051461862464,
+       "r_generated_vs_broadcast": 0.031332812204892146,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.272708424678105,
+       "r_broadcast": 0.6171521141280452,
+       "partial_r_generated_given_broadcast": 0.1774084675982773,
+       "r_generated_vs_broadcast": 0.2213016933714378,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": 0.10716831916286858,
+       "r_broadcast": 0.06147951634862929,
+       "partial_r_generated_given_broadcast": 0.10214498451800547,
+       "r_generated_vs_broadcast": 0.09186207963792078,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.24570200234567183,
+     "mean_r_broadcast": 0.29887757498279155,
+     "mean_partial_r": 0.220623991115633
+    }
+   },
+   "deg_top50": {
+    "types_scored": [
+     "T cell",
+     "B cell",
+     "Monocyte",
+     "NK cell",
+     "DC"
+    ],
+    "types_not_scored": {},
+    "per_type": {
+     "T cell": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 1,
+      "top50_overlap_broadcast": 4,
+      "top50_jaccard_broadcast": 0.041666666666666664,
+      "n_cells_obs": 281037,
+      "n_cells_gen": 84190
+     },
+     "B cell": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 2,
+      "top50_overlap_broadcast": 3,
+      "top50_jaccard_broadcast": 0.030927835051546393,
+      "n_cells_obs": 94421,
+      "n_cells_gen": 9498
+     },
+     "Monocyte": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 18,
+      "top50_overlap_broadcast": 13,
+      "top50_jaccard_broadcast": 0.14942528735632185,
+      "n_cells_obs": 106918,
+      "n_cells_gen": 8018
+     },
+     "NK cell": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 3,
+      "top50_overlap_broadcast": 2,
+      "top50_jaccard_broadcast": 0.02040816326530612,
+      "n_cells_obs": 42712,
+      "n_cells_gen": 4989
+     },
+     "DC": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 28,
+      "top50_overlap_broadcast": 1,
+      "top50_jaccard_broadcast": 0.010101010101010102,
+      "n_cells_obs": 3096,
+      "n_cells_gen": 4298
+     }
+    },
+    "sum": 0,
+    "sum_4type": 0,
+    "max": 250,
+    "mean": 0.0,
+    "sum_broadcast": 23,
+    "sum_broadcast_4type": 22,
+    "broadcast_n_significant": 1101,
+    "seconds": 0.09
+   },
+   "seconds": 15.9
+  },
+  "raw": {
+   "arm": "raw",
+   "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/raw.npz",
+   "npz_sha256": "665afa80f7749e56ee7a1c60d8452bff22a53e7bfcf87254c8e92d4d79c62b2a",
+   "receipt_verified": true,
+   "generation": {
+    "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
+    "checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
+    "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_raw.npz",
+    "input_condition_sha256": "36add186da47d10c067d7a1f0641fabf3ddba64d5e65168c5975e1e3a448c9cd",
+    "seed": 20260928,
+    "steps": 50,
+    "support_readout": "bernoulli",
+    "weights": "ema"
+   },
+   "condition_for_broadcast": {
+    "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_raw.npz",
+    "sha256": "36add186da47d10c067d7a1f0641fabf3ddba64d5e65168c5975e1e3a448c9cd"
+   },
+   "poisson": {
+    "seed": 20260916,
+    "rule": "whole NPZ, rows in NPZ order",
+    "nnz_whole_npz": 41805561,
+    "median_library_whole_npz_panel": 980.0,
+    "n_rows_whole_npz": 123000
+   },
+   "annotation": {
+    "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
+    "zero_padded_model_genes": 0,
+    "label_counts": {
+     "Monocyte": 41911,
+     "T cell": 41041,
+     "B cell": 17900,
+     "NK cell": 10637,
+     "Other": 2928,
+     "DC": 1083
+    },
+    "mean_l2_max_prob": 0.9341774993042151,
+    "predict_seconds": 4.4
+   },
+   "n_donors": 77,
+   "n_generated_cells": 115500,
+   "composition": {
+    "l1_mean": 0.49487224191956,
+    "l1_median": 0.42301181304571145,
+    "l1_obs_loo_null_mean": 0.5124478114694226,
+    "l1_generated_loo_mean_vs_observed_mean": 0.5907210576330578,
+    "composition_top1": 0.06493506493506493,
+    "mean_fraction_generated": {
+     "T cell": 0.355333,
+     "B cell": 0.154978,
+     "Monocyte": 0.362866,
+     "NK cell": 0.092095,
+     "DC": 0.009377,
+     "Other": 0.025351
+    },
+    "mean_fraction_observed": {
+     "T cell": 0.483195,
+     "B cell": 0.172444,
+     "Monocyte": 0.211554,
+     "NK cell": 0.077692,
+     "DC": 0.005624,
+     "Other": 0.049491
+    }
+   },
+   "pseudobulk": {
+    "n_genes": 5975,
+    "r_median": 0.8790362717870047,
+    "r_mean": 0.8709120886051233,
+    "top1": 0.09090909090909091,
+    "n_top1": 7,
+    "own_rank_median": 15.0,
+    "chance_top1": 0.012987012987012988
+   },
+   "precision_coverage": {
+    "precision": 0.6412987012987013,
+    "coverage": 0.0735930735930736,
+    "density": 0.23546320346320346,
+    "n_query": 11550,
+    "n_reference": 11550
+   },
+   "precision_coverage_depth_matched": {
+    "precision": 0.6367099567099567,
+    "coverage": 0.06961038961038961,
+    "density": 0.19643290043290043,
+    "detected_median_before": {
+     "R1": 407.0,
+     "Q": 337.0
+    },
+    "detected_median_after": {
+     "R1": 331.0,
+     "Q": 331.0
+    }
+   },
+   "monocyte_pct": {
+    "generated_mean_over_donors": 36.28658008658008,
+    "observed_mean_over_donors": 21.155399396302027,
+    "generated_pooled_cells": 36.28658008658009
+   },
+   "median_umi_per_cell_scoring_genes": {
+    "generated_pooled": 981.0,
+    "observed_pooled": 1966.0,
+    "generated_mean_of_donor_medians": 1044.3961181640625,
+    "observed_mean_of_donor_medians": 2122.2662337662337
+   },
+   "contrast": {
+    "mean_cp10k": {
+     "per_type": {
+      "T cell": {
+       "r_generated": -0.11504082165733273,
+       "r_broadcast": 0.28779071017741836,
+       "partial_r_generated_given_broadcast": -0.19112437521286169,
+       "r_generated_vs_broadcast": 0.22060551430208009,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.0569641655872456,
+       "r_broadcast": 0.30092059959087647,
+       "partial_r_generated_given_broadcast": -0.006856905244641613,
+       "r_generated_vs_broadcast": 0.21054282077443429,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.04908550882708692,
+       "r_broadcast": 0.5511838088445075,
+       "partial_r_generated_given_broadcast": -0.07038795352896401,
+       "r_generated_vs_broadcast": 0.1935924388731563,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": -0.08144520067083916,
+       "r_broadcast": 0.20406534279418406,
+       "partial_r_generated_given_broadcast": -0.1415235762525954,
+       "r_generated_vs_broadcast": 0.257008260128714,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": -0.02260908697845984,
+     "mean_r_broadcast": 0.3359901153517466,
+     "mean_partial_r": -0.10247320255976566
+    },
+    "pseudobulk_log1p_cpm": {
+     "per_type": {
+      "T cell": {
+       "r_generated": -0.0398152852273337,
+       "r_broadcast": 0.23446571402689154,
+       "partial_r_generated_given_broadcast": -0.10907951006032601,
+       "r_generated_vs_broadcast": 0.26613433335589565,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.08979000717256483,
+       "r_broadcast": 0.2824129554276003,
+       "partial_r_generated_given_broadcast": 0.027302169792930483,
+       "r_generated_vs_broadcast": 0.22763411121354754,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.18645915912802055,
+       "r_broadcast": 0.6171521141280452,
+       "partial_r_generated_given_broadcast": -0.043755300015009456,
+       "r_generated_vs_broadcast": 0.3542959287963732,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": -0.0589455107562435,
+       "r_broadcast": 0.06147951634862929,
+       "partial_r_generated_given_broadcast": -0.07770677109785334,
+       "r_generated_vs_broadcast": 0.25954099213665505,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.04437209257925205,
+     "mean_r_broadcast": 0.29887757498279155,
+     "mean_partial_r": -0.05080985284506458
+    }
+   },
+   "deg_top50": {
+    "types_scored": [
+     "T cell",
+     "B cell",
+     "Monocyte",
+     "NK cell",
+     "DC"
+    ],
+    "types_not_scored": {},
+    "per_type": {
+     "T cell": {
+      "deg_scored": true,
+      "top50_overlap": 3,
+      "top50_jaccard": 0.030927835051546393,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 4,
+      "top50_jaccard_broadcast": 0.041666666666666664,
+      "n_cells_obs": 281037,
+      "n_cells_gen": 41041
+     },
+     "B cell": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 3,
+      "top50_jaccard_broadcast": 0.030927835051546393,
+      "n_cells_obs": 94421,
+      "n_cells_gen": 17900
+     },
+     "Monocyte": {
+      "deg_scored": true,
+      "top50_overlap": 4,
+      "top50_jaccard": 0.041666666666666664,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 13,
+      "top50_jaccard_broadcast": 0.14942528735632185,
+      "n_cells_obs": 106918,
+      "n_cells_gen": 41911
+     },
+     "NK cell": {
+      "deg_scored": true,
+      "top50_overlap": 3,
+      "top50_jaccard": 0.030927835051546393,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 2,
+      "top50_jaccard_broadcast": 0.02040816326530612,
+      "n_cells_obs": 42712,
+      "n_cells_gen": 10637
+     },
+     "DC": {
+      "deg_scored": true,
+      "top50_overlap": 1,
+      "top50_jaccard": 0.015873015873015872,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 14,
+      "top50_overlap_broadcast": 1,
+      "top50_jaccard_broadcast": 0.010101010101010102,
+      "n_cells_obs": 3096,
+      "n_cells_gen": 1083
+     }
+    },
+    "sum": 11,
+    "sum_4type": 10,
+    "max": 250,
+    "mean": 2.2,
+    "sum_broadcast": 23,
+    "sum_broadcast_4type": 22,
+    "broadcast_n_significant": 1101,
+    "seconds": 0.24
+   },
+   "seconds": 19.9
+  },
+  "refcal": {
+   "arm": "refcal",
+   "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/refcal.npz",
+   "npz_sha256": "64784052e0289e347e2799523b4aa4ab07b16ddba6a54353a6011d9e77852891",
+   "receipt_verified": true,
+   "generation": {
+    "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
+    "checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
+    "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_refcal.npz",
+    "input_condition_sha256": "3886924bfe4926914677850db7dac8a77a38bb0c0fc1a30ee663b2587eabc7dd",
+    "seed": 20260928,
+    "steps": 50,
+    "support_readout": "bernoulli",
+    "weights": "ema"
+   },
+   "condition_for_broadcast": {
+    "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_refcal.npz",
+    "sha256": "3886924bfe4926914677850db7dac8a77a38bb0c0fc1a30ee663b2587eabc7dd"
+   },
+   "poisson": {
+    "seed": 20260916,
+    "rule": "whole NPZ, rows in NPZ order",
+    "nnz_whole_npz": 28973583,
+    "median_library_whole_npz_panel": 1551.0,
+    "n_rows_whole_npz": 123000
+   },
+   "annotation": {
+    "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
+    "zero_padded_model_genes": 0,
+    "label_counts": {
+     "T cell": 59020,
+     "Monocyte": 31651,
+     "B cell": 12657,
+     "NK cell": 6348,
+     "Other": 4440,
+     "DC": 1384
+    },
+    "mean_l2_max_prob": 0.9362660371657315,
+    "predict_seconds": 4.1
+   },
+   "n_donors": 77,
+   "n_generated_cells": 115500,
+   "composition": {
+    "l1_mean": 0.4053608819589077,
+    "l1_median": 0.32566666666666655,
+    "l1_obs_loo_null_mean": 0.5124478114694226,
+    "l1_generated_loo_mean_vs_observed_mean": 0.5135225949977247,
+    "composition_top1": 0.07792207792207792,
+    "mean_fraction_generated": {
+     "T cell": 0.510996,
+     "B cell": 0.109584,
+     "Monocyte": 0.274035,
+     "NK cell": 0.054961,
+     "DC": 0.011983,
+     "Other": 0.038442
+    },
+    "mean_fraction_observed": {
+     "T cell": 0.483195,
+     "B cell": 0.172444,
+     "Monocyte": 0.211554,
+     "NK cell": 0.077692,
+     "DC": 0.005624,
+     "Other": 0.049491
+    }
+   },
+   "pseudobulk": {
+    "n_genes": 5975,
+    "r_median": 0.8484697595735529,
+    "r_mean": 0.8432063607926598,
+    "top1": 0.16883116883116883,
+    "n_top1": 13,
+    "own_rank_median": 14.0,
+    "chance_top1": 0.012987012987012988
+   },
+   "precision_coverage": {
+    "precision": 0.8391341991341992,
+    "coverage": 0.19411255411255413,
+    "density": 0.3281385281385282,
+    "n_query": 11550,
+    "n_reference": 11550
+   },
+   "precision_coverage_depth_matched": {
+    "precision": 0.7924675324675324,
+    "coverage": 0.379047619047619,
+    "density": 0.3690995670995671,
+    "detected_median_before": {
+     "R1": 407.0,
+     "Q": 226.0
+    },
+    "detected_median_after": {
+     "R1": 226.0,
+     "Q": 226.0
+    }
+   },
+   "monocyte_pct": {
+    "generated_mean_over_donors": 27.403463203463208,
+    "observed_mean_over_donors": 21.155399396302027,
+    "generated_pooled_cells": 27.4034632034632
+   },
+   "median_umi_per_cell_scoring_genes": {
+    "generated_pooled": 1560.0,
+    "observed_pooled": 1966.0,
+    "generated_mean_of_donor_medians": 1610.642822265625,
+    "observed_mean_of_donor_medians": 2122.2662337662337
+   },
+   "contrast": {
+    "mean_cp10k": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.041627054730190315,
+       "r_broadcast": 0.21280761429515635,
+       "partial_r_generated_given_broadcast": -0.04452432601729167,
+       "r_generated_vs_broadcast": 0.38433794931014287,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.17641820998349864,
+       "r_broadcast": 0.21982178541424685,
+       "partial_r_generated_given_broadcast": 0.12306798857194684,
+       "r_generated_vs_broadcast": 0.2779057172824331,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.3288816518798449,
+       "r_broadcast": 0.4626745968723427,
+       "partial_r_generated_given_broadcast": 0.21165402297217395,
+       "r_generated_vs_broadcast": 0.3276670917993224,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": 0.05417475188747214,
+       "r_broadcast": 0.12346396581756988,
+       "partial_r_generated_given_broadcast": 0.025783946785279722,
+       "r_generated_vs_broadcast": 0.2374785212634759,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.1502754171202515,
+     "mean_r_broadcast": 0.25469199059982894,
+     "mean_partial_r": 0.07899540807802721
+    },
+    "pseudobulk_log1p_cpm": {
+     "per_type": {
+      "T cell": {
+       "r_generated": 0.11926815742106225,
+       "r_broadcast": 0.23449800998386777,
+       "partial_r_generated_given_broadcast": 0.018125951333420244,
+       "r_generated_vs_broadcast": 0.4411770157385417,
+       "n_genes": 3259
+      },
+      "B cell": {
+       "r_generated": 0.19738122473077052,
+       "r_broadcast": 0.28041499838153555,
+       "partial_r_generated_given_broadcast": 0.1346065082174095,
+       "r_generated_vs_broadcast": 0.25882362809093445,
+       "n_genes": 3304
+      },
+      "Monocyte": {
+       "r_generated": 0.25570884194277277,
+       "r_broadcast": 0.6184352069605292,
+       "partial_r_generated_given_broadcast": 0.05065958697264845,
+       "r_generated_vs_broadcast": 0.353255117505288,
+       "n_genes": 3285
+      },
+      "NK cell": {
+       "r_generated": 0.05493309334938061,
+       "r_broadcast": 0.06217789931454939,
+       "partial_r_generated_given_broadcast": 0.04649587385374084,
+       "r_generated_vs_broadcast": 0.14503292779735003,
+       "n_genes": 3226
+      }
+     },
+     "mean_r_generated": 0.15682282936099654,
+     "mean_r_broadcast": 0.29888152866012047,
+     "mean_partial_r": 0.062471980094304755
+    }
+   },
+   "deg_top50": {
+    "types_scored": [
+     "T cell",
+     "B cell",
+     "Monocyte",
+     "NK cell",
+     "DC"
+    ],
+    "types_not_scored": {},
+    "per_type": {
+     "T cell": {
+      "deg_scored": true,
+      "top50_overlap": 3,
+      "top50_jaccard": 0.030927835051546393,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 0,
+      "top50_jaccard_broadcast": 0.0,
+      "n_cells_obs": 281037,
+      "n_cells_gen": 59020
+     },
+     "B cell": {
+      "deg_scored": true,
+      "top50_overlap": 2,
+      "top50_jaccard": 0.02040816326530612,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 0,
+      "top50_jaccard_broadcast": 0.0,
+      "n_cells_obs": 94421,
+      "n_cells_gen": 12657
+     },
+     "Monocyte": {
+      "deg_scored": true,
+      "top50_overlap": 5,
+      "top50_jaccard": 0.05263157894736842,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 9,
+      "top50_jaccard_broadcast": 0.0989010989010989,
+      "n_cells_obs": 106918,
+      "n_cells_gen": 31651
+     },
+     "NK cell": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 50,
+      "top50_overlap_broadcast": 2,
+      "top50_jaccard_broadcast": 0.02040816326530612,
+      "n_cells_obs": 42712,
+      "n_cells_gen": 6348
+     },
+     "DC": {
+      "deg_scored": true,
+      "top50_overlap": 0,
+      "top50_jaccard": 0.0,
+      "obs_top_list_size": 50,
+      "gen_top_list_size": 7,
+      "top50_overlap_broadcast": 1,
+      "top50_jaccard_broadcast": 0.010101010101010102,
+      "n_cells_obs": 3096,
+      "n_cells_gen": 1384
+     }
+    },
+    "sum": 10,
+    "sum_4type": 10,
+    "max": 250,
+    "mean": 2.0,
+    "sum_broadcast": 12,
+    "sum_broadcast_4type": 11,
+    "broadcast_n_significant": 746,
+    "seconds": 0.18
+   },
+   "seconds": 18.1
+  }
+ },
+ "code_sha256": {
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py": "48b12d794782b840838853e93e0fc55fab00532c4b3698f4588e926b985d2881",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/immicro/tools/immicro_common.py": "c5c30e917148cc5e664e91ea30c11bbdff9b6d1f53a3e0a13e16b1917eff37e9",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/predict_scanvi.py": "482ee5dcf4d72b54bc36cbb6dcff62e5030bc7afc46cb5fb01eca73a82ee45a5",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/poisson_readout.py": "8bfa080942fbcdc89ae23b276524a1a83266fb8cbc56b9af279e50f82e6cde38"
+ },
+ "seconds": 100.5
+}