Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_nosex/giroux2022/loco_lora16_K1000/contrast.csv

@@ -0,0 +1,14 @@
+arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
+loco_lora16_K1000,T cell,mean_cp10k,2886,0.5080060450693017,0.5864764503055301,0.3196760042562225,0.4785374470127855,11,13,11,13,145034,23523,,,,,,,,,,,
+loco_lora16_K1000,T cell,pseudobulk_log1p_cpm,2886,0.35884618757335474,0.6077451868574512,0.18745251584598227,0.36213907188071665,11,13,11,13,145034,23523,,,,,,,,,,,
+loco_lora16_K1000,B cell,mean_cp10k,3030,0.22240704370108988,0.48025603753384744,0.15902711521394694,0.17725687736109852,11,13,11,13,17383,3402,,,,,,,,,,,
+loco_lora16_K1000,B cell,pseudobulk_log1p_cpm,3030,0.08168876246326108,0.4644022343428308,0.038330052766769526,0.10319495041069372,11,13,11,13,17383,3402,,,,,,,,,,,
+loco_lora16_K1000,Monocyte,mean_cp10k,3034,0.17201493266527973,0.6794468550874515,0.07900475387026469,0.16908137048126187,11,13,11,13,47311,3736,,,,,,,,,,,
+loco_lora16_K1000,Monocyte,pseudobulk_log1p_cpm,3034,0.009095848925265684,0.6731923266540611,-0.01136389925557077,0.02598996321970393,11,13,11,13,47311,3736,,,,,,,,,,,
+loco_lora16_K1000,NK cell,mean_cp10k,2931,0.2816688403689639,0.554884628817489,0.19541909160261595,0.22193579334265834,11,13,11,13,29061,3703,,,,,,,,,,,
+loco_lora16_K1000,NK cell,pseudobulk_log1p_cpm,2931,0.07181250903974912,0.5368131432639086,0.03409824342480078,0.08035722739860314,11,13,11,13,29061,3703,,,,,,,,,,,
+loco_lora16_K1000,T cell,welch_top50_deg,5498,,,,,11,13,11,13,145034,23523,True,0,0.0,50,3,274,3,3,0.05454545454545454,8,8
+loco_lora16_K1000,B cell,welch_top50_deg,5498,,,,,11,13,11,13,17383,3402,True,0,,0,0,0,0,0,0.0,8,8
+loco_lora16_K1000,Monocyte,welch_top50_deg,5498,,,,,11,13,11,13,47311,3736,True,0,0.0,1,0,1,0,1,0.125,8,8
+loco_lora16_K1000,NK cell,welch_top50_deg,5498,,,,,11,13,11,13,29061,3703,True,0,0.0,50,0,62,0,1,0.017543859649122806,8,8
+loco_lora16_K1000,DC,welch_top50_deg,5498,,,,,11,13,11,13,4328,705,True,0,,0,0,0,0,0,0.0,8,8

paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_nosex/giroux2022/loco_lora16_K1000/per_donor.csv

@@ -0,0 +1,25 @@
+arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
+loco_lora16_K1000,450905_d0,mild,1500,5914,150,0.802,0.30943523841731485,0.062,0.036185322962461956,0.037333333333333336,0.4293202570172472,0.056,0.12089956036523504,0.03666666666666667,0.009976327358809604,0.006,0.09418329387893135,1.0901395558561606,0.6266504923198378,0.8599026471871319,17,False,0.9866666666666667,0.6066666666666667,0.9866666666666667,0.6866666666666666,3.733333333333334,42.93202570172472,575.0,574.5
+loco_lora16_K1000,450905_d14,mild,1500,7407,150,0.4653333333333333,0.4422843256379101,0.07666666666666666,0.02929661131362225,0.23466666666666666,0.27420008100445525,0.174,0.15782368030241664,0.03266666666666666,0.02983664101525584,0.016666666666666666,0.06655866072633995,0.17885081679492368,0.36155260046011806,0.8653670304956907,2,False,1.0,0.8466666666666667,0.94,0.9,23.466666666666665,27.420008100445525,546.0,558.0
+loco_lora16_K1000,0B943B_d0,mild,1500,11344,150,0.66,0.6220028208744711,0.11666666666666667,0.08312764456981664,0.09733333333333333,0.12588152327221439,0.09,0.11865303244005641,0.024,0.023977433004231313,0.012,0.026357545839210156,0.14311753643629524,0.1791278384873501,0.8583826443190368,16,False,0.9933333333333333,0.92,0.9533333333333334,0.9466666666666667,9.733333333333333,12.588152327221438,491.5,539.0
+loco_lora16_K1000,0B943B_d14,mild,1500,15650,150,0.5813333333333334,0.5652396166134185,0.114,0.11175718849840256,0.2,0.17086261980830672,0.06933333333333333,0.09789137380191694,0.012666666666666666,0.009968051118210863,0.02266666666666667,0.04428115015974441,0.10034504792332277,0.10063602424453227,0.8845325279866558,1,True,0.9866666666666667,0.8266666666666667,0.94,0.9,20.0,17.08626198083067,629.0,461.0
+loco_lora16_K1000,7085CA_d0,mild,1500,12585,150,0.5426666666666666,0.21660707191100517,0.09066666666666667,0.024791418355184745,0.222,0.5874453714739769,0.098,0.13198251887167262,0.04066666666666666,0.017719507350019866,0.006,0.021454112038140644,0.8297640047675804,0.8829287440863147,0.8912543538534053,1,True,1.0,0.7533333333333333,0.9533333333333334,0.8666666666666667,22.2,58.74453714739769,651.0,640.0
+loco_lora16_K1000,7085CA_d7,mild,1500,9515,150,0.3313333333333333,0.521492380451918,0.08733333333333333,0.0722017866526537,0.2633333333333333,0.10110352075669994,0.25666666666666665,0.2725170782974251,0.037333333333333336,0.019863373620599055,0.024,0.012821860220704152,0.4120189174986863,0.3632282731474772,0.8241601297419522,14,False,0.9933333333333333,0.8333333333333334,0.9666666666666667,0.8133333333333334,26.333333333333332,10.110352075669994,366.0,502.0
+loco_lora16_K1000,7085CA_d14,mild,1500,11887,150,0.4066666666666667,0.472533019264743,0.06466666666666666,0.07133843694792631,0.22466666666666665,0.16210986792294102,0.258,0.24270211155043325,0.025333333333333333,0.018591738874400604,0.020666666666666667,0.032724825439555814,0.16919256330445023,0.2993283707516418,0.840972042255829,5,False,1.0,0.8,0.9733333333333334,0.8866666666666667,22.466666666666665,16.2109867922941,373.0,536.0
+loco_lora16_K1000,2AD75E_d0,mild,1500,7693,150,0.6526666666666666,0.6034056934875861,0.12666666666666668,0.06408423241908229,0.038,0.14064734173924348,0.14533333333333334,0.15949564539191471,0.020666666666666667,0.025347718705316522,0.016666666666666666,0.007019368256856883,0.2429814116729494,0.20681142084856263,0.8503954442101114,15,False,0.9866666666666667,0.7,0.9733333333333334,0.76,3.8,14.064734173924348,445.0,532.0
+loco_lora16_K1000,2AD75E_d7,mild,1500,10499,150,0.5933333333333334,0.5808172206876845,0.20266666666666666,0.14372797409277074,0.06866666666666667,0.10277169254214687,0.07466666666666667,0.14715687208305553,0.012,0.013715591961139155,0.048666666666666664,0.011810648633203162,0.21662164650601654,0.27874882058987843,0.8401544400549498,7,False,1.0,0.7733333333333333,0.98,0.78,6.866666666666667,10.277169254214687,374.0,443.0
+loco_lora16_K1000,2AD75E_d14,mild,1500,13692,150,0.6133333333333333,0.5811422728600643,0.13266666666666665,0.12503651767455448,0.09866666666666667,0.14198071866783524,0.12266666666666666,0.12496348232544552,0.018,0.016579024247735902,0.014666666666666666,0.010297984224364592,0.0912217353198948,0.19762923258298543,0.851458870108241,13,False,0.9866666666666667,0.8533333333333334,0.96,0.7733333333333333,9.866666666666667,14.198071866783524,479.0,428.0
+loco_lora16_K1000,B85D75_d0,severe,1500,11441,150,0.792,0.7173324010138974,0.11933333333333333,0.031203566121842496,0.006666666666666667,0.11441307578008915,0.036,0.06039681845992483,0.0013333333333333333,0.016519535005681322,0.04466666666666667,0.06013460361856481,0.32559473239518694,0.35882358586377083,0.8256870370043362,4,False,1.0,0.9333333333333333,0.9933333333333333,0.9066666666666666,0.6666666666666667,11.441307578008916,329.5,347.0
+loco_lora16_K1000,B85D75_d7,severe,1500,12328,150,0.8586666666666667,0.6435756002595717,0.072,0.06448734587929916,0.025333333333333333,0.13741077222582737,0.02266666666666667,0.04201817001946788,0.004,0.027741726151849447,0.017333333333333333,0.08476638546398442,0.4452074410555916,0.28301793033829503,0.848484424077714,2,False,0.9866666666666667,0.8466666666666667,0.9666666666666667,0.8333333333333334,2.533333333333333,13.741077222582737,507.0,363.0
+loco_lora16_K1000,180E1A_d0,severe,1500,7157,150,0.5953333333333334,0.7019700992035769,0.114,0.04135811094033813,0.116,0.13175911694844208,0.092,0.0655302501047925,0.035333333333333335,0.013273718038284197,0.04733333333333333,0.04610870476456616,0.2447917656373713,0.31372800769589615,0.8305800830338502,14,False,1.0,0.8733333333333333,0.9733333333333334,0.8466666666666667,11.600000000000001,13.175911694844208,347.0,433.0
+loco_lora16_K1000,180E1A_d7,severe,1500,10591,150,0.69,0.7348692285903126,0.09533333333333334,0.04909829100179398,0.04533333333333334,0.09064299877254273,0.09466666666666666,0.08280615617033331,0.004,0.010480596733075253,0.07066666666666667,0.03210272873194221,0.19331898152519442,0.37628768415060193,0.836026774174321,7,False,0.9866666666666667,0.8933333333333333,0.9733333333333334,0.8533333333333334,4.533333333333333,9.064299877254273,371.0,408.0
+loco_lora16_K1000,180E1A_d14,severe,1500,12511,150,0.6793333333333333,0.680840860043162,0.076,0.05147470226200943,0.08466666666666667,0.12277196067460634,0.09333333333333334,0.0800095915594277,0.012,0.009831348413396212,0.05466666666666667,0.05507153704739829,0.08003538219699996,0.28939519394073066,0.8465864870877264,3,False,0.9933333333333333,0.9,0.9266666666666666,0.8933333333333333,8.466666666666667,12.277196067460634,436.0,342.0
+loco_lora16_K1000,82CCF5_d0,severe,1500,10125,150,0.596,0.5422222222222223,0.12133333333333333,0.11832098765432099,0.19466666666666665,0.1539753086419753,0.06066666666666667,0.09303703703703704,0.014,0.016691358024691356,0.013333333333333334,0.07575308641975309,0.1949629629629629,0.18419072822032903,0.8814726556518365,8,False,0.9866666666666667,0.7666666666666667,0.96,0.8666666666666667,19.466666666666665,15.397530864197531,629.0,390.0
+loco_lora16_K1000,82CCF5_d7,severe,1500,10860,150,0.5446666666666666,0.619060773480663,0.12733333333333333,0.09972375690607735,0.148,0.14152854511970533,0.10066666666666667,0.09410681399631676,0.03,0.013627992633517496,0.04933333333333333,0.03195211786372008,0.14878821362799266,0.19419086678828923,0.8549398900256606,2,False,0.9733333333333334,0.8133333333333334,0.94,0.78,14.799999999999999,14.152854511970533,448.0,497.0
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+loco_lora16_K1000,BAAF62_d0,mild,1500,14741,150,0.448,0.5279153381724442,0.07533333333333334,0.0384641476154942,0.13066666666666665,0.1854690997897022,0.30266666666666664,0.1717658232141646,0.020666666666666667,0.023132758971575875,0.02266666666666667,0.053252832236618954,0.3355400583406824,0.14602913946264867,0.8469489249945682,5,False,0.98,0.8533333333333334,0.96,0.9,13.066666666666665,18.54690997897022,415.5,449.0
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paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_nosex/giroux2022/zs_K1000/per_donor.csv

@@ -0,0 +1,25 @@
+arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
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paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_nosex/giroux2022/zs_K1000/summary.json

@@ -0,0 +1,809 @@
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