Archive 4 checkpoints (1-4)
Browse files- paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/STREAM_VERIFICATION.json +50 -0
- paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/VERIFICATION.json +29 -0
- paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/marker_readiness.csv +25 -0
- paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/panel_metadata_bindings.json +58 -0
paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/STREAM_VERIFICATION.json
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paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/VERIFICATION.json
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{
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"pdf_bounds": [
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/presentations/2026-09-30--paper-summary--r00/figures/strengthening_20261013/rare_literature/published_population_targets.pdf",
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"visual_review": "All three final PNG assets inspected: readable, no overlapping labels or clipping.",
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"numeric_checks_pass": true,
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"no_new_inference": true
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paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/marker_readiness.csv
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cohort,gene,role,in_legacy_marker_cache,in_model_6k_axis,measured_in_all_source_samples
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ye2026_sepsis,CD14,marker/program,False,True,True
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ye2026_sepsis,MKI67,marker/program,True,True,True
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ye2026_sepsis,STMN1,marker/program,False,True,True
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ye2026_sepsis,MPO,marker/program,True,True,True
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ye2026_sepsis,ELANE,marker/program,True,True,True
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imperial_eskd,CD163,marker/program,True,True,True
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imperial_eskd,ADAMTS2,marker/program,False,True,True
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imperial_eskd,SLC1A3,marker/program,False,True,True
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imperial_eskd,SESN1,marker/program,False,True,True
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imperial_eskd,FPR1,marker/program,False,True,True
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imperial_eskd,MTSS1,marker/program,False,True,True
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imperial_eskd,MFGE8,marker/program,False,True,True
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imperial_eskd,MRC1,marker/program,False,True,True
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imperial_eskd,JUN,lower in target,False,True,True
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imperial_eskd,CXCL8,lower in target,False,True,True
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imperial_eskd,HLA-DRA,lower in target,True,True,True
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imperial_eskd,HLA-DRB5,lower in target,False,True,True
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giroux2022,CD14,marker/program,False,True,True
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giroux2022,IRF7,marker/program,False,True,True
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giroux2022,IRF1,marker/program,False,False,False
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giroux2022,STAT1,marker/program,False,True,True
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giroux2022,CEBPB,marker/program,False,True,True
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giroux2022,KLF3,marker/program,False,False,False
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giroux2022,CCR2,marker/program,False,True,True
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paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/rare_literature/panel_metadata_bindings.json
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[
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/cells_panel6k.npz",
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