Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw3/cat.csv

@@ -0,0 +1,301 @@
+dataset,design,unit,arm,predictor,celltype,k,k_eff,cat_same_sign,cat_any_sign,chance_same_sign,chance_any_sign,G_both,pred_defined,n_tested_obs,n_tested_pred
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,Monocyte,200,200,0.26,0.26,0.017768301350390904,0.03553660270078181,5628,True,5628,5846
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,Monocyte,500,500,0.3,0.304,0.04442075337597726,0.08884150675195451,5628,True,5628,5846
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,NK cell,10,10,0.1,0.1,0.0012062726176115801,0.0024125452352231603,4145,True,5579,4149
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,NK cell,20,20,0.15,0.15,0.0024125452352231603,0.0048250904704463205,4145,True,5579,4149
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,NK cell,50,50,0.24,0.24,0.006031363088057901,0.012062726176115802,4145,True,5579,4149
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,NK cell,100,100,0.37,0.37,0.012062726176115802,0.024125452352231604,4145,True,5579,4149
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,NK cell,200,200,0.4,0.4,0.024125452352231604,0.04825090470446321,4145,True,5579,4149
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,NK cell,500,500,0.34,0.358,0.06031363088057901,0.12062726176115803,4145,True,5579,4149
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,NK cell,10,10,0.2,0.2,0.0008962179602079225,0.001792435920415845,5579,True,5579,5846
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,NK cell,20,20,0.4,0.4,0.001792435920415845,0.00358487184083169,5579,True,5579,5846
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,NK cell,50,50,0.4,0.4,0.004481089801039613,0.008962179602079226,5579,True,5579,5846
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,NK cell,100,100,0.4,0.4,0.008962179602079226,0.01792435920415845,5579,True,5579,5846
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,NK cell,200,200,0.435,0.435,0.01792435920415845,0.0358487184083169,5579,True,5579,5846
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,DC,20,20,0.15,0.15,0.0027593818984547464,0.005518763796909493,3624,True,5426,3629
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,DC,50,50,0.1,0.1,0.006898454746136865,0.01379690949227373,3624,True,5426,3629
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,DC,200,200,0.11,0.11,0.02759381898454746,0.05518763796909492,3624,True,5426,3629
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,generated:zs_pseudo,DC,500,500,0.138,0.146,0.06898454746136866,0.13796909492273732,3624,True,5426,3629
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,broadcast:all_usable_pseudo.npz@df955ec1,DC,100,100,0.3,0.3,0.009214891264283081,0.018429782528566162,5426,True,5426,5846
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,broadcast:test_cal.npz@40362513,B cell,100,100,0.23,0.23,0.009026900162484202,0.018053800324968405,5539,True,5636,5823
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,generated:zs_cal,Monocyte,10,10,0.0,0.0,0.0011483693155718878,0.0022967386311437757,4354,True,5628,4364
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,generated:zs_cal,Monocyte,20,20,0.0,0.0,0.0022967386311437757,0.004593477262287551,4354,True,5628,4364
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,generated:zs_cal,Monocyte,50,50,0.16,0.16,0.005741846577859439,0.011483693155718878,4354,True,5628,4364
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,generated:zs_cal,Monocyte,100,100,0.21,0.21,0.011483693155718878,0.022967386311437757,4354,True,5628,4364
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,broadcast:test_cal.npz@40362513,Monocyte,200,200,0.195,0.195,0.018073377914332188,0.036146755828664376,5533,True,5628,5823
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+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,generated:zs_cal,NK cell,10,10,0.0,0.0,0.0012218963831867058,0.0024437927663734115,4092,True,5579,4101
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+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,generated:lora5,T cell,500,500,0.304,0.306,0.05419466724474312,0.10838933448948623,4613,True,5747,4615
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,broadcast:test_raw.npz@1bb5ea46,T cell,10,10,0.0,0.0,0.0008851124092759781,0.0017702248185519562,5649,True,5747,5823
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+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,NK cell,200,200,0.285,0.285,0.018238190771475468,0.036476381542950936,5483,True,5579,5823
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,NK cell,500,500,0.318,0.322,0.04559547692868868,0.09119095385737735,5483,True,5579,5823
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,generated:scsemi5,DC,10,10,0.0,0.0,0.004708097928436911,0.009416195856873822,1062,True,5426,1063
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,generated:scsemi5,DC,20,20,0.05,0.05,0.009416195856873822,0.018832391713747645,1062,True,5426,1063
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,generated:scsemi5,DC,50,50,0.12,0.12,0.023540489642184557,0.047080979284369114,1062,True,5426,1063
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,generated:scsemi5,DC,100,100,0.17,0.18,0.047080979284369114,0.09416195856873823,1062,True,5426,1063
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,generated:scsemi5,DC,200,200,0.205,0.21,0.09416195856873823,0.18832391713747645,1062,True,5426,1063
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,generated:scsemi5,DC,500,500,0.172,0.222,0.23540489642184556,0.4708097928436911,1062,True,5426,1063
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,DC,10,10,0.1,0.1,0.0009375585974123383,0.0018751171948246765,5333,True,5426,5823
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,DC,20,20,0.05,0.05,0.0018751171948246765,0.003750234389649353,5333,True,5426,5823
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,DC,50,50,0.1,0.1,0.004687792987061692,0.009375585974123383,5333,True,5426,5823
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,DC,100,100,0.16,0.16,0.009375585974123383,0.018751171948246766,5333,True,5426,5823
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,DC,200,200,0.205,0.205,0.018751171948246766,0.03750234389649353,5333,True,5426,5823
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,broadcast:test_raw.npz@1bb5ea46,DC,500,500,0.264,0.272,0.04687792987061691,0.09375585974123382,5333,True,5426,5823

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw3/ceiling.csv

@@ -0,0 +1,51 @@
+dataset,design,unit,predictor,arm,celltype,n_genes,pearson_mean,pearson_sd,spearman_mean,spearman_sd,pearson_s20260926,spearman_s20260926,pearson_s20260927,spearman_s20260927,pearson_s20260928,spearman_s20260928,pearson_s20260929,spearman_s20260929,pearson_s20260930,spearman_s20260930,sb_reliability_pearson,noise_free_ceiling_pearson,sb_reliability_spearman,noise_free_ceiling_spearman,min_n_case_donors_A,min_n_control_donors_A,min_n_case_donors_B,min_n_control_donors_B,mean_n_cells_A,mean_n_cells_B,condition_sha256
+imperial_eskd,fewshot,fewshot_n5/draw3,split_half_A_vs_B,,T cell,3031.0,0.9634272602007078,0.0013796646098980091,0.8581090257728403,0.0023163606849593405,0.9640168647507074,0.8577063194245856,0.9639473060325212,0.8584604936877998,0.9628696664170594,0.855254727421993,0.9649585119683695,0.8616604025270744,0.9613439518348812,0.8574631858027496,0.9813730100724212,0.9906427257454734,0.9236368952203204,0.9610602973905021,104.0,31.0,104.0,31.0,120658.0,120728.0,
+imperial_eskd,fewshot,fewshot_n5/draw3,split_half_A_vs_B,,B cell,3186.0,0.7770505763362482,0.010753237051866475,0.5215629283906356,0.017021006103046687,0.7794359438402666,0.5286196833290011,0.7915336771081075,0.5457151802097332,0.7810341461253497,0.5173453608898451,0.7692518818251254,0.5165428433889669,0.7639972327823913,0.49959157413563215,0.8745396295228651,0.9351682359462735,0.6855620870604349,0.8279867674428347,104.0,31.0,104.0,31.0,23157.0,23217.0,
+imperial_eskd,fewshot,fewshot_n5/draw3,split_half_A_vs_B,,Monocyte,2879.0,0.8850809307760301,0.000868993020337051,0.6865904050224952,0.0027417979320273236,0.8840819694128592,0.6888676357306264,0.8860342247058367,0.6839632708695551,0.8858733401688021,0.6894217770797665,0.8843857073975934,0.6872052971712197,0.8850294121950584,0.6834940442613083,0.9390375939049677,0.9690395213328338,0.8141756326585264,0.9023168139065826,103.0,30.0,103.0,31.0,37416.0,37484.0,
+imperial_eskd,fewshot,fewshot_n5/draw3,split_half_A_vs_B,,NK cell,2964.0,0.9162184087468568,0.0017661473397343782,0.7051953842643656,0.0018056140468923295,0.9155424598544225,0.7072461356472668,0.9181292917194196,0.7034799973869659,0.9160254394068563,0.7068459735001652,0.9176708298627247,0.7049758361283383,0.9137240228908613,0.7034289786590918,0.9562776399231372,0.9778944932471688,0.8271138788809147,0.909458013808727,104.0,31.0,104.0,31.0,33874.0,33944.0,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_raw,zs_raw,T cell,3031.0,0.609250692429772,0.0029586046208868715,0.4287071778788823,0.0027503329453648123,0.6067127092975154,0.4301180822195999,0.6085849433244475,0.42783692917639576,0.6062951060275061,0.4245215425865463,0.6118695421766455,0.42923605643535656,0.6127911613227458,0.4318232789765128,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_raw,zs_raw,B cell,3186.0,0.5781670724247391,0.013901491497718823,0.40712082317235926,0.008733041298451533,0.5928635935700287,0.41677380666078895,0.5559426164161899,0.39417894430444506,0.5852998115943682,0.4030433391328623,0.5808281664573257,0.4113670730285622,0.5759011740857831,0.41024095273513767,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_raw,zs_raw,Monocyte,2879.0,0.6868640560591353,0.004224083792220245,0.4763403549969212,0.0040220187975611235,0.6845803534658349,0.47022253304322925,0.6933154861003572,0.47831870904973295,0.68876692560779,0.4798828349563182,0.6849441727204951,0.4743326021191533,0.6827133424011991,0.4789450958161724,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_raw,zs_raw,NK cell,2964.0,0.6017526035697297,0.002267033613681951,0.4097239114689488,0.0008881591185406715,0.6050970479208567,0.40874324118562155,0.6022704789794273,0.4092488712542519,0.600269381468004,0.4094559015091479,0.6019903357261264,0.41013272996562683,0.5991357737542339,0.411038813430096,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_pseudo,zs_pseudo,T cell,3031.0,0.6607698161431027,0.005535164213783246,0.1944291779687088,0.006317503207984978,0.653250368535489,0.18622470320684364,0.6651145704863058,0.19707842234818868,0.6587119707512964,0.1991828627110323,0.6595645196392006,0.18924458021484913,0.6672076513032213,0.20041532136263013,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_pseudo,zs_pseudo,B cell,3186.0,0.5320770280190388,0.012090807822776061,0.18365649693108868,0.011185792099733227,0.5427143856877802,0.19046626664812122,0.5216058675350995,0.17496258239338947,0.5442717946686296,0.20011158289444736,0.5341682722844633,0.17547530066161726,0.5176248199192215,0.17726675205786807,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_pseudo,zs_pseudo,Monocyte,2879.0,0.6991050346086396,0.0036355704518563174,0.49359888193345,0.005355470099392494,0.6946657870042607,0.4862096675598454,0.7029763461733752,0.4922985643927499,0.7001132473622595,0.4920757791095939,0.7018056926129548,0.5001130573949224,0.6959640998903479,0.4972973412101385,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_pseudo,zs_pseudo,NK cell,2964.0,0.6987953025623395,0.0057180661826983165,0.33967824910623734,0.007889003763386065,0.7048992572251971,0.3494350714728211,0.7025424271302613,0.33113434285811416,0.6934556896515793,0.34301589162012774,0.6920230559123667,0.3319597191362094,0.7010560828922928,0.3428462204439143,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_cal,zs_cal,T cell,3031.0,0.6579620304933163,0.005208748908153019,0.21601145650918116,0.007933708138448415,0.6498521700279914,0.20401489915215476,0.6610721389628722,0.2129217044363085,0.657040073536521,0.21955834840188487,0.6582119509789158,0.21868670067427373,0.663633818960281,0.22487562988128396,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_cal,zs_cal,B cell,3186.0,0.5621480529202827,0.021399817553111596,0.26504197756713976,0.01593159660474131,0.5797535044117461,0.27451208587818293,0.5356497031507143,0.24252537420151576,0.5850507805063474,0.2846444634032382,0.5650684018143558,0.2592307288887102,0.5452178747182498,0.26429723546405187,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_cal,zs_cal,Monocyte,2879.0,0.6830370164140247,0.0032037801585271825,0.4508182569690029,0.005190802961831976,0.6790629199112268,0.44951327751549386,0.6855002826612541,0.445573277287794,0.682552175166771,0.4473868768295943,0.6869476928914086,0.4587224315236989,0.6811220114394625,0.4528954216884337,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_cal,zs_cal,NK cell,2964.0,0.6766522870992914,0.004737871658715062,0.3177993155552032,0.005922370531884797,0.6770944711456512,0.32247576499110553,0.6828563888743071,0.3217325452219927,0.6717025019428542,0.3123569804843615,0.6722569340403524,0.31037084367965406,0.679351139493292,0.3220604433989023,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:lora5,lora5,T cell,3031.0,0.8170069806124001,0.0023209500164800313,0.629837161818622,0.0021954412030215495,0.8156127659641329,0.6320037671802582,0.8171509842020714,0.6267455943399953,0.8143292384930562,0.6304047875618874,0.8174383200207291,0.6284923739986836,0.8205035943820103,0.6315392860122853,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:lora5,lora5,B cell,3186.0,0.608061525021238,0.017499766094651478,0.42410758958422556,0.009002354037078652,0.62195717292457,0.4247028434410043,0.5789775008131385,0.4122113833767309,0.621234342516795,0.4249799869374573,0.6113544082803118,0.4213482541396189,0.6067842005713745,0.43729548002631646,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:lora5,lora5,Monocyte,2879.0,0.7378817173631844,0.0028409315094977093,0.5178378552670633,0.0018040091893994387,0.734129667955687,0.5198153501150528,0.7414441908016978,0.5149393350907255,0.7398042903636466,0.5186754821101548,0.7374130563221453,0.5178596151848597,0.7366173813727456,0.517899493834524,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:lora5,lora5,NK cell,2964.0,0.7794124609789456,0.004357475412672061,0.516727435039689,0.005474646916536694,0.7837738637520164,0.5238830391619648,0.7838386985316631,0.5090418838990503,0.7737036054156543,0.5172732652425708,0.7778162125658515,0.5145609508830215,0.7779299246295421,0.5188780360118375,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:scsemi5,scsemi5,T cell,3031.0,0.6006779569549228,0.012459629987942896,0.5341311004379178,0.0030137572798170243,0.5907906424709692,0.5385979377865425,0.6017457965732255,0.5308901799185375,0.6146172203390672,0.5345081503397243,0.6106612095827448,0.5348208937495567,0.5855749158086071,0.5318383403952275,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:scsemi5,scsemi5,B cell,3186.0,0.4781597714576325,0.019679578098472445,0.22838343557158072,0.006983846535711274,0.4792744418925649,0.23219035338039962,0.4844487433247755,0.22555207118074408,0.4661427693443316,0.22819810692791478,0.5064789448523965,0.21870822006221727,0.4544539578740938,0.23726842630662795,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:scsemi5,scsemi5,Monocyte,2879.0,0.5932478330559103,0.011819392950890241,0.28842307887583674,0.007156401645062482,0.6079815156152862,0.2885008716070936,0.6035627525687715,0.3006057908381444,0.5869284211970396,0.28623488746896725,0.58072198951493,0.2840643757181469,0.5870444863835245,0.2827094687468318,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:scsemi5,scsemi5,NK cell,2964.0,0.6557074552579711,0.00548120779973812,0.39168521003742296,0.006110980478849167,0.6565605310379187,0.396023442373958,0.6571707742410591,0.38600791720956124,0.6630982045390463,0.3884950438450172,0.6536438668703449,0.4001904286576644,0.6480638996014862,0.3877092181009141,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_raw.npz@f0a2b659,,T cell,3031.0,0.6291108490397765,0.003217518055170592,0.217988640126679,0.006025109750119285,0.6243584276044,0.21361347688466795,0.6281351224418599,0.21031943598332672,0.6329292155208367,0.2249335808924686,0.630922647767711,0.2188041726136076,0.6292088318640753,0.22227253425932414,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_raw.npz@f0a2b659,,B cell,3186.0,0.5909420483211915,0.008819933318460333,0.2663691769132114,0.010402988534961534,0.5981836064264345,0.2796203177164004,0.5832027126632284,0.2546614365960385,0.6005847315547753,0.2734065475351382,0.5920278383551391,0.25796264241635314,0.5807113526063802,0.2661949403021267,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_raw.npz@f0a2b659,,Monocyte,2879.0,0.6975405347583361,0.004487448008208098,0.4937373063300162,0.003269150500271371,0.6973901385551545,0.496203567525383,0.7053132591674923,0.49375108223397035,0.6945653602435833,0.48837914574470936,0.6956971727806257,0.49379523381882384,0.6947367430448246,0.4965575023271946,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_raw.npz@f0a2b659,,NK cell,2964.0,0.6454988616329091,0.004007039698206298,0.3239608336784621,0.009654864176362637,0.6459591048118083,0.324146476968049,0.6447666091078287,0.30903643333692116,0.6463116982568989,0.33196201810414566,0.6396306582257892,0.32170036491612114,0.650826237762221,0.3329588750670736,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_pseudo.npz@df955ec1,,T cell,3031.0,0.7974901315926821,0.003202799827393015,0.6908058403679409,0.00427404558565791,0.7946387507345878,0.6926101108921338,0.7962521649362154,0.6859857484744338,0.8019198735195903,0.696908174729102,0.7997373943117173,0.6877494052958117,0.7949024744613002,0.6907757624482229,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_pseudo.npz@df955ec1,,B cell,3186.0,0.7445050313568962,0.0059165993101137765,0.6096281775672703,0.017213327860981894,0.7501851029855126,0.6160441150987643,0.7355367553719312,0.6017565298364793,0.7489575471903127,0.6084923519864651,0.7457706707750831,0.587713824785585,0.7420750804616414,0.6341340661290579,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_pseudo.npz@df955ec1,,Monocyte,2879.0,0.7212985436115942,0.003615693814020613,0.5068753716717103,0.004829233978138081,0.7239169303920174,0.5040044607041976,0.7245040625178621,0.5109761112898649,0.723319113199814,0.512195300605223,0.7169819275984234,0.5005610437519205,0.7177706843498535,0.5066399420073454,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_pseudo.npz@df955ec1,,NK cell,2964.0,0.7578341685285087,0.001688222983248684,0.6438773029479863,0.00581594372602067,0.7575461751610835,0.6518937339194191,0.7591521925734661,0.6360535366729958,0.759118712724126,0.6463478711469306,0.7582973096756283,0.6428425109419765,0.7550564525082395,0.6422488620586093,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_cal.npz@40362513,,T cell,3031.0,0.6959907932247074,0.005964951015861594,0.41005830281376915,0.006564533637906565,0.6897188137656352,0.407662747175069,0.6939926679542933,0.39988349789584976,0.7030417956428053,0.41603143790154096,0.7015264275725728,0.41167361063273283,0.6916742611882305,0.41504022046365324,,,,,,,,,,,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_cal.npz@40362513,,B cell,3186.0,0.6403595809714593,0.013049510800433366,0.38802295487470784,0.010831382566801794,0.6476268503120337,0.4029136565770306,0.6356116099984017,0.38183994959591117,0.6465062856394004,0.38627679237219537,0.6523126273769201,0.37500194994503605,0.6197405315305401,0.39408242588336595,,,,,,,,,,,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_cal.npz@40362513,,Monocyte,2879.0,0.6724685858465813,0.00629779504339104,0.47061532616167223,0.004289308158479684,0.6794430956156542,0.4712146761692706,0.6792538043733346,0.475902643012463,0.6683298352638327,0.46579548965451245,0.6671312904811688,0.4668048825648782,0.6681849034989161,0.473358939407237,,,,,,,,,,,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_cal.npz@40362513,,NK cell,2964.0,0.6858507253349778,0.0032077959854115686,0.44050187045482436,0.006721069629955362,0.6848981625282067,0.44682935757726316,0.6881794350427167,0.43014777691851763,0.6899459722960254,0.44287106890817324,0.6818719611363394,0.4376932567589337,0.6843580956716008,0.44496789211123405,,,,,,,,,,,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_raw.npz@1bb5ea46,,T cell,3031.0,0.6291108490397765,0.003217518055170592,0.217988640126679,0.006025109750119285,0.6243584276044,0.21361347688466795,0.6281351224418599,0.21031943598332672,0.6329292155208367,0.2249335808924686,0.630922647767711,0.2188041726136076,0.6292088318640753,0.22227253425932414,,,,,,,,,,,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_raw.npz@1bb5ea46,,B cell,3186.0,0.5909420483211915,0.008819933318460333,0.2663691769132114,0.010402988534961534,0.5981836064264345,0.2796203177164004,0.5832027126632284,0.2546614365960385,0.6005847315547753,0.2734065475351382,0.5920278383551391,0.25796264241635314,0.5807113526063802,0.2661949403021267,,,,,,,,,,,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_raw.npz@1bb5ea46,,Monocyte,2879.0,0.6975405347583361,0.004487448008208098,0.4937373063300162,0.003269150500271371,0.6973901385551545,0.496203567525383,0.7053132591674923,0.49375108223397035,0.6945653602435833,0.48837914574470936,0.6956971727806257,0.49379523381882384,0.6947367430448246,0.4965575023271946,,,,,,,,,,,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_raw.npz@1bb5ea46,,NK cell,2964.0,0.6454988616329091,0.004007039698206298,0.3239608336784621,0.009654864176362637,0.6459591048118083,0.324146476968049,0.6447666091078287,0.30903643333692116,0.6463116982568989,0.33196201810414566,0.6396306582257892,0.32170036491612114,0.650826237762221,0.3329588750670736,,,,,,,,,,,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f
+imperial_eskd,fewshot,fewshot_n5/draw3,split_half_A_vs_B,,mean4,,0.8854442940149607,0.0032600109847487494,0.6928644358625842,0.004489722432902745,0.8857693094645639,0.69560994353287,0.8899111248914713,0.6979047355385135,0.8864506480295169,0.6922169597229424,0.8840667327634533,0.6925960948038998,0.881023654925798,0.6859944457146955,0.9378069683558478,0.9681862440679374,0.812622123455049,0.9002054731371616,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_raw,zs_raw,mean4,,0.6190086061208441,0.0027739633170965746,0.4304730668792779,0.002184275672742412,0.622313426063559,0.43146441577730993,0.6150283812051055,0.4273958634462064,0.6201578061744171,0.4292259045462187,0.6199080542701482,0.4312671153871747,0.6176353628909905,0.43301203523947973,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_pseudo,zs_pseudo,mean4,,0.6476867953332801,0.0015210223714836868,0.3028407014848712,0.0040263462446869114,0.6488824496131818,0.30308392722190786,0.6480598028312605,0.29886847799811056,0.6491381756084412,0.3085965290838003,0.6468903851122463,0.29919816435189955,0.6454631635012709,0.3044564087686378,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:zs_cal,zs_cal,mean4,,0.6449498467317288,0.0031696138030613812,0.31241775165013175,0.004230093058514687,0.6464407663741539,0.3126290068842343,0.641269628412287,0.30568822528690276,0.6490863827881235,0.3159866672797697,0.6456212449312582,0.3117526761915842,0.6423312111528213,0.31603218260816796,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:lora5,lora5,mean4,,0.735590670993942,0.0032086057771014776,0.5221275104273999,0.004211065260654662,0.7388683676491016,0.52510124997457,0.7303528435871427,0.5157345491766255,0.737267869197288,0.5228333804630176,0.7360054992972594,0.5205652985515459,0.7354587752389181,0.5264030739712409,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,generated:scsemi5,scsemi5,mean4,,0.5819482541816091,0.0076612649543166215,0.36065570623068954,0.001858796871345438,0.5836517827541847,0.3638281512869984,0.5867320166769578,0.3607639897867468,0.5826966538548712,0.3593590471454059,0.587876502705104,0.3594459795468963,0.5687843149169279,0.3598813633874003,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_raw.npz@f0a2b659,,mean4,,0.6407730734380533,0.0018514042740902415,0.3255139892620922,0.005497929358920391,0.6414728193494493,0.32839595977362507,0.6403544258451024,0.31694209703756415,0.6435977513940235,0.3296703230691155,0.6395695792823163,0.3230656034412264,0.6388707913193753,0.32949596298892975,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:all_usable_pseudo.npz@df955ec1,,mean4,,0.7552819687724203,0.0022905093612079373,0.612796673138727,0.00581848443530407,0.7565717398183003,0.6161381051536287,0.7538612938498688,0.6086929815684434,0.7583288116584608,0.6159859246169301,0.7551968255902131,0.6047166961938234,0.7524511729452587,0.6184496581608089,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_cal.npz@40362513,,mean4,,0.6736674213444316,0.004397963748979323,0.42729961357624335,0.004836988588803684,0.6754217305553825,0.43215510937465834,0.6742593793421866,0.4219434668556854,0.676955972210516,0.4277436972091055,0.6757105766417503,0.4227934249753952,0.6659894479723218,0.4318623694663726,,,,,,,,,,,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb
+imperial_eskd,fewshot,fewshot_n5/draw3,broadcast:test_raw.npz@1bb5ea46,,mean4,,0.6407730734380533,0.0018514042740902415,0.3255139892620922,0.005497929358920391,0.6414728193494493,0.32839595977362507,0.6403544258451024,0.31694209703756415,0.6435977513940235,0.3296703230691155,0.6395695792823163,0.3230656034412264,0.6388707913193753,0.32949596298892975,,,,,,,,,,,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw3/contrast.csv

@@ -0,0 +1,51 @@
+dataset,design,unit,arm,celltype,statistic,label,n_genes,pearson_r_generated,spearman_r_generated,pearson_r_broadcast,spearman_r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,condition,condition_sha256,pearson_r_generated_scorer,pearson_r_broadcast_scorer,partial_r_generated_given_broadcast_scorer,r_generated_vs_broadcast_scorer
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,T cell,mean_cp10k,"Zero-shot, real bulk",3031.0,0.6124855107398789,0.4367593282641886,0.6363131785460265,0.22211964107362986,0.41414824569664244,0.539943414230109,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6124855107398789,0.6363131785460265,0.4141482456966424,0.539943414230109
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,T cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3031.0,0.4045028568145449,0.2569662702989112,0.6151584600190607,0.4290373562305819,0.12184029838482313,0.5246193196592213,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.4045028568145449,0.6151584600190607,0.1218402983848231,0.5246193196592213
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,B cell,mean_cp10k,"Zero-shot, real bulk",3186.0,0.588850274837623,0.42464239185280916,0.6181604529907424,0.2891685908098247,0.44562112671573534,0.44518289336650385,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.588850274837623,0.6181604529907424,0.4456211267157353,0.4451828933665038
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,B cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3186.0,0.3368927050834644,0.23757675145239698,0.4479445109520174,0.3356749861200554,0.20378187541995263,0.3750417327025343,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.3368927050834644,0.4479445109520174,0.2037818754199526,0.3750417327025343
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,Monocyte,mean_cp10k,"Zero-shot, real bulk",2879.0,0.6926057136782394,0.4946884250557362,0.7038117222497147,0.5118395099271565,0.39719375417001873,0.6963470495636659,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6926057136782394,0.7038117222497147,0.3971937541700187,0.6963470495636659
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, real bulk",2879.0,0.636442770139908,0.5217048977108764,0.6894081488945825,0.5416604022437552,0.3485450545352426,0.6425602471459141,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.636442770139908,0.6894081488945825,0.3485450545352426,0.6425602471459141
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,NK cell,mean_cp10k,"Zero-shot, real bulk",2964.0,0.6114377327071373,0.4306594685127558,0.6572983397395356,0.3368773720764989,0.3804184283745059,0.5726573371208565,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6114377327071373,0.6572983397395356,0.3804184283745059,0.5726573371208565
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,NK cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",2964.0,0.41110751839861387,0.31674051648536306,0.5733589034230205,0.40490983918278867,0.19540828849577413,0.47064534666214775,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.4111075183986138,0.5733589034230205,0.1954082884957741,0.4706453466621477
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,T cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3031.0,0.6645945361736147,0.1958063687515982,0.8064531829464097,0.7145140293768902,0.34211550114233097,0.629112734365576,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.6645945361736147,0.8064531829464097,0.3421155011423309,0.629112734365576
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,T cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3031.0,0.5082348516339813,0.2904960586957578,0.7600213022941728,0.658640917680498,0.141739201338029,0.5690463166733468,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.5082348516339813,0.7600213022941728,0.141739201338029,0.5690463166733468
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,B cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3186.0,0.5551359572772101,0.2010593599419474,0.7671314071471921,0.6446207168012079,0.21936359984474776,0.5733621896366146,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.5551359572772101,0.7671314071471921,0.2193635998447477,0.5733621896366146
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,B cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3186.0,0.41834667179122137,0.3355528645535963,0.5056007459574575,0.4348821411709309,0.2815293484562661,0.3838110654077115,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.4183466717912213,0.5056007459574575,0.2815293484562661,0.3838110654077115
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,Monocyte,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",2879.0,0.7054233475859891,0.5140560135969792,0.7283099062648231,0.5279038895276017,0.3849551308527789,0.7155671678992825,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.7054233475859891,0.7283099062648231,0.3849551308527789,0.7155671678992825
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",2879.0,0.6126848877362917,0.46987605213618255,0.6381736745511231,0.48482543709719556,0.3817214444649077,0.587357487493489,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.6126848877362917,0.6381736745511231,0.3817214444649077,0.587357487493489
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,NK cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",2964.0,0.7149749797769791,0.36178612672681215,0.7712534988434764,0.6841132645067995,0.4860770956066465,0.608762732818877,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.7149749797769791,0.7712534988434764,0.4860770956066465,0.608762732818877
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,NK cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",2964.0,0.46177526874615377,0.3018362698195994,0.7055087737811083,0.5967261031305641,0.19354599365962447,0.4844434657078423,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.4617752687461537,0.7055087737811083,0.1935459936596244,0.4844434657078423
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,T cell,mean_cp10k,Zero-shot + calibration,3031.0,0.6623249823303813,0.21859799591374687,0.7036694143096747,0.4235337622079474,0.3681132066234231,0.6629731829365979,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.6623249823303813,0.7036694143096747,0.3681132066234231,0.6629731829365979
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,T cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3031.0,0.47903932135591887,0.26133686590050276,0.621388490218444,0.44358133818858714,0.13529867132094964,0.6398080608264917,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.4790393213559188,0.621388490218444,0.1352986713209496,0.6398080608264917
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,B cell,mean_cp10k,Zero-shot + calibration,3186.0,0.5816754597181741,0.2750963887257426,0.6650411785314871,0.4165347022262984,0.29424853972819753,0.6137829007420313,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.5816754597181741,0.6650411785314871,0.2942485397281975,0.6137829007420313
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,B cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3186.0,0.3832666755729807,0.31280047632122576,0.4526636224403302,0.33252341146014386,0.21583533487799347,0.471829004751337,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.3832666755729807,0.4526636224403302,0.2158353348779934,0.471829004751337
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,Monocyte,mean_cp10k,Zero-shot + calibration,2879.0,0.6890897325279419,0.4657726636970746,0.6788605077951889,0.4876859992028676,0.43838822781156234,0.6580187951975003,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.6890897325279419,0.6788605077951889,0.4383882278115623,0.6580187951975003
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,Monocyte,pseudobulk_log1p_cpm,Zero-shot + calibration,2879.0,0.5812161781110188,0.4266085751477454,0.6896580024103465,0.5492161429816186,0.2811829157755131,0.6084629687520582,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.5812161781110188,0.6896580024103465,0.2811829157755131,0.6084629687520582
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,NK cell,mean_cp10k,Zero-shot + calibration,2964.0,0.6906313430531738,0.33197405228461996,0.7012100772102766,0.4651738041652978,0.4321417154869099,0.6516265506193375,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.6906313430531738,0.7012100772102766,0.4321417154869099,0.6516265506193375
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,NK cell,pseudobulk_log1p_cpm,Zero-shot + calibration,2964.0,0.46175769460398336,0.30082863430671186,0.582474818950083,0.41564477378514075,0.20492389957116183,0.5548325748872708,test_cal.npz@40362513,40362513b4fa1934476d1e1110fde358cf26982573ab6e00bf2d5f5b2d7e5afb,0.4617576946039833,0.582474818950083,0.2049238995711618,0.5548325748872708
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,T cell,mean_cp10k,"LoRA, 5 donors",3031.0,0.8225328866121204,0.6463540264967877,0.6363131785460265,0.22211964107362986,0.7286072455952531,0.5620620128024106,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.8225328866121204,0.6363131785460265,0.7286072455952531,0.5620620128024106
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,T cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",3031.0,0.6446985442954168,0.4783167076567295,0.6151584600190607,0.4290373562305819,0.4371981079348407,0.5995870174366118,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.6446985442954168,0.6151584600190607,0.4371981079348407,0.5995870174366118
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,B cell,mean_cp10k,"LoRA, 5 donors",3186.0,0.62274235935065,0.4424193157657772,0.6181604529907424,0.2891685908098247,0.48247067152860684,0.46391790965893787,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.62274235935065,0.6181604529907424,0.4824706715286068,0.4639179096589378
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,B cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",3186.0,0.350809903279728,0.30807328581148613,0.4479445109520174,0.3356749861200554,0.22885480102155475,0.3563683383164116,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.350809903279728,0.4479445109520174,0.2288548010215547,0.3563683383164116
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,Monocyte,mean_cp10k,"LoRA, 5 donors",2879.0,0.7427423371607562,0.5331243221806274,0.7038117222497147,0.5118395099271565,0.5217632499431325,0.6593851386287463,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.7427423371607562,0.7038117222497147,0.5217632499431325,0.6593851386287463
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,Monocyte,pseudobulk_log1p_cpm,"LoRA, 5 donors",2879.0,0.6568848948029294,0.5155167402426798,0.6894081488945825,0.5416604022437552,0.412194855512953,0.6094527878457299,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.6568848948029294,0.6894081488945825,0.412194855512953,0.6094527878457299
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,NK cell,mean_cp10k,"LoRA, 5 donors",2964.0,0.7943448114261757,0.5469516010551613,0.6572983397395356,0.3368773720764989,0.6701191189597228,0.5858046433793623,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.7943448114261757,0.6572983397395356,0.6701191189597228,0.5858046433793623
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,NK cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",2964.0,0.5417757689640134,0.4081751169158443,0.5733589034230205,0.40490983918278867,0.3524381149755503,0.5124498790617447,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.5417757689640134,0.5733589034230205,0.3524381149755503,0.5124498790617447
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,T cell,mean_cp10k,"scSemiProfiler, 5 donors",3031.0,0.6061803082837304,0.5493678858196998,0.6363131785460265,0.22211964107362986,0.5407485211579497,0.3349365208264034,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.6061803082837304,0.6363131785460265,0.5407485211579497,0.3349365208264034
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,T cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",3031.0,0.43528385554171845,0.33046674607796156,0.6151584600190607,0.4290373562305819,0.30337219618746525,0.34226986924131564,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.4352838555417184,0.6151584600190607,0.3033721961874652,0.3422698692413156
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,B cell,mean_cp10k,"scSemiProfiler, 5 donors",3186.0,0.485353746615838,0.2336805353051101,0.6181604529907424,0.2891685908098247,0.35492619320968816,0.36496658657279124,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.485353746615838,0.6181604529907424,0.3549261932096881,0.3649665865727912
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,B cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",3186.0,0.14083503826669272,0.0834566661484875,0.4479445109520174,0.3356749861200554,0.00746248227369372,0.30019531822471085,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.1408350382666927,0.4479445109520174,0.0074624822736937,0.3001953182247108
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,Monocyte,mean_cp10k,"scSemiProfiler, 5 donors",2879.0,0.5994553306842716,0.2918693891746285,0.7038117222497147,0.5118395099271565,0.35989597147959185,0.5478285778796022,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.5994553306842716,0.7038117222497147,0.3598959714795918,0.5478285778796022
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,Monocyte,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",2879.0,0.435801881305859,0.3032713032146792,0.6894081488945825,0.5416604022437552,0.1691980327052629,0.4757698343084072,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.435801881305859,0.6894081488945825,0.1691980327052629,0.4757698343084072
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,NK cell,mean_cp10k,"scSemiProfiler, 5 donors",2964.0,0.6749209746335916,0.413649044428376,0.6572983397395356,0.3368773720764989,0.5785783793398267,0.4269332339414219,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.6749209746335916,0.6572983397395356,0.5785783793398267,0.4269332339414219
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,NK cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",2964.0,0.41731477392869204,0.27637854626037034,0.5733589034230205,0.40490983918278867,0.27503630325815914,0.3613894291204923,test_raw.npz@1bb5ea46,1bb5ea46702a37ba35cf81b4e82426c5cfa539ef881c477be37e40621df26b7f,0.417314773928692,0.5733589034230205,0.2750363032581591,0.3613894291204923
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,mean4,mean_cp10k,"Zero-shot, real bulk",,0.6263448079907197,0.4466874034213724,0.6538959233815048,0.3400012784717775,0.40934538873922566,0.5635326735702838,,,0.6263448079907197,0.6538959233815048,0.40934538873922555,0.5635326735702838
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,mean4,pseudobulk_log1p_cpm,"Zero-shot, real bulk",,0.4472364626091328,0.3332471089868869,0.5814675058221703,0.42782064594429525,0.21739387920894815,0.5032166615424544,,,0.44723646260913275,0.5814675058221703,0.2173938792089481,0.5032166615424544
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,mean4,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",,0.6600322052034482,0.31817696725433425,0.7682869988004754,0.6427879750531248,0.35812783186162606,0.6317012061800875,,,0.6600322052034482,0.7682869988004754,0.358127831861626,0.6317012061800875
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,mean4,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",,0.500260419976912,0.34944031130128395,0.6523261241459655,0.5437686497697971,0.24963399697970678,0.5061645838205974,,,0.500260419976912,0.6523261241459655,0.24963399697970678,0.5061645838205974
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,mean4,mean_cp10k,Zero-shot + calibration,,0.6559303794074177,0.32286027515529603,0.6871952944616568,0.44823206695060275,0.3832229224125232,0.6466003573738668,,,0.6559303794074177,0.6871952944616568,0.3832229224125232,0.6466003573738668
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,mean4,pseudobulk_log1p_cpm,Zero-shot + calibration,,0.47631996741097543,0.32539363791904646,0.586546233504801,0.4352414166038726,0.20931020538640452,0.5687331523042894,,,0.4763199674109754,0.586546233504801,0.20931020538640444,0.5687331523042894
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,mean4,mean_cp10k,"LoRA, 5 donors",,0.7455905986374256,0.5422123163745884,0.6538959233815048,0.3400012784717775,0.6007400715066787,0.5677924261173642,,,0.7455905986374256,0.6538959233815048,0.6007400715066787,0.5677924261173642
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,mean4,pseudobulk_log1p_cpm,"LoRA, 5 donors",,0.5485422778355219,0.4275204626566849,0.5814675058221703,0.42782064594429525,0.35767146986122467,0.5194645056651245,,,0.5485422778355219,0.5814675058221703,0.35767146986122467,0.5194645056651245
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,mean4,mean_cp10k,"scSemiProfiler, 5 donors",,0.5914775900543578,0.3721417136819536,0.6538959233815048,0.3400012784717775,0.4585372662967641,0.41866622980505463,,,0.5914775900543578,0.6538959233815048,0.45853726629676406,0.41866622980505463
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,mean4,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",,0.35730888726074056,0.24839331542537463,0.5814675058221703,0.42782064594429525,0.18876725360614527,0.36990611272373153,,,0.3573088872607405,0.5814675058221703,0.1887672536061452,0.3699061127237314

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw3/deg_limma.csv

@@ -0,0 +1,76 @@
+dataset,design,unit,arm,celltype,method,deg_scored,pred_defined,overlap,overlap_scorer,obs_list_size,gen_list_size,n_sig_obs,n_sig_gen,n_tested_obs,n_tested_gen,G_both,chance_overlap,broadcast_overlap,broadcast_overlap_scorer,broadcast_list_size,n_sig_broadcast,n_tested_broadcast,G_both_broadcast,broadcast_chance_overlap,condition
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,T cell,welch,True,True,27,27.0,50,50,873,1283,5747,4901,4879,0.5124000819840131,16,16.0,50,2000,5823,5649,0.442556204637989,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,B cell,welch,True,True,22,22.0,50,50,215,481,5636,4283,4262,0.5865790708587517,13,13.0,50,2000,5823,5539,0.45134500812421013,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,Monocyte,welch,True,True,28,28.0,50,50,270,1348,5628,4998,4940,0.5060728744939271,20,20.0,50,2000,5823,5533,0.45183444785830473,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,NK cell,welch,True,True,18,18.0,50,50,321,888,5579,4455,4434,0.5638249887235002,15,15.0,50,2000,5823,5483,0.4559547692868867,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,DC,welch,True,True,12,12.0,50,50,272,301,5426,4000,3977,0.6286145335680161,12,12.0,50,2000,5823,5333,0.46877929870616913,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,T cell,welch,True,True,29,29.0,50,50,873,633,5747,4781,4769,0.5242189138184106,21,21.0,50,1819,5846,5747,0.43500957021054465,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,B cell,welch,True,True,19,19.0,50,50,215,341,5636,4015,4011,0.6232859636000997,19,19.0,50,1819,5846,5636,0.44357700496806246,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,Monocyte,welch,True,True,26,26.0,50,50,270,633,5628,4318,4310,0.580046403712297,26,26.0,50,1819,5846,5628,0.44420753375977257,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,NK cell,welch,True,True,17,17.0,50,50,321,302,5579,4149,4145,0.6031363088057901,20,20.0,50,1819,5846,5579,0.4481089801039613,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,DC,welch,True,True,8,8.0,50,50,272,110,5426,3629,3624,0.6898454746136865,23,23.0,50,1819,5846,5426,0.4607445632141541,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,T cell,welch,True,True,28,28.0,50,50,873,1236,5747,4820,4804,0.5203996669442131,19,19.0,50,1964,5823,5649,0.442556204637989,test_cal.npz@40362513
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,B cell,welch,True,True,16,16.0,50,50,215,418,5636,3952,3946,0.6335529650278763,18,18.0,50,1964,5823,5539,0.45134500812421013,test_cal.npz@40362513
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,Monocyte,welch,True,True,24,24.0,50,50,270,863,5628,4364,4354,0.574184657785944,22,22.0,50,1964,5823,5533,0.45183444785830473,test_cal.npz@40362513
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