junidude14 commited on
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Archive 4 checkpoints (1-4)

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paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/failed_preflight/environment_profile.log ADDED
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+ Traceback (most recent call last):
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+ File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/scripts/train_allcell_sdd.py", line 408, in <module>
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+ main()
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+ File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/scripts/train_allcell_sdd.py", line 175, in main
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+ managed_gate()
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+ File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/scripts/train_allcell_sdd.py", line 123, in managed_gate
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+ raise RuntimeError("Use the managed all-cell training launcher")
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+ RuntimeError: Use the managed all-cell training launcher
paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/notes.md ADDED
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+ # Audit notes
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+
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+ Current parent: runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt, SHA8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633.
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+ Representative training invoked scripts/train_allcell_sdd.py from floor01_campaign/configs/6k_1x.json. Same33,141,380 training-cell universe and all-cell top-up contract must hold.
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+ Legacy trunk×4 has a different6k panel (4258 intersection only); its underway Sepsis pilot remains a separate experiment. Do not use it as the new pretrained parent.
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+
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+ Launch preflight1 stopped before CUDA at managed_gate: transient systemd units do not inherit parent PBISC_ALLCELL_MANAGED. Fix: explicit /usr/bin/env arguments inside ml-run. No training output/checkpoint created; preserve failed_preflight/environment_*.
paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/ops/CONTROLLER_UNIT.txt ADDED
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+ # /run/user/1000/systemd/transient/pbisc-f01-trunk4x-campaign-v2-20261013.service
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+ # This is a transient unit file, created programmatically via the systemd API. Do not edit.
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+ [Unit]
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+ Description=/home/sj_server_1/miniforge3/bin/python -u /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/tools/run_campaign.py
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+
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+ [Service]
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+ MemoryMax=2147483648
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+ MemorySwapMax=0
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+ OOMPolicy=kill
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+ OOMScoreAdjust=500
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+ Restart=no
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+ StandardOutput=append:/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/controller.log
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+ StandardError=append:/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/controller.log
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+ Environment="CUDA_VISIBLE_DEVICES="
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+ ExecStart=
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+ ExecStart="/home/sj_server_1/miniforge3/bin/python" "-u" "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/tools/run_campaign.py"
paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/ops/NAS_UNIT.txt ADDED
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+ # /run/user/1000/systemd/transient/pbisc-f01x4-nas-20261013.service
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+ # This is a transient unit file, created programmatically via the systemd API. Do not edit.
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+ [Unit]
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+ Description=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/runtime/sshfs -f spark-0110:/home/sj_server_2/nas_fast/PBISC/pbisc-diffusion/f01_trunk4x_complete_20261013 /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/payload -o reconnect,ServerAliveInterval=15,ServerAliveCountMax=3,BatchMode=yes
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+
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+ [Service]
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+ MemoryMax=268435456
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+ MemorySwapMax=0
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+ OOMPolicy=kill
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+ Restart=no
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+ ExecStart=
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+ ExecStart="/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/runtime/sshfs" "-f" "spark-0110:/home/sj_server_2/nas_fast/PBISC/pbisc-diffusion/f01_trunk4x_complete_20261013" "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/payload" "-o" "reconnect,ServerAliveInterval=15,ServerAliveCountMax=3,BatchMode=yes"