junidude14 commited on
Commit
598b97b
·
verified ·
1 Parent(s): ef6529b

Archive 4 checkpoints (1-4)

Browse files
paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/33e0302b4d8bb1cf/metrics.csv ADDED
@@ -0,0 +1,25 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ dataset,design,unit,label,set,real_side,mode,n_real,n_gen,precision_k3,coverage_k3,density_k3,expected_coverage_identical_k3,precision_k5,coverage_k5,density_k5,expected_coverage_identical_k5,precision_k10,coverage_k10,density_k10,expected_coverage_identical_k10,c2st_knn_auc,c2st_knn_auc_sd,c2st_rf_auc,c2st_rf_auc_sd,nn1_acc,nn1_acc_real,nn1_acc_gen,mmd2_bw0.5,mmd2_bw1,mmd2_bw2,mmd2_sum,mmd_bandwidth_m,seconds
2
+ ye2026_sepsis,scored,strict,Real vs real control (held-out real cells),real_R2,R1,raw,11550,11550,0.8730735930735931,0.9232900432900433,1.343896103896104,0.8750324682351671,0.9374891774891775,0.9863203463203464,1.3265454545454545,0.9687702904505108,0.9806926406926407,0.9997402597402597,1.3077229437229438,0.9990257609379009,0.515187777590375,0.0053962735531301815,0.5946101085062123,0.003119260231140606,0.5060606060606061,0.41783549783549784,0.5942857142857143,0.00010640162574421241,1.4265804671564908e-05,-4.2571677076885805e-06,0.00011641026270808874,27.82667328158684,40.2
3
+ ye2026_sepsis,scored,strict,Real vs real control (held-out real cells),real_R2,R1,dm,11550,11550,0.8677056277056278,0.9256277056277056,1.3341991341991342,0.8750324682351671,0.9348051948051948,0.9862337662337662,1.3143030303030303,0.9687702904505108,0.9794805194805195,0.9998268398268398,1.302865800865801,0.9990257609379009,0.5090376492194675,0.007559064453103984,0.595297989168119,0.003571870861446085,0.5036796536796537,0.4162770562770563,0.5910822510822511,0.00010460450032334645,1.4164742226263627e-05,-4.969612207306184e-06,0.00011379963034230389,27.82667328158684,40.0
4
+ ye2026_sepsis,scored,strict,Real vs real control (out-of-sample: R2 vs R3),real_R3,R2,raw,11550,11550,,,,,,,,,,,,,0.49975047319203164,0.0039381828111575475,0.49281679503757425,0.01120715597306584,0.5017748917748918,0.49705627705627703,0.5064935064935064,-6.30326922835267e-05,-3.9835239048269244e-05,-1.3536960939752873e-05,-0.00011640489227154882,27.82667328158684,35.0
5
+ ye2026_sepsis,scored,strict,Real vs real control (out-of-sample: R2 vs R3),real_R3,R2,dm,11550,11550,,,,,,,,,,,,,0.49734744476302917,0.0054872638297803755,0.4934464871347988,0.009973369630694362,0.4976190476190476,0.489004329004329,0.5062337662337663,-6.680888699639453e-05,-4.1288141783724086e-05,-1.3720039674591789e-05,-0.00012181706845471041,27.82667328158684,35.6
6
+ ye2026_sepsis,scored,strict,,lora,R1,raw,11550,11550,0.6076190476190476,0.4070995670995671,0.5674747474747476,0.8750324682351671,0.73991341991342,0.5284848484848484,0.596121212121212,0.9687702904505108,0.8816450216450217,0.6935064935064935,0.6371515151515151,0.9990257609379009,0.9340252618953917,0.0031258062556902807,0.9378812053747119,0.0021352397087890927,0.8355411255411256,0.8025108225108225,0.8685714285714285,0.021994126769488753,0.013066433542673339,0.004007952463682907,0.039068512775845,27.82667328158684,27.1
7
+ ye2026_sepsis,scored,strict,,lora,R1,dm,11550,11550,0.6595670995670996,0.596017316017316,0.878903318903319,0.8750324682351671,0.7721212121212121,0.7270995670995671,0.8884155844155843,0.9687702904505108,0.8900432900432901,0.8696103896103896,0.9176883116883117,0.9990257609379009,0.8693149303798655,0.0016392891970060382,0.902240194149285,0.0016535688895024266,0.7574891774891774,0.6932467532467532,0.8217316017316018,0.011638778472814582,0.006942364837122739,0.0023098522313107495,0.02089099554124807,27.82667328158684,27.1
8
+ ye2026_sepsis,scored,strict,,lora,R2,raw,11550,11550,,,,,,,,,,,,,0.9326399430295534,0.003541481415941684,0.9339607953374187,0.0025454092060646274,0.8319047619047619,0.841038961038961,0.8227705627705628,0.020550639113874725,0.0125691959976717,0.003967166269597255,0.03708700138114368,27.82667328158684,24.7
9
+ ye2026_sepsis,scored,strict,,lora,R2,dm,11550,11550,,,,,,,,,,,,,0.8694859916418359,0.005152567332361731,0.8971387342815914,0.0032663133545406224,0.766017316017316,0.7317748917748917,0.8002597402597402,0.010873940758546696,0.0065734884435291185,0.0022034003865052387,0.019650829588581054,27.82667328158684,24.9
10
+ ye2026_sepsis,scored,strict,,pairedcal,R1,raw,11550,11550,0.6006926406926407,0.22796536796536795,0.4567388167388167,0.8750324682351671,0.7466666666666667,0.3077056277056277,0.48133333333333334,0.9687702904505108,0.8936796536796536,0.4442424242424242,0.5188398268398269,0.9990257609379009,0.9822484398718165,0.0016334333935210622,0.9862797548771575,0.0009493431851630746,0.9335497835497836,0.898961038961039,0.9681385281385282,0.05850979724207184,0.031364084116339175,0.00949309247786001,0.09936697383627102,27.82667328158684,28.0
11
+ ye2026_sepsis,scored,strict,,pairedcal,R1,dm,11550,11550,0.6661471861471862,0.41255411255411256,0.7236075036075036,0.8750324682351671,0.7894372294372294,0.5293506493506493,0.7644675324675324,0.9687702904505108,0.9125541125541126,0.6888311688311688,0.8171428571428571,0.9990257609379009,0.9588930867112687,0.0029519905697361405,0.9697830625363093,0.0030104718472908423,0.8758008658008658,0.804069264069264,0.9475324675324676,0.04003819323409086,0.02323029949922839,0.007803664292888923,0.07107215702620817,27.82667328158684,28.2
12
+ ye2026_sepsis,scored,strict,,pairedcal,R2,raw,11550,11550,,,,,,,,,,,,,0.9837705627705627,0.0013156855824325731,0.9870458199808849,0.0004612613890120951,0.9367099567099567,0.9196536796536796,0.9537662337662338,0.05670647946785967,0.0307392272691287,0.0094194933543148,0.09686520009130317,27.82667328158684,25.7
13
+ ye2026_sepsis,scored,strict,,pairedcal,R2,dm,11550,11550,,,,,,,,,,,,,0.9572665804613857,0.0023509537770567937,0.9713581454620416,0.0008854347585239823,0.8803030303030303,0.824935064935065,0.9356709956709957,0.039337486553679746,0.022860883877286353,0.007678759782296707,0.0698771302132628,27.82667328158684,26.0
14
+ ye2026_sepsis,scored,strict,,scsemi,R1,raw,11550,11550,0.34476190476190477,0.040952380952380955,0.16473304473304473,0.8750324682351671,0.48008658008658006,0.05818181818181818,0.168987012987013,0.9687702904505108,0.6630303030303031,0.08190476190476191,0.17412987012987013,0.9990257609379009,0.9974277281160399,0.00045101111921805825,0.999547965742771,0.00010041247305350361,0.9897402597402597,0.9825108225108226,0.996969696969697,0.22126828842559987,0.14917393829184467,0.05019613477616813,0.42063836149361267,27.82667328158684,27.2
15
+ ye2026_sepsis,scored,strict,,scsemi,R1,dm,11550,11550,0.1825974025974026,0.07056277056277056,0.09696969696969697,0.8750324682351671,0.2788744588744589,0.10034632034632035,0.10941991341991342,0.9687702904505108,0.42363636363636364,0.1618181818181818,0.12026839826839826,0.9990257609379009,0.9960614306328592,0.0007195277891846192,0.9990052660182531,9.657557099092804e-05,0.9831168831168832,0.9722077922077922,0.994025974025974,0.14794139527478356,0.09230684941099732,0.0307395701276707,0.2709878148134516,27.82667328158684,28.3
16
+ ye2026_sepsis,scored,strict,,scsemi,R2,raw,11550,11550,,,,,,,,,,,,,0.9978664005547122,0.0008131033643608319,0.9995807799703904,4.964463010272483e-05,0.9913419913419913,0.987012987012987,0.9956709956709957,0.22359418912402768,0.15000393854340976,0.05047563662540866,0.4240737642928461,27.82667328158684,24.6
17
+ ye2026_sepsis,scored,strict,,scsemi,R2,dm,11550,11550,,,,,,,,,,,,,0.9959457468937989,0.0007524422320075618,0.9989569910608871,0.00018686629557198846,0.9821645021645021,0.970995670995671,0.9933333333333333,0.14833916254942847,0.09182010488884118,0.03041402340190924,0.2705732908401789,27.82667328158684,26.5
18
+ ye2026_sepsis,scored,strict,,raw,R1,raw,11550,11550,0.3141125541125541,0.03532467532467533,0.17821067821067824,0.8750324682351671,0.4380952380952381,0.0477056277056277,0.19717748917748917,0.9687702904505108,0.6367099567099567,0.07515151515151515,0.23293506493506494,0.9990257609379009,0.9971267967241992,0.0006559320728034894,0.9990913588575927,0.0001160531256186646,0.9893073593073594,0.9844155844155844,0.9941991341991342,0.15101842979972896,0.18748962632284716,0.07897149424490091,0.417479550367477,27.82667328158684,27.0
19
+ ye2026_sepsis,scored,strict,,raw,R1,dm,11550,11550,0.29714285714285715,0.03316017316017316,0.16730158730158728,0.8750324682351671,0.3974025974025974,0.04632034632034632,0.16941991341991341,0.9687702904505108,0.5984415584415584,0.07090909090909091,0.19512554112554112,0.9990257609379009,0.9974422518318622,0.0006078399264568216,0.9989353085586853,0.00019688517306939594,0.9882683982683983,0.9843290043290043,0.9922077922077922,0.1574803392964238,0.18961389683956675,0.07860586405691272,0.4257001001929033,27.82667328158684,26.7
20
+ ye2026_sepsis,scored,strict,,raw,R2,raw,11550,11550,,,,,,,,,,,,,0.9975036262438861,0.000701983849063399,0.9990022863139746,0.0003088866748755433,0.9893939393939394,0.9877056277056278,0.9910822510822511,0.1569605391554304,0.18992433092409722,0.07947025145832898,0.4263551215378566,27.82667328158684,25.0
21
+ ye2026_sepsis,scored,strict,,raw,R2,dm,11550,11550,,,,,,,,,,,,,0.9977432956653735,0.0006695563519800253,0.9988825359344841,0.0003748928387841644,0.9885714285714285,0.9875324675324675,0.9896103896103896,0.1629647997514442,0.19203428919942633,0.07914094703186447,0.434140035982735,27.82667328158684,24.7
22
+ ye2026_sepsis,scored,strict,,refcal,R1,raw,11550,11550,0.48424242424242425,0.09246753246753246,0.2888023088023088,0.8750324682351671,0.64995670995671,0.12632034632034633,0.3091082251082251,0.9687702904505108,0.8290909090909091,0.1870995670995671,0.32171428571428573,0.9990257609379009,0.992598039766871,0.0013881239283653599,0.9962621015348289,0.0004676653513482647,0.970995670995671,0.9557575757575758,0.9862337662337662,0.13615139462249798,0.08140651695410961,0.02576711206616955,0.24332502364277714,27.82667328158684,27.6
23
+ ye2026_sepsis,scored,strict,,refcal,R1,dm,11550,11550,0.47385281385281386,0.19593073593073593,0.3295815295815296,0.8750324682351671,0.6204329004329004,0.26251082251082253,0.35077056277056273,0.9687702904505108,0.8045021645021645,0.37974025974025977,0.38337662337662337,0.9990257609379009,0.986466145686925,0.0009737984432641704,0.9906763366503626,0.0005281950440243859,0.9380952380952381,0.911082251082251,0.9651082251082251,0.10032301052734965,0.06047851381230096,0.019881831826855434,0.18068335616650605,27.82667328158684,26.8
24
+ ye2026_sepsis,scored,strict,,refcal,R2,raw,11550,11550,,,,,,,,,,,,,0.9945259646558346,0.00034267419751614255,0.9966136691591236,0.0005704584618727074,0.9741991341991342,0.9672727272727273,0.9811255411255412,0.13636172303171495,0.08156778728470937,0.025923206386254893,0.24385271670267922,27.82667328158684,25.3
25
+ ye2026_sepsis,scored,strict,,refcal,R2,dm,11550,11550,,,,,,,,,,,,,0.9870176158617717,0.0011769802687448616,0.9908014654897773,0.00035576315842635167,0.9409090909090909,0.9207792207792208,0.961038961038961,0.10099707549300219,0.06076061873742877,0.019944492900335842,0.1817021871307668,27.82667328158684,25.0
paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/98a1a66c0ff314a6/imperial_eskd-disease-draw2.json ADDED
@@ -0,0 +1,628 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "state": "completed",
3
+ "at": "2026-10-15T11:30:44.233226+00:00",
4
+ "kind": "canonical_full_adoption",
5
+ "canonical_receipt": {
6
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/receipts/imperial_eskd-disease-draw2-score.json",
7
+ "sha256": "d1c8b074d6a94c0ed64d88b267d8fb6e2e4d1dfde65442d6f682e79238936b4f",
8
+ "bytes": 7752
9
+ },
10
+ "support_sha256": "7cc7f8a8c723f40018201189afbe5460063eaa6b81a1ac9198b46e388f4d9e8e",
11
+ "outputs": [
12
+ {
13
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/cat.csv",
14
+ "sha256": "82c3ebf8bd0ccd5f5d300af3f7f1f6841e7e5e37b1e1446f0b83fc7cc831a73d",
15
+ "bytes": 43881
16
+ },
17
+ {
18
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/ceiling.csv",
19
+ "sha256": "ca3df6e67850d875b599bc1e27a45913a48f9bea8b1bbd078827702128642cff",
20
+ "bytes": 19903
21
+ },
22
+ {
23
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/contrast.csv",
24
+ "sha256": "53ae41b7f5badbf9b321169e3e376db56b2c15ddb57475b8e8261641e819ef6e",
25
+ "bytes": 17056
26
+ },
27
+ {
28
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/deg_limma.csv",
29
+ "sha256": "e8b1ea498f2b5cd076e6757248ef022a63f3e2836f7877248b8eefc39d3e4cae",
30
+ "bytes": 14419
31
+ },
32
+ {
33
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/headline.csv",
34
+ "sha256": "caf4a8ebc03da890d621f7a4d6f5961fe99c82321b97e48c1d516c402ed11e53",
35
+ "bytes": 4569
36
+ },
37
+ {
38
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/limma/jobs.csv",
39
+ "sha256": "9b1bb14fde570dd087911593e93c8cd2005b270da2e87336ac5083ac75ca938b",
40
+ "bytes": 12636
41
+ },
42
+ {
43
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/limma/limma_status.csv",
44
+ "sha256": "bf414832b65ddf0a907e42486341953a1b2cb5398a21c65cd77f26af5fa754f5",
45
+ "bytes": 3425
46
+ },
47
+ {
48
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/manifest.json",
49
+ "sha256": "9b6bb2627f8f682957264b8f09aaf51f7a8cfc3fe256f14a37cd2f36a78c1f0b",
50
+ "bytes": 19976
51
+ },
52
+ {
53
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/rbo.csv",
54
+ "sha256": "c6ff8029b207361d59d0e4e7c44400db3d0024ee1306224d5096e3050fbfcc86",
55
+ "bytes": 7442
56
+ },
57
+ {
58
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/contrast/imperial_eskd/strict/repro.json",
59
+ "sha256": "a16f2a8104b71d4cb2bf53e2d8f5301a17bcb7d9c37ea08140564ffd916f3e4e",
60
+ "bytes": 1269
61
+ },
62
+ {
63
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/extras/imperial_eskd/strict/en.csv",
64
+ "sha256": "9899af8df6145f563a696f6bfe8e7958a99c2b19852ae0e5b99505e62754743f",
65
+ "bytes": 4154
66
+ },
67
+ {
68
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/extras/imperial_eskd/strict/en_per_sample.csv",
69
+ "sha256": "583cf38fa7f818649c313d9e541438cd6c75972d5ec13cda9fd4fb20683c6244",
70
+ "bytes": 364504
71
+ },
72
+ {
73
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/extras/imperial_eskd/strict/manifest.json",
74
+ "sha256": "0115582b78f7a78b6ca552d428ca1ffb8f6c4399cbd0c8f36de36e14537cb6ee",
75
+ "bytes": 5473
76
+ },
77
+ {
78
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/extras/imperial_eskd/strict/metrics.csv",
79
+ "sha256": "a3535e75198715ed3bf8f4e73b5200083a52323e773f599f71a913bac26befdb",
80
+ "bytes": 10682
81
+ },
82
+ {
83
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/extras/imperial_eskd/strict/per_donor.csv",
84
+ "sha256": "ff71e67b2a631b72d1bb84c0681a7a72d948c809f38192ece999c2100e04a545",
85
+ "bytes": 184269
86
+ },
87
+ {
88
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/extras/imperial_eskd/strict/repro.json",
89
+ "sha256": "05af0d520f346250609407307a37f8590a1ddb27359eee5ccda9d79002f4a998",
90
+ "bytes": 9405
91
+ },
92
+ {
93
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/patient_mapping.csv",
94
+ "sha256": "39d7be68ac664cfbadb1434af14d1b106f85eed5d2627fc82a7fb94addf12c04",
95
+ "bytes": 2067
96
+ },
97
+ {
98
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/lora/deg_top50_lists.csv",
99
+ "sha256": "0b6afbc43e1d0016222193a3187c49c1c155689851852fdadce5ac588572c3d5",
100
+ "bytes": 19880
101
+ },
102
+ {
103
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/lora/generated_cells.parquet",
104
+ "sha256": "b296b6b34c138bdda0172b35053edb63471fccde27e9e019fe336f99ec3535c3",
105
+ "bytes": 1571825
106
+ },
107
+ {
108
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/lora/labels/labels.manifest.json",
109
+ "sha256": "d7e12ea3b93762f17b04fcde88ce8b8d03d506050fded33c2fc738efc291ec87",
110
+ "bytes": 5041
111
+ },
112
+ {
113
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/lora/labels/labels.parquet",
114
+ "sha256": "6e3e2fa11daf4e9710e5f9a9629ab3454f45a80534045bfa0b6da22039eb8a76",
115
+ "bytes": 4560924
116
+ },
117
+ {
118
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/pairedcal/deg_top50_lists.csv",
119
+ "sha256": "e945fd16edce5d6c370a8136a058d54d4c135e4a1afa7654bc40eef7c70ade04",
120
+ "bytes": 19528
121
+ },
122
+ {
123
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/pairedcal/generated_cells.parquet",
124
+ "sha256": "389aeaa6217202e5c83e91ca96ed5a58a4aa4333af6d7bb802f5d9b42bdcb93e",
125
+ "bytes": 1599448
126
+ },
127
+ {
128
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/pairedcal/labels/labels.manifest.json",
129
+ "sha256": "22aa143caaabf0ea23b2c7a3f630e26271575c35fcd2992b9a182e0bab16518a",
130
+ "bytes": 5066
131
+ },
132
+ {
133
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/pairedcal/labels/labels.parquet",
134
+ "sha256": "921d8c451c17b50480942f7af5513c0b4dffe49402d93ff04569c384b467e7e4",
135
+ "bytes": 4479982
136
+ },
137
+ {
138
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/raw/deg_top50_lists.csv",
139
+ "sha256": "ef942f04d6387357717cd71628ca59d440232f7e7f780b463dc5f037b78070a1",
140
+ "bytes": 19880
141
+ },
142
+ {
143
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/raw/generated_cells.parquet",
144
+ "sha256": "6706e30d2b7e039f8f7ff1d4d02f3e919b5e21871fb25f2baf1841b4b37e80c1",
145
+ "bytes": 1596580
146
+ },
147
+ {
148
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/raw/labels/labels.manifest.json",
149
+ "sha256": "c5dc9234ca617ee85b8d384da54f6327ef606e624142af60efb539b61a9a479e",
150
+ "bytes": 5029
151
+ },
152
+ {
153
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/raw/labels/labels.parquet",
154
+ "sha256": "fc8ec0b0b1993129a4dea7d8b0906eff16e19a1ff90f3b1e460041b90d37ece8",
155
+ "bytes": 4275198
156
+ },
157
+ {
158
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/refcal/deg_top50_lists.csv",
159
+ "sha256": "2e4ce0f9807ba178bd024df718a25b54e402e7b9c871853a15782952e310c367",
160
+ "bytes": 19880
161
+ },
162
+ {
163
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/refcal/generated_cells.parquet",
164
+ "sha256": "719da2c5d16826886a2f573bd1be182578ad732b8475d50eaab0491820669383",
165
+ "bytes": 1600193
166
+ },
167
+ {
168
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/refcal/labels/labels.manifest.json",
169
+ "sha256": "9a762c0ab1506f344f14c0e48a164a11b6807b98a3741c5ee8a484d6a4c8bb33",
170
+ "bytes": 5047
171
+ },
172
+ {
173
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/refcal/labels/labels.parquet",
174
+ "sha256": "22094d7f3f77f8291fd7cc650546535fb1635b8deb10622f1add310900ebfcfd",
175
+ "bytes": 4531232
176
+ },
177
+ {
178
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/scsemi/deg_top50_lists.csv",
179
+ "sha256": "61f2ec4b7e6f22db899e554bc8a7caf3fe2d7c470eaa14795114dd8a98ae1943",
180
+ "bytes": 19880
181
+ },
182
+ {
183
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/scsemi/generated_cells.parquet",
184
+ "sha256": "a618de950dc1c2d7db668d4b71d471d4396d328227777fc7c2a9e9fe8b419903",
185
+ "bytes": 1450639
186
+ },
187
+ {
188
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/scsemi/labels/labels.manifest.json",
189
+ "sha256": "47d0f55cabb67e932957b89dc471843b100c95b9b21f0f06fb659050f170dd03",
190
+ "bytes": 5044
191
+ },
192
+ {
193
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/arms/scsemi/labels/labels.parquet",
194
+ "sha256": "b1ed7462bfaa179c48ebfaa599df032edd2d7e995ee8fb570605dc896e04187c",
195
+ "bytes": 4747906
196
+ },
197
+ {
198
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/contrast.csv",
199
+ "sha256": "e1dac5a03b05490b0c3c0aecb9ad46a21fa12667217e686caa8c0b0d68437e9b",
200
+ "bytes": 9792
201
+ },
202
+ {
203
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/per_donor.csv",
204
+ "sha256": "9d5cbd97a785368321da27f2681f350c2d7a52bb815f42e644530d45922fe545",
205
+ "bytes": 303839
206
+ },
207
+ {
208
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/score/summary.json",
209
+ "sha256": "7336fa367195565c2cd750ad4cbc2266c8b2c7a9980b1b8fb2b7711101e857fe",
210
+ "bytes": 59442
211
+ },
212
+ {
213
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/scoring_support.json",
214
+ "sha256": "cbd222ae933c3f56c65ceeccb60c5abe67a7e42cab8e4e75c74fd3f6b6177fdc",
215
+ "bytes": 10848
216
+ },
217
+ {
218
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_bootstrap_2000.csv",
219
+ "sha256": "56a59d101a2931bcb5b49df67fa4524724cb6c7ec230078709364465f616345b",
220
+ "bytes": 13314
221
+ },
222
+ {
223
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/donor_deg_summary.csv",
224
+ "sha256": "76d3afa813c1a79136c8deb989b2ad4c0d46b9ed08bf179c397e96d6f996cb9b",
225
+ "bytes": 3572
226
+ },
227
+ {
228
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/genes_kept.csv",
229
+ "sha256": "7cfb60964dc21b1ae020b5672c2813cba6148384d2602a3435692b0be9fe963a",
230
+ "bytes": 94840
231
+ },
232
+ {
233
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/b_cell/donor_condition_pseudobulk.csv",
234
+ "sha256": "dce0f65e4d4a86e153e2a7840cbf65490938c4997c81d00bb743d12a54fa667d",
235
+ "bytes": 44979462
236
+ },
237
+ {
238
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/b_cell/donor_limma_genes.csv",
239
+ "sha256": "ca95a64684c593f894b2435e91e27f2e4857fb939066dfdf56ec59558058d547",
240
+ "bytes": 1453639
241
+ },
242
+ {
243
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/b_cell/limma_status.json",
244
+ "sha256": "135f5e9ae9875601b3bea172a222b2e6f6dc2cad63038527194745e16e84c360",
245
+ "bytes": 3675
246
+ },
247
+ {
248
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/dc/donor_condition_pseudobulk.csv",
249
+ "sha256": "c23422634a0c4ba6dc20852b32dae484c3164c66c3932eb8e66f811910a423d3",
250
+ "bytes": 41547972
251
+ },
252
+ {
253
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/dc/donor_limma_genes.csv",
254
+ "sha256": "e02f5b3aa13a1082f6ef867206e89e3b5248efca876c7c2b2af4dbcc73da31bd",
255
+ "bytes": 1330032
256
+ },
257
+ {
258
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/dc/limma_status.json",
259
+ "sha256": "4ed31a618e595b1369cea39645e8daeee7cb91b16567b4cbb354a59aba1ef657",
260
+ "bytes": 3666
261
+ },
262
+ {
263
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/monocyte/donor_condition_pseudobulk.csv",
264
+ "sha256": "d8bf00c871e52e491c2e79ce906c84b0e7e45da2ae7b5c04ba646b4746725f1e",
265
+ "bytes": 46749047
266
+ },
267
+ {
268
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/monocyte/donor_limma_genes.csv",
269
+ "sha256": "0be552ed5975cfae0cd1697d7c0e40326421482017c4be7a9c97dcaa11c4fc38",
270
+ "bytes": 1469951
271
+ },
272
+ {
273
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/monocyte/limma_status.json",
274
+ "sha256": "bd026ee7934571a10af893dff5a72251e5bab1c08ae3f165801af7374389b99b",
275
+ "bytes": 3678
276
+ },
277
+ {
278
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/nk_cell/donor_condition_pseudobulk.csv",
279
+ "sha256": "255f4dcfacfacda3b326a9455c573bc6e03c1d17dca2bada04e1a0be31526bae",
280
+ "bytes": 45878465
281
+ },
282
+ {
283
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/nk_cell/donor_limma_genes.csv",
284
+ "sha256": "636689e963a4d21da790b3c8de6021202d562b17d9f7f420ba567dd5769961ea",
285
+ "bytes": 1459381
286
+ },
287
+ {
288
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/nk_cell/limma_status.json",
289
+ "sha256": "3b5f7fd583cb14d5e1725a9254a1c13b4637e1e0b56424efab6349824eb051f6",
290
+ "bytes": 3677
291
+ },
292
+ {
293
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/t_cell/donor_condition_pseudobulk.csv",
294
+ "sha256": "9390086ba3b859957abdfb34bab001db73031c4b7807a831d01eb9ec909018fc",
295
+ "bytes": 45297186
296
+ },
297
+ {
298
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/t_cell/donor_limma_genes.csv",
299
+ "sha256": "df48094258f3e3bde8797c8ce8f0e44da4edac7e0ad4c8874e22c2ae1e34f278",
300
+ "bytes": 1571768
301
+ },
302
+ {
303
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/lora/t_cell/limma_status.json",
304
+ "sha256": "2425a3a8454ad8f42d658b1dc605e4b3ee1bec5c134c99ce967a4cbfab8cbe98",
305
+ "bytes": 3675
306
+ },
307
+ {
308
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/b_cell/donor_condition_pseudobulk.csv",
309
+ "sha256": "2ffb69ea3e9351d8c1d57a2cbdf39c76d8ee21503bf0d06143dd2e7b33641b65",
310
+ "bytes": 47085586
311
+ },
312
+ {
313
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/b_cell/donor_limma_genes.csv",
314
+ "sha256": "05e424ac4a4f02d60dc536b4e992130ff7e19a4e4104f09e7a175e8aea902d5a",
315
+ "bytes": 1482055
316
+ },
317
+ {
318
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/b_cell/limma_status.json",
319
+ "sha256": "686eb9f897ca25d3009c2e9cb95c4b59c7ef25cdaf14f4316a0dd486efd7f2f3",
320
+ "bytes": 3680
321
+ },
322
+ {
323
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/dc/donor_condition_pseudobulk.csv",
324
+ "sha256": "8d7b541c6fafa5cca6a751585c94607a05dd38ebf145bfd3c12172061185d91c",
325
+ "bytes": 43619159
326
+ },
327
+ {
328
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/dc/donor_limma_genes.csv",
329
+ "sha256": "5ccf33266187f3e4a51b4344115decc66cdaafe728e65902bf177a923b3a7eea",
330
+ "bytes": 1339967
331
+ },
332
+ {
333
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/dc/limma_status.json",
334
+ "sha256": "5512d9a9cfb09d8a7361c9db35e2c09b2769d16128da3395b7244eb18f257523",
335
+ "bytes": 3672
336
+ },
337
+ {
338
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/monocyte/donor_condition_pseudobulk.csv",
339
+ "sha256": "f6aca3f269f18c95c2de927abc4982778fc32a48eb4a95cc0974792dfc91931e",
340
+ "bytes": 48871873
341
+ },
342
+ {
343
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/monocyte/donor_limma_genes.csv",
344
+ "sha256": "4f583b872e3c84c5b3a1952418a69e11e7df4a9b89abd6c0f7b555df626d18ed",
345
+ "bytes": 1552410
346
+ },
347
+ {
348
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/monocyte/limma_status.json",
349
+ "sha256": "29b339f047d3aa4470c8786d1f2e0b9fdf37ec2ac57c99dac97f251e312cda63",
350
+ "bytes": 3683
351
+ },
352
+ {
353
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/nk_cell/donor_condition_pseudobulk.csv",
354
+ "sha256": "d5b20770f15c46738e5266c4ebf399247caecafbc562c8f6fd37e03c9f40a091",
355
+ "bytes": 47999525
356
+ },
357
+ {
358
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/nk_cell/donor_limma_genes.csv",
359
+ "sha256": "f5992ac0361e595acff356165c7d6089d620f4708e15e4e56d5482ed80120689",
360
+ "bytes": 1510573
361
+ },
362
+ {
363
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/nk_cell/limma_status.json",
364
+ "sha256": "a2c650c30c4dfe461f3bf14906e9035e919efbe976df49f8e12bb37eb468690e",
365
+ "bytes": 3683
366
+ },
367
+ {
368
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/t_cell/donor_condition_pseudobulk.csv",
369
+ "sha256": "db8fa3f08c9353ffda36fb19dd2465b9bf393122bde4bb00e6a8ff462ad44e1b",
370
+ "bytes": 47417958
371
+ },
372
+ {
373
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/t_cell/donor_limma_genes.csv",
374
+ "sha256": "ed864f967360d12cc69a6b433b9768147caceb46cf7aa646c5a64c5df5b09fae",
375
+ "bytes": 1626761
376
+ },
377
+ {
378
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/pairedcal/t_cell/limma_status.json",
379
+ "sha256": "8ad5be5c6d2bcd04e81cf7a7b8bbc141e001da93e2ed599ab642be88faa09643",
380
+ "bytes": 3680
381
+ },
382
+ {
383
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/b_cell/donor_condition_pseudobulk.csv",
384
+ "sha256": "5c37b967bf641209453c467a46339c69e583a43ba0cd02c979745baa9c9621a8",
385
+ "bytes": 44593893
386
+ },
387
+ {
388
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/b_cell/donor_limma_genes.csv",
389
+ "sha256": "704387dbdda03624a204fae8537c7b10684c7452fd183b1ecd01e7692162df39",
390
+ "bytes": 1506985
391
+ },
392
+ {
393
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/b_cell/limma_status.json",
394
+ "sha256": "01c00798bd575216384fb5cf89edcf6fc0469cea66fc3c563be46eeb6c3fb10d",
395
+ "bytes": 3674
396
+ },
397
+ {
398
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/dc/donor_condition_pseudobulk.csv",
399
+ "sha256": "b44be2e62056c4469106e7ddaf9071a6e60ea01f700ed391a861005a7d606253",
400
+ "bytes": 41135548
401
+ },
402
+ {
403
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/dc/donor_limma_genes.csv",
404
+ "sha256": "47636a810e19092bc0bd17c7edaa90eeb83df09e14755fd49d16db5aaf836b19",
405
+ "bytes": 1381217
406
+ },
407
+ {
408
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/dc/limma_status.json",
409
+ "sha256": "2d05b3cd485b082faf8c9863bddde9fef2d4ffa7534c4ecf6cb10a16cb0b02fc",
410
+ "bytes": 3667
411
+ },
412
+ {
413
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/monocyte/donor_condition_pseudobulk.csv",
414
+ "sha256": "ffcafec1c2b2c791628eda1c7676cd6e3d422a134c64ddc7157185a27ceb21b7",
415
+ "bytes": 46494598
416
+ },
417
+ {
418
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/monocyte/donor_limma_genes.csv",
419
+ "sha256": "d88e2536ab0054e537ff88b53e678a4f66f375d703d2bb26b94b403c671288c9",
420
+ "bytes": 1623033
421
+ },
422
+ {
423
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/monocyte/limma_status.json",
424
+ "sha256": "8702897fa227f49b2cc1751252fea949e5eec0cfadcd6aac85bc30737c7869ba",
425
+ "bytes": 3677
426
+ },
427
+ {
428
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/nk_cell/donor_condition_pseudobulk.csv",
429
+ "sha256": "38e2cca4daa003a3bb695bf9b23ee316c75b1ed48781a0aa3087706662df9b32",
430
+ "bytes": 45502102
431
+ },
432
+ {
433
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/nk_cell/donor_limma_genes.csv",
434
+ "sha256": "becd9b6ffd3f25a214af9cd5fbb8d1df3c76da1de011a4115d886ee4caae0a2e",
435
+ "bytes": 1531043
436
+ },
437
+ {
438
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/nk_cell/limma_status.json",
439
+ "sha256": "235b9c1a44a1dfcd7bb5bfcc7bdb75749d8942c51aaa22456fcb648e6d385fec",
440
+ "bytes": 3676
441
+ },
442
+ {
443
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/t_cell/donor_condition_pseudobulk.csv",
444
+ "sha256": "ab2e94ced3668bdc5002dfc60bc1950fd532f9332b634ed70b8b1f0ce9045977",
445
+ "bytes": 44893138
446
+ },
447
+ {
448
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/t_cell/donor_limma_genes.csv",
449
+ "sha256": "e2e15e3f08c091e1f2484eeb563a765d0c8b890b31f773f7f273f240d7f4989a",
450
+ "bytes": 1610677
451
+ },
452
+ {
453
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/raw/t_cell/limma_status.json",
454
+ "sha256": "3774f1d9f3cbc0b0b5bda901305a6a419f2154db040569c5b977ba0f43de3006",
455
+ "bytes": 3674
456
+ },
457
+ {
458
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/b_cell/donor_condition_pseudobulk.csv",
459
+ "sha256": "18dbd06fd4dfff4917436c775c9ab4cb934f8fb5d6d4ea13b8f0216cfd374516",
460
+ "bytes": 45832250
461
+ },
462
+ {
463
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/b_cell/donor_limma_genes.csv",
464
+ "sha256": "e072471e63db279defd6be2845a02d9ebdd3d73260c8067171b415344f3e981e",
465
+ "bytes": 1478816
466
+ },
467
+ {
468
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/b_cell/limma_status.json",
469
+ "sha256": "0edc085f9782b5e0a1d5e9f16a0b95508f825dc8b8a77b10a0d2268ae3f27c8d",
470
+ "bytes": 3677
471
+ },
472
+ {
473
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/dc/donor_condition_pseudobulk.csv",
474
+ "sha256": "203673f0680fee28f69a2688ba2ff90c54be5a6d8239ae2805cd94a831263ad8",
475
+ "bytes": 42377743
476
+ },
477
+ {
478
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/dc/donor_limma_genes.csv",
479
+ "sha256": "89ff3e9946c77c0e871c14f7217365a27faecbc6019fff8df8af1d58d1d0dc19",
480
+ "bytes": 1362390
481
+ },
482
+ {
483
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/dc/limma_status.json",
484
+ "sha256": "bb33e60c03c29b057403dae1594206dbc0f2659f306013775d9efedec326fc96",
485
+ "bytes": 3669
486
+ },
487
+ {
488
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/monocyte/donor_condition_pseudobulk.csv",
489
+ "sha256": "1ef42f1ac7858efa0b93695ea678ea60cb25ca5768295e32b40d1bedc76353f5",
490
+ "bytes": 47641888
491
+ },
492
+ {
493
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/monocyte/donor_limma_genes.csv",
494
+ "sha256": "ae42a34ad8d713df172a8a364d4c8405a75deef3c0fbd06ef04f658ce4ea6bea",
495
+ "bytes": 1561923
496
+ },
497
+ {
498
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/monocyte/limma_status.json",
499
+ "sha256": "6935315a8af1608aeaf07125a91c47122df94620822c7625bb10709f22812151",
500
+ "bytes": 3679
501
+ },
502
+ {
503
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/nk_cell/donor_condition_pseudobulk.csv",
504
+ "sha256": "ef4c9e85b03f665977add8141701cc4063e3e6b3e0dedb4f4e6bd13498b85644",
505
+ "bytes": 46709702
506
+ },
507
+ {
508
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/nk_cell/donor_limma_genes.csv",
509
+ "sha256": "5bda31b51ea06f32259e857b3234b8c67a0636db9814548ffc762e0ef5d2ec0d",
510
+ "bytes": 1465192
511
+ },
512
+ {
513
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/nk_cell/limma_status.json",
514
+ "sha256": "e06e9c255a104c23acd98289b7558e9489b711c044043a90795f7c7b74b28f11",
515
+ "bytes": 3680
516
+ },
517
+ {
518
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/t_cell/donor_condition_pseudobulk.csv",
519
+ "sha256": "a9e354608b5336f4d96edb5db6ee8ecb188e8c1ab1553db3227d0976af6ae9e4",
520
+ "bytes": 46126159
521
+ },
522
+ {
523
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/t_cell/donor_limma_genes.csv",
524
+ "sha256": "d9154a7a55f7ae50166353701597d4384e380021a78ba97132fd47f77fa7de7f",
525
+ "bytes": 1621847
526
+ },
527
+ {
528
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/refcal/t_cell/limma_status.json",
529
+ "sha256": "3baacb99d578e196bb12b3d0fd4a1f3a50810cd7e775e208a3a0ea8d14cd1c01",
530
+ "bytes": 3677
531
+ },
532
+ {
533
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/b_cell/donor_condition_pseudobulk.csv",
534
+ "sha256": "32479b3f02ffdecfec4bd1424729dd5339a2e37281a8801955a210304281a276",
535
+ "bytes": 45482784
536
+ },
537
+ {
538
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/b_cell/donor_limma_genes.csv",
539
+ "sha256": "dff360553d5625e8758a117a4e3362ab1eaca1c14e4ce992544e50b74e0a83be",
540
+ "bytes": 1146297
541
+ },
542
+ {
543
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/b_cell/limma_status.json",
544
+ "sha256": "09020baa337daefe3cfebfb6e601887e50fbcdbd5fa65a3f88eca0de44b60bc8",
545
+ "bytes": 3677
546
+ },
547
+ {
548
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/dc/donor_condition_pseudobulk.csv",
549
+ "sha256": "ac8c3501444e4d3811ad1bb1005cfebd77f32ebc79efc63a30c763da498b1988",
550
+ "bytes": 42343311
551
+ },
552
+ {
553
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/dc/donor_limma_genes.csv",
554
+ "sha256": "b8ba180a7ce238b8395cefaf0a09cdc4d36cb1518a2bb13c8a48b7cfb9f609dc",
555
+ "bytes": 1036589
556
+ },
557
+ {
558
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/dc/limma_status.json",
559
+ "sha256": "0624462b152283731b9256b28514418d0728ff650cf396a0adfaaa0be5153ff6",
560
+ "bytes": 3669
561
+ },
562
+ {
563
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/monocyte/donor_condition_pseudobulk.csv",
564
+ "sha256": "bd6f93d77fe9d798a3b08423341fde99106061992d2ad66003ebfd710219e585",
565
+ "bytes": 47205028
566
+ },
567
+ {
568
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/monocyte/donor_limma_genes.csv",
569
+ "sha256": "9e4fe4abb9a361483dd3aae0ae026cad4093845b5a312a281af5388769d7b8e0",
570
+ "bytes": 1140385
571
+ },
572
+ {
573
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/monocyte/limma_status.json",
574
+ "sha256": "7e8df25dd4c0ff5d1c5a60d02875fe61c11642891c32bfefebdecff389caf59b",
575
+ "bytes": 3681
576
+ },
577
+ {
578
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/nk_cell/donor_condition_pseudobulk.csv",
579
+ "sha256": "56ef4694bc81a06443ec381ae3b7c9bbd361801f7923c67933b2ece62d1e5a59",
580
+ "bytes": 46362025
581
+ },
582
+ {
583
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/nk_cell/donor_limma_genes.csv",
584
+ "sha256": "67b4705edc00f399d345dbb161697b66512f5d45050408b66c1c99b4720cdcd9",
585
+ "bytes": 1304564
586
+ },
587
+ {
588
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/nk_cell/limma_status.json",
589
+ "sha256": "cceb16b8878db5b0a472e8cf1c179c818ba4d9d93999b61239adcc3c8de1e586",
590
+ "bytes": 3680
591
+ },
592
+ {
593
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/t_cell/donor_condition_pseudobulk.csv",
594
+ "sha256": "2be9e5949447a9d4d2d440631b306c614c40d29a08910f5c7b3061a0b8f62a3b",
595
+ "bytes": 45980508
596
+ },
597
+ {
598
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/t_cell/donor_limma_genes.csv",
599
+ "sha256": "fd9adfe7fb110f03290442168dcd02942b94a178b494357b219fcfeff312149b",
600
+ "bytes": 1428934
601
+ },
602
+ {
603
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/donor_deg/scsemi/t_cell/limma_status.json",
604
+ "sha256": "a2514db943e53588145e89ecf4d3dfbff5b928918cc5d78e6d7ef372785678c7",
605
+ "bytes": 3677
606
+ },
607
+ {
608
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/patient_mapping.csv",
609
+ "sha256": "39d7be68ac664cfbadb1434af14d1b106f85eed5d2627fc82a7fb94addf12c04",
610
+ "bytes": 2067
611
+ },
612
+ {
613
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/per_donor_long.csv",
614
+ "sha256": "37e23734aa67a56e393dc9588a637791ad3a3ef718eedafc1836debab488b648",
615
+ "bytes": 1125633
616
+ },
617
+ {
618
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/per_donor_long_all.csv",
619
+ "sha256": "37e23734aa67a56e393dc9588a637791ad3a3ef718eedafc1836debab488b648",
620
+ "bytes": 1125633
621
+ },
622
+ {
623
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/imperial_eskd/disease/draw2/statistics/status.json",
624
+ "sha256": "5423c4034a9a6540255741f379b26137993cf795fa1de26db79cbf220958036f",
625
+ "bytes": 694
626
+ }
627
+ ]
628
+ }
paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/c2620874b8a5fde3/summary.json ADDED
@@ -0,0 +1,1887 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema": "paired_ft_scores.v1",
3
+ "dataset": "ye2026_sepsis",
4
+ "written_utc": "2026-10-12T17:41:38.799629+00:00",
5
+ "command": [
6
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
7
+ "--dataset",
8
+ "ye2026_sepsis",
9
+ "--out",
10
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/ye2026_sepsis/disease/draw4/score",
11
+ "--donors",
12
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/ye2026_sepsis/disease/draw4/test_sample_ids.txt",
13
+ "--threads",
14
+ "4",
15
+ "--arm",
16
+ "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw4/lora.npz",
17
+ "--arm",
18
+ "pairedcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw4/pairedcal.npz",
19
+ "--arm",
20
+ "scsemi=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw4/scsemi.npz",
21
+ "--arm",
22
+ "raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/raw.npz",
23
+ "--arm",
24
+ "refcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/refcal.npz",
25
+ "--case-groups",
26
+ "adult_sepsis,ped_sepsis",
27
+ "--control-groups",
28
+ "adult_HC,adult_ICU_ctrl,ped_HC,ped_ICU_ctrl"
29
+ ],
30
+ "arms": [
31
+ "lora",
32
+ "pairedcal",
33
+ "scsemi",
34
+ "raw",
35
+ "refcal"
36
+ ],
37
+ "donors": [
38
+ "Abd-PS04",
39
+ "Abd-PS05",
40
+ "Abd-PS07",
41
+ "Abd-PS19",
42
+ "Abd-PS20",
43
+ "Abd-PS23",
44
+ "Abd-PS27",
45
+ "Abd-S103",
46
+ "Abd-S120",
47
+ "Abd-S123",
48
+ "Abd-S156",
49
+ "Abd-S39",
50
+ "Abd-S42",
51
+ "Abd-S47",
52
+ "Abd-S51",
53
+ "Abd-S54",
54
+ "Abd-S57",
55
+ "Abd-S66",
56
+ "Abd-S79",
57
+ "Abd-S83",
58
+ "Abd-S98",
59
+ "HC01",
60
+ "HC05",
61
+ "HC07",
62
+ "HC09",
63
+ "HC12",
64
+ "HC13",
65
+ "HC16",
66
+ "IC10",
67
+ "IC15",
68
+ "IC16",
69
+ "IC19",
70
+ "IC22",
71
+ "PHC01",
72
+ "PHC02",
73
+ "PHC03",
74
+ "PHC05",
75
+ "PIC01",
76
+ "PIC02",
77
+ "PIC04",
78
+ "PIC05",
79
+ "Res-PS02",
80
+ "Res-PS03",
81
+ "Res-PS12",
82
+ "Res-PS16",
83
+ "Res-PS21",
84
+ "Res-PS25",
85
+ "Res-PS26",
86
+ "Res-S10",
87
+ "Res-S125",
88
+ "Res-S127",
89
+ "Res-S136",
90
+ "Res-S139",
91
+ "Res-S146",
92
+ "Res-S149",
93
+ "Res-S150",
94
+ "Res-S164",
95
+ "Res-S166",
96
+ "Res-S174",
97
+ "Res-S177",
98
+ "Res-S184",
99
+ "Res-S19",
100
+ "Res-S26",
101
+ "Res-S40",
102
+ "Res-S77",
103
+ "Res-S87",
104
+ "Skin-S140",
105
+ "Skin-S152",
106
+ "Skin-S38",
107
+ "Skin-S43",
108
+ "Skin-S52",
109
+ "Skin-S74",
110
+ "Uri-S134",
111
+ "Uri-S147",
112
+ "Uri-S157",
113
+ "Uri-S20",
114
+ "Uri-S93"
115
+ ],
116
+ "n_donors": 77,
117
+ "reference": {
118
+ "cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/ye2026_sepsis",
119
+ "reference_sha256": "bac12da8a241652cb75100a1b082b2be56806c9bf2fd20ce6f927f19683ea5b8",
120
+ "features_sha256": "0cfda4b0cf1caf5e5319d071697c228d894e992fd090e2b3ed450bd6c9887d46",
121
+ "n_r1_cells": 11550,
122
+ "pca": {
123
+ "n_components": 50,
124
+ "explained_variance_ratio_sum": 0.3349785804748535,
125
+ "n_fit_cells": 11550
126
+ },
127
+ "r2_control": {
128
+ "precision": 0.9806926406926407,
129
+ "coverage": 0.9997402597402597,
130
+ "density": 1.3077229437229438,
131
+ "n_query": 11550,
132
+ "depth_matched": {
133
+ "precision": 0.9794805194805195,
134
+ "coverage": 0.9998268398268398,
135
+ "density": 1.302865800865801
136
+ }
137
+ },
138
+ "observed_l1_loo_null_mean": 0.5181561061909782
139
+ },
140
+ "contrast_definition": {
141
+ "enabled": true,
142
+ "rule": "explicit --case-groups / --control-groups",
143
+ "group_source": "features groups",
144
+ "case_groups": [
145
+ "adult_sepsis",
146
+ "ped_sepsis"
147
+ ],
148
+ "control_groups": [
149
+ "adult_HC",
150
+ "adult_ICU_ctrl",
151
+ "ped_HC",
152
+ "ped_ICU_ctrl"
153
+ ],
154
+ "n_case_donors": 57,
155
+ "n_control_donors": 20,
156
+ "n_donors_in_neither": 0,
157
+ "case": [
158
+ true,
159
+ true,
160
+ true,
161
+ true,
162
+ true,
163
+ true,
164
+ true,
165
+ true,
166
+ true,
167
+ true,
168
+ true,
169
+ true,
170
+ true,
171
+ true,
172
+ true,
173
+ true,
174
+ true,
175
+ true,
176
+ true,
177
+ true,
178
+ true,
179
+ false,
180
+ false,
181
+ false,
182
+ false,
183
+ false,
184
+ false,
185
+ false,
186
+ false,
187
+ false,
188
+ false,
189
+ false,
190
+ false,
191
+ false,
192
+ false,
193
+ false,
194
+ false,
195
+ false,
196
+ false,
197
+ false,
198
+ false,
199
+ true,
200
+ true,
201
+ true,
202
+ true,
203
+ true,
204
+ true,
205
+ true,
206
+ true,
207
+ true,
208
+ true,
209
+ true,
210
+ true,
211
+ true,
212
+ true,
213
+ true,
214
+ true,
215
+ true,
216
+ true,
217
+ true,
218
+ true,
219
+ true,
220
+ true,
221
+ true,
222
+ true,
223
+ true,
224
+ true,
225
+ true,
226
+ true,
227
+ true,
228
+ true,
229
+ true,
230
+ true,
231
+ true,
232
+ true,
233
+ true,
234
+ true
235
+ ],
236
+ "ctrl": [
237
+ false,
238
+ false,
239
+ false,
240
+ false,
241
+ false,
242
+ false,
243
+ false,
244
+ false,
245
+ false,
246
+ false,
247
+ false,
248
+ false,
249
+ false,
250
+ false,
251
+ false,
252
+ false,
253
+ false,
254
+ false,
255
+ false,
256
+ false,
257
+ false,
258
+ true,
259
+ true,
260
+ true,
261
+ true,
262
+ true,
263
+ true,
264
+ true,
265
+ true,
266
+ true,
267
+ true,
268
+ true,
269
+ true,
270
+ true,
271
+ true,
272
+ true,
273
+ true,
274
+ true,
275
+ true,
276
+ true,
277
+ true,
278
+ false,
279
+ false,
280
+ false,
281
+ false,
282
+ false,
283
+ false,
284
+ false,
285
+ false,
286
+ false,
287
+ false,
288
+ false,
289
+ false,
290
+ false,
291
+ false,
292
+ false,
293
+ false,
294
+ false,
295
+ false,
296
+ false,
297
+ false,
298
+ false,
299
+ false,
300
+ false,
301
+ false,
302
+ false,
303
+ false,
304
+ false,
305
+ false,
306
+ false,
307
+ false,
308
+ false,
309
+ false,
310
+ false,
311
+ false,
312
+ false,
313
+ false
314
+ ],
315
+ "groups": [
316
+ "ped_sepsis",
317
+ "ped_sepsis",
318
+ "ped_sepsis",
319
+ "ped_sepsis",
320
+ "ped_sepsis",
321
+ "ped_sepsis",
322
+ "ped_sepsis",
323
+ "adult_sepsis",
324
+ "adult_sepsis",
325
+ "adult_sepsis",
326
+ "adult_sepsis",
327
+ "adult_sepsis",
328
+ "adult_sepsis",
329
+ "adult_sepsis",
330
+ "adult_sepsis",
331
+ "adult_sepsis",
332
+ "adult_sepsis",
333
+ "adult_sepsis",
334
+ "adult_sepsis",
335
+ "adult_sepsis",
336
+ "adult_sepsis",
337
+ "adult_HC",
338
+ "adult_HC",
339
+ "adult_HC",
340
+ "adult_HC",
341
+ "adult_HC",
342
+ "adult_HC",
343
+ "adult_HC",
344
+ "adult_ICU_ctrl",
345
+ "adult_ICU_ctrl",
346
+ "adult_ICU_ctrl",
347
+ "adult_ICU_ctrl",
348
+ "adult_ICU_ctrl",
349
+ "ped_HC",
350
+ "ped_HC",
351
+ "ped_HC",
352
+ "ped_HC",
353
+ "ped_ICU_ctrl",
354
+ "ped_ICU_ctrl",
355
+ "ped_ICU_ctrl",
356
+ "ped_ICU_ctrl",
357
+ "ped_sepsis",
358
+ "ped_sepsis",
359
+ "ped_sepsis",
360
+ "ped_sepsis",
361
+ "ped_sepsis",
362
+ "ped_sepsis",
363
+ "ped_sepsis",
364
+ "adult_sepsis",
365
+ "adult_sepsis",
366
+ "adult_sepsis",
367
+ "adult_sepsis",
368
+ "adult_sepsis",
369
+ "adult_sepsis",
370
+ "adult_sepsis",
371
+ "adult_sepsis",
372
+ "adult_sepsis",
373
+ "adult_sepsis",
374
+ "adult_sepsis",
375
+ "adult_sepsis",
376
+ "adult_sepsis",
377
+ "adult_sepsis",
378
+ "adult_sepsis",
379
+ "adult_sepsis",
380
+ "adult_sepsis",
381
+ "adult_sepsis",
382
+ "adult_sepsis",
383
+ "adult_sepsis",
384
+ "adult_sepsis",
385
+ "adult_sepsis",
386
+ "adult_sepsis",
387
+ "adult_sepsis",
388
+ "adult_sepsis",
389
+ "adult_sepsis",
390
+ "adult_sepsis",
391
+ "adult_sepsis",
392
+ "adult_sepsis"
393
+ ]
394
+ },
395
+ "deg_definition": {
396
+ "enabled": true,
397
+ "score": "top-50 DEG overlap per cell type (benchmark total_top50_overlap, Welch backend)",
398
+ "source": "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py",
399
+ "functions": [
400
+ "welch_bh_deg",
401
+ "top_deg_genes",
402
+ "jaccard"
403
+ ],
404
+ "reproduces": "utility_studies_final6k_20260925/sle top-50 DEG 81 (1,006 genes) / 84 (2,279 genes) = sum over the six gated types of top50_overlap_count",
405
+ "top_n": 50,
406
+ "fdr": 0.05,
407
+ "n_genes": 5975,
408
+ "types": [
409
+ "T cell",
410
+ "B cell",
411
+ "Monocyte",
412
+ "NK cell",
413
+ "DC"
414
+ ],
415
+ "aggregates_source": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/ye2026_sepsis/deg_reference.npz",
416
+ "aggregates_sha256": "9886ea64da90b1db6a07984d5d61d7dab04ee0beee7d4094ee3672316c2691d0",
417
+ "aggregates_note": null,
418
+ "types_not_scored_observed": [],
419
+ "observed": {
420
+ "T cell": {
421
+ "n_significant": 1511,
422
+ "n_tested": 5801,
423
+ "n_case_donors": 57,
424
+ "n_control_donors": 20,
425
+ "n_cells": 277774,
426
+ "top_list_size": 50
427
+ },
428
+ "B cell": {
429
+ "n_significant": 932,
430
+ "n_tested": 5743,
431
+ "n_case_donors": 57,
432
+ "n_control_donors": 20,
433
+ "n_cells": 92596,
434
+ "top_list_size": 50
435
+ },
436
+ "Monocyte": {
437
+ "n_significant": 2357,
438
+ "n_tested": 5749,
439
+ "n_case_donors": 57,
440
+ "n_control_donors": 20,
441
+ "n_cells": 98968,
442
+ "top_list_size": 50
443
+ },
444
+ "NK cell": {
445
+ "n_significant": 1071,
446
+ "n_tested": 5614,
447
+ "n_case_donors": 57,
448
+ "n_control_donors": 20,
449
+ "n_cells": 45385,
450
+ "top_list_size": 50
451
+ },
452
+ "DC": {
453
+ "n_significant": 1473,
454
+ "n_tested": 5305,
455
+ "n_case_donors": 53,
456
+ "n_control_donors": 20,
457
+ "n_cells": 3031,
458
+ "top_list_size": 50
459
+ }
460
+ },
461
+ "broadcast": "welch_bh_deg + top_deg_genes on the arm's condition bulk_counts (scoring genes, case|control donors), one list compared with every type's observed list (sle_broadcast.py broadcast_input_bulk); not part of the published benchmark"
462
+ },
463
+ "headline": {
464
+ "lora": {
465
+ "comp_l1": 0.390430034908782,
466
+ "comp_l1_obs_loo_null": 0.5181561061909782,
467
+ "precision": 0.8816450216450217,
468
+ "coverage": 0.6935064935064935,
469
+ "precision_dm": 0.8900432900432901,
470
+ "coverage_dm": 0.8696103896103896,
471
+ "pb_r_median": 0.885001251773162,
472
+ "pb_top1": 0.11688311688311688,
473
+ "mono_pct_gen": 17.583549783549785,
474
+ "mono_pct_obs": 20.318176241847713,
475
+ "median_umi_gen": 1570.0,
476
+ "median_umi_obs": 1982.0,
477
+ "contrast_mean_cp10k_r_gen": 0.48712224362180245,
478
+ "contrast_pseudobulk_log1p_cpm_r_gen": 0.402816631149953,
479
+ "contrast_mean_cp10k_r_broadcast": 0.3195942137906433,
480
+ "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.2882391251218291,
481
+ "deg_top50_T": 6,
482
+ "deg_top50_B": 6,
483
+ "deg_top50_Mono": 3,
484
+ "deg_top50_NK": 0,
485
+ "deg_top50_DC": 0,
486
+ "deg_top50_sum": 15,
487
+ "deg_top50_max": 250,
488
+ "deg_top50_sum_4type": 15,
489
+ "deg_top50_sum_broadcast": 20,
490
+ "seconds": 18.2
491
+ },
492
+ "pairedcal": {
493
+ "comp_l1": 0.41979307710497205,
494
+ "comp_l1_obs_loo_null": 0.5181561061909782,
495
+ "precision": 0.8936796536796536,
496
+ "coverage": 0.4442424242424242,
497
+ "precision_dm": 0.9125541125541126,
498
+ "coverage_dm": 0.6888311688311688,
499
+ "pb_r_median": 0.8559480608909976,
500
+ "pb_top1": 0.025974025974025976,
501
+ "mono_pct_gen": 18.264935064935063,
502
+ "mono_pct_obs": 20.318176241847713,
503
+ "median_umi_gen": 2001.0,
504
+ "median_umi_obs": 1982.0,
505
+ "contrast_mean_cp10k_r_gen": 0.04964021194274032,
506
+ "contrast_pseudobulk_log1p_cpm_r_gen": 0.018138941169166548,
507
+ "contrast_mean_cp10k_r_broadcast": 0.2773746411939305,
508
+ "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.2726262416899252,
509
+ "deg_top50_T": 0,
510
+ "deg_top50_B": 2,
511
+ "deg_top50_Mono": 4,
512
+ "deg_top50_NK": 1,
513
+ "deg_top50_DC": 0,
514
+ "deg_top50_sum": 7,
515
+ "deg_top50_max": 250,
516
+ "deg_top50_sum_4type": 7,
517
+ "deg_top50_sum_broadcast": 15,
518
+ "seconds": 18.8
519
+ },
520
+ "scsemi": {
521
+ "comp_l1": 0.6168500613611326,
522
+ "comp_l1_obs_loo_null": 0.5181561061909782,
523
+ "precision": 0.6630303030303031,
524
+ "coverage": 0.08190476190476191,
525
+ "precision_dm": 0.42363636363636364,
526
+ "coverage_dm": 0.1618181818181818,
527
+ "pb_r_median": 0.5849720244107031,
528
+ "pb_top1": 0.012987012987012988,
529
+ "mono_pct_gen": 32.564502164502166,
530
+ "mono_pct_obs": 20.318176241847713,
531
+ "median_umi_gen": 1797.0,
532
+ "median_umi_obs": 1982.0,
533
+ "contrast_mean_cp10k_r_gen": 0.453002162271836,
534
+ "contrast_pseudobulk_log1p_cpm_r_gen": 0.1557750192027605,
535
+ "contrast_mean_cp10k_r_broadcast": 0.3195942137906433,
536
+ "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.2882391251218291,
537
+ "deg_top50_T": 2,
538
+ "deg_top50_B": 0,
539
+ "deg_top50_Mono": 0,
540
+ "deg_top50_NK": 0,
541
+ "deg_top50_DC": 0,
542
+ "deg_top50_sum": 2,
543
+ "deg_top50_max": 250,
544
+ "deg_top50_sum_4type": 2,
545
+ "deg_top50_sum_broadcast": 20,
546
+ "seconds": 17.1
547
+ },
548
+ "raw": {
549
+ "comp_l1": 0.49927818449009004,
550
+ "comp_l1_obs_loo_null": 0.5181561061909782,
551
+ "precision": 0.6367099567099567,
552
+ "coverage": 0.07515151515151515,
553
+ "precision_dm": 0.5984415584415584,
554
+ "coverage_dm": 0.07090909090909091,
555
+ "pb_r_median": 0.8783191820214302,
556
+ "pb_top1": 0.09090909090909091,
557
+ "mono_pct_gen": 35.62077922077922,
558
+ "mono_pct_obs": 20.318176241847713,
559
+ "median_umi_gen": 982.0,
560
+ "median_umi_obs": 1982.0,
561
+ "contrast_mean_cp10k_r_gen": -0.020973148970441904,
562
+ "contrast_pseudobulk_log1p_cpm_r_gen": 0.04559935882110163,
563
+ "contrast_mean_cp10k_r_broadcast": 0.3195942137906433,
564
+ "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.2882391251218291,
565
+ "deg_top50_T": 2,
566
+ "deg_top50_B": 1,
567
+ "deg_top50_Mono": 4,
568
+ "deg_top50_NK": 3,
569
+ "deg_top50_DC": 1,
570
+ "deg_top50_sum": 11,
571
+ "deg_top50_max": 250,
572
+ "deg_top50_sum_4type": 10,
573
+ "deg_top50_sum_broadcast": 20,
574
+ "seconds": 19.6
575
+ },
576
+ "refcal": {
577
+ "comp_l1": 0.4067762833138462,
578
+ "comp_l1_obs_loo_null": 0.5181561061909782,
579
+ "precision": 0.8290909090909091,
580
+ "coverage": 0.1870995670995671,
581
+ "precision_dm": 0.8045021645021645,
582
+ "coverage_dm": 0.37974025974025977,
583
+ "pb_r_median": 0.8479560271087334,
584
+ "pb_top1": 0.12987012987012986,
585
+ "mono_pct_gen": 26.87878787878788,
586
+ "mono_pct_obs": 20.318176241847713,
587
+ "median_umi_gen": 1557.0,
588
+ "median_umi_obs": 1982.0,
589
+ "contrast_mean_cp10k_r_gen": 0.14523507548470094,
590
+ "contrast_pseudobulk_log1p_cpm_r_gen": 0.14688783841366332,
591
+ "contrast_mean_cp10k_r_broadcast": 0.2421989933218182,
592
+ "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.2900426168490661,
593
+ "deg_top50_T": 3,
594
+ "deg_top50_B": 1,
595
+ "deg_top50_Mono": 5,
596
+ "deg_top50_NK": 0,
597
+ "deg_top50_DC": 0,
598
+ "deg_top50_sum": 9,
599
+ "deg_top50_max": 250,
600
+ "deg_top50_sum_4type": 9,
601
+ "deg_top50_sum_broadcast": 12,
602
+ "seconds": 18.7
603
+ }
604
+ },
605
+ "per_arm": {
606
+ "lora": {
607
+ "arm": "lora",
608
+ "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw4/lora.npz",
609
+ "npz_sha256": "ff3664fc3dfd1f5b4f4a51f48df70449513ee9e09110d3277f73bad8bdf70883",
610
+ "receipt_verified": true,
611
+ "generation": {
612
+ "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/ye2026_sepsis/disease/draw4/lora/checkpoint_ft.pt",
613
+ "checkpoint_sha256": "6534c18f28e1ce3e445a5d789495d37ddd1b0be12c2dfb0f1ad0ad9e81a02866",
614
+ "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw4/test_raw.npz",
615
+ "input_condition_sha256": "0c8c43a2f8217dfc290e4bcf0e819f9044a0bb39a30fe0a84b93603c2d65170e",
616
+ "seed": 20260928,
617
+ "steps": 50,
618
+ "support_readout": "bernoulli",
619
+ "weights": "ema"
620
+ },
621
+ "condition_for_broadcast": {
622
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw4/test_raw.npz",
623
+ "sha256": "0c8c43a2f8217dfc290e4bcf0e819f9044a0bb39a30fe0a84b93603c2d65170e"
624
+ },
625
+ "poisson": {
626
+ "seed": 20260916,
627
+ "rule": "whole NPZ, rows in NPZ order",
628
+ "nnz_whole_npz": 31526484,
629
+ "median_library_whole_npz_panel": 1570.0,
630
+ "n_rows_whole_npz": 115500
631
+ },
632
+ "annotation": {
633
+ "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
634
+ "zero_padded_model_genes": 0,
635
+ "label_counts": {
636
+ "T cell": 65174,
637
+ "Monocyte": 20309,
638
+ "B cell": 20196,
639
+ "NK cell": 4940,
640
+ "Other": 4338,
641
+ "DC": 543
642
+ },
643
+ "mean_l2_max_prob": 0.9186543578478423,
644
+ "predict_seconds": 4.1
645
+ },
646
+ "n_donors": 77,
647
+ "n_generated_cells": 115500,
648
+ "composition": {
649
+ "l1_mean": 0.390430034908782,
650
+ "l1_median": 0.3282795698924731,
651
+ "l1_obs_loo_null_mean": 0.5181561061909782,
652
+ "l1_generated_loo_mean_vs_observed_mean": 0.5119424033777898,
653
+ "composition_top1": 0.09090909090909091,
654
+ "mean_fraction_generated": {
655
+ "T cell": 0.564277,
656
+ "B cell": 0.174857,
657
+ "Monocyte": 0.175835,
658
+ "NK cell": 0.042771,
659
+ "DC": 0.004701,
660
+ "Other": 0.037558
661
+ },
662
+ "mean_fraction_observed": {
663
+ "T cell": 0.486896,
664
+ "B cell": 0.174321,
665
+ "Monocyte": 0.203182,
666
+ "NK cell": 0.082319,
667
+ "DC": 0.005509,
668
+ "Other": 0.047773
669
+ }
670
+ },
671
+ "pseudobulk": {
672
+ "n_genes": 5975,
673
+ "r_median": 0.885001251773162,
674
+ "r_mean": 0.8793300585654039,
675
+ "top1": 0.11688311688311688,
676
+ "n_top1": 9,
677
+ "own_rank_median": 9.0,
678
+ "chance_top1": 0.012987012987012988
679
+ },
680
+ "precision_coverage": {
681
+ "precision": 0.8816450216450217,
682
+ "coverage": 0.6935064935064935,
683
+ "density": 0.6371515151515151,
684
+ "n_query": 11550,
685
+ "n_reference": 11550
686
+ },
687
+ "precision_coverage_depth_matched": {
688
+ "precision": 0.8900432900432901,
689
+ "coverage": 0.8696103896103896,
690
+ "density": 0.9176883116883117,
691
+ "detected_median_before": {
692
+ "R1": 412.0,
693
+ "Q": 271.0
694
+ },
695
+ "detected_median_after": {
696
+ "R1": 270.0,
697
+ "Q": 270.0
698
+ }
699
+ },
700
+ "monocyte_pct": {
701
+ "generated_mean_over_donors": 17.583549783549785,
702
+ "observed_mean_over_donors": 20.318176241847713,
703
+ "generated_pooled_cells": 17.583549783549785
704
+ },
705
+ "median_umi_per_cell_scoring_genes": {
706
+ "generated_pooled": 1570.0,
707
+ "observed_pooled": 1982.0,
708
+ "generated_mean_of_donor_medians": 1612.56494140625,
709
+ "observed_mean_of_donor_medians": 2130.8636363636365
710
+ },
711
+ "contrast": {
712
+ "mean_cp10k": {
713
+ "per_type": {
714
+ "T cell": {
715
+ "r_generated": 0.6159775459983661,
716
+ "r_broadcast": 0.2635493097811775,
717
+ "partial_r_generated_given_broadcast": 0.5844485930495977,
718
+ "r_generated_vs_broadcast": 0.2898928883825978,
719
+ "n_genes": 3259
720
+ },
721
+ "B cell": {
722
+ "r_generated": 0.5877537943429672,
723
+ "r_broadcast": 0.2759123555261431,
724
+ "partial_r_generated_given_broadcast": 0.5593887849820384,
725
+ "r_generated_vs_broadcast": 0.23704307057992033,
726
+ "n_genes": 3311
727
+ },
728
+ "Monocyte": {
729
+ "r_generated": 0.35286900593345366,
730
+ "r_broadcast": 0.5497635656505115,
731
+ "partial_r_generated_given_broadcast": 0.29377180033914846,
732
+ "r_generated_vs_broadcast": 0.20497110223127338,
733
+ "n_genes": 3304
734
+ },
735
+ "NK cell": {
736
+ "r_generated": 0.3918886282124231,
737
+ "r_broadcast": 0.18915162420474085,
738
+ "partial_r_generated_given_broadcast": 0.3635290182795504,
739
+ "r_generated_vs_broadcast": 0.2395918653100643,
740
+ "n_genes": 3235
741
+ }
742
+ },
743
+ "mean_r_generated": 0.48712224362180245,
744
+ "mean_r_broadcast": 0.3195942137906433,
745
+ "mean_partial_r": 0.45028454916258376
746
+ },
747
+ "pseudobulk_log1p_cpm": {
748
+ "per_type": {
749
+ "T cell": {
750
+ "r_generated": 0.527458644785867,
751
+ "r_broadcast": 0.2326120649060939,
752
+ "partial_r_generated_given_broadcast": 0.502732132122252,
753
+ "r_generated_vs_broadcast": 0.21451586986455023,
754
+ "n_genes": 3259
755
+ },
756
+ "B cell": {
757
+ "r_generated": 0.45280338396002867,
758
+ "r_broadcast": 0.25121490410279235,
759
+ "partial_r_generated_given_broadcast": 0.4262197721712623,
760
+ "r_generated_vs_broadcast": 0.1902105814409645,
761
+ "n_genes": 3311
762
+ },
763
+ "Monocyte": {
764
+ "r_generated": 0.37386978704886886,
765
+ "r_broadcast": 0.6130579062755492,
766
+ "partial_r_generated_given_broadcast": 0.2906915552870954,
767
+ "r_generated_vs_broadcast": 0.24682497155278194,
768
+ "n_genes": 3304
769
+ },
770
+ "NK cell": {
771
+ "r_generated": 0.2571347088050475,
772
+ "r_broadcast": 0.05607162520288094,
773
+ "partial_r_generated_given_broadcast": 0.25235903451826147,
774
+ "r_generated_vs_broadcast": 0.13093993330706122,
775
+ "n_genes": 3235
776
+ }
777
+ },
778
+ "mean_r_generated": 0.402816631149953,
779
+ "mean_r_broadcast": 0.2882391251218291,
780
+ "mean_partial_r": 0.36800062352471774
781
+ }
782
+ },
783
+ "deg_top50": {
784
+ "types_scored": [
785
+ "T cell",
786
+ "B cell",
787
+ "Monocyte",
788
+ "NK cell",
789
+ "DC"
790
+ ],
791
+ "types_not_scored": {},
792
+ "per_type": {
793
+ "T cell": {
794
+ "deg_scored": true,
795
+ "top50_overlap": 6,
796
+ "top50_jaccard": 0.06382978723404255,
797
+ "obs_top_list_size": 50,
798
+ "gen_top_list_size": 50,
799
+ "top50_overlap_broadcast": 3,
800
+ "top50_jaccard_broadcast": 0.030927835051546393,
801
+ "n_cells_obs": 277774,
802
+ "n_cells_gen": 65174
803
+ },
804
+ "B cell": {
805
+ "deg_scored": true,
806
+ "top50_overlap": 6,
807
+ "top50_jaccard": 0.06382978723404255,
808
+ "obs_top_list_size": 50,
809
+ "gen_top_list_size": 50,
810
+ "top50_overlap_broadcast": 1,
811
+ "top50_jaccard_broadcast": 0.010101010101010102,
812
+ "n_cells_obs": 92596,
813
+ "n_cells_gen": 20196
814
+ },
815
+ "Monocyte": {
816
+ "deg_scored": true,
817
+ "top50_overlap": 3,
818
+ "top50_jaccard": 0.030927835051546393,
819
+ "obs_top_list_size": 50,
820
+ "gen_top_list_size": 50,
821
+ "top50_overlap_broadcast": 13,
822
+ "top50_jaccard_broadcast": 0.14942528735632185,
823
+ "n_cells_obs": 98968,
824
+ "n_cells_gen": 20309
825
+ },
826
+ "NK cell": {
827
+ "deg_scored": true,
828
+ "top50_overlap": 0,
829
+ "top50_jaccard": 0.0,
830
+ "obs_top_list_size": 50,
831
+ "gen_top_list_size": 12,
832
+ "top50_overlap_broadcast": 2,
833
+ "top50_jaccard_broadcast": 0.02040816326530612,
834
+ "n_cells_obs": 45385,
835
+ "n_cells_gen": 4940
836
+ },
837
+ "DC": {
838
+ "deg_scored": true,
839
+ "top50_overlap": 0,
840
+ "top50_jaccard": 0.0,
841
+ "obs_top_list_size": 50,
842
+ "gen_top_list_size": 34,
843
+ "top50_overlap_broadcast": 1,
844
+ "top50_jaccard_broadcast": 0.010101010101010102,
845
+ "n_cells_obs": 3031,
846
+ "n_cells_gen": 543
847
+ }
848
+ },
849
+ "sum": 15,
850
+ "sum_4type": 15,
851
+ "max": 250,
852
+ "mean": 3.0,
853
+ "sum_broadcast": 20,
854
+ "sum_broadcast_4type": 19,
855
+ "broadcast_n_significant": 1128,
856
+ "seconds": 0.21
857
+ },
858
+ "seconds": 18.2
859
+ },
860
+ "pairedcal": {
861
+ "arm": "pairedcal",
862
+ "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw4/pairedcal.npz",
863
+ "npz_sha256": "95a502bad6ff9efd4247114467eba0875f08094865028a6b322c01f33a5c478a",
864
+ "receipt_verified": true,
865
+ "generation": {
866
+ "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
867
+ "checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
868
+ "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw4/test_cal.npz",
869
+ "input_condition_sha256": "b5d28934f32ef6a5b9899133dd9aa8ffea2905f0363dbe537d7c3dcc51cb1405",
870
+ "seed": 20260928,
871
+ "steps": 50,
872
+ "support_readout": "bernoulli",
873
+ "weights": "ema"
874
+ },
875
+ "condition_for_broadcast": {
876
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis/disease/draw4/test_cal.npz",
877
+ "sha256": "b5d28934f32ef6a5b9899133dd9aa8ffea2905f0363dbe537d7c3dcc51cb1405"
878
+ },
879
+ "poisson": {
880
+ "seed": 20260916,
881
+ "rule": "whole NPZ, rows in NPZ order",
882
+ "nnz_whole_npz": 30950336,
883
+ "median_library_whole_npz_panel": 2001.0,
884
+ "n_rows_whole_npz": 115500
885
+ },
886
+ "annotation": {
887
+ "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
888
+ "zero_padded_model_genes": 0,
889
+ "label_counts": {
890
+ "T cell": 62395,
891
+ "B cell": 22532,
892
+ "Monocyte": 21096,
893
+ "NK cell": 5925,
894
+ "Other": 2322,
895
+ "DC": 1230
896
+ },
897
+ "mean_l2_max_prob": 0.926830065709559,
898
+ "predict_seconds": 4.8
899
+ },
900
+ "n_donors": 77,
901
+ "n_generated_cells": 115500,
902
+ "composition": {
903
+ "l1_mean": 0.41979307710497205,
904
+ "l1_median": 0.4011561727668589,
905
+ "l1_obs_loo_null_mean": 0.5181561061909782,
906
+ "l1_generated_loo_mean_vs_observed_mean": 0.5204079902016343,
907
+ "composition_top1": 0.012987012987012988,
908
+ "mean_fraction_generated": {
909
+ "T cell": 0.540216,
910
+ "B cell": 0.195082,
911
+ "Monocyte": 0.182649,
912
+ "NK cell": 0.051299,
913
+ "DC": 0.010649,
914
+ "Other": 0.020104
915
+ },
916
+ "mean_fraction_observed": {
917
+ "T cell": 0.486896,
918
+ "B cell": 0.174321,
919
+ "Monocyte": 0.203182,
920
+ "NK cell": 0.082319,
921
+ "DC": 0.005509,
922
+ "Other": 0.047773
923
+ }
924
+ },
925
+ "pseudobulk": {
926
+ "n_genes": 5975,
927
+ "r_median": 0.8559480608909976,
928
+ "r_mean": 0.8533139889716622,
929
+ "top1": 0.025974025974025976,
930
+ "n_top1": 2,
931
+ "own_rank_median": 10.0,
932
+ "chance_top1": 0.012987012987012988
933
+ },
934
+ "precision_coverage": {
935
+ "precision": 0.8936796536796536,
936
+ "coverage": 0.4442424242424242,
937
+ "density": 0.5188398268398269,
938
+ "n_query": 11550,
939
+ "n_reference": 11550
940
+ },
941
+ "precision_coverage_depth_matched": {
942
+ "precision": 0.9125541125541126,
943
+ "coverage": 0.6888311688311688,
944
+ "density": 0.8171428571428571,
945
+ "detected_median_before": {
946
+ "R1": 412.0,
947
+ "Q": 262.0
948
+ },
949
+ "detected_median_after": {
950
+ "R1": 262.0,
951
+ "Q": 262.0
952
+ }
953
+ },
954
+ "monocyte_pct": {
955
+ "generated_mean_over_donors": 18.264935064935063,
956
+ "observed_mean_over_donors": 20.318176241847713,
957
+ "generated_pooled_cells": 18.264935064935063
958
+ },
959
+ "median_umi_per_cell_scoring_genes": {
960
+ "generated_pooled": 2001.0,
961
+ "observed_pooled": 1982.0,
962
+ "generated_mean_of_donor_medians": 2026.1103515625,
963
+ "observed_mean_of_donor_medians": 2130.8636363636365
964
+ },
965
+ "contrast": {
966
+ "mean_cp10k": {
967
+ "per_type": {
968
+ "T cell": {
969
+ "r_generated": -0.004387813654592628,
970
+ "r_broadcast": 0.20230387971044797,
971
+ "partial_r_generated_given_broadcast": -0.0923344121265372,
972
+ "r_generated_vs_broadcast": 0.38991078849943306,
973
+ "n_genes": 3259
974
+ },
975
+ "B cell": {
976
+ "r_generated": 0.11343951002768259,
977
+ "r_broadcast": 0.2492078152810009,
978
+ "partial_r_generated_given_broadcast": 0.037001860374259475,
979
+ "r_generated_vs_broadcast": 0.3189154338403706,
980
+ "n_genes": 3311
981
+ },
982
+ "Monocyte": {
983
+ "r_generated": 0.14883991658020554,
984
+ "r_broadcast": 0.5439492619115716,
985
+ "partial_r_generated_given_broadcast": 0.004201395287732596,
986
+ "r_generated_vs_broadcast": 0.2673830465705913,
987
+ "n_genes": 3304
988
+ },
989
+ "NK cell": {
990
+ "r_generated": -0.059330765182334225,
991
+ "r_broadcast": 0.11403760787270158,
992
+ "partial_r_generated_given_broadcast": -0.10097086454584024,
993
+ "r_generated_vs_broadcast": 0.3146798467448154,
994
+ "n_genes": 3235
995
+ }
996
+ },
997
+ "mean_r_generated": 0.04964021194274032,
998
+ "mean_r_broadcast": 0.2773746411939305,
999
+ "mean_partial_r": -0.03802550525259634
1000
+ },
1001
+ "pseudobulk_log1p_cpm": {
1002
+ "per_type": {
1003
+ "T cell": {
1004
+ "r_generated": 0.019420385120568085,
1005
+ "r_broadcast": 0.21789104285409847,
1006
+ "partial_r_generated_given_broadcast": -0.08758268126993234,
1007
+ "r_generated_vs_broadcast": 0.441184120618863,
1008
+ "n_genes": 3259
1009
+ },
1010
+ "B cell": {
1011
+ "r_generated": 0.125795642060809,
1012
+ "r_broadcast": 0.23964186611767324,
1013
+ "partial_r_generated_given_broadcast": 0.06032242913582503,
1014
+ "r_generated_vs_broadcast": 0.2911336448509976,
1015
+ "n_genes": 3311
1016
+ },
1017
+ "Monocyte": {
1018
+ "r_generated": 0.05451052741926926,
1019
+ "r_broadcast": 0.5948701120463975,
1020
+ "partial_r_generated_given_broadcast": -0.16345133195558095,
1021
+ "r_generated_vs_broadcast": 0.30217412365593455,
1022
+ "n_genes": 3304
1023
+ },
1024
+ "NK cell": {
1025
+ "r_generated": -0.12717078992398018,
1026
+ "r_broadcast": 0.03810194574153175,
1027
+ "partial_r_generated_given_broadcast": -0.13962920267946333,
1028
+ "r_generated_vs_broadcast": 0.2279261511526424,
1029
+ "n_genes": 3235
1030
+ }
1031
+ },
1032
+ "mean_r_generated": 0.018138941169166548,
1033
+ "mean_r_broadcast": 0.2726262416899252,
1034
+ "mean_partial_r": -0.0825851966922879
1035
+ }
1036
+ },
1037
+ "deg_top50": {
1038
+ "types_scored": [
1039
+ "T cell",
1040
+ "B cell",
1041
+ "Monocyte",
1042
+ "NK cell",
1043
+ "DC"
1044
+ ],
1045
+ "types_not_scored": {},
1046
+ "per_type": {
1047
+ "T cell": {
1048
+ "deg_scored": true,
1049
+ "top50_overlap": 0,
1050
+ "top50_jaccard": 0.0,
1051
+ "obs_top_list_size": 50,
1052
+ "gen_top_list_size": 50,
1053
+ "top50_overlap_broadcast": 1,
1054
+ "top50_jaccard_broadcast": 0.010101010101010102,
1055
+ "n_cells_obs": 277774,
1056
+ "n_cells_gen": 62395
1057
+ },
1058
+ "B cell": {
1059
+ "deg_scored": true,
1060
+ "top50_overlap": 2,
1061
+ "top50_jaccard": 0.02040816326530612,
1062
+ "obs_top_list_size": 50,
1063
+ "gen_top_list_size": 50,
1064
+ "top50_overlap_broadcast": 1,
1065
+ "top50_jaccard_broadcast": 0.010101010101010102,
1066
+ "n_cells_obs": 92596,
1067
+ "n_cells_gen": 22532
1068
+ },
1069
+ "Monocyte": {
1070
+ "deg_scored": true,
1071
+ "top50_overlap": 4,
1072
+ "top50_jaccard": 0.041666666666666664,
1073
+ "obs_top_list_size": 50,
1074
+ "gen_top_list_size": 50,
1075
+ "top50_overlap_broadcast": 11,
1076
+ "top50_jaccard_broadcast": 0.12359550561797752,
1077
+ "n_cells_obs": 98968,
1078
+ "n_cells_gen": 21096
1079
+ },
1080
+ "NK cell": {
1081
+ "deg_scored": true,
1082
+ "top50_overlap": 1,
1083
+ "top50_jaccard": 0.011627906976744186,
1084
+ "obs_top_list_size": 50,
1085
+ "gen_top_list_size": 37,
1086
+ "top50_overlap_broadcast": 1,
1087
+ "top50_jaccard_broadcast": 0.010101010101010102,
1088
+ "n_cells_obs": 45385,
1089
+ "n_cells_gen": 5925
1090
+ },
1091
+ "DC": {
1092
+ "deg_scored": true,
1093
+ "top50_overlap": 0,
1094
+ "top50_jaccard": 0.0,
1095
+ "obs_top_list_size": 50,
1096
+ "gen_top_list_size": 2,
1097
+ "top50_overlap_broadcast": 1,
1098
+ "top50_jaccard_broadcast": 0.010101010101010102,
1099
+ "n_cells_obs": 3031,
1100
+ "n_cells_gen": 1230
1101
+ }
1102
+ },
1103
+ "sum": 7,
1104
+ "sum_4type": 7,
1105
+ "max": 250,
1106
+ "mean": 1.4,
1107
+ "sum_broadcast": 15,
1108
+ "sum_broadcast_4type": 14,
1109
+ "broadcast_n_significant": 807,
1110
+ "seconds": 0.21
1111
+ },
1112
+ "seconds": 18.8
1113
+ },
1114
+ "scsemi": {
1115
+ "arm": "scsemi",
1116
+ "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw4/scsemi.npz",
1117
+ "npz_sha256": "15416b96afcabe3ed0f42d3c75eaa85a1bf14844b5bc2e2ec781dce7ce455619",
1118
+ "receipt_verified": true,
1119
+ "generation": {
1120
+ "checkpoint": null,
1121
+ "checkpoint_sha256": null,
1122
+ "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/fewshot_n5/draw4/test_raw.npz",
1123
+ "input_condition_sha256": "0c8c43a2f8217dfc290e4bcf0e819f9044a0bb39a30fe0a84b93603c2d65170e",
1124
+ "seed": 20260927,
1125
+ "steps": null,
1126
+ "support_readout": "upstream (values <= 10 normalized units zeroed by fast_semi)",
1127
+ "weights": null
1128
+ },
1129
+ "condition_for_broadcast": {
1130
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/fewshot_n5/draw4/test_raw.npz",
1131
+ "sha256": "0c8c43a2f8217dfc290e4bcf0e819f9044a0bb39a30fe0a84b93603c2d65170e"
1132
+ },
1133
+ "poisson": {
1134
+ "seed": 20260916,
1135
+ "rule": "whole NPZ, rows in NPZ order",
1136
+ "nnz_whole_npz": 13631640,
1137
+ "median_library_whole_npz_panel": 1797.0,
1138
+ "n_rows_whole_npz": 115500
1139
+ },
1140
+ "annotation": {
1141
+ "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
1142
+ "zero_padded_model_genes": 0,
1143
+ "label_counts": {
1144
+ "T cell": 53597,
1145
+ "Monocyte": 37612,
1146
+ "B cell": 11156,
1147
+ "Other": 7064,
1148
+ "DC": 3383,
1149
+ "NK cell": 2688
1150
+ },
1151
+ "mean_l2_max_prob": 0.9101160208059079,
1152
+ "predict_seconds": 4.8
1153
+ },
1154
+ "n_donors": 77,
1155
+ "n_generated_cells": 115500,
1156
+ "composition": {
1157
+ "l1_mean": 0.6168500613611326,
1158
+ "l1_median": 0.5499363729271749,
1159
+ "l1_obs_loo_null_mean": 0.5181561061909782,
1160
+ "l1_generated_loo_mean_vs_observed_mean": 0.5840445612160191,
1161
+ "composition_top1": 0.03896103896103896,
1162
+ "mean_fraction_generated": {
1163
+ "T cell": 0.464043,
1164
+ "B cell": 0.096589,
1165
+ "Monocyte": 0.325645,
1166
+ "NK cell": 0.023273,
1167
+ "DC": 0.02929,
1168
+ "Other": 0.06116
1169
+ },
1170
+ "mean_fraction_observed": {
1171
+ "T cell": 0.486896,
1172
+ "B cell": 0.174321,
1173
+ "Monocyte": 0.203182,
1174
+ "NK cell": 0.082319,
1175
+ "DC": 0.005509,
1176
+ "Other": 0.047773
1177
+ }
1178
+ },
1179
+ "pseudobulk": {
1180
+ "n_genes": 5975,
1181
+ "r_median": 0.5849720244107031,
1182
+ "r_mean": 0.5841553662801338,
1183
+ "top1": 0.012987012987012988,
1184
+ "n_top1": 1,
1185
+ "own_rank_median": 26.0,
1186
+ "chance_top1": 0.012987012987012988
1187
+ },
1188
+ "precision_coverage": {
1189
+ "precision": 0.6630303030303031,
1190
+ "coverage": 0.08190476190476191,
1191
+ "density": 0.17412987012987013,
1192
+ "n_query": 11550,
1193
+ "n_reference": 11550
1194
+ },
1195
+ "precision_coverage_depth_matched": {
1196
+ "precision": 0.42363636363636364,
1197
+ "coverage": 0.1618181818181818,
1198
+ "density": 0.12026839826839826,
1199
+ "detected_median_before": {
1200
+ "R1": 412.0,
1201
+ "Q": 117.0
1202
+ },
1203
+ "detected_median_after": {
1204
+ "R1": 117.0,
1205
+ "Q": 117.0
1206
+ }
1207
+ },
1208
+ "monocyte_pct": {
1209
+ "generated_mean_over_donors": 32.564502164502166,
1210
+ "observed_mean_over_donors": 20.318176241847713,
1211
+ "generated_pooled_cells": 32.564502164502166
1212
+ },
1213
+ "median_umi_per_cell_scoring_genes": {
1214
+ "generated_pooled": 1797.0,
1215
+ "observed_pooled": 1982.0,
1216
+ "generated_mean_of_donor_medians": 1796.727294921875,
1217
+ "observed_mean_of_donor_medians": 2130.8636363636365
1218
+ },
1219
+ "contrast": {
1220
+ "mean_cp10k": {
1221
+ "per_type": {
1222
+ "T cell": {
1223
+ "r_generated": 0.42462090347305576,
1224
+ "r_broadcast": 0.2635493097811775,
1225
+ "partial_r_generated_given_broadcast": 0.3486544124480115,
1226
+ "r_generated_vs_broadcast": 0.5251419606939168,
1227
+ "n_genes": 3259
1228
+ },
1229
+ "B cell": {
1230
+ "r_generated": 0.4425788280300799,
1231
+ "r_broadcast": 0.2759123555261431,
1232
+ "partial_r_generated_given_broadcast": 0.36460885815571925,
1233
+ "r_generated_vs_broadcast": 0.5161798816406824,
1234
+ "n_genes": 3311
1235
+ },
1236
+ "Monocyte": {
1237
+ "r_generated": 0.44937324039359416,
1238
+ "r_broadcast": 0.5497635656505115,
1239
+ "partial_r_generated_given_broadcast": 0.24194544043578112,
1240
+ "r_generated_vs_broadcast": 0.49876761556354693,
1241
+ "n_genes": 3304
1242
+ },
1243
+ "NK cell": {
1244
+ "r_generated": 0.4954356771906141,
1245
+ "r_broadcast": 0.18915162420474085,
1246
+ "partial_r_generated_given_broadcast": 0.46663868491449495,
1247
+ "r_generated_vs_broadcast": 0.4127005161645233,
1248
+ "n_genes": 3235
1249
+ }
1250
+ },
1251
+ "mean_r_generated": 0.453002162271836,
1252
+ "mean_r_broadcast": 0.3195942137906433,
1253
+ "mean_partial_r": 0.3554618489885017
1254
+ },
1255
+ "pseudobulk_log1p_cpm": {
1256
+ "per_type": {
1257
+ "T cell": {
1258
+ "r_generated": 0.18092161814376057,
1259
+ "r_broadcast": 0.2326120649060939,
1260
+ "partial_r_generated_given_broadcast": 0.11895722401352994,
1261
+ "r_generated_vs_broadcast": 0.3039434897568695,
1262
+ "n_genes": 3259
1263
+ },
1264
+ "B cell": {
1265
+ "r_generated": 0.14787985734968617,
1266
+ "r_broadcast": 0.25121490410279235,
1267
+ "partial_r_generated_given_broadcast": 0.08907963621791537,
1268
+ "r_generated_vs_broadcast": 0.2569595435142086,
1269
+ "n_genes": 3311
1270
+ },
1271
+ "Monocyte": {
1272
+ "r_generated": 0.11744297797785887,
1273
+ "r_broadcast": 0.6130579062755492,
1274
+ "partial_r_generated_given_broadcast": -0.10215337971736418,
1275
+ "r_generated_vs_broadcast": 0.3164474298064529,
1276
+ "n_genes": 3304
1277
+ },
1278
+ "NK cell": {
1279
+ "r_generated": 0.17685562333973642,
1280
+ "r_broadcast": 0.05607162520288094,
1281
+ "partial_r_generated_given_broadcast": 0.1701407750883899,
1282
+ "r_generated_vs_broadcast": 0.16715050894177844,
1283
+ "n_genes": 3235
1284
+ }
1285
+ },
1286
+ "mean_r_generated": 0.1557750192027605,
1287
+ "mean_r_broadcast": 0.2882391251218291,
1288
+ "mean_partial_r": 0.06900606390061775
1289
+ }
1290
+ },
1291
+ "deg_top50": {
1292
+ "types_scored": [
1293
+ "T cell",
1294
+ "B cell",
1295
+ "Monocyte",
1296
+ "NK cell",
1297
+ "DC"
1298
+ ],
1299
+ "types_not_scored": {},
1300
+ "per_type": {
1301
+ "T cell": {
1302
+ "deg_scored": true,
1303
+ "top50_overlap": 2,
1304
+ "top50_jaccard": 0.031746031746031744,
1305
+ "obs_top_list_size": 50,
1306
+ "gen_top_list_size": 15,
1307
+ "top50_overlap_broadcast": 3,
1308
+ "top50_jaccard_broadcast": 0.030927835051546393,
1309
+ "n_cells_obs": 277774,
1310
+ "n_cells_gen": 53597
1311
+ },
1312
+ "B cell": {
1313
+ "deg_scored": true,
1314
+ "top50_overlap": 0,
1315
+ "top50_jaccard": 0.0,
1316
+ "obs_top_list_size": 50,
1317
+ "gen_top_list_size": 23,
1318
+ "top50_overlap_broadcast": 1,
1319
+ "top50_jaccard_broadcast": 0.010101010101010102,
1320
+ "n_cells_obs": 92596,
1321
+ "n_cells_gen": 11156
1322
+ },
1323
+ "Monocyte": {
1324
+ "deg_scored": true,
1325
+ "top50_overlap": 0,
1326
+ "top50_jaccard": 0.0,
1327
+ "obs_top_list_size": 50,
1328
+ "gen_top_list_size": 0,
1329
+ "top50_overlap_broadcast": 13,
1330
+ "top50_jaccard_broadcast": 0.14942528735632185,
1331
+ "n_cells_obs": 98968,
1332
+ "n_cells_gen": 37612
1333
+ },
1334
+ "NK cell": {
1335
+ "deg_scored": true,
1336
+ "top50_overlap": 0,
1337
+ "top50_jaccard": 0.0,
1338
+ "obs_top_list_size": 50,
1339
+ "gen_top_list_size": 8,
1340
+ "top50_overlap_broadcast": 2,
1341
+ "top50_jaccard_broadcast": 0.02040816326530612,
1342
+ "n_cells_obs": 45385,
1343
+ "n_cells_gen": 2688
1344
+ },
1345
+ "DC": {
1346
+ "deg_scored": true,
1347
+ "top50_overlap": 0,
1348
+ "top50_jaccard": 0.0,
1349
+ "obs_top_list_size": 50,
1350
+ "gen_top_list_size": 16,
1351
+ "top50_overlap_broadcast": 1,
1352
+ "top50_jaccard_broadcast": 0.010101010101010102,
1353
+ "n_cells_obs": 3031,
1354
+ "n_cells_gen": 3383
1355
+ }
1356
+ },
1357
+ "sum": 2,
1358
+ "sum_4type": 2,
1359
+ "max": 250,
1360
+ "mean": 0.4,
1361
+ "sum_broadcast": 20,
1362
+ "sum_broadcast_4type": 19,
1363
+ "broadcast_n_significant": 1128,
1364
+ "seconds": 0.11
1365
+ },
1366
+ "seconds": 17.1
1367
+ },
1368
+ "raw": {
1369
+ "arm": "raw",
1370
+ "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/raw.npz",
1371
+ "npz_sha256": "665afa80f7749e56ee7a1c60d8452bff22a53e7bfcf87254c8e92d4d79c62b2a",
1372
+ "receipt_verified": true,
1373
+ "generation": {
1374
+ "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
1375
+ "checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
1376
+ "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_raw.npz",
1377
+ "input_condition_sha256": "36add186da47d10c067d7a1f0641fabf3ddba64d5e65168c5975e1e3a448c9cd",
1378
+ "seed": 20260928,
1379
+ "steps": 50,
1380
+ "support_readout": "bernoulli",
1381
+ "weights": "ema"
1382
+ },
1383
+ "condition_for_broadcast": {
1384
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_raw.npz",
1385
+ "sha256": "36add186da47d10c067d7a1f0641fabf3ddba64d5e65168c5975e1e3a448c9cd"
1386
+ },
1387
+ "poisson": {
1388
+ "seed": 20260916,
1389
+ "rule": "whole NPZ, rows in NPZ order",
1390
+ "nnz_whole_npz": 41805561,
1391
+ "median_library_whole_npz_panel": 980.0,
1392
+ "n_rows_whole_npz": 123000
1393
+ },
1394
+ "annotation": {
1395
+ "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
1396
+ "zero_padded_model_genes": 0,
1397
+ "label_counts": {
1398
+ "T cell": 41861,
1399
+ "Monocyte": 41142,
1400
+ "B cell": 17825,
1401
+ "NK cell": 10704,
1402
+ "Other": 2885,
1403
+ "DC": 1083
1404
+ },
1405
+ "mean_l2_max_prob": 0.9336786885313142,
1406
+ "predict_seconds": 3.8
1407
+ },
1408
+ "n_donors": 77,
1409
+ "n_generated_cells": 115500,
1410
+ "composition": {
1411
+ "l1_mean": 0.49927818449009004,
1412
+ "l1_median": 0.4241627722142744,
1413
+ "l1_obs_loo_null_mean": 0.5181561061909782,
1414
+ "l1_generated_loo_mean_vs_observed_mean": 0.5970408235103434,
1415
+ "composition_top1": 0.06493506493506493,
1416
+ "mean_fraction_generated": {
1417
+ "T cell": 0.362433,
1418
+ "B cell": 0.154329,
1419
+ "Monocyte": 0.356208,
1420
+ "NK cell": 0.092675,
1421
+ "DC": 0.009377,
1422
+ "Other": 0.024978
1423
+ },
1424
+ "mean_fraction_observed": {
1425
+ "T cell": 0.486896,
1426
+ "B cell": 0.174321,
1427
+ "Monocyte": 0.203182,
1428
+ "NK cell": 0.082319,
1429
+ "DC": 0.005509,
1430
+ "Other": 0.047773
1431
+ }
1432
+ },
1433
+ "pseudobulk": {
1434
+ "n_genes": 5975,
1435
+ "r_median": 0.8783191820214302,
1436
+ "r_mean": 0.8706025123036503,
1437
+ "top1": 0.09090909090909091,
1438
+ "n_top1": 7,
1439
+ "own_rank_median": 16.0,
1440
+ "chance_top1": 0.012987012987012988
1441
+ },
1442
+ "precision_coverage": {
1443
+ "precision": 0.6367099567099567,
1444
+ "coverage": 0.07515151515151515,
1445
+ "density": 0.23293506493506494,
1446
+ "n_query": 11550,
1447
+ "n_reference": 11550
1448
+ },
1449
+ "precision_coverage_depth_matched": {
1450
+ "precision": 0.5984415584415584,
1451
+ "coverage": 0.07090909090909091,
1452
+ "density": 0.19512554112554112,
1453
+ "detected_median_before": {
1454
+ "R1": 412.0,
1455
+ "Q": 337.0
1456
+ },
1457
+ "detected_median_after": {
1458
+ "R1": 330.0,
1459
+ "Q": 330.0
1460
+ }
1461
+ },
1462
+ "monocyte_pct": {
1463
+ "generated_mean_over_donors": 35.62077922077922,
1464
+ "observed_mean_over_donors": 20.318176241847713,
1465
+ "generated_pooled_cells": 35.62077922077922
1466
+ },
1467
+ "median_umi_per_cell_scoring_genes": {
1468
+ "generated_pooled": 982.0,
1469
+ "observed_pooled": 1982.0,
1470
+ "generated_mean_of_donor_medians": 1046.4415283203125,
1471
+ "observed_mean_of_donor_medians": 2130.8636363636365
1472
+ },
1473
+ "contrast": {
1474
+ "mean_cp10k": {
1475
+ "per_type": {
1476
+ "T cell": {
1477
+ "r_generated": -0.09673940435641143,
1478
+ "r_broadcast": 0.2635493097811775,
1479
+ "partial_r_generated_given_broadcast": -0.1720719347290031,
1480
+ "r_generated_vs_broadcast": 0.24375790649397974,
1481
+ "n_genes": 3259
1482
+ },
1483
+ "B cell": {
1484
+ "r_generated": 0.040350445805130586,
1485
+ "r_broadcast": 0.2759123555261431,
1486
+ "partial_r_generated_given_broadcast": -0.020220783055162086,
1487
+ "r_generated_vs_broadcast": 0.2150379452150194,
1488
+ "n_genes": 3311
1489
+ },
1490
+ "Monocyte": {
1491
+ "r_generated": 0.056609513839061744,
1492
+ "r_broadcast": 0.5497635656505115,
1493
+ "partial_r_generated_given_broadcast": -0.07813235465455806,
1494
+ "r_generated_vs_broadcast": 0.2188095438513894,
1495
+ "n_genes": 3304
1496
+ },
1497
+ "NK cell": {
1498
+ "r_generated": -0.08411315116954851,
1499
+ "r_broadcast": 0.18915162420474085,
1500
+ "partial_r_generated_given_broadcast": -0.14607915688598408,
1501
+ "r_generated_vs_broadcast": 0.28271973800782674,
1502
+ "n_genes": 3235
1503
+ }
1504
+ },
1505
+ "mean_r_generated": -0.020973148970441904,
1506
+ "mean_r_broadcast": 0.3195942137906433,
1507
+ "mean_partial_r": -0.10412605733117683
1508
+ },
1509
+ "pseudobulk_log1p_cpm": {
1510
+ "per_type": {
1511
+ "T cell": {
1512
+ "r_generated": -0.018804919867364617,
1513
+ "r_broadcast": 0.2326120649060939,
1514
+ "partial_r_generated_given_broadcast": -0.08949383951573882,
1515
+ "r_generated_vs_broadcast": 0.2785310921892013,
1516
+ "n_genes": 3259
1517
+ },
1518
+ "B cell": {
1519
+ "r_generated": 0.06732687761478687,
1520
+ "r_broadcast": 0.25121490410279235,
1521
+ "partial_r_generated_given_broadcast": 0.012993935226991176,
1522
+ "r_generated_vs_broadcast": 0.21915657068587874,
1523
+ "n_genes": 3311
1524
+ },
1525
+ "Monocyte": {
1526
+ "r_generated": 0.19287068411248884,
1527
+ "r_broadcast": 0.6130579062755492,
1528
+ "partial_r_generated_given_broadcast": -0.04531684449962794,
1529
+ "r_generated_vs_broadcast": 0.368884856511904,
1530
+ "n_genes": 3304
1531
+ },
1532
+ "NK cell": {
1533
+ "r_generated": -0.05899520657550458,
1534
+ "r_broadcast": 0.05607162520288094,
1535
+ "partial_r_generated_given_broadcast": -0.0779476323756633,
1536
+ "r_generated_vs_broadcast": 0.2802124842608202,
1537
+ "n_genes": 3235
1538
+ }
1539
+ },
1540
+ "mean_r_generated": 0.04559935882110163,
1541
+ "mean_r_broadcast": 0.2882391251218291,
1542
+ "mean_partial_r": -0.04994109529100972
1543
+ }
1544
+ },
1545
+ "deg_top50": {
1546
+ "types_scored": [
1547
+ "T cell",
1548
+ "B cell",
1549
+ "Monocyte",
1550
+ "NK cell",
1551
+ "DC"
1552
+ ],
1553
+ "types_not_scored": {},
1554
+ "per_type": {
1555
+ "T cell": {
1556
+ "deg_scored": true,
1557
+ "top50_overlap": 2,
1558
+ "top50_jaccard": 0.02040816326530612,
1559
+ "obs_top_list_size": 50,
1560
+ "gen_top_list_size": 50,
1561
+ "top50_overlap_broadcast": 3,
1562
+ "top50_jaccard_broadcast": 0.030927835051546393,
1563
+ "n_cells_obs": 277774,
1564
+ "n_cells_gen": 41861
1565
+ },
1566
+ "B cell": {
1567
+ "deg_scored": true,
1568
+ "top50_overlap": 1,
1569
+ "top50_jaccard": 0.010101010101010102,
1570
+ "obs_top_list_size": 50,
1571
+ "gen_top_list_size": 50,
1572
+ "top50_overlap_broadcast": 1,
1573
+ "top50_jaccard_broadcast": 0.010101010101010102,
1574
+ "n_cells_obs": 92596,
1575
+ "n_cells_gen": 17825
1576
+ },
1577
+ "Monocyte": {
1578
+ "deg_scored": true,
1579
+ "top50_overlap": 4,
1580
+ "top50_jaccard": 0.041666666666666664,
1581
+ "obs_top_list_size": 50,
1582
+ "gen_top_list_size": 50,
1583
+ "top50_overlap_broadcast": 13,
1584
+ "top50_jaccard_broadcast": 0.14942528735632185,
1585
+ "n_cells_obs": 98968,
1586
+ "n_cells_gen": 41142
1587
+ },
1588
+ "NK cell": {
1589
+ "deg_scored": true,
1590
+ "top50_overlap": 3,
1591
+ "top50_jaccard": 0.030927835051546393,
1592
+ "obs_top_list_size": 50,
1593
+ "gen_top_list_size": 50,
1594
+ "top50_overlap_broadcast": 2,
1595
+ "top50_jaccard_broadcast": 0.02040816326530612,
1596
+ "n_cells_obs": 45385,
1597
+ "n_cells_gen": 10704
1598
+ },
1599
+ "DC": {
1600
+ "deg_scored": true,
1601
+ "top50_overlap": 1,
1602
+ "top50_jaccard": 0.014705882352941176,
1603
+ "obs_top_list_size": 50,
1604
+ "gen_top_list_size": 19,
1605
+ "top50_overlap_broadcast": 1,
1606
+ "top50_jaccard_broadcast": 0.010101010101010102,
1607
+ "n_cells_obs": 3031,
1608
+ "n_cells_gen": 1083
1609
+ }
1610
+ },
1611
+ "sum": 11,
1612
+ "sum_4type": 10,
1613
+ "max": 250,
1614
+ "mean": 2.2,
1615
+ "sum_broadcast": 20,
1616
+ "sum_broadcast_4type": 19,
1617
+ "broadcast_n_significant": 1128,
1618
+ "seconds": 0.25
1619
+ },
1620
+ "seconds": 19.6
1621
+ },
1622
+ "refcal": {
1623
+ "arm": "refcal",
1624
+ "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/refcal.npz",
1625
+ "npz_sha256": "64784052e0289e347e2799523b4aa4ab07b16ddba6a54353a6011d9e77852891",
1626
+ "receipt_verified": true,
1627
+ "generation": {
1628
+ "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
1629
+ "checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
1630
+ "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_refcal.npz",
1631
+ "input_condition_sha256": "3886924bfe4926914677850db7dac8a77a38bb0c0fc1a30ee663b2587eabc7dd",
1632
+ "seed": 20260928,
1633
+ "steps": 50,
1634
+ "support_readout": "bernoulli",
1635
+ "weights": "ema"
1636
+ },
1637
+ "condition_for_broadcast": {
1638
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_refcal.npz",
1639
+ "sha256": "3886924bfe4926914677850db7dac8a77a38bb0c0fc1a30ee663b2587eabc7dd"
1640
+ },
1641
+ "poisson": {
1642
+ "seed": 20260916,
1643
+ "rule": "whole NPZ, rows in NPZ order",
1644
+ "nnz_whole_npz": 28973583,
1645
+ "median_library_whole_npz_panel": 1551.0,
1646
+ "n_rows_whole_npz": 123000
1647
+ },
1648
+ "annotation": {
1649
+ "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
1650
+ "zero_padded_model_genes": 0,
1651
+ "label_counts": {
1652
+ "T cell": 59331,
1653
+ "Monocyte": 31045,
1654
+ "B cell": 12700,
1655
+ "NK cell": 6621,
1656
+ "Other": 4395,
1657
+ "DC": 1408
1658
+ },
1659
+ "mean_l2_max_prob": 0.9364476537695436,
1660
+ "predict_seconds": 4.6
1661
+ },
1662
+ "n_donors": 77,
1663
+ "n_generated_cells": 115500,
1664
+ "composition": {
1665
+ "l1_mean": 0.4067762833138462,
1666
+ "l1_median": 0.3278308345424257,
1667
+ "l1_obs_loo_null_mean": 0.5181561061909782,
1668
+ "l1_generated_loo_mean_vs_observed_mean": 0.5240586916792738,
1669
+ "composition_top1": 0.09090909090909091,
1670
+ "mean_fraction_generated": {
1671
+ "T cell": 0.513688,
1672
+ "B cell": 0.109957,
1673
+ "Monocyte": 0.268788,
1674
+ "NK cell": 0.057325,
1675
+ "DC": 0.01219,
1676
+ "Other": 0.038052
1677
+ },
1678
+ "mean_fraction_observed": {
1679
+ "T cell": 0.486896,
1680
+ "B cell": 0.174321,
1681
+ "Monocyte": 0.203182,
1682
+ "NK cell": 0.082319,
1683
+ "DC": 0.005509,
1684
+ "Other": 0.047773
1685
+ }
1686
+ },
1687
+ "pseudobulk": {
1688
+ "n_genes": 5975,
1689
+ "r_median": 0.8479560271087334,
1690
+ "r_mean": 0.842760037788775,
1691
+ "top1": 0.12987012987012986,
1692
+ "n_top1": 10,
1693
+ "own_rank_median": 15.0,
1694
+ "chance_top1": 0.012987012987012988
1695
+ },
1696
+ "precision_coverage": {
1697
+ "precision": 0.8290909090909091,
1698
+ "coverage": 0.1870995670995671,
1699
+ "density": 0.32171428571428573,
1700
+ "n_query": 11550,
1701
+ "n_reference": 11550
1702
+ },
1703
+ "precision_coverage_depth_matched": {
1704
+ "precision": 0.8045021645021645,
1705
+ "coverage": 0.37974025974025977,
1706
+ "density": 0.38337662337662337,
1707
+ "detected_median_before": {
1708
+ "R1": 412.0,
1709
+ "Q": 227.0
1710
+ },
1711
+ "detected_median_after": {
1712
+ "R1": 227.0,
1713
+ "Q": 227.0
1714
+ }
1715
+ },
1716
+ "monocyte_pct": {
1717
+ "generated_mean_over_donors": 26.87878787878788,
1718
+ "observed_mean_over_donors": 20.318176241847713,
1719
+ "generated_pooled_cells": 26.87878787878788
1720
+ },
1721
+ "median_umi_per_cell_scoring_genes": {
1722
+ "generated_pooled": 1557.0,
1723
+ "observed_pooled": 1982.0,
1724
+ "generated_mean_of_donor_medians": 1607.2987060546875,
1725
+ "observed_mean_of_donor_medians": 2130.8636363636365
1726
+ },
1727
+ "contrast": {
1728
+ "mean_cp10k": {
1729
+ "per_type": {
1730
+ "T cell": {
1731
+ "r_generated": 0.052133505401810505,
1732
+ "r_broadcast": 0.19483197008080103,
1733
+ "partial_r_generated_given_broadcast": -0.02737342151791342,
1734
+ "r_generated_vs_broadcast": 0.3942266674638575,
1735
+ "n_genes": 3259
1736
+ },
1737
+ "B cell": {
1738
+ "r_generated": 0.15121735038707143,
1739
+ "r_broadcast": 0.1956631017462337,
1740
+ "partial_r_generated_given_broadcast": 0.10316861078556443,
1741
+ "r_generated_vs_broadcast": 0.27581819703814464,
1742
+ "n_genes": 3311
1743
+ },
1744
+ "Monocyte": {
1745
+ "r_generated": 0.3408186364057482,
1746
+ "r_broadcast": 0.46570128350842255,
1747
+ "partial_r_generated_given_broadcast": 0.22154248715146888,
1748
+ "r_generated_vs_broadcast": 0.335213966050506,
1749
+ "n_genes": 3304
1750
+ },
1751
+ "NK cell": {
1752
+ "r_generated": 0.036770809744173516,
1753
+ "r_broadcast": 0.11259961795181564,
1754
+ "partial_r_generated_given_broadcast": 0.006486238179794962,
1755
+ "r_generated_vs_broadcast": 0.2714739011914716,
1756
+ "n_genes": 3235
1757
+ }
1758
+ },
1759
+ "mean_r_generated": 0.14523507548470094,
1760
+ "mean_r_broadcast": 0.2421989933218182,
1761
+ "mean_partial_r": 0.07595597864972872
1762
+ },
1763
+ "pseudobulk_log1p_cpm": {
1764
+ "per_type": {
1765
+ "T cell": {
1766
+ "r_generated": 0.1251725839771248,
1767
+ "r_broadcast": 0.23486923329019224,
1768
+ "partial_r_generated_given_broadcast": 0.022039852277764404,
1769
+ "r_generated_vs_broadcast": 0.4515611783008817,
1770
+ "n_genes": 3259
1771
+ },
1772
+ "B cell": {
1773
+ "r_generated": 0.14997733843122826,
1774
+ "r_broadcast": 0.2515947136691086,
1775
+ "partial_r_generated_given_broadcast": 0.0959562571126434,
1776
+ "r_generated_vs_broadcast": 0.23754902078863835,
1777
+ "n_genes": 3311
1778
+ },
1779
+ "Monocyte": {
1780
+ "r_generated": 0.25887630607436296,
1781
+ "r_broadcast": 0.6163737975455943,
1782
+ "partial_r_generated_given_broadcast": 0.04583703673653782,
1783
+ "r_generated_vs_broadcast": 0.36549081988546517,
1784
+ "n_genes": 3304
1785
+ },
1786
+ "NK cell": {
1787
+ "r_generated": 0.05352512517193727,
1788
+ "r_broadcast": 0.05733272289136945,
1789
+ "partial_r_generated_given_broadcast": 0.0452160527710282,
1790
+ "r_generated_vs_broadcast": 0.1558448300286154,
1791
+ "n_genes": 3235
1792
+ }
1793
+ },
1794
+ "mean_r_generated": 0.14688783841366332,
1795
+ "mean_r_broadcast": 0.2900426168490661,
1796
+ "mean_partial_r": 0.052262299724493456
1797
+ }
1798
+ },
1799
+ "deg_top50": {
1800
+ "types_scored": [
1801
+ "T cell",
1802
+ "B cell",
1803
+ "Monocyte",
1804
+ "NK cell",
1805
+ "DC"
1806
+ ],
1807
+ "types_not_scored": {},
1808
+ "per_type": {
1809
+ "T cell": {
1810
+ "deg_scored": true,
1811
+ "top50_overlap": 3,
1812
+ "top50_jaccard": 0.030927835051546393,
1813
+ "obs_top_list_size": 50,
1814
+ "gen_top_list_size": 50,
1815
+ "top50_overlap_broadcast": 1,
1816
+ "top50_jaccard_broadcast": 0.010101010101010102,
1817
+ "n_cells_obs": 277774,
1818
+ "n_cells_gen": 59331
1819
+ },
1820
+ "B cell": {
1821
+ "deg_scored": true,
1822
+ "top50_overlap": 1,
1823
+ "top50_jaccard": 0.010101010101010102,
1824
+ "obs_top_list_size": 50,
1825
+ "gen_top_list_size": 50,
1826
+ "top50_overlap_broadcast": 0,
1827
+ "top50_jaccard_broadcast": 0.0,
1828
+ "n_cells_obs": 92596,
1829
+ "n_cells_gen": 12700
1830
+ },
1831
+ "Monocyte": {
1832
+ "deg_scored": true,
1833
+ "top50_overlap": 5,
1834
+ "top50_jaccard": 0.05263157894736842,
1835
+ "obs_top_list_size": 50,
1836
+ "gen_top_list_size": 50,
1837
+ "top50_overlap_broadcast": 9,
1838
+ "top50_jaccard_broadcast": 0.0989010989010989,
1839
+ "n_cells_obs": 98968,
1840
+ "n_cells_gen": 31045
1841
+ },
1842
+ "NK cell": {
1843
+ "deg_scored": true,
1844
+ "top50_overlap": 0,
1845
+ "top50_jaccard": 0.0,
1846
+ "obs_top_list_size": 50,
1847
+ "gen_top_list_size": 50,
1848
+ "top50_overlap_broadcast": 1,
1849
+ "top50_jaccard_broadcast": 0.010101010101010102,
1850
+ "n_cells_obs": 45385,
1851
+ "n_cells_gen": 6621
1852
+ },
1853
+ "DC": {
1854
+ "deg_scored": true,
1855
+ "top50_overlap": 0,
1856
+ "top50_jaccard": 0.0,
1857
+ "obs_top_list_size": 50,
1858
+ "gen_top_list_size": 8,
1859
+ "top50_overlap_broadcast": 1,
1860
+ "top50_jaccard_broadcast": 0.010101010101010102,
1861
+ "n_cells_obs": 3031,
1862
+ "n_cells_gen": 1408
1863
+ }
1864
+ },
1865
+ "sum": 9,
1866
+ "sum_4type": 9,
1867
+ "max": 250,
1868
+ "mean": 1.8,
1869
+ "sum_broadcast": 12,
1870
+ "sum_broadcast_4type": 11,
1871
+ "broadcast_n_significant": 883,
1872
+ "seconds": 0.18
1873
+ },
1874
+ "seconds": 18.7
1875
+ }
1876
+ },
1877
+ "code_sha256": {
1878
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
1879
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
1880
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da",
1881
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py": "48b12d794782b840838853e93e0fc55fab00532c4b3698f4588e926b985d2881",
1882
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/immicro/tools/immicro_common.py": "c5c30e917148cc5e664e91ea30c11bbdff9b6d1f53a3e0a13e16b1917eff37e9",
1883
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/predict_scanvi.py": "482ee5dcf4d72b54bc36cbb6dcff62e5030bc7afc46cb5fb01eca73a82ee45a5",
1884
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/poisson_readout.py": "8bfa080942fbcdc89ae23b276524a1a83266fb8cbc56b9af279e50f82e6cde38"
1885
+ },
1886
+ "seconds": 102.9
1887
+ }
paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/x1_priority_20261015/builds/20261015T120743086141Z/sources/e1e16b5f780a7a2c/manifest.json ADDED
@@ -0,0 +1,153 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema": "paired_ft_extra_metrics.v1",
3
+ "dataset": "ye2026_sepsis",
4
+ "design": "scored",
5
+ "unit": "strict",
6
+ "written_utc": "2026-10-12T16:00:54.030174+00:00",
7
+ "command": [
8
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/tools/score_strict.py",
9
+ "--support-manifest",
10
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/protocol/splits/ye2026_sepsis/disease/draw1/support.json",
11
+ "--out",
12
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/ye2026_sepsis/disease/draw1",
13
+ "--action",
14
+ "all",
15
+ "--threads",
16
+ "4",
17
+ "--arm",
18
+ "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw1/lora.npz",
19
+ "--arm",
20
+ "pairedcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw1/pairedcal.npz",
21
+ "--arm",
22
+ "scsemi=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw1/scsemi.npz",
23
+ "--arm",
24
+ "raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/raw.npz",
25
+ "--arm",
26
+ "refcal=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/global/ye2026_sepsis/refcal.npz"
27
+ ],
28
+ "threads": 4,
29
+ "donors": [
30
+ "Abd-PS04",
31
+ "Abd-PS05",
32
+ "Abd-PS07",
33
+ "Abd-PS19",
34
+ "Abd-PS20",
35
+ "Abd-PS23",
36
+ "Abd-PS27",
37
+ "Abd-S102",
38
+ "Abd-S103",
39
+ "Abd-S120",
40
+ "Abd-S123",
41
+ "Abd-S156",
42
+ "Abd-S39",
43
+ "Abd-S42",
44
+ "Abd-S47",
45
+ "Abd-S51",
46
+ "Abd-S54",
47
+ "Abd-S57",
48
+ "Abd-S66",
49
+ "Abd-S79",
50
+ "Abd-S83",
51
+ "Abd-S98",
52
+ "HC01",
53
+ "HC05",
54
+ "HC07",
55
+ "HC09",
56
+ "HC13",
57
+ "HC16",
58
+ "IC10",
59
+ "IC15",
60
+ "IC16",
61
+ "IC19",
62
+ "IC22",
63
+ "IC23",
64
+ "PHC01",
65
+ "PHC02",
66
+ "PHC03",
67
+ "PHC05",
68
+ "PIC01",
69
+ "PIC02",
70
+ "PIC04",
71
+ "PIC05",
72
+ "Res-PS02",
73
+ "Res-PS03",
74
+ "Res-PS12",
75
+ "Res-PS16",
76
+ "Res-PS21",
77
+ "Res-PS22",
78
+ "Res-PS25",
79
+ "Res-PS26",
80
+ "Res-S10",
81
+ "Res-S125",
82
+ "Res-S127",
83
+ "Res-S136",
84
+ "Res-S139",
85
+ "Res-S146",
86
+ "Res-S149",
87
+ "Res-S150",
88
+ "Res-S174",
89
+ "Res-S177",
90
+ "Res-S184",
91
+ "Res-S19",
92
+ "Res-S26",
93
+ "Res-S40",
94
+ "Res-S77",
95
+ "Res-S87",
96
+ "Skin-S140",
97
+ "Skin-S142",
98
+ "Skin-S152",
99
+ "Skin-S38",
100
+ "Skin-S43",
101
+ "Skin-S46",
102
+ "Skin-S52",
103
+ "Skin-S74",
104
+ "Uri-S157",
105
+ "Uri-S20",
106
+ "Uri-S93"
107
+ ],
108
+ "n_samples": 77,
109
+ "calls": {
110
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/scores/ye2026_sepsis/disease/draw1/score": {
111
+ "arms": [
112
+ "lora",
113
+ "pairedcal",
114
+ "scsemi",
115
+ "raw",
116
+ "refcal"
117
+ ],
118
+ "summary_sha256": "166acaf4ca9da339dbc39a5fea6533c4a08d657668c9e23128220bc832696686"
119
+ }
120
+ },
121
+ "reference_sha256": "bac12da8a241652cb75100a1b082b2be56806c9bf2fd20ce6f927f19683ea5b8",
122
+ "bandwidth_m": 27.505933508563906,
123
+ "params": {
124
+ "seed": 20261001,
125
+ "ks": [
126
+ 3,
127
+ 5,
128
+ 10
129
+ ],
130
+ "knn_c2st_k": 5,
131
+ "rf_trees": 300,
132
+ "cv_folds": 5,
133
+ "bw_multiples": [
134
+ 0.5,
135
+ 1.0,
136
+ 2.0
137
+ ],
138
+ "bw_max_cells": 4000,
139
+ "en_pcs": 100,
140
+ "en_lb_max_queries_all_cells": 20000,
141
+ "en_all_cells": true
142
+ },
143
+ "n_representative_rows": null,
144
+ "fetched_from_server2": [],
145
+ "code_sha256": {
146
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/extra_metrics.py": "e76a6cd4c1c5ef7184e97755edcd0f48726b56ba251545a5b5a4b12bb766b0c2",
147
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
148
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
149
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da"
150
+ },
151
+ "seconds": 1365.9,
152
+ "max_abs_diff_k10_pooled": 0.0
153
+ }