Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/backups/preflight_rejected_v1/REASON.json

@@ -0,0 +1,29 @@
+{
+  "reason": "Prelaunch review: Imperial date axis was inconsistent; all support and conditions regenerated after fixes; no GPU used old manifests.",
+  "records": [
+    {
+      "original": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/protocol/splits",
+      "preserved": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/backups/preflight_rejected_v1/protocol/splits"
+    },
+    {
+      "original": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro",
+      "preserved": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/backups/preflight_rejected_v1/data/immicro"
+    },
+    {
+      "original": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ye2026_sepsis",
+      "preserved": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/backups/preflight_rejected_v1/data/ye2026_sepsis"
+    },
+    {
+      "original": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/imperial_eskd",
+      "preserved": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/backups/preflight_rejected_v1/data/imperial_eskd"
+    },
+    {
+      "original": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/giroux2022",
+      "preserved": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/backups/preflight_rejected_v1/data/giroux2022"
+    },
+    {
+      "original": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ji2025_chili",
+      "preserved": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/backups/preflight_rejected_v1/data/ji2025_chili"
+    }
+  ]
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/backups/preflight_rejected_v1/data/giroux2022/disease/draw0/CONDITIONS.json

@@ -0,0 +1,16 @@
+{
+  "support_sha256": "074d1cf9ca3951ef1a032239eabb9d3a13f0f9a2030b030dcbe425ac71d46700",
+  "support_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/protocol/splits/giroux2022/disease/draw0/support.json",
+  "fit_sample_ids": [
+    "0B943B_d0",
+    "BAAF62_d0",
+    "7085CA_d0",
+    "180E1A_d0",
+    "B85D75_d0"
+  ],
+  "alpha_genes_estimated": 10829,
+  "files_sha256": {
+    "test_raw.npz": "f04c5725cf7d20ca4ca26d2ac43352d8c233b9d6c4d7ddc2116e3be4694623a9",
+    "test_cal.npz": "0f3d8786986b06afa0212608691ad6def04b52d663428f2fc05cedf55c29ad2b"
+  }
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/backups/preflight_rejected_v1/data/giroux2022/disease/draw1/CONDITIONS.json

@@ -0,0 +1,16 @@
+{
+  "support_sha256": "1a20024ce53f3aeb268784fed7fed630ef326f8ffa89fa9bc150661c1506b7e2",
+  "support_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/protocol/splits/giroux2022/disease/draw1/support.json",
+  "fit_sample_ids": [
+    "7085CA_d0",
+    "2AD75E_d0",
+    "BAAF62_d0",
+    "B85D75_d0",
+    "82CCF5_d0"
+  ],
+  "alpha_genes_estimated": 10853,
+  "files_sha256": {
+    "test_raw.npz": "935e890f67fc789b9ecf47b5c90157bfe0a1983d6ffdb1ea2d198b6de9767f47",
+    "test_cal.npz": "fef7dd6780a63ed21f8669de9629cc874ef2de6f864e2dd85fd6512d505262f7"
+  }
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/backups/preflight_rejected_v1/data/giroux2022/disease/draw2/CONDITIONS.json

@@ -0,0 +1,16 @@
+{
+  "support_sha256": "c9ac2355733aaf62165d452aaa3f2a4ee95874fc15e983c8c06cec01a9b0abb5",
+  "support_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/protocol/splits/giroux2022/disease/draw2/support.json",
+  "fit_sample_ids": [
+    "0B943B_d0",
+    "450905_d0",
+    "BAAF62_d0",
+    "B85D75_d0",
+    "180E1A_d0"
+  ],
+  "alpha_genes_estimated": 10876,
+  "files_sha256": {
+    "test_raw.npz": "fedb8e8039576499367bfec5479e15b4bac720126d8c5d7412d1d12f85531c28",
+    "test_cal.npz": "072d4c8a520fefd2ff8d9bd59ac2d2c4af8df1e24d38df0bb2c276c60c6f1b46"
+  }
+}