junidude14 commited on
Commit
611d5a2
·
verified ·
1 Parent(s): 3b8dc0b

Archive 4 checkpoints (1-4)

Browse files
paper-releases/pbisc-diffusion/updates/20261003T174003Z-scsemi-readout-sensitivity/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/fewshot_n5/draw4_scsemi5nt/per_donor.csv ADDED
@@ -0,0 +1,144 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
2
+ scsemi5nt,C20_1004,covid_positive,1500,1810,150,0.558,0.43425414364640885,0.17733333333333334,0.3994475138121547,0.12,0.03867403314917127,0.12133333333333333,0.07790055248618785,0.0033333333333333335,0.04751381215469613,0.02,0.0022099447513812156,0.5325893186003683,0.5911691602962323,0.8883138502087337,128,False,0.76,0.31333333333333335,0.82,0.32,12.0,3.867403314917127,1085.0,1373.5
3
+ scsemi5nt,C20_1404,covid_positive,1500,5836,150,0.432,0.4885195339273475,0.018,0.2705620287868403,0.09866666666666667,0.015421521590130226,0.43666666666666665,0.204592186429061,0.011333333333333334,0.016620973269362578,0.0033333333333333335,0.004283755997258396,0.6306392506282842,0.38288467460802705,0.9133507467209494,20,False,0.8866666666666667,0.47333333333333333,0.9133333333333333,0.6,9.866666666666667,1.5421521590130227,1084.0,1473.0
4
+ scsemi5nt,C21_1004,covid_positive,1500,5552,150,0.49533333333333335,0.8982348703170029,0.09933333333333333,0.08609510086455331,0.12333333333333334,0.0,0.186,0.0111671469740634,0.08533333333333333,0.0005403458213256485,0.010666666666666666,0.003962536023054755,0.8058030739673391,0.826057012140823,0.8347021028316507,142,False,0.7333333333333333,0.15333333333333332,0.7933333333333333,0.20666666666666667,12.333333333333334,0.0,1086.0,1563.5
5
+ scsemi5nt,C21_1704,covid_positive,1500,4570,150,0.8493333333333334,0.7275711159737418,0.07466666666666667,0.2214442013129103,0.014666666666666666,0.004814004376367615,0.048666666666666664,0.022319474835886213,0.01,0.011816192560175055,0.0026666666666666666,0.012035010940919038,0.31592414296134214,0.6818042238645966,0.8222863531656344,71,False,0.58,0.08666666666666667,0.8466666666666667,0.32666666666666666,1.4666666666666666,0.48140043763676155,1085.0,2131.0
6
+ scsemi5nt,C21_2504,covid_positive,1500,5048,150,0.7786666666666666,0.7567353407290016,0.14733333333333334,0.12361331220285261,0.03333333333333333,0.06220285261489699,0.014,0.039619651347068144,0.019333333333333334,0.011687797147385102,0.007333333333333333,0.006141045958795562,0.10897834125726355,0.5444708951550008,0.8184153934449894,3,False,0.6533333333333333,0.06666666666666667,0.9133333333333333,0.5533333333333333,3.3333333333333335,6.220285261489699,1087.0,2692.5
7
+ scsemi5nt,C23_2204,covid_positive,1500,3088,150,0.5313333333333333,0.685880829015544,0.11333333333333333,0.10362694300518134,0.23666666666666666,0.06703367875647669,0.098,0.11269430051813471,0.018666666666666668,0.025906735751295335,0.002,0.0048575129533678756,0.35867875647668396,0.39112008771380663,0.9047057630469025,27,False,0.84,0.28,0.8466666666666667,0.6066666666666667,23.666666666666668,6.703367875647668,1084.0,1936.5
8
+ scsemi5nt,C31_1304,covid_positive,1500,3525,150,0.5646666666666667,0.782695035460993,0.11866666666666667,0.1075177304964539,0.204,0.007659574468085106,0.07933333333333334,0.07716312056737588,0.030666666666666665,0.02070921985815603,0.0026666666666666666,0.00425531914893617,0.4392340425531916,0.5936184984835277,0.8698405720984791,94,False,0.9,0.26666666666666666,0.8266666666666667,0.5733333333333334,20.4,0.7659574468085106,1086.0,1623.0
9
+ scsemi5nt,C31_2004,covid_positive,1500,2265,150,0.5246666666666666,0.8004415011037528,0.112,0.08123620309050773,0.222,0.039293598233995586,0.11666666666666667,0.05121412803532009,0.022,0.022958057395143488,0.0026666666666666666,0.004856512141280353,0.5578454746136866,0.6291114297690472,0.9103265531341633,60,False,0.7333333333333333,0.12666666666666668,0.8466666666666667,0.48,22.2,3.9293598233995586,1084.0,1910.0
10
+ scsemi5nt,C31_2704,covid_positive,1500,4200,150,0.5093333333333333,0.7042857142857143,0.108,0.08023809523809523,0.23,0.08714285714285715,0.134,0.09857142857142857,0.016666666666666666,0.025952380952380952,0.002,0.0038095238095238095,0.4120952380952381,0.43679985613297023,0.9171104777678479,19,False,0.7933333333333333,0.26,0.8533333333333334,0.5933333333333334,23.0,8.714285714285715,1087.0,1704.0
11
+ scsemi5nt,C34_1404,covid_positive,1500,2483,150,0.5906666666666667,0.8771647200966572,0.16066666666666668,0.01973419250906162,0.128,0.016915022150624244,0.09866666666666667,0.07047925896093435,0.005333333333333333,0.011679420056383408,0.016666666666666666,0.004027386226339106,0.5856882803060814,0.7836657691088813,0.8857114178032858,119,False,0.7533333333333333,0.14,0.7933333333333333,0.35333333333333333,12.8,1.6915022150624244,1086.0,1720.0
12
+ scsemi5nt,C34_2104,covid_positive,1500,2808,150,0.5393333333333333,0.7916666666666666,0.09733333333333333,0.024216524216524215,0.22333333333333333,0.041666666666666664,0.114,0.12428774928774929,0.022,0.013888888888888888,0.004,0.004273504273504274,0.5257891737891737,0.6126696622489,0.9156737733739392,74,False,0.84,0.13333333333333333,0.8533333333333334,0.5133333333333333,22.333333333333332,4.166666666666666,1086.0,2067.5
13
+ scsemi5nt,C34_2504,covid_positive,1500,1945,150,0.5293333333333333,0.6961439588688946,0.11133333333333334,0.024678663239074552,0.22066666666666668,0.12544987146529563,0.11333333333333333,0.12904884318766066,0.022,0.02416452442159383,0.0033333333333333335,0.0005141388174807198,0.36938131962296483,0.421624246653356,0.9190129330977476,33,False,0.82,0.22666666666666666,0.88,0.74,22.066666666666666,12.544987146529563,1085.0,2111.0
14
+ scsemi5nt,C40_1504,covid_positive,1500,5482,150,0.5706666666666667,0.7433418460415907,0.18133333333333335,0.09649762860269974,0.126,0.05600145932141554,0.10133333333333333,0.09157241882524626,0.0026666666666666666,0.009668004377964246,0.018,0.002918642831083546,0.35935303417244324,0.5088424580632146,0.9126471940892186,27,False,0.7066666666666667,0.22666666666666666,0.6933333333333334,0.36,12.6,5.6001459321415545,1086.0,1253.5
15
+ scsemi5nt,C40_2204,covid_positive,1500,975,150,0.3973333333333333,0.6933333333333334,0.10066666666666667,0.13538461538461538,0.142,0.028717948717948718,0.2906666666666667,0.12923076923076923,0.06533333333333333,0.010256410256410256,0.004,0.003076923076923077,0.6614358974358974,0.4314596642683807,0.9222128040619111,92,False,0.84,0.13333333333333333,0.8533333333333334,0.6066666666666667,14.2,2.871794871794872,1086.0,1808.0
16
+ scsemi5nt,C40_0105,covid_positive,1500,8728,150,0.768,0.42587076076993585,0.09733333333333333,0.036778185151237396,0.06,0.4643675527039413,0.06,0.05728689275893675,0.010666666666666666,0.013175985334555454,0.004,0.0025206232813932174,0.8137537427436602,0.5776921188650213,0.8570643738258061,52,False,0.6266666666666667,0.22,0.84,0.19333333333333333,6.0,46.43675527039413,1086.0,1862.0
17
+ scsemi5nt,C42_1504,covid_positive,1500,2762,150,0.2653333333333333,0.7320782041998551,0.11666666666666667,0.13613323678493844,0.20133333333333334,0.020275162925416364,0.4046666666666667,0.0894279507603186,0.0,0.013758146270818247,0.012,0.00832729905865315,0.9999391745112238,0.5183187072864084,0.8947557898814469,130,False,0.7066666666666667,0.18666666666666668,0.6933333333333334,0.2,20.133333333333333,2.0275162925416366,1086.0,1302.0
18
+ scsemi5nt,C42_2204,covid_positive,1500,4970,150,0.4886666666666667,0.8511066398390342,0.09866666666666667,0.06317907444668008,0.06733333333333333,0.035211267605633804,0.2966666666666667,0.035211267605633804,0.044,0.012072434607645875,0.004666666666666667,0.0032193158953722333,0.7248799463447351,0.7325748101231112,0.9205069835869055,81,False,0.9133333333333333,0.08,0.9266666666666666,0.16,6.7333333333333325,3.5211267605633805,1085.0,1462.0
19
+ scsemi5nt,C42_2704,covid_positive,1500,8918,150,0.5053333333333333,0.8535546086566494,0.10533333333333333,0.04619869925992375,0.22,0.036891679748822605,0.146,0.054047992823503026,0.02,0.006391567616057412,0.0033333333333333335,0.0029154518950437317,0.6964425506466323,0.7374707477583418,0.8910944357203344,103,False,0.8333333333333334,0.12,0.9333333333333333,0.3333333333333333,22.0,3.6891679748822606,1085.0,1489.0
20
+ scsemi5nt,C58_1604,covid_negative,1500,265,132,0.466,0.7018867924528301,0.094,0.04150943396226415,0.07066666666666667,0.0037735849056603774,0.32866666666666666,0.2188679245283019,0.037333333333333336,0.01509433962264151,0.0033333333333333335,0.018867924528301886,0.5028427672955974,0.5424653360208308,0.9115652623837227,99,False,0.9166666666666666,0.49242424242424243,0.9166666666666666,0.6666666666666666,7.066666666666667,0.37735849056603776,1085.0,1285.0
21
+ scsemi5nt,C58_2501,covid_positive,1500,1671,150,0.5766666666666667,0.42848593656493117,0.16066666666666668,0.0353081986834231,0.126,0.31717534410532616,0.11466666666666667,0.15320167564332735,0.004,0.05326152004787552,0.018,0.012567324955116697,0.5579437462597248,0.3323930763933689,0.9068668071878038,31,False,0.8066666666666666,0.7866666666666666,0.8733333333333333,0.56,12.6,31.717534410532615,1087.0,700.0
22
+ scsemi5nt,C58_2901,covid_positive,1500,1615,150,0.972,0.6179566563467492,0.01,0.03653250773993808,0.0006666666666666666,0.17956656346749225,0.0,0.10835913312693499,0.002,0.03219814241486068,0.015333333333333332,0.025386996904024767,0.7080866873065016,0.29284138321987946,0.6432927821666721,64,False,0.3933333333333333,0.72,1.0,0.5333333333333333,0.06666666666666667,17.956656346749224,1086.0,882.0
23
+ scsemi5nt,C58_0102,covid_positive,1500,972,150,0.7873333333333333,0.5339506172839507,0.09666666666666666,0.027777777777777776,0.05533333333333333,0.2880658436213992,0.04133333333333333,0.11316872427983539,0.014666666666666666,0.03292181069958848,0.004666666666666667,0.00411522633744856,0.6456460905349793,0.32310574214870186,0.7820344248175001,92,False,0.76,0.6666666666666666,0.9,0.22666666666666666,5.533333333333333,28.80658436213992,1087.0,749.0
24
+ scsemi5nt,C58_0402,covid_positive,1500,9254,150,0.5346666666666666,0.4245731575534904,0.018,0.01988329371082775,0.21933333333333332,0.4091203803760536,0.186,0.11681435055111303,0.038,0.02485411713853469,0.004,0.004754700669980549,0.384850082847057,0.4714492302250327,0.9466588764752735,11,False,0.92,0.66,0.92,0.78,21.933333333333334,40.912038037605356,1085.0,1006.0
25
+ scsemi5nt,C58_1003,recovery,1500,4918,150,0.6786666666666666,0.5917039446929646,0.062,0.02745018300122001,0.19066666666666668,0.1691744611630744,0.024666666666666667,0.14721431476209842,0.021333333333333333,0.05612037413582757,0.02266666666666667,0.008336722244814965,0.31466937779585197,0.25566936712348404,0.7870929768085656,36,False,0.46,0.8066666666666666,0.8933333333333333,0.42,19.066666666666666,16.917446116307442,1087.0,745.5
26
+ scsemi5nt,C60_2504,covid_positive,1500,1837,150,0.4513333333333333,0.8911268372346217,0.10133333333333333,0.05443658138268917,0.13733333333333334,0.00979858464888405,0.236,0.032117583015786606,0.07133333333333333,0.009254218835057159,0.0026666666666666666,0.00326619488296135,0.8807860642351661,0.8045028930001179,0.910223911520233,126,False,0.9133333333333333,0.32,0.94,0.38,13.733333333333334,0.979858464888405,1087.0,1187.0
27
+ scsemi5nt,C63_1704,covid_positive,1500,3305,150,0.21466666666666667,0.7718608169440242,0.11866666666666667,0.11981845688350984,0.20533333333333334,0.013010590015128594,0.44666666666666666,0.08199697428139183,0.005333333333333333,0.006959152798789713,0.009333333333333334,0.006354009077155824,1.1199435199193142,0.5699378547834837,0.9004634250987313,119,False,0.9,0.16666666666666666,0.9,0.28,20.533333333333335,1.3010590015128594,1085.0,1364.0
28
+ scsemi5nt,C63_2404,covid_positive,1500,2143,150,0.8486666666666667,0.6971535230984601,0.072,0.1675221651889874,0.014666666666666666,0.0377974801679888,0.05266666666666667,0.08726084927671489,0.010666666666666666,0.007932804479701353,0.0013333333333333333,0.0023331777881474567,0.3084940115103437,0.5097354270036487,0.8863697124975103,18,False,0.5466666666666666,0.18666666666666668,0.8666666666666667,0.4266666666666667,1.4666666666666666,3.7797480167988797,1085.0,1596.0
29
+ scsemi5nt,C63_2904,covid_positive,1500,1684,150,0.8193333333333334,0.6775534441805225,0.092,0.14251781472684086,0.042666666666666665,0.08491686460807601,0.024666666666666667,0.0855106888361045,0.015333333333333332,0.007719714964370546,0.006,0.0017814726840855108,0.30722406967537613,0.4205265682434805,0.7792949499432671,28,False,0.64,0.20666666666666667,0.86,0.4066666666666667,4.266666666666667,8.491686460807601,1085.0,1647.5
30
+ scsemi5nt,C65_1704,covid_positive,1500,1117,150,0.146,0.5264100268576545,0.12666666666666668,0.13070725156669652,0.20333333333333334,0.03670546105640107,0.518,0.2909579230080573,0.0026666666666666666,0.009847806624888093,0.0033333333333333335,0.005371530886302597,0.7873398985377501,0.34764485555436003,0.9188388509586228,55,False,0.86,0.48,0.9066666666666666,0.5466666666666666,20.333333333333332,3.670546105640107,1087.0,1042.0
31
+ scsemi5nt,C65_2104,covid_positive,1500,274,137,0.17866666666666667,0.5766423357664233,0.12533333333333332,0.20802919708029197,0.20733333333333334,0.014598540145985401,0.47933333333333333,0.19343065693430658,0.004,0.0036496350364963502,0.005333333333333333,0.0036496350364963502,0.9613430656934306,0.40769883225158726,0.8814877624430453,139,False,0.781021897810219,0.291970802919708,0.7956204379562044,0.41605839416058393,20.733333333333334,1.4598540145985401,1084.0,1266.0
32
+ scsemi5nt,C65_2504,covid_positive,1500,1069,150,0.8493333333333334,0.6623012160898035,0.072,0.11412535079513564,0.013333333333333334,0.031805425631431246,0.05333333333333334,0.16931711880261927,0.011333333333333334,0.002806361085126286,0.0006666666666666666,0.019644527595884004,0.3911181789834737,0.3689269603792679,0.8625194955735076,39,False,0.48,0.23333333333333334,0.8333333333333334,0.34,1.3333333333333335,3.1805425631431246,1087.0,2137.0
33
+ scsemi5nt,C69_1804,covid_negative,1500,6901,150,0.806,0.819591363570497,0.124,0.028546587451094046,0.03133333333333333,0.0585422402550355,0.01,0.04637009129111723,0.024666666666666667,0.03231415736849732,0.004,0.014635560063758875,0.19090682509781184,0.6629704514610715,0.7777102994590347,27,False,0.5533333333333333,0.29333333333333333,0.96,0.30666666666666664,3.1333333333333333,5.85422402550355,1087.0,1211.0
34
+ scsemi5nt,C82_2504,covid_positive,1500,7154,150,0.856,0.8433044450656975,0.06933333333333333,0.03228962818003914,0.014666666666666666,0.047246295778585405,0.048666666666666664,0.037042214145932346,0.01,0.030192899077439196,0.0013333333333333333,0.009924517752306402,0.12272742521666202,0.708184553842989,0.8486560053778633,41,False,0.5533333333333333,0.29333333333333333,0.8733333333333333,0.2733333333333333,1.4666666666666666,4.724629577858541,1085.0,1210.0
35
+ scsemi5nt,C85_2004,covid_negative,1500,3618,150,0.7633333333333333,0.6199557766721946,0.13066666666666665,0.026810392482034272,0.04466666666666667,0.15201768933112217,0.029333333333333333,0.12493090105030404,0.021333333333333333,0.039524599226091764,0.010666666666666666,0.03676064123825318,0.49446766169154227,0.3188794160050589,0.8948550041327682,1,True,0.62,0.4,0.7933333333333333,0.4533333333333333,4.466666666666667,15.201768933112216,1087.0,1463.5
36
+ scsemi5nt,C93_2104,covid_positive,1500,5003,150,0.762,0.5098940635618628,0.13466666666666666,0.06516090345792525,0.03933333333333333,0.15790525684589246,0.028,0.23246052368578854,0.028,0.029982010793523885,0.008,0.004597241655006996,0.6500289159837431,0.17851516238611484,0.8966733755493769,24,False,0.6466666666666666,0.4666666666666667,0.8133333333333334,0.58,3.933333333333333,15.790525684589246,1085.0,1416.0
37
+ scsemi5nt,C93_2704,covid_positive,1500,6623,150,0.7693333333333333,0.4635361618601842,0.096,0.031103729427751775,0.052,0.22044390759474558,0.06733333333333333,0.26256983240223464,0.010666666666666666,0.018873622225577532,0.004666666666666667,0.003472746489506266,0.7437747244451154,0.29316451474958,0.865574083713008,9,False,0.5266666666666666,0.47333333333333333,0.8266666666666667,0.48,5.2,22.04439075947456,1086.0,1439.0
38
+ scsemi5nt,C93_0405,covid_positive,1500,5527,150,0.7666666666666667,0.47421747783607743,0.14266666666666666,0.03057716663651167,0.036,0.2131355165550932,0.028666666666666667,0.2529401121765877,0.020666666666666667,0.026777637054459923,0.005333333333333333,0.0023520897412701285,0.815039864905615,0.25928829221898125,0.8730240228512675,4,False,0.6333333333333333,0.41333333333333333,0.86,0.38666666666666666,3.5999999999999996,21.31355165550932,1086.0,1471.0
39
+ scsemi5nt,C101_0601,covid_positive,1500,344,150,0.43933333333333335,0.6482558139534884,0.014666666666666666,0.03197674418604651,0.11266666666666666,0.14825581395348839,0.416,0.09302325581395349,0.010666666666666666,0.0377906976744186,0.006666666666666667,0.040697674418604654,0.6459534883720931,0.3744947058376843,0.9148710273697187,33,False,0.8666666666666667,0.44666666666666666,0.8866666666666667,0.5,11.266666666666666,14.825581395348838,1088.0,1309.0
40
+ scsemi5nt,C101_1101,covid_positive,1500,566,150,0.4846666666666667,0.27385159010600707,0.011333333333333334,0.04770318021201413,0.112,0.5106007067137809,0.37933333333333336,0.06537102473498234,0.007333333333333333,0.07420494699646643,0.005333333333333333,0.028268551236749116,1.049554770318021,0.7974033914028266,0.8836640850394475,85,False,0.74,0.6866666666666666,0.7666666666666667,0.5533333333333333,11.200000000000001,51.060070671378085,1084.0,1003.0
41
+ scsemi5nt,C101_1301,covid_positive,1500,2035,150,0.592,0.3154791154791155,0.166,0.05110565110565111,0.13066666666666665,0.4692874692874693,0.09066666666666667,0.057985257985257985,0.0026666666666666666,0.05847665847665848,0.018,0.047665847665847666,0.8481932841932842,0.7221149323687845,0.886338989377176,44,False,0.8066666666666666,0.6733333333333333,0.8066666666666666,0.41333333333333333,13.066666666666665,46.928746928746925,1086.0,875.0
42
+ scsemi5nt,C101_1801,covid_positive,1500,1555,150,0.9186666666666666,0.3562700964630225,0.026,0.3762057877813505,0.03333333333333333,0.12861736334405144,0.005333333333333333,0.03858520900321544,0.004666666666666667,0.028938906752411574,0.012,0.07138263665594856,1.1247931404072884,0.6204470850868845,0.6677062456532606,85,False,0.4666666666666667,0.56,0.9666666666666667,0.32666666666666666,3.3333333333333335,12.861736334405144,1086.0,806.0
43
+ scsemi5nt,C101_2001,covid_positive,1500,2130,150,0.784,0.4765258215962441,0.13333333333333333,0.2051643192488263,0.03333333333333333,0.22253521126760564,0.020666666666666667,0.05539906103286385,0.024666666666666667,0.022535211267605635,0.004,0.01784037558685446,0.6192112676056339,0.27657155628137864,0.7898603864870609,71,False,0.5866666666666667,0.6333333333333333,0.8733333333333333,0.2866666666666667,3.3333333333333335,22.253521126760564,1085.0,882.0
44
+ scsemi5nt,C101_2502,recovery,1500,587,150,0.7873333333333333,0.424190800681431,0.11533333333333333,0.06132879045996593,0.042,0.3679727427597956,0.02666666666666667,0.05792163543441227,0.016,0.07836456558773425,0.012666666666666666,0.010221465076660987,0.8391845542305509,0.49246044379491805,0.8686556484973637,92,False,0.37333333333333335,0.66,0.4866666666666667,0.25333333333333335,4.2,36.79727427597956,1086.0,822.0
45
+ scsemi5nt,C103_2204,covid_negative,1500,8742,150,0.6693333333333333,0.5037748798901853,0.15466666666666667,0.06394417753374514,0.08866666666666667,0.2772820864790666,0.036,0.1261725005719515,0.03266666666666666,0.0263097689315946,0.018666666666666668,0.0025165865934568747,0.5575758407687029,0.22898053310587163,0.815920081276489,33,False,0.6533333333333333,0.26666666666666666,0.8266666666666667,0.08,8.866666666666667,27.728208647906662,1087.0,1718.0
46
+ scsemi5nt,C104_2204,covid_negative,1500,11388,150,0.542,0.29004214963119074,0.1,0.03898840885142255,0.22733333333333333,0.4137688795223042,0.104,0.18580962416578856,0.026,0.06840533895328416,0.0006666666666666666,0.002985598876009835,0.6259388830347735,0.6005869248218639,0.8844496815751841,9,False,0.76,0.17333333333333334,0.82,0.38,22.733333333333334,41.37688795223042,1086.0,1965.5
47
+ scsemi5nt,C106_2204,covid_negative,1500,9233,150,0.8546666666666667,0.6097693057511101,0.06733333333333333,0.036824434095093686,0.014,0.19451965774937724,0.052,0.10733239467128777,0.011333333333333334,0.047980071482725005,0.0006666666666666666,0.003574136250406152,0.5508125203075923,0.30987026117345995,0.8301751853464274,21,False,0.58,0.15333333333333332,0.8666666666666667,0.22,1.4000000000000001,19.451965774937722,1086.0,1796.0
48
+ scsemi5nt,C108_2204,covid_negative,1500,1839,150,0.7453333333333333,0.6688417618270799,0.01,0.0032626427406199023,0.06333333333333334,0.03806416530723219,0.15066666666666667,0.25502990755845567,0.024666666666666667,0.021750951604132682,0.006,0.013050570962479609,0.22282762370853726,0.5467779063928259,0.8663286941978922,35,False,0.72,0.64,0.8466666666666667,0.35333333333333333,6.333333333333334,3.8064165307232187,1086.0,1341.0
49
+ scsemi5nt,C108_1501,covid_positive,1500,1488,150,0.4046666666666667,0.2956989247311828,0.014666666666666666,0.016129032258064516,0.12266666666666666,0.21841397849462366,0.44333333333333336,0.41935483870967744,0.008,0.04032258064516129,0.006666666666666667,0.010080645161290322,0.26589247311827957,0.6273434136382737,0.9155599835256336,10,False,0.7933333333333333,0.7266666666666667,0.8466666666666667,0.5733333333333334,12.266666666666666,21.841397849462364,1085.0,863.0
50
+ scsemi5nt,C108_1801,covid_positive,1500,806,150,0.4533333333333333,0.2853598014888337,0.014666666666666666,0.07568238213399504,0.11266666666666666,0.08560794044665013,0.4053333333333333,0.47890818858560796,0.011333333333333334,0.04466501240694789,0.0026666666666666666,0.02977667493796526,0.3900645161290323,0.7031329434575473,0.9034410909432765,54,False,0.8666666666666667,0.74,0.8733333333333333,0.5266666666666666,11.266666666666666,8.560794044665013,1085.0,676.0
51
+ scsemi5nt,C108_2201,covid_positive,1500,696,150,0.43533333333333335,0.2988505747126437,0.03933333333333333,0.041666666666666664,0.12133333333333333,0.09195402298850575,0.38266666666666665,0.5100574712643678,0.010666666666666666,0.021551724137931036,0.010666666666666666,0.035919540229885055,0.3317241379310345,0.7504284354512468,0.9218615696617737,16,False,0.8533333333333334,0.52,0.8466666666666667,0.6,12.133333333333333,9.195402298850574,1087.0,1399.5
52
+ scsemi5nt,C113_0605,covid_positive,1500,3274,150,0.5613333333333334,0.6053756872327428,0.17066666666666666,0.14141722663408673,0.124,0.032376298106292,0.12266666666666666,0.03512522907758094,0.0013333333333333333,0.030849114233353694,0.02,0.1548564447159438,0.41682915903074735,0.5467024804605793,0.8942885394675357,115,False,0.7533333333333333,0.18,0.84,0.5533333333333333,12.4,3.2376298106292003,1087.0,2026.0
53
+ scsemi5nt,C123_2404,covid_positive,1500,3758,150,0.176,0.5516232038318254,0.11066666666666666,0.04922831293241086,0.20733333333333334,0.08541777541245343,0.488,0.271953166577967,0.002,0.032730175625332626,0.016,0.009047365620010643,0.8127067589143162,0.34353769941174406,0.923778557392611,22,False,0.9133333333333333,0.25333333333333335,0.9,0.5466666666666666,20.733333333333334,8.541777541245343,1087.0,1299.0
54
+ scsemi5nt,C123_2904,covid_positive,1500,3252,150,0.566,0.49231242312423124,0.16066666666666668,0.07380073800738007,0.12333333333333334,0.19034440344403444,0.122,0.22478474784747848,0.0026666666666666666,0.01107011070110701,0.025333333333333333,0.007687576875768758,0.3563985239852398,0.15718934468419524,0.9037810224317939,27,False,0.64,0.20666666666666667,0.7,0.42,12.333333333333334,19.034440344403443,1086.0,1489.0
55
+ scsemi5nt,C123_0505,covid_positive,1500,2266,150,0.298,0.4854368932038835,0.11066666666666666,0.05383936451897617,0.206,0.27184466019417475,0.348,0.13901147396293026,0.005333333333333333,0.025154457193292144,0.032,0.02471315092674316,0.5462053545160341,0.2116373285290317,0.9161313945187868,41,False,0.9066666666666666,0.14,0.8733333333333333,0.48,20.599999999999998,27.184466019417474,1086.0,1849.0
56
+ scsemi5nt,C124_2404,covid_positive,1500,2290,150,0.7646666666666667,0.5100436681222708,0.09466666666666666,0.18777292576419213,0.056,0.08340611353711791,0.064,0.19519650655021833,0.012,0.017903930131004366,0.008666666666666666,0.005676855895196507,0.5152256186317322,0.23494530395777288,0.8531723168697667,24,False,0.64,0.16,0.8533333333333334,0.16,5.6000000000000005,8.340611353711791,1085.0,1635.0
57
+ scsemi5nt,C124_2704,covid_positive,1500,4137,150,0.77,0.5112400290065264,0.09533333333333334,0.11965192168237854,0.05266666666666667,0.06961566352429296,0.06533333333333333,0.27870437515107566,0.011333333333333334,0.015711868503746677,0.005333333333333333,0.005076142131979695,0.5180343243896544,0.2752833180808006,0.8516634829133064,11,False,0.6,0.12666666666666668,0.7933333333333333,0.10666666666666667,5.266666666666667,6.961566352429297,1087.0,1328.0
58
+ scsemi5nt,C124_0105,covid_positive,1500,5245,150,0.7786666666666666,0.5548141086749285,0.09333333333333334,0.07740705433746425,0.05333333333333334,0.06444232602478552,0.056,0.25681601525262154,0.012,0.041182078169685415,0.006666666666666667,0.005338417540514776,0.48221417222751817,0.3386566676430225,0.8297974422934608,8,False,0.6533333333333333,0.14,0.9,0.26666666666666666,5.333333333333334,6.444232602478552,1085.0,1944.0
59
+ scsemi5nt,C126_2504,covid_positive,1500,8159,150,0.5426666666666666,0.5618335580340728,0.11666666666666667,0.056992278465498224,0.21066666666666667,0.2332393675695551,0.106,0.11177840421620297,0.020666666666666667,0.028925113371736734,0.0033333333333333335,0.0072312783429341835,0.11934877640233689,0.2589288967759831,0.8937756571159948,20,False,0.8466666666666667,0.11333333333333333,0.8466666666666667,0.15333333333333332,21.066666666666666,23.32393675695551,1084.0,1410.0
60
+ scsemi5nt,C126_3004,covid_positive,1500,7181,150,0.536,0.743629021027712,0.11666666666666667,0.05848767581116836,0.214,0.05082857540732488,0.10266666666666667,0.1211530427517059,0.027333333333333334,0.0181033282272664,0.0033333333333333335,0.007798356774822448,0.4611608411084807,0.5096254631629721,0.8799589130773502,59,False,0.88,0.14666666666666667,0.92,0.26666666666666666,21.4,5.082857540732489,1084.0,1641.0
61
+ scsemi5nt,C126_0605,covid_positive,1500,6577,150,0.532,0.5716892200091227,0.11133333333333334,0.11023262885814201,0.19933333333333333,0.08712178804926259,0.13133333333333333,0.16618519081648167,0.024,0.055648471947696516,0.002,0.009122700319294512,0.22662449951852412,0.22003992572143777,0.9057596675669224,24,False,0.86,0.22,0.92,0.34,19.933333333333334,8.712178804926259,1084.0,1620.0
62
+ scsemi5nt,C127_2504,covid_positive,1500,2691,150,0.772,0.6648086213303604,0.09266666666666666,0.10999628390932739,0.054,0.03121516164994426,0.064,0.18097361575622445,0.010666666666666666,0.00966183574879227,0.006666666666666667,0.0033444816053511705,0.2686064659977704,0.3860902271513931,0.8675804559159593,48,False,0.5666666666666667,0.22,0.7333333333333333,0.16666666666666666,5.4,3.121516164994426,1087.0,1559.0
63
+ scsemi5nt,C127_0405,covid_positive,1500,9080,150,0.7933333333333333,0.4183920704845815,0.1,0.07444933920704846,0.043333333333333335,0.24295154185022028,0.046,0.24295154185022028,0.013333333333333334,0.018502202643171806,0.004,0.0027533039647577094,0.8034772393538914,0.29426676218633313,0.7822014294329169,35,False,0.6266666666666667,0.23333333333333334,0.8266666666666667,0.06,4.333333333333334,24.295154185022028,1087.0,1270.0
64
+ scsemi5nt,C127_1105,covid_positive,1500,5124,150,0.522,0.5739656518345043,0.022,0.09543325526932084,0.21666666666666667,0.14910226385636222,0.2,0.1649102263856362,0.037333333333333336,0.01522248243559719,0.002,0.001366120218579235,0.2507978142076503,0.17227750941850428,0.9368753189082455,30,False,0.9,0.32,0.8933333333333333,0.6866666666666666,21.666666666666668,14.910226385636221,1085.0,1529.5
65
+ scsemi5nt,C128_2504,covid_positive,1500,4306,150,0.44133333333333336,0.6421272642823966,0.10066666666666667,0.06618671620993961,0.07333333333333333,0.1692986530422666,0.3433333333333333,0.09939619136089178,0.037333333333333336,0.02275894101254064,0.004,0.00023223409196470042,0.5935185013159932,0.30990079804938797,0.9338166255173355,27,False,0.9333333333333333,0.28,0.9066666666666666,0.5466666666666666,7.333333333333333,16.92986530422666,1086.0,1385.5
66
+ scsemi5nt,C128_0405,covid_positive,1500,4498,150,0.7733333333333333,0.7550022232103157,0.146,0.13361493997332147,0.030666666666666665,0.053357047576700754,0.03,0.048910626945309024,0.015333333333333332,0.007114273010226767,0.004666666666666667,0.0020008892841262785,0.08320201571068617,0.5544123239040238,0.8854879629549579,55,False,0.5933333333333334,0.17333333333333334,0.7866666666666666,0.11333333333333333,3.0666666666666664,5.335704757670076,1085.0,1437.0
67
+ scsemi5nt,C128_1105,covid_positive,1500,6655,150,0.7526666666666667,0.7095416979714501,0.15466666666666667,0.04552967693463561,0.03333333333333333,0.15251690458302028,0.027333333333333334,0.05875281743050338,0.028,0.03215627347858753,0.004,0.0015026296018031556,0.30951865765088915,0.44649756050615236,0.8643315474930994,33,False,0.6,0.14666666666666667,0.8466666666666667,0.24,3.3333333333333335,15.251690458302027,1084.0,1871.0
68
+ scsemi5nt,C132_2804,covid_positive,1500,5471,150,0.8553333333333333,0.7344178395174557,0.072,0.13087186985925792,0.012666666666666666,0.021568269055017363,0.04666666666666667,0.09376713580698227,0.012666666666666666,0.01772984829098885,0.0006666666666666666,0.0016450374702979345,0.24183098763175528,0.5093998680139151,0.8510067770484483,27,False,0.4533333333333333,0.3466666666666667,0.8466666666666667,0.43333333333333335,1.2666666666666666,2.1568269055017364,1086.0,1362.0
69
+ scsemi5nt,C132_0205,covid_positive,1500,4671,150,0.546,0.6112181545707557,0.11866666666666667,0.11432241490044959,0.21266666666666667,0.08948833226289873,0.09466666666666666,0.13680154142581888,0.02666666666666667,0.046242774566473986,0.0013333333333333333,0.0019267822736030828,0.2550451723399699,0.27701422293541983,0.8865784025006134,32,False,0.7733333333333333,0.3,0.78,0.41333333333333333,21.266666666666666,8.948833226289873,1086.0,1457.0
70
+ scsemi5nt,C132_1105,covid_positive,1500,4699,150,0.5913333333333334,0.6814215790593743,0.019333333333333334,0.19472228133645456,0.20733333333333334,0.04618003830602256,0.128,0.06873802936795063,0.04933333333333333,0.007022770802298362,0.004666666666666667,0.001915301127899553,0.5309543874583244,0.5311081700521457,0.9210069656095375,58,False,0.8133333333333334,0.14666666666666667,0.86,0.56,20.733333333333334,4.618003830602256,1086.0,1737.0
71
+ scsemi5nt,C138_3004,covid_negative,1500,1909,150,0.5073333333333333,0.34468308014667365,0.108,0.025144054478784705,0.234,0.3609219486642221,0.132,0.1959140911471975,0.016,0.06862231534834992,0.0026666666666666666,0.004714510214772132,0.4910123974157499,0.5281468676155976,0.9078707585591201,14,False,0.8533333333333334,0.4266666666666667,0.8933333333333333,0.5133333333333333,23.400000000000002,36.09219486642221,1085.0,1398.0
72
+ scsemi5nt,C138_2301,covid_positive,1500,964,150,0.20666666666666667,0.38278008298755184,0.10133333333333333,0.0508298755186722,0.21266666666666667,0.12033195020746888,0.4646666666666667,0.3153526970954357,0.008666666666666666,0.03734439834024896,0.006,0.09336099585062241,0.5843042876901798,0.4812990193584171,0.92358327949494,23,False,0.86,0.64,0.8866666666666667,0.6933333333333334,21.266666666666666,12.033195020746888,1086.0,1072.0
73
+ scsemi5nt,C138_3001,covid_positive,1500,731,150,0.14,0.12311901504787962,0.108,0.08207934336525308,0.24333333333333335,0.4008207934336525,0.488,0.27359781121751026,0.0033333333333333335,0.02188782489740082,0.017333333333333333,0.09849521203830369,0.514407660738714,0.8573617659294562,0.9137198914424317,77,False,0.7333333333333333,0.42,0.7066666666666667,0.7266666666666667,24.333333333333336,40.08207934336525,1086.0,1223.0
74
+ scsemi5nt,C138_0202,covid_positive,1500,2861,150,0.4746666666666667,0.2153093324012583,0.042,0.0740999650471863,0.12266666666666666,0.5159035302341839,0.332,0.1422579517651171,0.008666666666666666,0.04194337644180356,0.02,0.01048584411045089,0.9172270767796808,0.7144985234943826,0.9154088588572096,52,False,0.68,0.32,0.72,0.44,12.266666666666666,51.59035302341839,1087.0,1031.0
75
+ scsemi5nt,C138_0402,covid_positive,1500,500,150,0.5686666666666667,0.344,0.16733333333333333,0.074,0.128,0.304,0.11133333333333334,0.202,0.0033333333333333335,0.008,0.021333333333333333,0.068,0.636,0.4595341325505233,0.9073469773834875,74,False,0.7533333333333333,0.2733333333333333,0.7666666666666667,0.54,12.8,30.4,1085.0,1847.5
76
+ scsemi5nt,C140_3004,covid_negative,1500,3196,150,0.568,0.27252816020025034,0.114,0.3886107634543179,0.18933333333333333,0.12484355444305381,0.06933333333333333,0.13610763454317898,0.051333333333333335,0.07165206508135169,0.008,0.006257822277847309,0.7234075928243637,0.6385203514127898,0.827887791263527,96,False,0.7,0.4666666666666667,0.8733333333333333,0.12,18.933333333333334,12.48435544430538,1086.0,915.5
77
+ scsemi5nt,C140_2801,covid_positive,1500,226,113,0.582,0.26991150442477874,0.162,0.2610619469026549,0.12066666666666667,0.11946902654867257,0.11333333333333333,0.3230088495575221,0.004,0.02654867256637168,0.018,0.0,0.6625722713864308,0.6262991645866398,0.8835168841976535,123,False,0.6460176991150443,0.5663716814159292,0.7964601769911505,0.2920353982300885,12.066666666666666,11.946902654867257,1086.0,1194.0
78
+ scsemi5nt,C140_3001,covid_positive,1500,6088,150,0.48733333333333334,0.12220762155059132,0.11466666666666667,0.2664257555847569,0.224,0.33327858081471745,0.14666666666666667,0.2176412614980289,0.02,0.056504599211563734,0.007333333333333333,0.003942181340341655,0.7370337275514673,0.7956494278822857,0.8979536822498538,52,False,0.7866666666666666,0.47333333333333333,0.7866666666666666,0.20666666666666667,22.400000000000002,33.327858081471746,1086.5,925.0
79
+ scsemi5nt,C140_0202,covid_positive,1500,3567,150,0.5333333333333333,0.2612839921502663,0.112,0.29072049341183065,0.20533333333333334,0.16232127838519764,0.12133333333333333,0.2321278385197645,0.024666666666666667,0.04513596860106532,0.0033333333333333335,0.008410428931875526,0.6301227922624054,0.5339703340264136,0.8854724251547008,45,False,0.8466666666666667,0.4266666666666667,0.8666666666666667,0.29333333333333333,20.533333333333335,16.232127838519762,1086.0,1057.0
80
+ scsemi5nt,C140_0402,covid_positive,1500,1593,150,0.4613333333333333,0.15065913370998116,0.09666666666666666,0.49466415568110483,0.118,0.0696798493408663,0.23133333333333334,0.2542372881355932,0.09,0.025109855618330193,0.0026666666666666666,0.005649717514124294,0.8477689893283115,0.9559604592996818,0.8974059695057793,77,False,0.7666666666666667,0.52,0.8266666666666667,0.3466666666666667,11.799999999999999,6.96798493408663,1086.0,840.0
81
+ scsemi5nt,C140_0602,covid_positive,1500,2196,150,0.5306666666666666,0.13479052823315119,0.11466666666666667,0.28734061930783245,0.20466666666666666,0.31785063752276865,0.12733333333333333,0.16939890710382513,0.02,0.08378870673952642,0.0026666666666666666,0.006830601092896175,0.791752276867031,0.764706775012057,0.8704725799274396,62,False,0.8466666666666667,0.58,0.86,0.22,20.466666666666665,31.785063752276866,1084.0,902.0
82
+ scsemi5nt,C140_0902,covid_positive,1500,2211,150,0.5566666666666666,0.13251922207146088,0.11,0.37403889642695615,0.224,0.2618724559023066,0.08066666666666666,0.182722749886929,0.027333333333333334,0.04296698326549073,0.0013333333333333333,0.005879692446856626,0.8482948891904116,0.7711512046275167,0.8433892916607104,81,False,0.8133333333333334,0.30666666666666664,0.8333333333333334,0.21333333333333335,22.400000000000002,26.187245590230663,1086.5,1221.0
83
+ scsemi5nt,C140_1103,recovery,1500,1468,150,0.544,0.3528610354223433,0.114,0.30040871934604907,0.21133333333333335,0.10422343324250681,0.10733333333333334,0.20299727520435967,0.019333333333333334,0.027929155313351498,0.004,0.011580381471389645,0.5964977293369665,0.4649695607671032,0.8713541819533419,82,False,0.8133333333333334,0.4066666666666667,0.8866666666666667,0.24666666666666667,21.133333333333333,10.422343324250681,1085.0,1276.5
84
+ scsemi5nt,C141_2001,covid_positive,1500,3028,150,0.44733333333333336,0.3543593130779392,0.016,0.014200792602377808,0.104,0.35402906208718626,0.41733333333333333,0.10997357992073976,0.007333333333333333,0.04722589167767503,0.008,0.1202113606340819,0.8042659621312197,0.609444442221954,0.8957567937930387,85,False,0.74,0.54,0.7666666666666667,0.58,10.4,35.402906208718626,1087.0,1203.0
85
+ scsemi5nt,C141_2201,covid_positive,1500,2514,150,0.412,0.37748607796340494,0.015333333333333332,0.07438345266507558,0.124,0.31145584725536996,0.42866666666666664,0.11177406523468576,0.012666666666666666,0.0588703261734288,0.007333333333333333,0.066030230708035,0.7028130469371519,0.43922462169773513,0.9071724069102507,48,False,0.7266666666666667,0.6333333333333333,0.7733333333333333,0.52,12.4,31.145584725536995,1087.0,892.0
86
+ scsemi5nt,C141_3001,covid_positive,1500,1237,150,0.6,0.3556992724333064,0.16266666666666665,0.116410670978173,0.12466666666666666,0.28698464025869036,0.09266666666666666,0.09215844785772029,0.004666666666666667,0.02263540824575586,0.015333333333333332,0.12611156022635409,0.5821298841282672,0.4544442962362094,0.8975524358322605,32,False,0.78,0.36666666666666664,0.8466666666666667,0.4533333333333333,12.466666666666667,28.698464025869036,1087.0,1561.0
87
+ scsemi5nt,C141_0202,covid_positive,1500,1025,150,0.6946666666666667,0.5629268292682926,0.12533333333333332,0.041951219512195125,0.11666666666666667,0.15609756097560976,0.037333333333333336,0.18341463414634146,0.008,0.02048780487804878,0.018,0.0351219512195122,0.43024390243902444,0.22041789156899266,0.8456218661350742,12,False,0.7333333333333333,0.5066666666666667,0.8133333333333334,0.28,11.666666666666666,15.609756097560975,1086.0,1487.0
88
+ scsemi5nt,C142_3004,covid_negative,1500,10903,150,0.6653333333333333,0.5483811794918829,0.014666666666666666,0.10841052921214345,0.072,0.1384022746033202,0.22133333333333333,0.17169586352380078,0.02266666666666667,0.03182610290745666,0.004,0.001284050261395946,0.338611146779174,0.1331379680119099,0.8925007932347289,10,False,0.7866666666666666,0.22,0.8866666666666667,0.47333333333333333,7.199999999999999,13.840227460332018,1087.0,1617.0
89
+ scsemi5nt,C145_3004,covid_negative,1500,743,150,0.574,0.6002691790040376,0.116,0.05787348586810229,0.20266666666666666,0.033647375504710635,0.06733333333333333,0.26648721399730824,0.03666666666666667,0.018842530282637954,0.0033333333333333335,0.02288021534320323,0.4899398833557649,0.4320860863906481,0.846580814294132,76,False,0.76,0.7933333333333333,0.7866666666666666,0.28,20.266666666666666,3.3647375504710633,1086.0,894.0
90
+ scsemi5nt,C145_0701,covid_positive,1500,1110,150,0.43866666666666665,0.3036036036036036,0.017333333333333333,0.26306306306306304,0.098,0.1963963963963964,0.43266666666666664,0.1972972972972973,0.010666666666666666,0.03063063063063063,0.0026666666666666666,0.009009009009009009,0.7408648648648648,0.4007833812668684,0.8984141446017828,57,False,0.7333333333333333,0.5933333333333334,0.7466666666666667,0.4666666666666667,9.8,19.63963963963964,1088.0,848.5
91
+ scsemi5nt,C145_1201,covid_positive,1500,347,150,0.406,0.207492795389049,0.09266666666666666,0.5504322766570605,0.06933333333333333,0.0345821325648415,0.3913333333333333,0.14697406340057637,0.036,0.02881844380403458,0.004666666666666667,0.03170028818443804,0.9695984630163303,0.8996513976004751,0.8784486444508869,137,False,0.8666666666666667,0.4533333333333333,0.8533333333333334,0.4066666666666667,6.933333333333333,3.45821325648415,1085.0,627.0
92
+ scsemi5nt,C145_1401,covid_positive,1500,1060,150,0.44333333333333336,0.2169811320754717,0.043333333333333335,0.2650943396226415,0.122,0.22641509433962265,0.36866666666666664,0.24716981132075472,0.009333333333333334,0.016037735849056604,0.013333333333333334,0.02830188679245283,0.6956981132075472,0.5915789452607205,0.8758450213501935,71,False,0.5866666666666667,0.44,0.48,0.26666666666666666,12.2,22.641509433962266,1087.0,861.0
93
+ scsemi5nt,C145_1901,covid_positive,1500,1173,150,0.8,0.32821824381926684,0.13533333333333333,0.24296675191815856,0.02266666666666667,0.216538789428815,0.019333333333333334,0.16112531969309463,0.019333333333333334,0.0247229326513214,0.0033333333333333335,0.026427962489343565,0.9435635123614664,0.35234559765969414,0.7364294021769148,84,False,0.68,0.5333333333333333,0.8866666666666667,0.29333333333333333,2.2666666666666666,21.653878942881498,1087.0,1148.0
94
+ scsemi5nt,C145_2301,covid_positive,1500,958,150,0.774,0.5198329853862212,0.15133333333333332,0.1638830897703549,0.025333333333333333,0.10334029227557412,0.02666666666666667,0.1826722338204593,0.018666666666666668,0.009394572025052192,0.004,0.020876826722338204,0.5268782185107865,0.19238259566135318,0.8138645246246325,67,False,0.5733333333333334,0.47333333333333333,0.86,0.3333333333333333,2.533333333333333,10.334029227557412,1085.0,1421.0
95
+ scsemi5nt,C146_3004,covid_negative,1500,2608,150,0.5753333333333334,0.7346625766871165,0.014666666666666666,0.049079754601226995,0.224,0.125,0.14133333333333334,0.05253067484662577,0.042,0.03450920245398773,0.0026666666666666666,0.004217791411042945,0.3905869120654396,0.5065809929498488,0.9333715504599703,7,False,0.8066666666666666,0.7533333333333333,0.8866666666666667,0.7533333333333333,22.400000000000002,12.5,1087.0,845.5
96
+ scsemi5nt,C146_1201,covid_positive,1500,3205,150,0.4806666666666667,0.5691107644305772,0.020666666666666667,0.10452418096723869,0.11466666666666667,0.2343213728549142,0.36733333333333335,0.05585023400936037,0.012,0.027769110764430577,0.004666666666666667,0.008424336973478939,0.6229661986479459,0.2830345165409798,0.9138203729230638,20,False,0.86,0.6266666666666667,0.7933333333333333,0.5866666666666667,11.466666666666667,23.432137285491418,1086.0,854.0
97
+ scsemi5nt,C146_1401,covid_positive,1500,1733,150,0.49266666666666664,0.6641661858049625,0.092,0.09001731102135026,0.07666666666666666,0.14945181765724178,0.302,0.06520484708597807,0.034,0.029428736295441432,0.0026666666666666666,0.0017311021350259665,0.48856934025774185,0.35955401104041523,0.9349803264432873,4,False,0.8333333333333334,0.8666666666666667,0.88,0.9,7.666666666666666,14.945181765724177,1086.0,758.0
98
+ scsemi5nt,C146_1601,covid_positive,1500,363,150,0.46266666666666667,0.4573002754820937,0.014666666666666666,0.2975206611570248,0.116,0.06336088154269973,0.39,0.1322314049586777,0.013333333333333334,0.0440771349862259,0.0033333333333333335,0.005509641873278237,0.6315482093663912,0.3740439147783728,0.8847017336580735,117,False,0.84,0.68,0.78,0.52,11.600000000000001,6.336088154269973,1085.0,577.0
99
+ scsemi5nt,C146_1901,covid_positive,1500,2803,150,0.4806666666666667,0.708169818052087,0.043333333333333335,0.13877987870139136,0.116,0.06814127720299679,0.3406666666666667,0.06778451658936853,0.008666666666666666,0.00856225472707813,0.010666666666666666,0.00856225472707813,0.6458993935069568,0.47895356019216834,0.9159322659982869,2,False,0.7533333333333333,0.6533333333333333,0.7533333333333333,0.5266666666666666,11.600000000000001,6.814127720299679,1085.0,820.0
100
+ scsemi5nt,C146_2301,covid_positive,1500,1330,150,0.42533333333333334,0.649624060150376,0.044,0.13458646616541353,0.12333333333333334,0.0518796992481203,0.3913333333333333,0.1443609022556391,0.006666666666666667,0.006015037593984963,0.009333333333333334,0.013533834586466165,0.638155388471178,0.35347521931679055,0.9212716772472006,5,False,0.64,0.49333333333333335,0.76,0.5733333333333334,12.333333333333334,5.18796992481203,1085.0,953.5
101
+ scsemi5nt,C146_2701,covid_positive,1500,1109,150,0.7806666666666666,0.4211000901713255,0.13266666666666665,0.16050495942290352,0.04,0.3155996393146979,0.02666666666666667,0.06492335437330929,0.014,0.019837691614066726,0.006,0.018034265103697024,0.7191331529906823,0.3559145979795056,0.8658890873258623,90,False,0.6133333333333333,0.26666666666666666,0.86,0.28,4.0,31.55996393146979,1086.0,1485.0
102
+ scsemi5nt,C146_2502,recovery,1500,5129,150,0.5726666666666667,0.71475921232209,0.014,0.04679274712419575,0.21333333333333335,0.14837200233963735,0.15,0.06336517839734841,0.044,0.01852212906999415,0.006,0.008188730746734256,0.35414804705270686,0.46074006407467033,0.9458257970989946,3,False,0.8133333333333334,0.5933333333333334,0.8666666666666667,0.78,21.333333333333336,14.837200233963735,1086.0,1290.0
103
+ scsemi5nt,C147_3004,covid_negative,1500,2048,150,0.578,0.59375,0.11533333333333333,0.1328125,0.21133333333333335,0.109375,0.058,0.1259765625,0.03,0.0322265625,0.007333333333333333,0.005859375,0.2068645833333334,0.2252631211530846,0.8370968308224201,51,False,0.7533333333333333,0.6,0.7933333333333333,0.3,21.133333333333333,10.9375,1087.0,1014.0
104
+ scsemi5nt,C147_1401,covid_positive,1500,2973,150,0.5626666666666666,0.2263706693575513,0.16533333333333333,0.2472250252270434,0.128,0.3871510258997645,0.12333333333333334,0.110326269761184,0.004,0.02119071644803229,0.016666666666666666,0.007736293306424487,0.7164668684830138,0.6746563259960143,0.8883534675838113,103,False,0.7733333333333333,0.5266666666666666,0.8,0.22,12.8,38.71510258997645,1086.0,1017.0
105
+ scsemi5nt,C147_1901,covid_positive,1500,3691,150,0.5893333333333334,0.42021132484421564,0.16533333333333333,0.24735843944730426,0.12866666666666668,0.04958005960444324,0.104,0.21376320780276348,0.0013333333333333333,0.006502302898943376,0.011333333333333334,0.06258466540232999,0.4964172311026823,0.4478029938438064,0.8782705835220188,70,False,0.76,0.6733333333333333,0.8333333333333334,0.22,12.866666666666667,4.958005960444324,1085.0,844.0
106
+ scsemi5nt,C161_1105,covid_negative,1500,820,150,0.23533333333333334,0.6743902439024391,0.10866666666666666,0.06341463414634146,0.258,0.20853658536585365,0.3506666666666667,0.00975609756097561,0.009333333333333334,0.03902439024390244,0.038,0.004878048780487805,0.9374959349593497,0.4502160694501434,0.9037021600233913,110,False,0.6333333333333333,0.2,0.6933333333333334,0.54,25.8,20.853658536585364,1085.0,1665.0
107
+ scsemi5nt,C164_1105,covid_negative,1500,5983,150,0.5773333333333334,0.8880160454621427,0.019333333333333334,0.018051144910579978,0.22066666666666668,0.04579642319906402,0.13466666666666666,0.03359518636135718,0.04466666666666667,0.010864114992478689,0.0033333333333333335,0.0036770850743774027,0.6220529277397069,0.7982374954865337,0.9425722968180213,8,False,0.8866666666666667,0.49333333333333335,0.9066666666666666,0.7466666666666667,22.066666666666666,4.579642319906402,1086.0,1565.0
108
+ scsemi5nt,C167_1205,covid_negative,1500,9978,150,0.5546666666666666,0.7162758067749048,0.012,0.03487672880336741,0.21933333333333332,0.08819402685909,0.16933333333333334,0.149929845660453,0.04066666666666666,0.008719182200841852,0.004,0.0020044097013429546,0.3689717378232111,0.4523381415108289,0.9345300817515337,8,False,0.9066666666666666,0.42,0.9066666666666666,0.6933333333333334,21.933333333333334,8.819402685909001,1084.0,1452.0
109
+ scsemi5nt,C168_1205,covid_negative,1500,2323,150,0.5366666666666666,0.49978476108480413,0.10533333333333333,0.05337925096857512,0.214,0.21437795953508396,0.11666666666666667,0.16272061988807576,0.022,0.06371071889797675,0.005333333333333333,0.006026689625484288,0.17767197589324146,0.15733487198607096,0.8924990565205084,11,False,0.8866666666666667,0.7,0.9066666666666666,0.47333333333333333,21.4,21.437795953508395,1083.5,781.0
110
+ scsemi5nt,C168_2001,covid_positive,1500,2751,150,0.558,0.3300617957106507,0.172,0.31842966194111233,0.12533333333333332,0.18684114867320975,0.12266666666666666,0.11959287531806616,0.0026666666666666666,0.03744093057070156,0.019333333333333334,0.007633587786259542,0.4854234823700473,0.43695328400941197,0.906783556407962,44,False,0.7866666666666666,0.4,0.82,0.21333333333333335,12.533333333333333,18.684114867320975,1085.5,945.0
111
+ scsemi5nt,C168_2301,covid_positive,1500,901,150,0.4493333333333333,0.42730299667036625,0.09533333333333334,0.19200887902330743,0.07333333333333333,0.051054384017758046,0.34,0.2885682574916759,0.04,0.03551609322974473,0.002,0.005549389567147614,0.20044987051424346,0.4018007059848499,0.9402926048378439,6,False,0.8866666666666667,0.66,0.9333333333333333,0.68,7.333333333333333,5.105438401775805,1088.0,853.0
112
+ scsemi5nt,C168_3001,covid_positive,1500,1160,150,0.5093333333333333,0.3931034482758621,0.10666666666666667,0.10775862068965517,0.21866666666666668,0.28706896551724137,0.142,0.1310344827586207,0.015333333333333332,0.06810344827586207,0.008,0.01293103448275862,0.2543908045977011,0.30574193059837124,0.916041211442667,30,False,0.8666666666666667,0.5666666666666667,0.8866666666666667,0.44,21.866666666666667,28.706896551724135,1087.0,837.0
113
+ scsemi5nt,C168_0202,covid_positive,1500,651,150,0.516,0.2903225806451613,0.108,0.18125960061443933,0.218,0.3302611367127496,0.13666666666666666,0.09984639016897082,0.018,0.09831029185867896,0.0033333333333333335,0.0,0.5316620583717357,0.5711918600111004,0.8881731489201249,95,False,0.88,0.48,0.9266666666666666,0.26666666666666666,21.8,33.026113671274956,1086.0,670.0
114
+ scsemi5nt,C168_0403,recovery,1500,2526,150,0.498,0.29493269992082344,0.118,0.08036421219319081,0.22666666666666666,0.4398258115597783,0.13333333333333333,0.1421219319081552,0.020666666666666667,0.0344418052256532,0.0033333333333333335,0.00831353919239905,0.48140617577197153,0.5439323365830273,0.9066653616654241,27,False,0.8533333333333334,0.56,0.8733333333333333,0.43333333333333335,22.666666666666664,43.982581155977826,1085.0,1080.0
115
+ scsemi5nt,C169_1205,covid_negative,1500,1252,150,0.808,0.444888178913738,0.09333333333333334,0.11421725239616613,0.034666666666666665,0.15175718849840256,0.025333333333333333,0.2340255591054313,0.032,0.031150159744408944,0.006666666666666667,0.023961661341853034,0.7279233226837062,0.1628721939164842,0.7120009092426032,70,False,0.47333333333333333,0.7666666666666667,0.94,0.2733333333333333,3.4666666666666663,15.175718849840255,1085.0,1000.0
116
+ scsemi5nt,C169_2001,covid_positive,1500,755,150,0.5666666666666667,0.5814569536423841,0.16933333333333334,0.1827814569536424,0.132,0.052980132450331126,0.10933333333333334,0.14437086092715232,0.004666666666666667,0.030463576158940398,0.018,0.007947019867549669,0.17814569536423847,0.3005595154237766,0.8871931547661596,61,False,0.6266666666666667,0.5666666666666667,0.72,0.2866666666666667,13.200000000000001,5.298013245033113,1086.0,586.0
117
+ scsemi5nt,C169_2301,covid_positive,1500,3773,150,0.4613333333333333,0.5139146567717996,0.09333333333333334,0.08666843360720912,0.06866666666666667,0.04320169626292075,0.3353333333333333,0.31221839385104694,0.03866666666666667,0.028624436787702094,0.0026666666666666666,0.015372382719321495,0.1305740789822422,0.34787736782091533,0.9365055360816494,1,True,0.9133333333333333,0.78,0.8866666666666667,0.6933333333333334,6.866666666666667,4.320169626292075,1087.5,886.0
118
+ scsemi5nt,C169_0202,covid_positive,1500,1286,150,0.634,0.5256609642301711,0.012666666666666666,0.14774494556765164,0.07666666666666666,0.14074650077760498,0.25133333333333335,0.12052877138413685,0.022,0.04821150855365474,0.0033333333333333335,0.017107309486780714,0.47828719543805087,0.15723016260325706,0.9073189393590907,21,False,0.8,0.7533333333333333,0.8933333333333333,0.6066666666666667,7.666666666666666,14.074650077760499,1086.0,841.0
119
+ scsemi5nt,C169_0403,recovery,1500,4368,150,0.662,0.5057234432234432,0.016,0.1201923076923077,0.059333333333333335,0.12248168498168498,0.23333333333333334,0.21268315018315018,0.024666666666666667,0.023351648351648352,0.004666666666666667,0.015567765567765568,0.35648351648351656,0.13281521908529717,0.9122027968972533,17,False,0.84,0.6,0.94,0.5133333333333333,5.933333333333334,12.248168498168498,1087.0,992.0
120
+ scsemi5nt,C187_2605,covid_negative,1500,1867,150,0.7713333333333333,0.129084092126406,0.12533333333333332,0.04124263524370648,0.032,0.5243706480985538,0.044,0.11355115158007499,0.020666666666666667,0.17621853240492769,0.006666666666666667,0.015532940546331012,1.4526798785931083,0.9980299651774706,0.849096985731762,108,False,0.58,0.6533333333333333,0.82,0.32666666666666666,3.2,52.437064809855386,1087.0,783.0
121
+ scsemi5nt,C187_1201,covid_positive,1500,1985,150,0.37933333333333336,0.05994962216624685,0.012666666666666666,0.02518891687657431,0.118,0.23425692695214106,0.474,0.6392947103274559,0.010666666666666666,0.031234256926952142,0.005333333333333333,0.010075566750629723,0.6387674223341729,1.1059285246361366,0.938192804252688,9,False,0.78,0.7666666666666667,0.72,0.64,11.799999999999999,23.425692695214106,1084.5,706.0
122
+ scsemi5nt,C187_1401,covid_positive,1500,3155,150,0.38266666666666665,0.10998415213946117,0.016,0.041521394611727415,0.11933333333333333,0.22060221870047544,0.4666666666666667,0.5670364500792393,0.008666666666666666,0.04659270998415214,0.006666666666666667,0.014263074484944533,0.545365029054411,0.9648194937507721,0.9380925971083907,5,False,0.78,0.7466666666666667,0.7266666666666667,0.72,11.933333333333334,22.060221870047545,1088.0,671.0
123
+ scsemi5nt,C187_1901,covid_positive,1500,1966,150,0.5393333333333333,0.08748728382502544,0.174,0.07019328585961343,0.13133333333333333,0.1958290946083418,0.126,0.5635808748728383,0.0013333333333333333,0.049338758901322485,0.028,0.0335707019328586,1.1113055272973889,0.9509675223578019,0.9234719804321087,11,False,0.62,0.6866666666666666,0.6666666666666666,0.4,13.133333333333333,19.58290946083418,1084.5,904.5
124
+ scsemi5nt,C187_2301,covid_positive,1500,529,150,0.5686666666666667,0.16446124763705103,0.15733333333333333,0.17391304347826086,0.12266666666666666,0.06994328922495274,0.13,0.5311909262759924,0.004,0.03780718336483932,0.017333333333333333,0.022684310018903593,0.9138575929426591,0.8904081689675525,0.8824620844003922,115,False,0.8,0.72,0.8466666666666667,0.44,12.266666666666666,6.994328922495274,1086.0,695.0
125
+ scsemi5nt,C187_2502,recovery,1500,5693,150,0.5866666666666667,0.284559985947655,0.16733333333333333,0.018443702792903565,0.118,0.2466186544879677,0.106,0.39030388196030213,0.004,0.04268399789214825,0.018,0.017389776919023364,0.9032130686808362,0.6603212842459626,0.8791959037641777,13,False,0.7666666666666667,0.6266666666666667,0.86,0.32666666666666666,11.799999999999999,24.661865448796767,1085.0,985.0
126
+ scsemi5nt,C190_2605,covid_negative,1500,1791,150,0.5553333333333333,0.04578447794528197,0.17533333333333334,0.0893355667225014,0.128,0.4712451144611949,0.11266666666666666,0.3405918481295366,0.005333333333333333,0.0413176996091569,0.023333333333333334,0.011725293132328308,1.2143093243997767,1.0035664674336382,0.8859888384079373,34,False,0.84,0.4066666666666667,0.84,0.3933333333333333,12.8,47.124511446119485,1086.0,1186.0
127
+ scsemi5nt,C190_2901,covid_positive,1500,1527,150,0.48133333333333334,0.0412573673870334,0.112,0.3798297314996726,0.23,0.3700065487884741,0.15133333333333332,0.16110019646365423,0.018666666666666668,0.04191224623444663,0.006666666666666667,0.005893909626719057,0.8816974459724951,0.9740680872969392,0.881615941842453,101,False,0.7533333333333333,0.2866666666666667,0.7666666666666667,0.25333333333333335,23.0,37.00065487884741,1086.0,1198.0
128
+ scsemi5nt,C190_0102,covid_positive,1500,4868,150,0.524,0.03594905505341003,0.10533333333333333,0.3769515201314708,0.224,0.33340180772391126,0.12133333333333333,0.20336894001643385,0.019333333333333334,0.042317173377156944,0.006,0.00801150369761709,0.9761018898931799,0.9777651397756887,0.8897565798553931,52,False,0.8466666666666667,0.3933333333333333,0.86,0.4066666666666667,22.400000000000002,33.34018077239113,1087.0,1038.0
129
+ scsemi5nt,C190_0302,covid_positive,1500,2220,150,0.5546666666666666,0.11576576576576576,0.108,0.3342342342342342,0.21,0.3045045045045045,0.09666666666666666,0.20315315315315316,0.023333333333333334,0.03333333333333333,0.007333333333333333,0.009009009009009009,0.8778018018018019,0.8161367077281934,0.8561660055865926,76,False,0.82,0.44666666666666666,0.8866666666666667,0.32666666666666666,21.0,30.45045045045045,1084.0,1175.5
130
+ scsemi5nt,C190_0502,covid_positive,1500,2030,150,0.5053333333333333,0.05172413793103448,0.11266666666666666,0.24778325123152709,0.22066666666666668,0.5167487684729064,0.13333333333333333,0.10541871921182266,0.020666666666666667,0.07389162561576355,0.007333333333333333,0.004433497536945813,0.968847290640394,1.0674183248921467,0.8802956325228296,84,False,0.9266666666666666,0.44,0.88,0.35333333333333333,22.066666666666666,51.67487684729064,1085.0,799.0
131
+ scsemi5nt,C190_0802,covid_positive,1500,1447,150,0.5046666666666667,0.038700760193503804,0.106,0.2156185210780926,0.22066666666666668,0.5929509329647547,0.142,0.0912232204561161,0.018,0.05459571527297857,0.008666666666666666,0.006910850034554251,1.0369970052983184,1.116901372883404,0.8889686470602404,104,False,0.86,0.3333333333333333,0.88,0.32,22.066666666666666,59.295093296475464,1086.0,854.0
132
+ scsemi5nt,C190_1002,covid_positive,1500,4052,150,0.512,0.044669299111549855,0.10066666666666667,0.12043435340572557,0.218,0.6414116485686081,0.14,0.12709772951628825,0.02,0.06071076011846002,0.009333333333333334,0.005676209279368213,0.967780190852254,1.03568455843734,0.9110940105852837,47,False,0.8333333333333334,0.5333333333333333,0.8866666666666667,0.4533333333333333,21.8,64.14116485686081,1087.0,994.0
133
+ scsemi5nt,C190_0903,recovery,1500,1371,150,0.5593333333333333,0.0962800875273523,0.17066666666666666,0.24288840262582057,0.122,0.4062727935813275,0.11666666666666667,0.1560904449307075,0.0033333333333333335,0.07221006564551423,0.028,0.0262582056892779,0.9295900802334064,0.8548296582894102,0.8906486729507617,35,False,0.7866666666666666,0.6133333333333333,0.8933333333333333,0.5666666666666667,12.2,40.62727935813275,1086.0,998.0
134
+ scsemi5nt,C193_2605,covid_negative,1500,5566,150,0.5573333333333333,0.40837226015091627,0.09866666666666667,0.03557312252964427,0.21933333333333332,0.34441250449155586,0.09466666666666666,0.17714696370822852,0.024666666666666667,0.02982393100970176,0.005333333333333333,0.004671218109953288,0.425433465085639,0.36821325684791817,0.8928963155033524,5,False,0.8,0.3333333333333333,0.9066666666666666,0.6266666666666667,21.933333333333334,34.44125044915559,1086.0,2119.5
135
+ scsemi5nt,C195_2605,covid_negative,1500,7759,150,0.568,0.5532929501224385,0.013333333333333334,0.038407011212785155,0.21,0.08815569016625854,0.15933333333333333,0.3107359195772651,0.046,0.008248485629591443,0.0033333333333333335,0.0011599432916612965,0.3529525282467671,0.42150604715340445,0.9436716499167882,1,True,0.88,0.5,0.8733333333333333,0.8533333333333334,21.0,8.815569016625854,1086.0,1513.0
136
+ scsemi5nt,C197_2605,covid_negative,1500,2835,150,0.798,0.6052910052910053,0.08733333333333333,0.13015873015873017,0.05533333333333333,0.1347442680776014,0.042,0.08677248677248678,0.011333333333333334,0.01869488536155203,0.006,0.02433862433862434,0.38541798941798944,0.26098244063521137,0.8155870182868167,20,False,0.5866666666666667,0.2866666666666667,0.8,0.5,5.533333333333333,13.474426807760139,1086.0,1812.0
137
+ scsemi5nt,C212_2705,covid_negative,1500,1150,150,0.5173333333333333,0.5417391304347826,0.10866666666666666,0.0817391304347826,0.228,0.15478260869565216,0.118,0.18869565217391304,0.021333333333333333,0.026956521739130435,0.006666666666666667,0.00608695652173913,0.20144927536231885,0.15243626611095185,0.9036910862272356,12,False,0.86,0.21333333333333335,0.9,0.7266666666666667,22.8,15.478260869565217,1084.0,1861.5
138
+ scsemi5nt,C214_2705,covid_negative,1500,6279,150,0.532,0.3494186972447842,0.11,0.08138238573021182,0.21866666666666668,0.3817486860965122,0.10933333333333334,0.14667940754897277,0.026,0.03567447045707915,0.004,0.005096352922439879,0.4223978340500079,0.42435577816087855,0.8847228510864568,16,False,0.86,0.24,0.8933333333333333,0.38666666666666666,21.866666666666667,38.17486860965122,1085.0,1795.0
139
+ scsemi5nt,C234_2805,covid_negative,1500,9882,150,0.776,0.609492005666869,0.098,0.08429467719085205,0.05,0.16636308439587127,0.06066666666666667,0.12001619105444242,0.01,0.016798218984011334,0.005333333333333333,0.0030358227079538553,0.3650216555353168,0.23726654209605264,0.874569151924319,1,True,0.5733333333333334,0.30666666666666664,0.8866666666666667,0.5666666666666667,5.0,16.63630843958713,1088.0,1650.0
140
+ scsemi5nt,C237_2805,covid_negative,1500,5071,150,0.744,0.5912048905541314,0.15,0.08913429303884836,0.034,0.15519621376454348,0.034666666666666665,0.14789982252021297,0.02,0.014198382961940446,0.017333333333333333,0.0023663971603234074,0.4688587392361795,0.20043474686898952,0.9132537782306711,11,False,0.4533333333333333,0.4866666666666667,0.7533333333333333,0.5733333333333334,3.4000000000000004,15.519621376454348,1085.0,1379.0
141
+ scsemi5nt,C238_2905,covid_negative,1500,7843,150,0.8493333333333334,0.8912405967104424,0.07133333333333333,0.034298100216753794,0.014666666666666666,0.03735815376769094,0.05333333333333334,0.023842917251051893,0.009333333333333334,0.010455182965701899,0.002,0.002805049088359046,0.1330512983977219,0.8047320141978977,0.895318149926708,2,False,0.5933333333333334,0.20666666666666667,0.9133333333333333,0.4666666666666667,1.4666666666666666,3.735815376769094,1086.5,1738.0
142
+ scsemi5nt,C240_2905,covid_negative,1500,2346,150,0.492,0.5524296675191815,0.106,0.03836317135549872,0.23333333333333334,0.20588235294117646,0.14533333333333334,0.18584825234441602,0.018666666666666668,0.014919011082693947,0.004666666666666667,0.0025575447570332483,0.2018891730605285,0.22906512638272097,0.9080111589713721,26,False,0.82,0.29333333333333333,0.9,0.6133333333333333,23.333333333333332,20.588235294117645,1086.0,1652.5
143
+ scsemi5nt,C246_2905,covid_negative,1500,769,150,0.5446666666666666,0.7451235370611183,0.018,0.013003901170351105,0.222,0.08972691807542263,0.17333333333333334,0.13394018205461639,0.038,0.015604681404421327,0.004,0.002600780234070221,0.40091374078890335,0.5104399081436252,0.9442706107329586,11,False,0.92,0.4866666666666667,0.94,0.7666666666666667,22.2,8.972691807542263,1085.0,1382.0
144
+ scsemi5nt,C251_2905,covid_negative,1500,2117,150,0.5693333333333334,0.8304204062352385,0.10733333333333334,0.07510628247520075,0.212,0.03306565895134624,0.07533333333333334,0.05054322153991497,0.028666666666666667,0.007085498346717053,0.007333333333333333,0.003778932451582428,0.5221741458038103,0.6822350108464306,0.8598225460060501,82,False,0.8733333333333333,0.17333333333333334,0.9066666666666666,0.64,21.2,3.306565895134624,1086.0,2293.0
paper-releases/pbisc-diffusion/updates/20261003T174003Z-scsemi-readout-sensitivity/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/fewshot_n5/draw4_scsemi5nt/summary.json ADDED
@@ -0,0 +1,1007 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema": "paired_ft_scores.v1",
3
+ "dataset": "imperial_eskd",
4
+ "written_utc": "2026-10-03T17:36:28.759373+00:00",
5
+ "command": [
6
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
7
+ "--dataset",
8
+ "imperial_eskd",
9
+ "--out",
10
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/fewshot_n5/draw4_scsemi5nt",
11
+ "--threads",
12
+ "6",
13
+ "--donors",
14
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/imperial_eskd/fewshot_n5/draw4/test_samples.txt",
15
+ "--case-groups",
16
+ "covid_positive",
17
+ "--control-groups",
18
+ "covid_negative",
19
+ "--arm",
20
+ "scsemi5nt=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/imperial_eskd/fewshot_n5/draw4/scsemi5nt__raw.npz"
21
+ ],
22
+ "arms": [
23
+ "scsemi5nt"
24
+ ],
25
+ "donors": [
26
+ "C20_1004",
27
+ "C20_1404",
28
+ "C21_1004",
29
+ "C21_1704",
30
+ "C21_2504",
31
+ "C23_2204",
32
+ "C31_1304",
33
+ "C31_2004",
34
+ "C31_2704",
35
+ "C34_1404",
36
+ "C34_2104",
37
+ "C34_2504",
38
+ "C40_1504",
39
+ "C40_2204",
40
+ "C40_0105",
41
+ "C42_1504",
42
+ "C42_2204",
43
+ "C42_2704",
44
+ "C58_1604",
45
+ "C58_2501",
46
+ "C58_2901",
47
+ "C58_0102",
48
+ "C58_0402",
49
+ "C58_1003",
50
+ "C60_2504",
51
+ "C63_1704",
52
+ "C63_2404",
53
+ "C63_2904",
54
+ "C65_1704",
55
+ "C65_2104",
56
+ "C65_2504",
57
+ "C69_1804",
58
+ "C82_2504",
59
+ "C85_2004",
60
+ "C93_2104",
61
+ "C93_2704",
62
+ "C93_0405",
63
+ "C101_0601",
64
+ "C101_1101",
65
+ "C101_1301",
66
+ "C101_1801",
67
+ "C101_2001",
68
+ "C101_2502",
69
+ "C103_2204",
70
+ "C104_2204",
71
+ "C106_2204",
72
+ "C108_2204",
73
+ "C108_1501",
74
+ "C108_1801",
75
+ "C108_2201",
76
+ "C113_0605",
77
+ "C123_2404",
78
+ "C123_2904",
79
+ "C123_0505",
80
+ "C124_2404",
81
+ "C124_2704",
82
+ "C124_0105",
83
+ "C126_2504",
84
+ "C126_3004",
85
+ "C126_0605",
86
+ "C127_2504",
87
+ "C127_0405",
88
+ "C127_1105",
89
+ "C128_2504",
90
+ "C128_0405",
91
+ "C128_1105",
92
+ "C132_2804",
93
+ "C132_0205",
94
+ "C132_1105",
95
+ "C138_3004",
96
+ "C138_2301",
97
+ "C138_3001",
98
+ "C138_0202",
99
+ "C138_0402",
100
+ "C140_3004",
101
+ "C140_2801",
102
+ "C140_3001",
103
+ "C140_0202",
104
+ "C140_0402",
105
+ "C140_0602",
106
+ "C140_0902",
107
+ "C140_1103",
108
+ "C141_2001",
109
+ "C141_2201",
110
+ "C141_3001",
111
+ "C141_0202",
112
+ "C142_3004",
113
+ "C145_3004",
114
+ "C145_0701",
115
+ "C145_1201",
116
+ "C145_1401",
117
+ "C145_1901",
118
+ "C145_2301",
119
+ "C146_3004",
120
+ "C146_1201",
121
+ "C146_1401",
122
+ "C146_1601",
123
+ "C146_1901",
124
+ "C146_2301",
125
+ "C146_2701",
126
+ "C146_2502",
127
+ "C147_3004",
128
+ "C147_1401",
129
+ "C147_1901",
130
+ "C161_1105",
131
+ "C164_1105",
132
+ "C167_1205",
133
+ "C168_1205",
134
+ "C168_2001",
135
+ "C168_2301",
136
+ "C168_3001",
137
+ "C168_0202",
138
+ "C168_0403",
139
+ "C169_1205",
140
+ "C169_2001",
141
+ "C169_2301",
142
+ "C169_0202",
143
+ "C169_0403",
144
+ "C187_2605",
145
+ "C187_1201",
146
+ "C187_1401",
147
+ "C187_1901",
148
+ "C187_2301",
149
+ "C187_2502",
150
+ "C190_2605",
151
+ "C190_2901",
152
+ "C190_0102",
153
+ "C190_0302",
154
+ "C190_0502",
155
+ "C190_0802",
156
+ "C190_1002",
157
+ "C190_0903",
158
+ "C193_2605",
159
+ "C195_2605",
160
+ "C197_2605",
161
+ "C212_2705",
162
+ "C214_2705",
163
+ "C234_2805",
164
+ "C237_2805",
165
+ "C238_2905",
166
+ "C240_2905",
167
+ "C246_2905",
168
+ "C251_2905"
169
+ ],
170
+ "n_donors": 143,
171
+ "reference": {
172
+ "cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/imperial_eskd",
173
+ "reference_sha256": "34b4caa3f8a60b46d5faf58f09cdaa5622bcce19e4c45d9902a711fead96375e",
174
+ "features_sha256": "e46e5bb1a24eae045efe75125d20e3accaa8f68a1006eb2f60d24159013d4aa7",
175
+ "n_r1_cells": 21382,
176
+ "pca": {
177
+ "n_components": 50,
178
+ "explained_variance_ratio_sum": 0.2627490162849426,
179
+ "n_fit_cells": 21382
180
+ },
181
+ "r2_control": {
182
+ "precision": 0.9695538303245721,
183
+ "coverage": 0.9998129267608269,
184
+ "density": 1.2846272565709476,
185
+ "n_query": 21382,
186
+ "depth_matched": {
187
+ "precision": 0.9684313908895332,
188
+ "coverage": 0.999672621831447,
189
+ "density": 1.2835141707978672
190
+ }
191
+ },
192
+ "observed_l1_loo_null_mean": 0.5095285177538514
193
+ },
194
+ "contrast_definition": {
195
+ "enabled": true,
196
+ "rule": "explicit --case-groups / --control-groups",
197
+ "group_source": "features groups",
198
+ "case_groups": [
199
+ "covid_positive"
200
+ ],
201
+ "control_groups": [
202
+ "covid_negative"
203
+ ],
204
+ "n_case_donors": 104,
205
+ "n_control_donors": 31,
206
+ "n_donors_in_neither": 8,
207
+ "case": [
208
+ true,
209
+ true,
210
+ true,
211
+ true,
212
+ true,
213
+ true,
214
+ true,
215
+ true,
216
+ true,
217
+ true,
218
+ true,
219
+ true,
220
+ true,
221
+ true,
222
+ true,
223
+ true,
224
+ true,
225
+ true,
226
+ false,
227
+ true,
228
+ true,
229
+ true,
230
+ true,
231
+ false,
232
+ true,
233
+ true,
234
+ true,
235
+ true,
236
+ true,
237
+ true,
238
+ true,
239
+ false,
240
+ true,
241
+ false,
242
+ true,
243
+ true,
244
+ true,
245
+ true,
246
+ true,
247
+ true,
248
+ true,
249
+ true,
250
+ false,
251
+ false,
252
+ false,
253
+ false,
254
+ false,
255
+ true,
256
+ true,
257
+ true,
258
+ true,
259
+ true,
260
+ true,
261
+ true,
262
+ true,
263
+ true,
264
+ true,
265
+ true,
266
+ true,
267
+ true,
268
+ true,
269
+ true,
270
+ true,
271
+ true,
272
+ true,
273
+ true,
274
+ true,
275
+ true,
276
+ true,
277
+ false,
278
+ true,
279
+ true,
280
+ true,
281
+ true,
282
+ false,
283
+ true,
284
+ true,
285
+ true,
286
+ true,
287
+ true,
288
+ true,
289
+ false,
290
+ true,
291
+ true,
292
+ true,
293
+ true,
294
+ false,
295
+ false,
296
+ true,
297
+ true,
298
+ true,
299
+ true,
300
+ true,
301
+ false,
302
+ true,
303
+ true,
304
+ true,
305
+ true,
306
+ true,
307
+ true,
308
+ false,
309
+ false,
310
+ true,
311
+ true,
312
+ false,
313
+ false,
314
+ false,
315
+ false,
316
+ true,
317
+ true,
318
+ true,
319
+ true,
320
+ false,
321
+ false,
322
+ true,
323
+ true,
324
+ true,
325
+ false,
326
+ false,
327
+ true,
328
+ true,
329
+ true,
330
+ true,
331
+ false,
332
+ false,
333
+ true,
334
+ true,
335
+ true,
336
+ true,
337
+ true,
338
+ true,
339
+ false,
340
+ false,
341
+ false,
342
+ false,
343
+ false,
344
+ false,
345
+ false,
346
+ false,
347
+ false,
348
+ false,
349
+ false,
350
+ false
351
+ ],
352
+ "ctrl": [
353
+ false,
354
+ false,
355
+ false,
356
+ false,
357
+ false,
358
+ false,
359
+ false,
360
+ false,
361
+ false,
362
+ false,
363
+ false,
364
+ false,
365
+ false,
366
+ false,
367
+ false,
368
+ false,
369
+ false,
370
+ false,
371
+ true,
372
+ false,
373
+ false,
374
+ false,
375
+ false,
376
+ false,
377
+ false,
378
+ false,
379
+ false,
380
+ false,
381
+ false,
382
+ false,
383
+ false,
384
+ true,
385
+ false,
386
+ true,
387
+ false,
388
+ false,
389
+ false,
390
+ false,
391
+ false,
392
+ false,
393
+ false,
394
+ false,
395
+ false,
396
+ true,
397
+ true,
398
+ true,
399
+ true,
400
+ false,
401
+ false,
402
+ false,
403
+ false,
404
+ false,
405
+ false,
406
+ false,
407
+ false,
408
+ false,
409
+ false,
410
+ false,
411
+ false,
412
+ false,
413
+ false,
414
+ false,
415
+ false,
416
+ false,
417
+ false,
418
+ false,
419
+ false,
420
+ false,
421
+ false,
422
+ true,
423
+ false,
424
+ false,
425
+ false,
426
+ false,
427
+ true,
428
+ false,
429
+ false,
430
+ false,
431
+ false,
432
+ false,
433
+ false,
434
+ false,
435
+ false,
436
+ false,
437
+ false,
438
+ false,
439
+ true,
440
+ true,
441
+ false,
442
+ false,
443
+ false,
444
+ false,
445
+ false,
446
+ true,
447
+ false,
448
+ false,
449
+ false,
450
+ false,
451
+ false,
452
+ false,
453
+ false,
454
+ true,
455
+ false,
456
+ false,
457
+ true,
458
+ true,
459
+ true,
460
+ true,
461
+ false,
462
+ false,
463
+ false,
464
+ false,
465
+ false,
466
+ true,
467
+ false,
468
+ false,
469
+ false,
470
+ false,
471
+ true,
472
+ false,
473
+ false,
474
+ false,
475
+ false,
476
+ false,
477
+ true,
478
+ false,
479
+ false,
480
+ false,
481
+ false,
482
+ false,
483
+ false,
484
+ false,
485
+ true,
486
+ true,
487
+ true,
488
+ true,
489
+ true,
490
+ true,
491
+ true,
492
+ true,
493
+ true,
494
+ true,
495
+ true
496
+ ],
497
+ "groups": [
498
+ "covid_positive",
499
+ "covid_positive",
500
+ "covid_positive",
501
+ "covid_positive",
502
+ "covid_positive",
503
+ "covid_positive",
504
+ "covid_positive",
505
+ "covid_positive",
506
+ "covid_positive",
507
+ "covid_positive",
508
+ "covid_positive",
509
+ "covid_positive",
510
+ "covid_positive",
511
+ "covid_positive",
512
+ "covid_positive",
513
+ "covid_positive",
514
+ "covid_positive",
515
+ "covid_positive",
516
+ "covid_negative",
517
+ "covid_positive",
518
+ "covid_positive",
519
+ "covid_positive",
520
+ "covid_positive",
521
+ "recovery",
522
+ "covid_positive",
523
+ "covid_positive",
524
+ "covid_positive",
525
+ "covid_positive",
526
+ "covid_positive",
527
+ "covid_positive",
528
+ "covid_positive",
529
+ "covid_negative",
530
+ "covid_positive",
531
+ "covid_negative",
532
+ "covid_positive",
533
+ "covid_positive",
534
+ "covid_positive",
535
+ "covid_positive",
536
+ "covid_positive",
537
+ "covid_positive",
538
+ "covid_positive",
539
+ "covid_positive",
540
+ "recovery",
541
+ "covid_negative",
542
+ "covid_negative",
543
+ "covid_negative",
544
+ "covid_negative",
545
+ "covid_positive",
546
+ "covid_positive",
547
+ "covid_positive",
548
+ "covid_positive",
549
+ "covid_positive",
550
+ "covid_positive",
551
+ "covid_positive",
552
+ "covid_positive",
553
+ "covid_positive",
554
+ "covid_positive",
555
+ "covid_positive",
556
+ "covid_positive",
557
+ "covid_positive",
558
+ "covid_positive",
559
+ "covid_positive",
560
+ "covid_positive",
561
+ "covid_positive",
562
+ "covid_positive",
563
+ "covid_positive",
564
+ "covid_positive",
565
+ "covid_positive",
566
+ "covid_positive",
567
+ "covid_negative",
568
+ "covid_positive",
569
+ "covid_positive",
570
+ "covid_positive",
571
+ "covid_positive",
572
+ "covid_negative",
573
+ "covid_positive",
574
+ "covid_positive",
575
+ "covid_positive",
576
+ "covid_positive",
577
+ "covid_positive",
578
+ "covid_positive",
579
+ "recovery",
580
+ "covid_positive",
581
+ "covid_positive",
582
+ "covid_positive",
583
+ "covid_positive",
584
+ "covid_negative",
585
+ "covid_negative",
586
+ "covid_positive",
587
+ "covid_positive",
588
+ "covid_positive",
589
+ "covid_positive",
590
+ "covid_positive",
591
+ "covid_negative",
592
+ "covid_positive",
593
+ "covid_positive",
594
+ "covid_positive",
595
+ "covid_positive",
596
+ "covid_positive",
597
+ "covid_positive",
598
+ "recovery",
599
+ "covid_negative",
600
+ "covid_positive",
601
+ "covid_positive",
602
+ "covid_negative",
603
+ "covid_negative",
604
+ "covid_negative",
605
+ "covid_negative",
606
+ "covid_positive",
607
+ "covid_positive",
608
+ "covid_positive",
609
+ "covid_positive",
610
+ "recovery",
611
+ "covid_negative",
612
+ "covid_positive",
613
+ "covid_positive",
614
+ "covid_positive",
615
+ "recovery",
616
+ "covid_negative",
617
+ "covid_positive",
618
+ "covid_positive",
619
+ "covid_positive",
620
+ "covid_positive",
621
+ "recovery",
622
+ "covid_negative",
623
+ "covid_positive",
624
+ "covid_positive",
625
+ "covid_positive",
626
+ "covid_positive",
627
+ "covid_positive",
628
+ "covid_positive",
629
+ "recovery",
630
+ "covid_negative",
631
+ "covid_negative",
632
+ "covid_negative",
633
+ "covid_negative",
634
+ "covid_negative",
635
+ "covid_negative",
636
+ "covid_negative",
637
+ "covid_negative",
638
+ "covid_negative",
639
+ "covid_negative",
640
+ "covid_negative"
641
+ ]
642
+ },
643
+ "deg_definition": {
644
+ "enabled": true,
645
+ "score": "top-50 DEG overlap per cell type (benchmark total_top50_overlap, Welch backend)",
646
+ "source": "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py",
647
+ "functions": [
648
+ "welch_bh_deg",
649
+ "top_deg_genes",
650
+ "jaccard"
651
+ ],
652
+ "reproduces": "utility_studies_final6k_20260925/sle top-50 DEG 81 (1,006 genes) / 84 (2,279 genes) = sum over the six gated types of top50_overlap_count",
653
+ "top_n": 50,
654
+ "fdr": 0.05,
655
+ "n_genes": 5927,
656
+ "types": [
657
+ "T cell",
658
+ "B cell",
659
+ "Monocyte",
660
+ "NK cell",
661
+ "DC"
662
+ ],
663
+ "aggregates_source": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/imperial_eskd/deg_reference.npz",
664
+ "aggregates_sha256": "8fada1ace7530b79bfc5c5201b9cb60399ff77d083dd8b53b13cfbe900cda55c",
665
+ "aggregates_note": null,
666
+ "types_not_scored_observed": [],
667
+ "observed": {
668
+ "T cell": {
669
+ "n_significant": 1194,
670
+ "n_tested": 5743,
671
+ "n_case_donors": 104,
672
+ "n_control_donors": 31,
673
+ "n_cells": 244943,
674
+ "top_list_size": 50
675
+ },
676
+ "B cell": {
677
+ "n_significant": 310,
678
+ "n_tested": 5634,
679
+ "n_case_donors": 104,
680
+ "n_control_donors": 31,
681
+ "n_cells": 46230,
682
+ "top_list_size": 50
683
+ },
684
+ "Monocyte": {
685
+ "n_significant": 305,
686
+ "n_tested": 5624,
687
+ "n_case_donors": 103,
688
+ "n_control_donors": 31,
689
+ "n_cells": 77634,
690
+ "top_list_size": 50
691
+ },
692
+ "NK cell": {
693
+ "n_significant": 431,
694
+ "n_tested": 5565,
695
+ "n_case_donors": 104,
696
+ "n_control_donors": 31,
697
+ "n_cells": 65766,
698
+ "top_list_size": 50
699
+ },
700
+ "DC": {
701
+ "n_significant": 295,
702
+ "n_tested": 5419,
703
+ "n_case_donors": 104,
704
+ "n_control_donors": 31,
705
+ "n_cells": 12690,
706
+ "top_list_size": 50
707
+ }
708
+ },
709
+ "broadcast": "welch_bh_deg + top_deg_genes on the arm's condition bulk_counts (scoring genes, case|control donors), one list compared with every type's observed list (sle_broadcast.py broadcast_input_bulk); not part of the published benchmark"
710
+ },
711
+ "headline": {
712
+ "scsemi5nt": {
713
+ "comp_l1": 0.5733824174232961,
714
+ "comp_l1_obs_loo_null": 0.5095285177538514,
715
+ "precision": 0.7469834440183332,
716
+ "coverage": 0.41810868955195957,
717
+ "precision_dm": 0.8423440276868394,
718
+ "coverage_dm": 0.4345711345991956,
719
+ "pb_r_median": 0.8910944357203344,
720
+ "pb_top1": 0.027972027972027972,
721
+ "mono_pct_gen": 13.27925407925408,
722
+ "mono_pct_obs": 17.567899313806723,
723
+ "median_umi_gen": 1086.0,
724
+ "median_umi_obs": 1367.0,
725
+ "contrast_mean_cp10k_r_gen": 0.7003052691221271,
726
+ "contrast_pseudobulk_log1p_cpm_r_gen": 0.42203107247165816,
727
+ "contrast_mean_cp10k_r_broadcast": 0.6565426449733607,
728
+ "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.6057327733142364,
729
+ "deg_top50_T": 36,
730
+ "deg_top50_B": 19,
731
+ "deg_top50_Mono": 22,
732
+ "deg_top50_NK": 21,
733
+ "deg_top50_DC": 7,
734
+ "deg_top50_sum": 105,
735
+ "deg_top50_max": 250,
736
+ "deg_top50_sum_4type": 98,
737
+ "deg_top50_sum_broadcast": 76,
738
+ "seconds": 48.0
739
+ }
740
+ },
741
+ "per_arm": {
742
+ "scsemi5nt": {
743
+ "arm": "scsemi5nt",
744
+ "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/imperial_eskd/fewshot_n5/draw4/scsemi5nt__raw.npz",
745
+ "npz_sha256": "6f1baaf6a4e31fca63fd8dab7207798fc2e440a4103378410370cd0d94bb8d86",
746
+ "receipt_verified": true,
747
+ "generation": {
748
+ "checkpoint": null,
749
+ "checkpoint_sha256": null,
750
+ "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/imperial_eskd/fewshot_n5/draw4/test_raw.npz",
751
+ "input_condition_sha256": "55970c18927ba5d8e151bf797760d36017fffd360229507c346e39c3c6759f69",
752
+ "seed": 20260927,
753
+ "steps": null,
754
+ "support_readout": "no output threshold: the upstream model's ZINB mean on every modeled gene (sample(bound=0), no xsemi > 10 step); read-out sensitivity variant, not the official output",
755
+ "weights": null
756
+ },
757
+ "condition_for_broadcast": {
758
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/imperial_eskd/fewshot_n5/draw4/test_raw.npz",
759
+ "sha256": "55970c18927ba5d8e151bf797760d36017fffd360229507c346e39c3c6759f69"
760
+ },
761
+ "poisson": {
762
+ "seed": 20260916,
763
+ "rule": "whole NPZ, rows in NPZ order",
764
+ "nnz_whole_npz": 43581229,
765
+ "median_library_whole_npz_panel": 1086.0,
766
+ "n_rows_whole_npz": 214500
767
+ },
768
+ "annotation": {
769
+ "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
770
+ "zero_padded_model_genes": 0,
771
+ "label_counts": {
772
+ "T cell": 123276,
773
+ "NK cell": 36191,
774
+ "Monocyte": 28484,
775
+ "B cell": 20666,
776
+ "DC": 4144,
777
+ "Other": 1739
778
+ },
779
+ "mean_l2_max_prob": 0.9202031392929576,
780
+ "predict_seconds": 6.3
781
+ },
782
+ "n_donors": 143,
783
+ "n_generated_cells": 214500,
784
+ "composition": {
785
+ "l1_mean": 0.5733824174232961,
786
+ "l1_median": 0.5462053545160341,
787
+ "l1_obs_loo_null_mean": 0.5095285177538514,
788
+ "l1_generated_loo_mean_vs_observed_mean": 0.4948202973459219,
789
+ "composition_top1": 0.03496503496503497,
790
+ "mean_fraction_generated": {
791
+ "T cell": 0.574713,
792
+ "B cell": 0.096345,
793
+ "Monocyte": 0.132793,
794
+ "NK cell": 0.168723,
795
+ "DC": 0.019319,
796
+ "Other": 0.008107
797
+ },
798
+ "mean_fraction_observed": {
799
+ "T cell": 0.491688,
800
+ "B cell": 0.123343,
801
+ "Monocyte": 0.175679,
802
+ "NK cell": 0.163061,
803
+ "DC": 0.03105,
804
+ "Other": 0.015178
805
+ }
806
+ },
807
+ "pseudobulk": {
808
+ "n_genes": 5927,
809
+ "r_median": 0.8910944357203344,
810
+ "r_mean": 0.8816166686921827,
811
+ "top1": 0.027972027972027972,
812
+ "n_top1": 4,
813
+ "own_rank_median": 36.0,
814
+ "chance_top1": 0.006993006993006993
815
+ },
816
+ "precision_coverage": {
817
+ "precision": 0.7469834440183332,
818
+ "coverage": 0.41810868955195957,
819
+ "density": 0.3643064259657656,
820
+ "n_query": 21382,
821
+ "n_reference": 21382
822
+ },
823
+ "precision_coverage_depth_matched": {
824
+ "precision": 0.8423440276868394,
825
+ "coverage": 0.4345711345991956,
826
+ "density": 0.47888410812833226,
827
+ "detected_median_before": {
828
+ "R1": 346.0,
829
+ "Q": 188.0
830
+ },
831
+ "detected_median_after": {
832
+ "R1": 188.0,
833
+ "Q": 188.0
834
+ }
835
+ },
836
+ "monocyte_pct": {
837
+ "generated_mean_over_donors": 13.27925407925408,
838
+ "observed_mean_over_donors": 17.567899313806723,
839
+ "generated_pooled_cells": 13.27925407925408
840
+ },
841
+ "median_umi_per_cell_scoring_genes": {
842
+ "generated_pooled": 1086.0,
843
+ "observed_pooled": 1367.0,
844
+ "generated_mean_of_donor_medians": 1085.8321533203125,
845
+ "observed_mean_of_donor_medians": 1292.7272727272727
846
+ },
847
+ "contrast": {
848
+ "mean_cp10k": {
849
+ "per_type": {
850
+ "T cell": {
851
+ "r_generated": 0.7838756497330223,
852
+ "r_broadcast": 0.6232824935145761,
853
+ "partial_r_generated_given_broadcast": 0.6685531292908707,
854
+ "r_generated_vs_broadcast": 0.5663536886369704,
855
+ "n_genes": 3032
856
+ },
857
+ "B cell": {
858
+ "r_generated": 0.6162431107950354,
859
+ "r_broadcast": 0.6315018114438883,
860
+ "partial_r_generated_given_broadcast": 0.4251733136727931,
861
+ "r_generated_vs_broadcast": 0.5346890629872963,
862
+ "n_genes": 3180
863
+ },
864
+ "Monocyte": {
865
+ "r_generated": 0.7035127144820101,
866
+ "r_broadcast": 0.7121111596726496,
867
+ "partial_r_generated_given_broadcast": 0.4110527095611915,
868
+ "r_generated_vs_broadcast": 0.6975429847162419,
869
+ "n_genes": 2878
870
+ },
871
+ "NK cell": {
872
+ "r_generated": 0.6975896014784406,
873
+ "r_broadcast": 0.6592751152623284,
874
+ "partial_r_generated_given_broadcast": 0.5025016762892905,
875
+ "r_generated_vs_broadcast": 0.5993592738822509,
876
+ "n_genes": 2963
877
+ }
878
+ },
879
+ "mean_r_generated": 0.7003052691221271,
880
+ "mean_r_broadcast": 0.6565426449733607,
881
+ "mean_partial_r": 0.5018202072035365
882
+ },
883
+ "pseudobulk_log1p_cpm": {
884
+ "per_type": {
885
+ "T cell": {
886
+ "r_generated": 0.5938252443214995,
887
+ "r_broadcast": 0.6213005296240948,
888
+ "partial_r_generated_given_broadcast": 0.434934901043279,
889
+ "r_generated_vs_broadcast": 0.4722734726243225,
890
+ "n_genes": 3032
891
+ },
892
+ "B cell": {
893
+ "r_generated": 0.15708739338314734,
894
+ "r_broadcast": 0.49592343727839516,
895
+ "partial_r_generated_given_broadcast": 0.0026778952918319935,
896
+ "r_generated_vs_broadcast": 0.312302863764787,
897
+ "n_genes": 3180
898
+ },
899
+ "Monocyte": {
900
+ "r_generated": 0.5461301025971047,
901
+ "r_broadcast": 0.7117946294640722,
902
+ "partial_r_generated_given_broadcast": 0.2939456870863928,
903
+ "r_generated_vs_broadcast": 0.5193900880586005,
904
+ "n_genes": 2878
905
+ },
906
+ "NK cell": {
907
+ "r_generated": 0.39108154958488095,
908
+ "r_broadcast": 0.5939124968903833,
909
+ "partial_r_generated_given_broadcast": 0.22836024657693105,
910
+ "r_generated_vs_broadcast": 0.37124819205939386,
911
+ "n_genes": 2963
912
+ }
913
+ },
914
+ "mean_r_generated": 0.42203107247165816,
915
+ "mean_r_broadcast": 0.6057327733142364,
916
+ "mean_partial_r": 0.23997968249960872
917
+ }
918
+ },
919
+ "deg_top50": {
920
+ "types_scored": [
921
+ "T cell",
922
+ "B cell",
923
+ "Monocyte",
924
+ "NK cell",
925
+ "DC"
926
+ ],
927
+ "types_not_scored": {},
928
+ "per_type": {
929
+ "T cell": {
930
+ "deg_scored": true,
931
+ "top50_overlap": 36,
932
+ "top50_jaccard": 0.5625,
933
+ "obs_top_list_size": 50,
934
+ "gen_top_list_size": 50,
935
+ "top50_overlap_broadcast": 15,
936
+ "top50_jaccard_broadcast": 0.17647058823529413,
937
+ "n_cells_obs": 244943,
938
+ "n_cells_gen": 115943
939
+ },
940
+ "B cell": {
941
+ "deg_scored": true,
942
+ "top50_overlap": 19,
943
+ "top50_jaccard": 0.2345679012345679,
944
+ "obs_top_list_size": 50,
945
+ "gen_top_list_size": 50,
946
+ "top50_overlap_broadcast": 12,
947
+ "top50_jaccard_broadcast": 0.13636363636363635,
948
+ "n_cells_obs": 46230,
949
+ "n_cells_gen": 19500
950
+ },
951
+ "Monocyte": {
952
+ "deg_scored": true,
953
+ "top50_overlap": 22,
954
+ "top50_jaccard": 0.28205128205128205,
955
+ "obs_top_list_size": 50,
956
+ "gen_top_list_size": 50,
957
+ "top50_overlap_broadcast": 21,
958
+ "top50_jaccard_broadcast": 0.26582278481012656,
959
+ "n_cells_obs": 77634,
960
+ "n_cells_gen": 26709
961
+ },
962
+ "NK cell": {
963
+ "deg_scored": true,
964
+ "top50_overlap": 21,
965
+ "top50_jaccard": 0.26582278481012656,
966
+ "obs_top_list_size": 50,
967
+ "gen_top_list_size": 50,
968
+ "top50_overlap_broadcast": 14,
969
+ "top50_jaccard_broadcast": 0.16279069767441862,
970
+ "n_cells_obs": 65766,
971
+ "n_cells_gen": 34844
972
+ },
973
+ "DC": {
974
+ "deg_scored": true,
975
+ "top50_overlap": 7,
976
+ "top50_jaccard": 0.10144927536231885,
977
+ "obs_top_list_size": 50,
978
+ "gen_top_list_size": 26,
979
+ "top50_overlap_broadcast": 14,
980
+ "top50_jaccard_broadcast": 0.16279069767441862,
981
+ "n_cells_obs": 12690,
982
+ "n_cells_gen": 3914
983
+ }
984
+ },
985
+ "sum": 105,
986
+ "sum_4type": 98,
987
+ "max": 250,
988
+ "mean": 21.0,
989
+ "sum_broadcast": 76,
990
+ "sum_broadcast_4type": 62,
991
+ "broadcast_n_significant": 2055,
992
+ "seconds": 0.35
993
+ },
994
+ "seconds": 48.0
995
+ }
996
+ },
997
+ "code_sha256": {
998
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
999
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
1000
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da",
1001
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py": "48b12d794782b840838853e93e0fc55fab00532c4b3698f4588e926b985d2881",
1002
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/immicro/tools/immicro_common.py": "c5c30e917148cc5e664e91ea30c11bbdff9b6d1f53a3e0a13e16b1917eff37e9",
1003
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/predict_scanvi.py": "482ee5dcf4d72b54bc36cbb6dcff62e5030bc7afc46cb5fb01eca73a82ee45a5",
1004
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/poisson_readout.py": "8bfa080942fbcdc89ae23b276524a1a83266fb8cbc56b9af279e50f82e6cde38"
1005
+ },
1006
+ "seconds": 58.9
1007
+ }
paper-releases/pbisc-diffusion/updates/20261003T174003Z-scsemi-readout-sensitivity/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/fewshot_n5/draw4_scsemi5rt/README.md ADDED
@@ -0,0 +1,73 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # score_ft.py output: imperial_eskd, 143 scored donors
2
+
3
+ Arms: scsemi5rt. Every arm is scored on the same donors against the same observed reference.
4
+
5
+ ## Inputs and fixed contracts
6
+ - Observed reference: `/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/imperial_eskd/reference.npz` (sha 34b4caa3f8a6), built from datadir:/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/imperial_eskd;
7
+ observed cells sum exactly to the features pseudobulk of every donor. Observed labels: /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/imperial_eskd/observed_labels/labels/labels.parquet.
8
+ - Generated cells: `generated_counts` read out once with Poisson(seed 20260916) over the **whole NPZ in row order**
9
+ (`poisson_readout.poisson_integerise`), then the scored donors' rows. These integer counts are used for labels, embedding,
10
+ depth and the contrast. Pseudobulk uses the summed `generated_counts` (rates), as `score_generated.py`.
11
+ - Labels: frozen f01common scANVI (`predict_scanvi.py`, CPU, zero query epochs), six-type gate ['T cell', 'B cell', 'Monocyte', 'NK cell', 'DC', 'Other']; query genes =
12
+ the 1,006-gene annotation list minus genes the dataset's sc assay did not measure in every sample (1005 genes).
13
+ - Scoring genes: 6k panel genes measured by both assays in every sample of the dataset (5927 genes).
14
+
15
+ ## Definitions
16
+ 1. **Composition**: fraction of each donor's cells per six-type label (all generated cells; all observed QC cells).
17
+ `comp_l1` = sum over the six labels of |generated - observed| (immicro_common.l1). `comp_l1_obs_loo_null` = L1 of the
18
+ donor's observed composition to the mean of the *other scored donors'* observed compositions. `composition_top1` =
19
+ fraction of donors whose generated composition is closest (L1) to their own observed composition.
20
+ 2. **Pseudobulk**: `pb_r` = Pearson r of CPM-log1p(summed generated_counts) vs CPM-log1p(observed pseudobulk) on the scoring
21
+ genes (evaluate_realbulk.cpm_log1p / paired_r). `pb_top1` = the donor's generated pseudobulk is closest (Pearson) to its own
22
+ observed pseudobulk among the 143 scored donors (immicro_common.retrieval = evaluate_realbulk.top1 arithmetic).
23
+ 3. **Precision / coverage / density** (stage_b_embed.py functions): per-cell CP10K over the scoring genes + log1p; PCA-50
24
+ (randomized, random_state 20260925) and k = 10 real-real k-NN balls fitted on **R1 of the scored donors only**.
25
+ Reference rule (independent of fold and arm): per donor, cells in canonical order (library_id+barcode), one
26
+ permutation from `default_rng([20260925, uint64(sha256(donor)[:8])])`; R1 = first n, R2 = next n,
27
+ n = min(150, n_cells // 2) (21382 R1 cells here). Generated query: per donor n cells (the donor's R1 size),
28
+ without replacement, `default_rng([20260926, same key])`. Precision = fraction of generated cells inside any R1 ball
29
+ (Kynkaanniemi 2019); coverage = fraction of R1 cells whose ball holds a generated cell; density = Naeem 2020.
30
+ Per-donor precision = that donor's generated cells; per-donor coverage = that donor's R1 cells (the pooled values are
31
+ their n-weighted means; plain means when every donor has 150 reference cells). R2 (held-out real cells of the same donors) is the
32
+ perfect-generator control: precision 0.9696, coverage 0.9998.
33
+ **Depth matched**: stage_b_embed depth matching run pairwise (R1 vs this arm): per donor and within-donor rank of detected
34
+ genes, both cells are thinned by UMI sampling without replacement to the smaller detected-gene count; PCA kept from
35
+ un-thinned R1, radii recomputed on thinned R1; fresh rng(20260929) per arm. R2 control: precision
36
+ 0.9684, coverage 0.9997.
37
+ 4. **Monocyte %** = 100 x Monocyte fraction (all cells) per donor; **median UMI per cell** = median over cells of the
38
+ Poisson-read (generated) / observed counts summed over the scoring genes (per donor, and pooled).
39
+ 5. **Group contrast** (T, B, Monocyte, NK): case groups ['covid_positive'] (n = 104) vs control groups ['covid_negative'] (n = 31); rule: explicit --case-groups / --control-groups; groups from features groups.
40
+ Genes per type = scoring genes detected (count > 0) in >= 1 % of the scored donors' observed
41
+ cells of that type. Primary statistic `mean_cp10k`: per-cell CP10K over the scoring genes; per donor the mean over its
42
+ cells of the type (donors with >= 1 such cell); group mean = mean over the group's donors (donor-balanced);
43
+ logFC = log2(case mean + 1) - log2(control mean + 1). Secondary `pseudobulk_log1p_cpm`: the SLE benchmark evaluator's
44
+ statistic (donor x type summed counts, log1p CPM over the scoring genes, mean case - mean control;
45
+ evaluate_generated_vs_truth.group_log_fold_change). Both are computed on the generated cells (their frozen labels) and on
46
+ the observed cells; `r_generated` = Pearson r of the two logFC vectors. Broadcast baseline `r_broadcast`: the same
47
+ observed vector against the logFC of the input bulk (condition NPZ `bulk_counts` of the arm, scoring genes, per-donor
48
+ CP10K resp. log1p CPM, group means). `partial_r_generated_given_broadcast`: r of the OLS residuals of observed and
49
+ generated logFC on the bulk logFC (residual_specificity.py).
50
+ 6. **Top-50 DEG overlap** (contrast.csv rows `statistic = welch_top50_deg`; summary `deg_top50`): the SLE benchmark's score (`total_top50_overlap` of
51
+ `bulk2sc-paper/scripts/evaluate_generated_vs_truth.py`, Welch backend: the "top-50 DEG 81 / 84" of the final model), run
52
+ with the evaluator's own functions on the same donor x type pseudobulks as the contrast. Per cell type, observed and
53
+ generated separately: donor x type summed counts on all 5927 scoring genes (donors of the two groups with
54
+ >= 1 cell of the type) -> `welch_bh_deg` (log1p CPM, two-sided Welch t-test case vs control, Benjamini-Hochberg over the
55
+ genes with a defined p-value; needs >= 2 donors per group) -> `top_deg_genes` (FDR < 0.05, descending |logFC|,
56
+ first 50; shorter when fewer genes pass). `top50_overlap` = |observed list & generated list|; `top50_jaccard`
57
+ the evaluator's Jaccard. Summary `sum` = total over the scored types (the quantity reported as 81), `max` = the sum of
58
+ the observed list lengths (the "of 262"), `sum_4type` = T + B + Monocyte + NK. A type is scored when its observed test
59
+ is defined; an arm whose generated test is undefined for a scored type gets overlap 0. Types: T cell, B cell, Monocyte, NK cell, DC
60
+ (aggregates: /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/imperial_eskd/deg_reference.npz).
61
+ **Broadcast analogue** (`top50_overlap_broadcast`, as `sle_broadcast.py` `broadcast_input_bulk`; not part of the
62
+ published benchmark): the same test on the arm's condition bulk_counts (scoring genes, the 104 + 31
63
+ donors), one whole-PBMC top-50 list, compared with every type's observed list.
64
+
65
+ ## Files
66
+ - `per_donor.csv`: one row per arm x donor (all per-donor quantities above).
67
+ - `summary.json`: per arm the donor means / pooled values, provenance (NPZ sha, receipt check, generation metadata,
68
+ Poisson nnz of the whole NPZ, annotation contract), and the reference block (PCA, R2 control).
69
+ - `contrast.csv`: per arm x cell type x statistic (`mean_cp10k`, `pseudobulk_log1p_cpm`: logFC r; `welch_top50_deg`:
70
+ top-50 DEG overlap, T / B / Monocyte / NK / DC; columns of the other kind are empty).
71
+ - `arms/<arm>/labels/` (predict_scanvi.py labels + manifest), `arms/<arm>/generated_cells.parquet` (NPZ row, donor, label,
72
+ UMI on the scoring genes, P/C subsample flag), `arms/<arm>/deg_top50_lists.csv` (observed, generated and broadcast
73
+ top-50 gene lists, Ensembl ids, rank order).
paper-releases/pbisc-diffusion/updates/20261003T174003Z-scsemi-readout-sensitivity/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/fewshot_n5/draw4_scsemi5rt/contrast.csv ADDED
@@ -0,0 +1,14 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
2
+ scsemi5rt,T cell,mean_cp10k,3032,0.6613405396315041,0.6232824935145761,0.5176315212390514,0.49780707050192374,104,31,104,31,244943,123154,,,,,,,,,,,
3
+ scsemi5rt,T cell,pseudobulk_log1p_cpm,3032,0.39873945244647085,0.6213005296240948,0.21647276643500768,0.39043995596140424,104,31,104,31,244943,123154,,,,,,,,,,,
4
+ scsemi5rt,B cell,mean_cp10k,3180,0.5073364396363791,0.6315018114438883,0.33767215462187467,0.4288360820683583,104,31,102,31,46230,18337,,,,,,,,,,,
5
+ scsemi5rt,B cell,pseudobulk_log1p_cpm,3180,0.045827737940539875,0.49592343727839516,-0.11247927846082263,0.28140223443805606,104,31,102,31,46230,18337,,,,,,,,,,,
6
+ scsemi5rt,Monocyte,mean_cp10k,2878,0.6022159543122085,0.7121111596726496,0.324395793711232,0.586680664835228,103,31,103,31,77634,25781,,,,,,,,,,,
7
+ scsemi5rt,Monocyte,pseudobulk_log1p_cpm,2878,0.380386317700698,0.7117946294640722,0.09547763453581883,0.4502804999959912,103,31,103,31,77634,25781,,,,,,,,,,,
8
+ scsemi5rt,NK cell,mean_cp10k,2963,0.6185256929005074,0.6592751152623284,0.41349371173738575,0.541824119853976,104,31,103,31,65766,27859,,,,,,,,,,,
9
+ scsemi5rt,NK cell,pseudobulk_log1p_cpm,2963,0.30649647093153065,0.5939124968903833,0.11351926815240079,0.373410337529031,104,31,103,31,65766,27859,,,,,,,,,,,
10
+ scsemi5rt,T cell,welch_top50_deg,5927,,,,,104,31,104,31,244943,123154,True,22,0.28205128205128205,50,50,1194,263,15,0.17647058823529413,50,2055
11
+ scsemi5rt,B cell,welch_top50_deg,5927,,,,,104,31,102,31,46230,18337,True,11,0.12359550561797752,50,50,310,179,12,0.13636363636363635,50,2055
12
+ scsemi5rt,Monocyte,welch_top50_deg,5927,,,,,103,31,103,31,77634,25781,True,9,0.0989010989010989,50,50,305,368,21,0.26582278481012656,50,2055
13
+ scsemi5rt,NK cell,welch_top50_deg,5927,,,,,104,31,103,31,65766,27859,True,15,0.17647058823529413,50,50,431,299,14,0.16279069767441862,50,2055
14
+ scsemi5rt,DC,welch_top50_deg,5927,,,,,104,31,103,31,12690,4724,True,9,0.1111111111111111,50,40,295,40,14,0.16279069767441862,50,2055