Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/data/external_refcal/giroux2022/BUILD.json

@@ -0,0 +1,51 @@
+{
+  "schema": "pbisc.strict.external-reference.v1",
+  "cohort": "giroux2022",
+  "input_hashes": {
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/giroux2022/features.npz": "fb41b91617e3ff786d5153c4dc7869d66191ca5947ff28161d24215a24f819e5",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/giroux2022/folds.csv": "09ab6967346edc76db37a8ae1cce5b9381ef76969245373570b0150c987d6b32",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/refcal/reference/aifi_donor_pseudobulk_20097.npz": "f7c7223f0dbfffc20c9137a1ec5b6a2436b27de5a5ae6f15d1686918b6baa564",
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+  },
+  "outputs": {
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+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/giroux2022/conditions_raw.npz": "6fa120975b9441290976fc1a76782e797f09b930a7baabd743bff19c1ef10e76",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/giroux2022/alpha.npy": "c00436a905187dd9ddc283a3832af6756390cf795e63c4b3b83b5be46ca4ac4d"
+  },
+  "target_bulk_anchor_sample_ids": [
+    "450905_d0",
+    "450905_d14",
+    "0B943B_d0",
+    "0B943B_d14",
+    "7085CA_d0",
+    "7085CA_d7",
+    "7085CA_d14",
+    "2AD75E_d0",
+    "2AD75E_d7",
+    "2AD75E_d14",
+    "B85D75_d0",
+    "B85D75_d7",
+    "180E1A_d0",
+    "180E1A_d7",
+    "180E1A_d14",
+    "82CCF5_d0",
+    "82CCF5_d7",
+    "82CCF5_d14",
+    "BAAF62_d0",
+    "BAAF62_d7",
+    "BAAF62_d14",
+    "0BF51C_d0",
+    "0BF51C_d7",
+    "0BF51C_d14"
+  ],
+  "target_sc_expression_accessed": false,
+  "output_assay_mask_source": "pre-existing structural assay metadata; no expression/depth fitting",
+  "reference": "external AIFI donor-mean CPM",
+  "reference_donors": 108,
+  "paired_target_samples_used": 0,
+  "transductive_target_bulk": true,
+  "K_cond": 1000,
+  "rho": 3869.603120208939,
+  "N_gen": 1500,
+  "alpha_genes": 10866
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/deconvolution/ye2026_sepsis/disease/draw0/SUPPORT.json

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+{
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+    "IC10",
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+    "Uri-S93"
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+  "excluded": []
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/data/external_refcal/giroux2022/alpha.npy

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