Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20260930T090852Z-summary-deck-final-path-story/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/tools/sync_sec09_text.py

@@ -0,0 +1,57 @@
+#!/usr/bin/env python3
+"""Copy section 9 slide text from data/sec09_slide_text.json into data/slides_spec.json.
+
+sec09_paired_validation.py regenerates titles, keywords and footnotes from the
+scores (the scSemiProfiler verdicts can change when the missing draws arrive).
+Run after that script and before generate_deck.py:
+
+    python3 tools/sec09_paired_validation.py
+    python3 tools/sync_sec09_text.py
+    python3 generate_deck.py
+
+Titles, keywords, footnote_full and (from footnote_short) the on-slide footnote are
+overwritten; if footnote_full changed, the script lists the slide so the
+short copy can be checked by hand (the deck build fails if it exceeds 2 lines).
+"""
+import json
+import sys
+from pathlib import Path
+
+DECK = Path(__file__).resolve().parents[1]
+SPEC = Path(sys.argv[1]) if len(sys.argv) > 1 else DECK / "data" / "slides_spec.json"
+SRC = DECK / "data" / "sec09_slide_text.json"
+
+
+def main() -> None:
+    spec = json.loads(SPEC.read_text())
+    src = json.loads(SRC.read_text())["slides"]
+    review = []
+    n = 0
+    for s in spec["slides"]:
+        i = s.get("sec09_index")
+        if i is None:
+            continue
+        g = src[i]
+        figs = [str(Path(f).relative_to(DECK)) for f in g["figures"]]
+        have = [str(Path(f).relative_to(DECK)) if Path(f).is_absolute() else f for f in s["figures"]]
+        if figs != have:
+            raise SystemExit(f"figure mismatch for sec09 slide {i}: {figs} vs {s['figures']}")
+        s["figures"] = figs
+        s["title"] = g["title"]
+        s["keywords"] = g["keywords"]
+        if s.get("footnote_full", s.get("footnote")) != g["footnote"]:
+            review.append(g["title"])
+        s["footnote_full"] = g["footnote"]
+        if g.get("footnote_short"):
+            s["footnote"] = g["footnote_short"]
+        n += 1
+    if n != len(src):
+        raise SystemExit(f"spec has {n} sec09 slides, source has {len(src)}")
+    SPEC.write_text(json.dumps(spec, indent=2, ensure_ascii=False) + "\n")
+    print(f"synced {n} section 9 slides")
+    for t in review:
+        print(f"REVIEW short footnote (source footnote changed): {t}")
+
+
+if __name__ == "__main__":
+    main()