Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/imperial_eskd/fewshot_draw3_full/contrast.csv

@@ -0,0 +1,17 @@
+genes,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast
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+zero_filled,T cell,pseudobulk_log1p_cpm,3031,0.35822535898359664,0.6151584600190607,-0.12787939283991234,0.6994603201487217
+zero_filled,B cell,mean_cp10k,3186,0.43389645618395367,0.6181604529907424,0.031756337967993487,0.6720115816513174
+zero_filled,B cell,pseudobulk_log1p_cpm,3186,0.31269803379086697,0.4479445109520174,-0.03388440671865326,0.74331410597672
+zero_filled,Monocyte,mean_cp10k,2879,0.7061545736221454,0.7038117222497147,0.283542161659937,0.854814847406178
+zero_filled,Monocyte,pseudobulk_log1p_cpm,2879,0.6779806801226814,0.6894081488945825,0.22899948973390036,0.8610791307417331
+zero_filled,NK cell,mean_cp10k,2964,0.6888325737627976,0.6572983397395356,0.3305259636770392,0.845791345737206
+zero_filled,NK cell,pseudobulk_log1p_cpm,2964,0.5810045287908513,0.5733589034230205,0.22280589251702723,0.8411588394188828
+covered,T cell,mean_cp10k,2844,0.5295833823781556,0.6024360509976936,0.12372717737152368,0.7755946043195786
+covered,T cell,pseudobulk_log1p_cpm,2844,0.3714730364248251,0.6134828249040054,-0.11776089141619377,0.7119627789819463
+covered,B cell,mean_cp10k,2998,0.4416366942917503,0.5936446317756923,0.0449546049760981,0.7004487559520707
+covered,B cell,pseudobulk_log1p_cpm,2998,0.3215524552987063,0.4395093301228059,-0.020223185596880296,0.7585486739171349
+covered,Monocyte,mean_cp10k,2706,0.7212719938635807,0.6941934992077384,0.32512694703828315,0.8770699725001229
+covered,Monocyte,pseudobulk_log1p_cpm,2706,0.6907885303187546,0.6909386541924855,0.24086283128822375,0.8801593882007593
+covered,NK cell,mean_cp10k,2782,0.7053275695201734,0.6353466017492294,0.4014673692731246,0.866943676349923
+covered,NK cell,pseudobulk_log1p_cpm,2782,0.5960783260146427,0.5711458149558114,0.25209037054761535,0.8568808998907952

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/imperial_eskd/fewshot_draw3_full/per_donor.csv

@@ -0,0 +1,146 @@
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paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/imperial_eskd/fewshot_draw3_full/summary.json

@@ -0,0 +1,147 @@
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+ "deg_per_type": {
+  "zero_filled": {
+   "bp": {
+    "T cell": 11,
+    "B cell": 1,
+    "Monocyte": 26,
+    "NK cell": 7,
+    "DC": 16
+   },
+   "broadcast": {
+    "T cell": 16,
+    "B cell": 13,
+    "Monocyte": 20,
+    "NK cell": 15,
+    "DC": 12
+   }
+  },
+  "covered": {
+   "bp": {
+    "T cell": 11,
+    "B cell": 1,
+    "Monocyte": 26,
+    "NK cell": 7,
+    "DC": 16
+   },
+   "broadcast": {
+    "T cell": 15,
+    "B cell": 13,
+    "Monocyte": 19,
+    "NK cell": 14,
+    "DC": 13
+   }
+  }
+ },
+ "tool_sha256": "15ed044bbfc39c501c7187ad78586902f2aa0635e7b3a90786b4587cedc2008a",
+ "score_ft_sha256": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
+ "seconds": 6.4
+}

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/imperial_eskd/fewshot_draw4/contrast.csv

@@ -0,0 +1,17 @@
+genes,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast
+zero_filled,T cell,mean_cp10k,3032,0.5615637893255707,0.6232824935145761,0.19518473026934977,0.734902107934275
+zero_filled,T cell,pseudobulk_log1p_cpm,3032,0.5232136136736583,0.6213005296240948,0.04345982158753596,0.8099825018061774
+zero_filled,B cell,mean_cp10k,3180,0.342045439383343,0.6315018114438883,0.04799323597637963,0.4902790529981944
+zero_filled,B cell,pseudobulk_log1p_cpm,3180,0.36999145900946667,0.49592343727839516,0.12057981177730132,0.5730326127316395
+zero_filled,Monocyte,mean_cp10k,2878,0.7434715623085851,0.7121111596726496,0.3197705639190267,0.9218921909344822
+zero_filled,Monocyte,pseudobulk_log1p_cpm,2878,0.7437826516361445,0.7117946294640722,0.31359404590756945,0.9360774052828649
+zero_filled,NK cell,mean_cp10k,2963,0.7282054265937777,0.6592751152623284,0.4119550658896087,0.8946182080380813
+zero_filled,NK cell,pseudobulk_log1p_cpm,2963,0.6204746428080342,0.5939124968903833,0.23637437955288357,0.9170027187393045
+covered,T cell,mean_cp10k,3011,0.5654978409943223,0.618000424948151,0.20553604560312327,0.7388477814299285
+covered,T cell,pseudobulk_log1p_cpm,3011,0.5267816743771548,0.6200693028269287,0.05052949148118289,0.8122613019220293
+covered,B cell,mean_cp10k,3159,0.34334185877599865,0.6277876846963093,0.04689914097030511,0.4964293104096963
+covered,B cell,pseudobulk_log1p_cpm,3159,0.3727758160112156,0.4935640432403785,0.12439203024149532,0.5761130866766945
+covered,Monocyte,mean_cp10k,2858,0.7495808155460485,0.7090309524498464,0.3491212652764469,0.9267220043080653
+covered,Monocyte,pseudobulk_log1p_cpm,2858,0.7462657371286465,0.711277891961731,0.32417471595997766,0.9390989386318568
+covered,NK cell,mean_cp10k,2942,0.7335634998502302,0.6565625022128739,0.43390213225633106,0.9000428237997369
+covered,NK cell,pseudobulk_log1p_cpm,2942,0.6236036766211682,0.5928047056521147,0.2477676807585711,0.9201646616432412