Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/receipts/score.json

@@ -0,0 +1,52 @@
+{
+  "state": "completed",
+  "stage": "score",
+  "at": "2026-10-15T11:59:57.996216+00:00",
+  "outputs": [
+    {
+      "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score/arms/lora/generated_cells.parquet",
+      "sha256": "128794aef07dd47daf729fea2fc6b2a7188a1fa870ab16caccf2c597d178c261",
+      "bytes": 291340
+    },
+    {
+      "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score/arms/lora/labels/labels.manifest.json",
+      "sha256": "152388799bc77a4b840be69b6f03ee3cb69263175685329d1ad7e7743902b6f9",
+      "bytes": 5113
+    },
+    {
+      "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score/arms/lora/labels/labels.parquet",
+      "sha256": "6470c051a31294e9627c0897c3eccd99bb0b3b1d2d2fdb9ff85a1613c3c80e1d",
+      "bytes": 831051
+    },
+    {
+      "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score/per_donor.csv",
+      "sha256": "ae8f5f3960869bbc94d9630a20d354fd2c2f3d7cf2d98e9bc85d0d5207a3ed46",
+      "bytes": 9189
+    },
+    {
+      "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score/summary.json",
+      "sha256": "a7a4460d7b7820e4406843ceb0e870e76ce14f975d1fb8bf8def158eaffd1769",
+      "bytes": 7567
+    },
+    {
+      "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/scoring_support.json",
+      "sha256": "ee1492e06fe9164808f026bec24dcd8c938d415da306586472824d9726dcdcbc",
+      "bytes": 2096
+    }
+  ],
+  "support_sha256": "52b20ff9322e8bf850bd0092fb61a1ad1bdbf6304ddd2b7b654ef90fe8009e7e",
+  "binding": {
+    "arm": "lora",
+    "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold0/n20/lora.npz",
+    "npz_sha256": "e378b2f0aa4200acf0446d5f24ec28518542cb898a6acf8c85c88759fa82715e",
+    "receipt": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold0/n20/lora.log",
+    "receipt_sha256": "571b938fd2e358325edf7059fd1a72ce0f6224659017f593b970506621b9846f",
+    "source_binding": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/immicro/healthy/fold0/n20/lora/RUN.json",
+    "source_binding_sha256": "c00cf5ca89861ee049da76aa30762187d7f31fafcdb0fd513254bfe2a69c3dd3",
+    "condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold0/n20/test_raw.npz",
+    "condition_sha256": "51ad5b8f668b55d80d2f8d275a3a2a9b56f7daa768d6b607dcea4b7379465f60",
+    "checkpoint_sha256": "2594ae6dcbc48adb48ef22db78dee6ddc7787045404a952a4c013c14ae3fbdcd",
+    "support_sha256": "52b20ff9322e8bf850bd0092fb61a1ad1bdbf6304ddd2b7b654ef90fe8009e7e"
+  },
+  "reuse": {}
+}

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score/per_donor.csv

@@ -0,0 +1,23 @@
+arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
+lora,HS3,DB3,1500,4617,150,0.7126666666666667,0.6484730344379467,0.06666666666666667,0.06952566601689408,0.102,0.17782109594975093,0.06,0.07060862031622266,0.04933333333333333,0.028589993502274202,0.009333333333333334,0.004981589776911414,0.17857743123240205,0.04060118700472884,0.9065324555791907,4,False,0.9933333333333333,0.9866666666666667,1.0,1.0,10.2,17.782109594975093,2872.5,2186.0
+lora,HS6,DB3,1500,4222,150,0.488,0.4836570345807674,0.04666666666666667,0.037423022264329704,0.2946666666666667,0.3147797252486973,0.1,0.13003315963998105,0.054,0.024869729985788725,0.016666666666666666,0.009237328280435813,0.1002924364440233,0.3824588765473767,0.909569051294591,3,False,1.0,0.8866666666666667,0.9933333333333333,0.9866666666666667,29.46666666666667,31.47797252486973,2438.5,2457.5
+lora,HS7,DB1,1500,4271,150,0.71,0.7035822992273473,0.059333333333333335,0.03839850152189183,0.114,0.13135097166939827,0.072,0.09740107703114025,0.034666666666666665,0.02130648560056193,0.01,0.0079606649496605,0.08550409740107694,0.17462025766050882,0.9051148192462919,2,False,0.9933333333333333,1.0,0.9933333333333333,1.0,11.4,13.135097166939827,2675.5,1748.0
+lora,HS13,DB5,1500,4792,150,0.6013333333333334,0.6156093489148581,0.078,0.056343906510851416,0.21266666666666667,0.2166110183639399,0.05533333333333333,0.08764607679465776,0.038,0.02003338898163606,0.014666666666666666,0.0037562604340567614,0.10106622148024477,0.07950263318013584,0.9148787125067647,4,False,1.0,0.8466666666666667,0.9933333333333333,0.9866666666666667,21.266666666666666,21.66110183639399,3048.0,2176.0
+lora,HS18,DB4,1500,3348,150,0.76,0.6633811230585425,0.056666666666666664,0.05734767025089606,0.11,0.18309438470728792,0.035333333333333335,0.07198327359617682,0.028666666666666667,0.016129032258064516,0.009333333333333334,0.008064516129032258,0.22085065710872157,0.056830454472214534,0.9038952103200126,9,False,1.0,0.9333333333333333,1.0,1.0,11.0,18.309438470728793,3177.5,2108.0
+lora,HS31,DB3,1500,4830,150,0.654,0.5956521739130435,0.06933333333333333,0.07039337474120083,0.122,0.21884057971014492,0.10266666666666667,0.08385093167701864,0.03933333333333333,0.02546583850931677,0.012666666666666666,0.005797101449275362,0.19580124223602485,0.08982859354260735,0.9122452603653902,1,True,0.9933333333333333,0.9333333333333333,0.9866666666666667,1.0,12.2,21.884057971014492,2791.5,2217.5
+lora,HS34,DB5,1500,4363,150,0.694,0.7073114829245931,0.07533333333333334,0.04859041943616777,0.13866666666666666,0.16983726793490717,0.051333333333333335,0.0550080220032088,0.03133333333333333,0.013981205592482237,0.009333333333333334,0.005271602108640843,0.0963135457254183,0.14554772243505307,0.9124841207064471,11,False,0.9933333333333333,0.7933333333333333,0.9933333333333333,0.96,13.866666666666665,16.983726793490717,3152.5,2176.0
+lora,HS37,DB6,1500,2127,150,0.5553333333333333,0.5763986835919135,0.12466666666666666,0.14997649271274094,0.17666666666666667,0.18288669487541137,0.08533333333333333,0.06535025858015985,0.04466666666666667,0.021626704278326282,0.013333333333333334,0.0037611659614480487,0.10519040902679827,0.17642904039178112,0.9105813021802555,10,False,0.98,0.8866666666666667,0.9866666666666667,0.9933333333333333,17.666666666666668,18.28866948754114,2758.0,2099.0
+lora,HS38,DB2,1500,3952,150,0.5486666666666666,0.4534412955465587,0.052,0.06022267206477733,0.22866666666666666,0.27631578947368424,0.114,0.16776315789473684,0.04933333333333333,0.03365384615384615,0.007333333333333333,0.00860323886639676,0.22180971659919027,0.3979973492276381,0.9156103875054064,3,False,1.0,0.98,1.0,1.0,22.866666666666667,27.631578947368425,2611.0,1448.0
+lora,HS52,DB1,1500,4286,150,0.6846666666666666,0.7473168455436304,0.06933333333333333,0.04316378908072795,0.12,0.12085860942603827,0.08066666666666666,0.06276248250116659,0.032,0.017498833411105925,0.013333333333333334,0.008399440037330844,0.12701757660600407,0.23339752310597672,0.9026064992408425,3,False,1.0,0.98,0.9933333333333333,1.0,12.0,12.085860942603826,2358.0,1848.5
+lora,HS58,DB7,1500,1299,150,0.636,0.6605080831408776,0.030666666666666665,0.029253271747498075,0.16133333333333333,0.15550423402617397,0.12266666666666666,0.1170130869899923,0.034,0.03156274056966898,0.015333333333333332,0.006158583525789068,0.049016166281755195,0.13904887966629118,0.9007957746240678,11,False,1.0,0.9266666666666666,1.0,1.0,16.133333333333333,15.550423402617398,2136.5,1944.0
+lora,HS60,DB6,1500,2659,150,0.63,0.6288078224896577,0.048666666666666664,0.04061677322301617,0.154,0.16058668672433246,0.124,0.14328694998119593,0.03133333333333333,0.020308386611508085,0.012,0.006393380970289583,0.05174727341105683,0.12991818939150382,0.9076070824192727,16,False,0.9933333333333333,0.9333333333333333,1.0,0.9933333333333333,15.4,16.058668672433246,2637.5,2014.0
+lora,HS66,DB4,1500,4857,150,0.6526666666666666,0.6448424953675108,0.10533333333333333,0.10376775787523163,0.12666666666666668,0.16512250360304714,0.068,0.07020794729256744,0.035333333333333335,0.012559192917438749,0.012,0.0035001029442042414,0.08132756845789577,0.09427105876197542,0.9037487131854702,16,False,0.9933333333333333,0.9066666666666666,1.0,0.9866666666666667,12.666666666666668,16.512250360304716,2879.0,2041.0
+lora,HS81,DB7,1500,1638,150,0.738,0.721001221001221,0.072,0.04212454212454213,0.11466666666666667,0.13553113553113552,0.03933333333333333,0.06288156288156288,0.027333333333333334,0.03296703296703297,0.008666666666666666,0.005494505494505495,0.10009279609279607,0.19387054279631524,0.9030859682344073,10,False,0.9933333333333333,0.9133333333333333,0.9866666666666667,0.9933333333333333,11.466666666666667,13.553113553113553,3155.0,2240.5
+lora,HS82,DB2,1500,4201,150,0.72,0.6553201618662223,0.124,0.1309212092358962,0.08266666666666667,0.14782194715543917,0.046,0.031183051654368008,0.023333333333333334,0.02499404903594382,0.004,0.009759581052130446,0.15899357295881927,0.18293033059828231,0.9074286433333498,1,True,1.0,1.0,1.0,1.0,8.266666666666666,14.782194715543916,3105.0,1587.0
+lora,HS83,DB6,1500,2410,150,0.67,0.7128630705394191,0.08333333333333333,0.08049792531120332,0.168,0.14481327800829877,0.04066666666666666,0.045228215767634854,0.024666666666666667,0.012448132780082987,0.013333333333333334,0.004149377593360996,0.09484923928077453,0.1880345194642001,0.9132069214977561,3,False,0.9866666666666667,0.9466666666666667,1.0,1.0,16.8,14.481327800829877,2920.5,2373.0
+lora,HS85,DB5,1500,4216,150,0.6213333333333333,0.5785104364326376,0.078,0.07756166982922201,0.19533333333333333,0.22936432637571158,0.059333333333333335,0.0896584440227704,0.035333333333333335,0.021347248576850095,0.010666666666666666,0.003557874762808349,0.1287122074636306,0.13514298327096805,0.911717017312346,13,False,0.9933333333333333,0.7666666666666667,0.9933333333333333,0.9666666666666667,19.53333333333333,22.93643263757116,3034.5,2171.5
+lora,HS86,DB7,1500,1111,150,0.596,0.6561656165616562,0.06,0.0711071107110711,0.19266666666666668,0.162016201620162,0.09866666666666667,0.0711071107110711,0.038,0.034203420342034205,0.014666666666666666,0.0054005400540054005,0.1425454545454546,0.07179394704932163,0.9004228072382193,18,False,0.9866666666666667,0.9533333333333334,0.9933333333333333,0.9933333333333333,19.26666666666667,16.2016201620162,2384.0,1989.0
+lora,HS95,DB1,1500,4264,150,0.6533333333333333,0.6458724202626641,0.12533333333333332,0.08348968105065666,0.12066666666666667,0.13860225140712945,0.048666666666666664,0.09826454033771106,0.035333333333333335,0.025093808630393996,0.016666666666666666,0.008677298311444653,0.13506691682301442,0.09728161934908136,0.907020137498395,1,True,0.9866666666666667,1.0,0.9933333333333333,1.0,12.066666666666666,13.860225140712945,2688.5,1829.5
+lora,HS98,DB2,1500,4959,150,0.48,0.5366001209921355,0.04533333333333334,0.07360354910264166,0.292,0.30490018148820325,0.10933333333333334,0.03891913692276669,0.054,0.03367614438394838,0.019333333333333334,0.012300867110304496,0.19554103649929422,0.3008904548210157,0.9203689218234081,1,True,1.0,0.98,1.0,0.9866666666666667,29.2,30.490018148820326,2786.5,1606.0
+lora,HS101,DB4,1500,6549,150,0.6846666666666666,0.6659031913269201,0.06133333333333333,0.051152847763017255,0.13,0.192090395480226,0.08,0.05939838143227974,0.03666666666666667,0.026721636891128418,0.007333333333333333,0.004733547106428463,0.124180790960452,0.08013023802852969,0.9056613608823118,11,False,0.9933333333333333,0.9466666666666667,1.0,0.9933333333333333,13.0,19.2090395480226,2323.0,1960.0
+lora,HS107,DB1,1500,4445,150,0.7393333333333333,0.7313835770528684,0.066,0.031496062992125984,0.10466666666666667,0.14195725534308212,0.05466666666666667,0.0686164229471316,0.026,0.02002249718785152,0.009333333333333334,0.006524184476940383,0.10248068991376075,0.19608442509403828,0.900797956503031,1,True,0.9866666666666667,1.0,1.0,1.0,10.466666666666667,14.195725534308213,2846.0,1849.0

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score/summary.json

@@ -0,0 +1,212 @@
+{
+ "schema": "paired_ft_scores.v1",
+ "dataset": "immicro",
+ "written_utc": "2026-10-15T11:59:57.991038+00:00",
+ "command": [
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
+  "--dataset",
+  "immicro",
+  "--out",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/score",
+  "--donors",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n20/lora/test_sample_ids.txt",
+  "--threads",
+  "2",
+  "--arm",
+  "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold0/n20/lora.npz",
+  "--no-contrast",
+  "--no-deg"
+ ],
+ "arms": [
+  "lora"
+ ],
+ "donors": [
+  "HS3",
+  "HS6",
+  "HS7",
+  "HS13",
+  "HS18",
+  "HS31",
+  "HS34",
+  "HS37",
+  "HS38",
+  "HS52",
+  "HS58",
+  "HS60",
+  "HS66",
+  "HS81",
+  "HS82",
+  "HS83",
+  "HS85",
+  "HS86",
+  "HS95",
+  "HS98",
+  "HS101",
+  "HS107"
+ ],
+ "n_donors": 22,
+ "reference": {
+  "cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/immicro",
+  "reference_sha256": "c5e2547be3ec3b12cb0c0b404a49e14a046ae59d40be70427f98f083a76bce17",
+  "features_sha256": "735255066ce7ebbac13a1fdfd058e26f31edd60314cc02fd589b0a292dbbc838",
+  "n_r1_cells": 3300,
+  "pca": {
+   "n_components": 50,
+   "explained_variance_ratio_sum": 0.305976539850235,
+   "n_fit_cells": 3300
+  },
+  "r2_control": {
+   "precision": 0.9957575757575757,
+   "coverage": 1.0,
+   "density": 2.6083333333333334,
+   "n_query": 3300,
+   "depth_matched": {
+    "precision": 0.9936363636363637,
+    "coverage": 1.0,
+    "density": 2.558878787878788
+   }
+  },
+  "observed_l1_loo_null_mean": 0.16302776481179745
+ },
+ "contrast_definition": {
+  "enabled": false,
+  "reason": "--no-contrast"
+ },
+ "deg_definition": {
+  "enabled": false,
+  "reason": "--no-deg"
+ },
+ "headline": {
+  "lora": {
+   "comp_l1": 0.12713532029766406,
+   "comp_l1_obs_loo_null": 0.16302776481179745,
+   "precision": 0.9939393939393939,
+   "coverage": 0.9318181818181818,
+   "precision_dm": 0.9957575757575757,
+   "coverage_dm": 0.9927272727272727,
+   "pb_r_median": 0.9072243904158724,
+   "pb_top1": 0.22727272727272727,
+   "mono_pct_gen": 15.736363636363635,
+   "mono_pct_obs": 18.503211518737277,
+   "median_umi_gen": 2769.0,
+   "median_umi_obs": 1976.0,
+   "seconds": 10.5
+  }
+ },
+ "per_arm": {
+  "lora": {
+   "arm": "lora",
+   "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold0/n20/lora.npz",
+   "npz_sha256": "e378b2f0aa4200acf0446d5f24ec28518542cb898a6acf8c85c88759fa82715e",
+   "receipt_verified": true,
+   "generation": {
+    "checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/immicro/healthy/fold0/n20/lora/checkpoint_ft.pt",
+    "checkpoint_sha256": "2594ae6dcbc48adb48ef22db78dee6ddc7787045404a952a4c013c14ae3fbdcd",
+    "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold0/n20/test_raw.npz",
+    "input_condition_sha256": "51ad5b8f668b55d80d2f8d275a3a2a9b56f7daa768d6b607dcea4b7379465f60",
+    "seed": 20260928,
+    "steps": 50,
+    "support_readout": "bernoulli",
+    "weights": "ema"
+   },
+   "condition_for_broadcast": null,
+   "poisson": {
+    "seed": 20260916,
+    "rule": "whole NPZ, rows in NPZ order",
+    "nnz_whole_npz": 9909791,
+    "median_library_whole_npz_panel": 2770.0,
+    "n_rows_whole_npz": 33000
+   },
+   "annotation": {
+    "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
+    "zero_padded_model_genes": 1,
+    "label_counts": {
+     "T cell": 21345,
+     "Monocyte": 5193,
+     "NK cell": 2472,
+     "B cell": 2397,
+     "DC": 1204,
+     "Other": 389
+    },
+    "mean_l2_max_prob": 0.9107019802769928,
+    "predict_seconds": 5.2
+   },
+   "n_donors": 22,
+   "n_generated_cells": 33000,
+   "composition": {
+    "l1_mean": 0.12713532029766406,
+    "l1_median": 0.11468559999362513,
+    "l1_obs_loo_null_mean": 0.16302776481179745,
+    "l1_generated_loo_mean_vs_observed_mean": 0.16827605180529043,
+    "composition_top1": 0.22727272727272727,
+    "mean_fraction_generated": {
+     "T cell": 0.646818,
+     "B cell": 0.072636,
+     "Monocyte": 0.157364,
+     "NK cell": 0.074909,
+     "DC": 0.036485,
+     "Other": 0.011788
+    },
+    "mean_fraction_observed": {
+     "T cell": 0.637846,
+     "B cell": 0.065772,
+     "Monocyte": 0.185032,
+     "NK cell": 0.081281,
+     "DC": 0.023594,
+     "Other": 0.006476
+    }
+   },
+   "pseudobulk": {
+    "n_genes": 5508,
+    "r_median": 0.9072243904158724,
+    "r_mean": 0.9079717783407832,
+    "top1": 0.22727272727272727,
+    "n_top1": 5,
+    "own_rank_median": 4.0,
+    "chance_top1": 0.045454545454545456
+   },
+   "precision_coverage": {
+    "precision": 0.9939393939393939,
+    "coverage": 0.9318181818181818,
+    "density": 3.101060606060606,
+    "n_query": 3300,
+    "n_reference": 3300
+   },
+   "precision_coverage_depth_matched": {
+    "precision": 0.9957575757575757,
+    "coverage": 0.9927272727272727,
+    "density": 4.0203030303030305,
+    "detected_median_before": {
+     "R1": 365.0,
+     "Q": 290.0
+    },
+    "detected_median_after": {
+     "R1": 289.0,
+     "Q": 289.0
+    }
+   },
+   "monocyte_pct": {
+    "generated_mean_over_donors": 15.736363636363635,
+    "observed_mean_over_donors": 18.503211518737277,
+    "generated_pooled_cells": 15.736363636363638
+   },
+   "median_umi_per_cell_scoring_genes": {
+    "generated_pooled": 2769.0,
+    "observed_pooled": 1976.0,
+    "generated_mean_of_donor_medians": 2762.681884765625,
+    "observed_mean_of_donor_medians": 2003.1363636363637
+   },
+   "seconds": 10.5
+  }
+ },
+ "code_sha256": {
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py": "48b12d794782b840838853e93e0fc55fab00532c4b3698f4588e926b985d2881",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/immicro/tools/immicro_common.py": "c5c30e917148cc5e664e91ea30c11bbdff9b6d1f53a3e0a13e16b1917eff37e9",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/predict_scanvi.py": "482ee5dcf4d72b54bc36cbb6dcff62e5030bc7afc46cb5fb01eca73a82ee45a5",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/poisson_readout.py": "8bfa080942fbcdc89ae23b276524a1a83266fb8cbc56b9af279e50f82e6cde38"
+ },
+ "seconds": 13.3
+}

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold4/n40/lora/scoring_support.json

@@ -0,0 +1,67 @@
+{
+  "schema": "pbisc.paper.strict-score-binding.v1",
+  "support_sha256": "33938ffd402679c4e3bc90489e4891da3f72101bf5a52e3a479a3ee9db212dae",
+  "cohort": "immicro",
+  "unit": "fold4_n40",
+  "test_sample_ids": [
+    "HS8",
+    "HS11",
+    "HS20",
+    "HS27",
+    "HS28",
+    "HS41",
+    "HS45",
+    "HS54",
+    "HS64",
+    "HS70",
+    "HS74",
+    "HS75",
+    "HS76",
+    "HS77",
+    "HS87",
+    "HS88",
+    "HS93",
+    "HS94",
+    "HS97",
+    "HS103",
+    "HS104"
+  ],
+  "test_donor_ids": [
+    "HS8",
+    "HS11",
+    "HS20",
+    "HS27",
+    "HS28",
+    "HS41",
+    "HS45",
+    "HS54",
+    "HS64",
+    "HS70",
+    "HS74",
+    "HS75",
+    "HS76",
+    "HS77",
+    "HS87",
+    "HS88",
+    "HS93",
+    "HS94",
+    "HS97",
+    "HS103",
+    "HS104"
+  ],
+  "arm_bindings": {
+    "lora": {
+      "arm": "lora",
+      "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold4/n40/lora.npz",
+      "npz_sha256": "1fa40792e17987d2134e289d6e6b04a73b0b4187da6b6ac1a9b677b2284b8eb0",
+      "receipt": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold4/n40/lora.log",
+      "receipt_sha256": "461c954c841aaea61d9cff409891a8e6140f888931d43d35abe92376f305bc60",
+      "source_binding": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/immicro/healthy/fold4/n40/lora/RUN.json",
+      "source_binding_sha256": "f29c457014daecc50d2737b6b52a47d20259077c6f736f8e04b2175330faaf2c",
+      "condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold4/n40/test_raw.npz",
+      "condition_sha256": "9e0a41119111a870b011b94fad6a53480b59eac0a709c61f0f314f74d8f201b8",
+      "checkpoint_sha256": "2240d5898d8ecfde28952df659965e87983ca7c0b0ffc105987970d80d564899",
+      "support_sha256": "33938ffd402679c4e3bc90489e4891da3f72101bf5a52e3a479a3ee9db212dae"
+    }
+  }
+}