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  1. paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/headline.csv +7 -0
  2. paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/limma/R.log +3 -0
  3. paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/limma/jobs.csv +77 -0
  4. paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/limma/limma_status.csv +77 -0
paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/headline.csv ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ dataset,design,unit,arm,label,role,condition,pearson_r,spearman_r,partial_r,broadcast_pearson_r,broadcast_spearman_r,splithalf_r_AB,splithalf_r_AB_sd,splithalf_spearman_AB,sb_reliability,noise_free_ceiling,r_generated_vs_halfB,r_broadcast_vs_halfB,welch_top50,welch_top50_max,welch_top50_chance,welch_top50_broadcast,welch_top50_broadcast_chance,welch_n_sig_obs,welch_n_sig_gen,welch_n_sig_broadcast_per_type,welch_types_scored,limma_top50,limma_top50_max,limma_top50_chance,limma_top50_broadcast,limma_top50_broadcast_chance,limma_n_sig_obs,limma_n_sig_gen,limma_n_sig_broadcast_per_type,limma_types_scored,limma_fbe_top50,limma_fbe_top50_max,limma_fbe_top50_chance,limma_fbe_top50_broadcast,limma_fbe_top50_broadcast_chance,limma_fbe_n_sig_obs,limma_fbe_n_sig_gen,limma_fbe_n_sig_broadcast_per_type,limma_fbe_types_scored,cat50,cat50_chance,cat100,cat100_chance,rbo,rbo_up_down,cat_types,broadcast_cat50,broadcast_cat50_chance,broadcast_cat100,broadcast_cat100_chance,broadcast_rbo,broadcast_rbo_up_down,broadcast_cat_types,repro_pass
2
+ imperial_eskd,pooled,pooled,pseudo_full__cal,sc-only fine-tune (+ calibration),other,conditions_pooled_cal.npz@79135860,0.8081921526275624,0.5808088433033695,0.6295019503502952,0.6901082987421676,0.4479806299502819,0.895725697380963,0.00229684690007292,0.7113574423831496,0.9434803243393834,0.9711000682817799,0.7945519633779939,0.6772902978661455,129,250,2.990374100420532,97,2.267067150501121,2472,2803,2083,5,114,250,2.990374100420532,72,2.267067150501121,4880,5540,2099,5,119,250,11.369177696785687,75,5.684095928468326,3140,1945,1732,5,0.28,0.005980748200841064,0.354,0.011961496401682129,0.40112324832234975,0.3289569563642371,5,0.2,0.004534134301002241,0.21600000000000003,0.009068268602004482,0.26393246228254874,0.2092578068827716,5,True
3
+ imperial_eskd,pooled,pooled,pseudo_full__raw,"sc-only fine-tune, real bulk",other,conditions_pooled_raw.npz@7fbfb797,0.46880822702400493,0.18031931967724504,0.2392139976562123,0.6606053132085035,0.35891872041480566,0.895725697380963,0.00229684690007292,0.7113574423831496,0.9434803243393834,0.9711000682817799,0.46000379546943365,0.6478884695946181,54,250,2.8766987764307466,84,2.267067150501121,2472,3164,2242,5,83,250,2.8766987764307466,63,2.267067150501121,4880,6213,2104,5,89,250,10.555329971206202,66,5.693941050474507,3140,2252,1817,5,0.16799999999999998,0.005753397552861494,0.2,0.011506795105722988,0.22343214925933466,0.1872001509484859,5,0.16799999999999998,0.004534134301002241,0.21399999999999997,0.009068268602004482,0.1772937462567108,0.17125505414813655,5,True
4
+ imperial_eskd,pooled,pooled,real_lora__raw,"LoRA, all training pairs",lora,conditions_pooled_raw.npz@7fbfb797,0.8187448084273437,0.6312082116419333,0.6899314750539278,0.6606053132085035,0.35891872041480566,0.895725697380963,0.00229684690007292,0.7113574423831496,0.9434803243393834,0.9711000682817799,0.8058407411844704,0.6478884695946181,143,250,2.986051630616731,84,2.267067150501121,2472,3005,2242,5,122,250,2.986051630616731,63,2.267067150501121,4880,4500,2104,5,123,250,9.605241724411044,66,5.693941050474507,3140,1973,1817,5,0.196,0.005972103261233463,0.304,0.011944206522466926,0.4129612127401643,0.30734466567928065,5,0.16799999999999998,0.004534134301002241,0.21399999999999997,0.009068268602004482,0.1772937462567108,0.17125505414813655,5,True
5
+ imperial_eskd,pooled,pooled,zs__cal,Zero-shot + calibration,zs_cal,conditions_pooled_cal.npz@79135860,0.6787028713891314,0.37457257965605567,0.41180392471305144,0.6901082987421676,0.4479806299502819,0.895725697380963,0.00229684690007292,0.7113574423831496,0.9434803243393834,0.9711000682817799,0.6669352779810005,0.6772902978661455,111,250,2.9792716689909833,97,2.267067150501121,2472,3564,2083,5,101,250,2.9792716689909833,72,2.267067150501121,4880,6469,2099,5,98,250,11.749006455810251,75,5.684095928468326,3140,2832,1732,5,0.156,0.005958543337981966,0.23400000000000004,0.011917086675963933,0.26345362049840915,0.20585679805399945,5,0.2,0.004534134301002241,0.21600000000000003,0.009068268602004482,0.26393246228254874,0.2092578068827716,5,True
6
+ imperial_eskd,pooled,pooled,zs__pseudo,"Zero-shot, sc pseudobulk input (reference)",other,conditions_pooled_pseudo.npz@34f4b1ba,0.6815503704232228,0.3628067160710757,0.37307106435697424,0.7786330186973096,0.6557630225764625,0.895725697380963,0.00229684690007292,0.7113574423831496,0.9434803243393834,0.9711000682817799,0.6696195124862332,0.7658808115942666,101,250,3.007298322537988,112,2.2282051345256852,2472,2293,1922,5,102,250,3.007298322537988,86,2.2282051345256852,4880,5056,1039,5,93,250,12.932804597772492,85,5.502573824104944,3140,1948,838,5,0.20800000000000002,0.006014596645075975,0.3,0.01202919329015195,0.2968218880550046,0.24976675721692954,5,0.348,0.004456410269051371,0.368,0.008912820538102741,0.4518621242297166,0.3607078209964744,5,True
7
+ imperial_eskd,pooled,pooled,zs__raw,"Zero-shot, real bulk",zs_raw,conditions_pooled_raw.npz@7fbfb797,0.6439837621001347,0.4638753514684214,0.43172144888499,0.6606053132085035,0.35891872041480566,0.895725697380963,0.00229684690007292,0.7113574423831496,0.9434803243393834,0.9711000682817799,0.6363202166530278,0.6478884695946181,106,250,2.798812557527124,84,2.267067150501121,2472,4575,2242,5,96,250,2.798812557527124,63,2.267067150501121,4880,9429,2104,5,111,250,9.117562319377903,66,5.693941050474507,3140,3595,1817,5,0.096,0.005597625115054248,0.192,0.011195250230108497,0.26054242920954035,0.20237872094764975,5,0.16799999999999998,0.004534134301002241,0.21399999999999997,0.009068268602004482,0.1772937462567108,0.17125505414813655,5,True
paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/limma/R.log ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ limma jobs: 76 (76 ok)
2
+
3
+ --- stderr ---
paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/limma/jobs.csv ADDED
@@ -0,0 +1,77 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ job,offset,n_samples,is_case,filter
2
+ obs|T cell|nonzero,0,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
3
+ obs|T cell|filterByExpr,0,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
4
+ obs|B cell|nonzero,871269,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
5
+ obs|B cell|filterByExpr,871269,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
6
+ obs|Monocyte|nonzero,1742538,146,11111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
7
+ obs|Monocyte|filterByExpr,1742538,146,11111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
8
+ obs|NK cell|nonzero,2607880,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
9
+ obs|NK cell|filterByExpr,2607880,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
10
+ obs|DC|nonzero,3479149,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
11
+ obs|DC|filterByExpr,3479149,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
12
+ gen:pseudo_full__cal|T cell|nonzero,4350418,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
13
+ gen:pseudo_full__cal|T cell|filterByExpr,4350418,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
14
+ gen:pseudo_full__cal|B cell|nonzero,5221687,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
15
+ gen:pseudo_full__cal|B cell|filterByExpr,5221687,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
16
+ gen:pseudo_full__cal|Monocyte|nonzero,6092956,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
17
+ gen:pseudo_full__cal|Monocyte|filterByExpr,6092956,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
18
+ gen:pseudo_full__cal|NK cell|nonzero,6964225,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
19
+ gen:pseudo_full__cal|NK cell|filterByExpr,6964225,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
20
+ gen:pseudo_full__cal|DC|nonzero,7835494,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
21
+ gen:pseudo_full__cal|DC|filterByExpr,7835494,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
22
+ bcast:79135860513d3de9|nonzero,8706763,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
23
+ bcast:79135860513d3de9|filterByExpr,8706763,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
24
+ gen:pseudo_full__raw|T cell|nonzero,9578032,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
25
+ gen:pseudo_full__raw|T cell|filterByExpr,9578032,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
26
+ gen:pseudo_full__raw|B cell|nonzero,10449301,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
27
+ gen:pseudo_full__raw|B cell|filterByExpr,10449301,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
28
+ gen:pseudo_full__raw|Monocyte|nonzero,11320570,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
29
+ gen:pseudo_full__raw|Monocyte|filterByExpr,11320570,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
30
+ gen:pseudo_full__raw|NK cell|nonzero,12191839,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
31
+ gen:pseudo_full__raw|NK cell|filterByExpr,12191839,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
32
+ gen:pseudo_full__raw|DC|nonzero,13063108,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
33
+ gen:pseudo_full__raw|DC|filterByExpr,13063108,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
34
+ bcast:7fbfb797c40ba266|nonzero,13934377,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
35
+ bcast:7fbfb797c40ba266|filterByExpr,13934377,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
36
+ gen:real_lora__raw|T cell|nonzero,14805646,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
37
+ gen:real_lora__raw|T cell|filterByExpr,14805646,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
38
+ gen:real_lora__raw|B cell|nonzero,15676915,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
39
+ gen:real_lora__raw|B cell|filterByExpr,15676915,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
40
+ gen:real_lora__raw|Monocyte|nonzero,16548184,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
41
+ gen:real_lora__raw|Monocyte|filterByExpr,16548184,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
42
+ gen:real_lora__raw|NK cell|nonzero,17419453,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
43
+ gen:real_lora__raw|NK cell|filterByExpr,17419453,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
44
+ gen:real_lora__raw|DC|nonzero,18290722,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
45
+ gen:real_lora__raw|DC|filterByExpr,18290722,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
46
+ gen:zs__cal|T cell|nonzero,19161991,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
47
+ gen:zs__cal|T cell|filterByExpr,19161991,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
48
+ gen:zs__cal|B cell|nonzero,20033260,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
49
+ gen:zs__cal|B cell|filterByExpr,20033260,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
50
+ gen:zs__cal|Monocyte|nonzero,20904529,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
51
+ gen:zs__cal|Monocyte|filterByExpr,20904529,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
52
+ gen:zs__cal|NK cell|nonzero,21775798,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
53
+ gen:zs__cal|NK cell|filterByExpr,21775798,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
54
+ gen:zs__cal|DC|nonzero,22647067,146,11111111111111111111111101111111111101011111111000011111111111111111111110011110111111111100111110111110110000011110111011101111011111100000000000,nonzero
55
+ gen:zs__cal|DC|filterByExpr,22647067,146,11111111111111111111111101111111111101011111111000011111111111111111111110011110111111111100111110111110110000011110111011101111011111100000000000,filterByExpr
56
+ gen:zs__pseudo|T cell|nonzero,23512409,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
57
+ gen:zs__pseudo|T cell|filterByExpr,23512409,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
58
+ gen:zs__pseudo|B cell|nonzero,24383678,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
59
+ gen:zs__pseudo|B cell|filterByExpr,24383678,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
60
+ gen:zs__pseudo|Monocyte|nonzero,25254947,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
61
+ gen:zs__pseudo|Monocyte|filterByExpr,25254947,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
62
+ gen:zs__pseudo|NK cell|nonzero,26126216,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
63
+ gen:zs__pseudo|NK cell|filterByExpr,26126216,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
64
+ gen:zs__pseudo|DC|nonzero,26997485,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
65
+ gen:zs__pseudo|DC|filterByExpr,26997485,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
66
+ bcast:34f4b1ba6a109ee3|nonzero,27868754,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
67
+ bcast:34f4b1ba6a109ee3|filterByExpr,27868754,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
68
+ gen:zs__raw|T cell|nonzero,28740023,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
69
+ gen:zs__raw|T cell|filterByExpr,28740023,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
70
+ gen:zs__raw|B cell|nonzero,29611292,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
71
+ gen:zs__raw|B cell|filterByExpr,29611292,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
72
+ gen:zs__raw|Monocyte|nonzero,30482561,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
73
+ gen:zs__raw|Monocyte|filterByExpr,30482561,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
74
+ gen:zs__raw|NK cell|nonzero,31353830,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
75
+ gen:zs__raw|NK cell|filterByExpr,31353830,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
76
+ gen:zs__raw|DC|nonzero,32225099,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,nonzero
77
+ gen:zs__raw|DC|filterByExpr,32225099,147,111111111111111111111111011111111111010111111110000111111111111111111111100111101111111111001111101111110110000011110111011101111011111100000000000,filterByExpr
paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/pooled/limma/limma_status.csv ADDED
@@ -0,0 +1,77 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ "job","status","n_tested","n_sig_fdr05","seconds"
2
+ "obs|T cell|nonzero","ok",5755,569,1.542
3
+ "obs|T cell|filterByExpr","ok",3443,683,0.888
4
+ "obs|B cell|nonzero","ok",5645,128,1.143
5
+ "obs|B cell|filterByExpr","ok",2505,284,0.764
6
+ "obs|Monocyte|nonzero","ok",5631,1588,1.194
7
+ "obs|Monocyte|filterByExpr","ok",2348,901,0.648
8
+ "obs|NK cell|nonzero","ok",5591,530,1.165
9
+ "obs|NK cell|filterByExpr","ok",2418,653,0.592
10
+ "obs|DC|nonzero","ok",5437,2065,1.326
11
+ "obs|DC|filterByExpr","ok",1508,619,0.34
12
+ "gen:pseudo_full__cal|T cell|nonzero","ok",4715,715,0.95
13
+ "gen:pseudo_full__cal|T cell|filterByExpr","ok",1563,573,0.423
14
+ "gen:pseudo_full__cal|B cell|nonzero","ok",4057,1646,0.911
15
+ "gen:pseudo_full__cal|B cell|filterByExpr","ok",982,254,0.273
16
+ "gen:pseudo_full__cal|Monocyte|nonzero","ok",4202,2519,0.997
17
+ "gen:pseudo_full__cal|Monocyte|filterByExpr","ok",1362,565,0.224
18
+ "gen:pseudo_full__cal|NK cell|nonzero","ok",4062,283,0.865
19
+ "gen:pseudo_full__cal|NK cell|filterByExpr","ok",992,317,0.177
20
+ "gen:pseudo_full__cal|DC|nonzero","ok",3957,377,0.847
21
+ "gen:pseudo_full__cal|DC|filterByExpr","ok",883,236,0.174
22
+ "bcast:79135860513d3de9|nonzero","ok",5823,2099,1.277
23
+ "bcast:79135860513d3de9|filterByExpr","ok",4013,1732,0.932
24
+ "gen:pseudo_full__raw|T cell|nonzero","ok",4790,1573,1.041
25
+ "gen:pseudo_full__raw|T cell|filterByExpr","ok",1511,656,0.347
26
+ "gen:pseudo_full__raw|B cell|nonzero","ok",4263,120,0.783
27
+ "gen:pseudo_full__raw|B cell|filterByExpr","ok",960,144,0.32
28
+ "gen:pseudo_full__raw|Monocyte|nonzero","ok",4358,999,0.752
29
+ "gen:pseudo_full__raw|Monocyte|filterByExpr","ok",1606,899,0.488
30
+ "gen:pseudo_full__raw|NK cell|nonzero","ok",4537,1602,1.074
31
+ "gen:pseudo_full__raw|NK cell|filterByExpr","ok",1208,381,0.28
32
+ "gen:pseudo_full__raw|DC|nonzero","ok",3904,1919,0.849
33
+ "gen:pseudo_full__raw|DC|filterByExpr","ok",1000,172,0.225
34
+ "bcast:7fbfb797c40ba266|nonzero","ok",5823,2104,1.272
35
+ "bcast:7fbfb797c40ba266|filterByExpr","ok",4133,1817,0.757
36
+ "gen:real_lora__raw|T cell|nonzero","ok",4722,849,0.924
37
+ "gen:real_lora__raw|T cell|filterByExpr","ok",1681,484,0.512
38
+ "gen:real_lora__raw|B cell|nonzero","ok",4215,2490,0.805
39
+ "gen:real_lora__raw|B cell|filterByExpr","ok",1327,258,0.444
40
+ "gen:real_lora__raw|Monocyte|nonzero","ok",4096,577,0.835
41
+ "gen:real_lora__raw|Monocyte|filterByExpr","ok",1458,583,0.339
42
+ "gen:real_lora__raw|NK cell|nonzero","ok",4163,369,0.909
43
+ "gen:real_lora__raw|NK cell|filterByExpr","ok",1389,385,0.279
44
+ "gen:real_lora__raw|DC|nonzero","ok",3836,215,0.781
45
+ "gen:real_lora__raw|DC|filterByExpr","ok",955,263,0.176
46
+ "gen:zs__cal|T cell|nonzero","ok",4812,2551,1.05
47
+ "gen:zs__cal|T cell|filterByExpr","ok",1760,969,0.644
48
+ "gen:zs__cal|B cell|nonzero","ok",4052,334,0.877
49
+ "gen:zs__cal|B cell|filterByExpr","ok",1159,378,0.244
50
+ "gen:zs__cal|Monocyte|nonzero","ok",4469,2853,0.951
51
+ "gen:zs__cal|Monocyte|filterByExpr","ok",1660,874,0.377
52
+ "gen:zs__cal|NK cell|nonzero","ok",4095,656,0.781
53
+ "gen:zs__cal|NK cell|filterByExpr","ok",1277,492,0.314
54
+ "gen:zs__cal|DC|nonzero","ok",3744,75,0.654
55
+ "gen:zs__cal|DC|filterByExpr","ok",546,119,0.182
56
+ "gen:zs__pseudo|T cell|nonzero","ok",4771,686,0.917
57
+ "gen:zs__pseudo|T cell|filterByExpr","ok",1787,676,0.632
58
+ "gen:zs__pseudo|B cell|nonzero","ok",4054,1827,0.827
59
+ "gen:zs__pseudo|B cell|filterByExpr","ok",1133,182,0.294
60
+ "gen:zs__pseudo|Monocyte|nonzero","ok",4360,617,0.564
61
+ "gen:zs__pseudo|Monocyte|filterByExpr","ok",1564,638,0.25
62
+ "gen:zs__pseudo|NK cell|nonzero","ok",4157,343,0.885
63
+ "gen:zs__pseudo|NK cell|filterByExpr","ok",1325,404,0.215
64
+ "gen:zs__pseudo|DC|nonzero","ok",3645,1583,0.825
65
+ "gen:zs__pseudo|DC|filterByExpr","ok",418,48,0.109
66
+ "bcast:34f4b1ba6a109ee3|nonzero","ok",5851,1039,1.216
67
+ "bcast:34f4b1ba6a109ee3|filterByExpr","ok",3858,838,0.831
68
+ "gen:zs__raw|T cell|nonzero","ok",4908,2942,0.971
69
+ "gen:zs__raw|T cell|filterByExpr","ok",1937,984,0.52
70
+ "gen:zs__raw|B cell|nonzero","ok",4315,322,0.918
71
+ "gen:zs__raw|B cell|filterByExpr","ok",1268,341,0.339
72
+ "gen:zs__raw|Monocyte|nonzero","ok",5028,1525,1.058
73
+ "gen:zs__raw|Monocyte|filterByExpr","ok",2315,1396,0.495
74
+ "gen:zs__raw|NK cell|nonzero","ok",4452,2488,0.926
75
+ "gen:zs__raw|NK cell|filterByExpr","ok",1545,654,0.472
76
+ "gen:zs__raw|DC|nonzero","ok",3957,2152,0.796
77
+ "gen:zs__raw|DC|filterByExpr","ok",854,220,0.274