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  1. paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt +6 -0
  2. paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt +0 -0
  3. paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_hires/fractions_results.txt +78 -0
  4. paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot3/out_fractions/CIBERSORTx_Adjusted.txt +78 -0
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ B cell 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
2
+ DC 2 2 2 2 2 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
3
+ Monocyte 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
4
+ NK cell 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2
5
+ Other 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1 2 2 2 2 2
6
+ T cell 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt ADDED
The diff for this file is too large to render. See raw diff
 
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_hires/fractions_results.txt ADDED
@@ -0,0 +1,78 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Mixture B cell DC Monocyte NK cell Other T cell
2
+ Abd-PS04 0.0505484133595377 0.1397755634100602 0.6751464887045712 0.0438243448615829 0.0544997315440189 0.0362054581202288
3
+ Abd-PS05 0.2943412671960124 0.0 0.2368949068232257 0.0921395095737036 0.1876212953531672 0.1890030210538908
4
+ Abd-PS07 0.0095143871139926 0.0730371083227132 0.0156728807667342 0.4397006570158847 0.0052681377723741 0.4568068290083009
5
+ Abd-PS19 0.096479876584376 0.1541220336582538 0.2230727090316364 0.1279244273953887 0.0492713142915575 0.3491296390387873
6
+ Abd-PS20 0.5972338873331718 0.0 0.0 0.0 0.0 0.4027661126668281
7
+ Abd-PS23 0.2439979815303955 0.0 0.175646104637289 0.0008159996699477 0.2633611101457937 0.3161788040165738
8
+ Abd-PS27 0.0 0.0805716264787267 0.0751382155972308 0.0 0.0287837345269584 0.8155064233970839
9
+ Abd-S102 0.0997301573366869 0.0 0.5111886822779189 0.0462622683862765 0.2029126782062945 0.1399062137928231
10
+ Abd-S103 0.0 0.0600501490746502 0.1673769543566115 0.0455459587934802 0.2992834469503448 0.427743490824913
11
+ Abd-S120 0.0827204983036968 0.0 0.5186456864297347 0.1548406876271028 0.0274695788320445 0.2163235488074209
12
+ Abd-S123 0.0733925831934216 0.0333937685232842 0.5376578798757023 0.1821563929209498 0.0785589570040925 0.0948404184825493
13
+ Abd-S156 0.0275234230696373 0.0477775051773471 0.5613382320946206 0.0961943334230056 0.0765828544935502 0.190583651741839
14
+ Abd-S39 0.0385449030938759 0.0 0.6166811113552425 0.0936274141516402 0.0899731621849762 0.161173409214265
15
+ Abd-S42 0.0317307830046616 0.0738412348431133 0.3029269058608732 0.2377897222314346 0.0387399865628085 0.3149713674971084
16
+ Abd-S47 0.1990512207608888 0.0167694875707627 0.0206751634893007 0.0085326940875294 0.0011300326309448 0.7538414014605733
17
+ Abd-S51 0.2413338503119512 0.1908644574827193 0.2765510691620275 0.0802854898601269 0.074806670116689 0.1361584630664858
18
+ Abd-S54 0.1350034026850461 0.0766263113204231 0.2165115935885174 0.3819578149655346 0.0418338693797668 0.1480670080607117
19
+ Abd-S57 0.0 0.1482316785864998 0.3409692540297112 0.1364564810884584 0.0760367992856582 0.2983057870096721
20
+ Abd-S66 0.0993657790123533 0.0 0.5620381362664342 0.2148234430480408 0.0291576780846668 0.0946149635885046
21
+ Abd-S79 0.1139025061233766 0.0526998647100034 0.4568829552032998 0.0626527528838834 0.0259827865955926 0.2878791344838441
22
+ Abd-S83 0.0 0.1084261585498224 0.6243955717947313 0.0417323151118255 0.1953104296984706 0.0301355248451498
23
+ Abd-S98 0.0026781646592978 0.0032408154530414 0.6608421065773243 0.1591375291241328 0.064506623540021 0.1095947606461824
24
+ HC01 0.0964797199364886 0.2846854477402506 0.0655467506035695 0.1430393314040067 0.0096680765263498 0.4005806737893347
25
+ HC05 0.1014989009994439 0.0996736306334424 0.0256091465571726 0.3491016598227329 0.0 0.424116661987208
26
+ HC07 0.0480126947996943 0.2370946224205545 0.1655596976693252 0.3995148590089012 0.0022431201266809 0.1475750059748439
27
+ HC09 0.0150162950637641 0.1934796070423376 0.0496873164171864 0.3060827218728173 0.0 0.4357340596038943
28
+ HC12 0.0505610546753456 0.173092225955253 0.0639603130229011 0.3440401037912435 0.0112420091219749 0.3571042934332817
29
+ HC13 0.0976079190367088 0.0946115368109476 0.0656660110239383 0.3552556711847912 0.0088118799276564 0.3780469820159574
30
+ HC16 0.0358898659378986 0.1288979381864269 0.003255485342898 0.5817757729185975 0.0024174152304189 0.2477635223837598
31
+ IC10 0.0971051254271515 0.0248864172409557 0.1504148093170838 0.1797712779227094 0.0734095170092357 0.4744128530828637
32
+ IC15 0.0413250147641378 0.2155145380167059 0.1384696828201919 0.2263001179012722 0.0015197686560463 0.3768708778416457
33
+ IC16 0.1316314469008761 0.0 0.5504138334175253 0.1407813558976134 0.0342580557923939 0.1429153079915911
34
+ IC19 0.0559194854862358 0.1955955863421983 0.36678419601877 0.0382443723676709 0.0800255805344189 0.2634307792507057
35
+ IC22 0.0 0.1576183827446259 0.5099944037985119 0.1041301043117308 0.0495982324093011 0.1786588767358301
36
+ IC23 0.1058791339377954 0.1272859611186054 0.2787637756006848 0.0 0.0715568986814953 0.4165142306614188
37
+ PHC01 0.168499791641871 0.1333585126512371 0.0102062638001279 0.1930010286155561 0.0077481036916007 0.487186299599607
38
+ PHC02 0.2565867756401664 0.0588977623009428 0.0864022111576622 0.0755662711186371 0.0015310797811331 0.5210159000014581
39
+ PHC03 0.2091362927763253 0.0758253989292075 0.0 0.0795514507916867 0.0 0.6354868575027803
40
+ PHC05 0.0815793670141148 0.1859237342997124 0.0735338791815096 0.1239032328469691 0.0106807405338112 0.5243790461238828
41
+ PIC02 0.4045400893403011 0.0849866064258074 0.0227086907457395 0.0610261813044415 0.0035868584717879 0.4231515737119223
42
+ PIC04 0.1113788134805917 0.0370040481636834 0.4801383845685715 0.0413812413783784 0.0133182541766318 0.3167792582321429
43
+ PIC05 0.2047903715492517 0.1309371906482351 0.1631333243509817 0.0 0.0021522896331531 0.4989868238183781
44
+ Res-PS02 0.156354243693176 0.0 0.1880063258936702 0.0517183344457132 0.0155172889369068 0.5884038070305336
45
+ Res-PS03 0.3460864637052917 0.0305673810601077 0.3885183816260068 0.0 0.0158075396000028 0.2190202340085908
46
+ Res-PS12 0.2850837232736737 0.0 0.3111919146407974 0.0 0.0050228268037416 0.3987015352817872
47
+ Res-PS16 0.2223431113404446 0.0050707024056718 0.0 0.0 0.0 0.7725861862538835
48
+ Res-PS21 0.0898013220655898 0.0721608852810655 0.2922136818274063 0.1922332037806938 0.102125921885682 0.2514649851595623
49
+ Res-PS22 0.0276761563689879 0.1845991953276404 0.3104337818939535 0.1026846291561051 0.0 0.3746062372533128
50
+ Res-PS25 0.3887575237599184 0.0261971341224738 0.0746655974975894 0.0 0.0 0.5103797446200183
51
+ Res-PS26 0.1833724831361627 0.0 0.0973771801847944 0.0 0.0 0.7192503366790428
52
+ Res-S10 0.0090596490034094 0.0192363920580383 0.0747446173654785 0.0189198146228073 0.1734501892995628 0.7045893376507035
53
+ Res-S125 0.1555509455175786 0.0 0.2498723325768287 0.2269542916956096 0.0 0.3676224302099829
54
+ Res-S127 0.0116157157951705 0.1663699897886026 0.4980318451361086 0.0734579006477333 0.0364954950131515 0.2140290536192333
55
+ Res-S139 0.0 0.0824646001566603 0.4130971148073591 0.3911879952625243 0.0 0.1132502897734561
56
+ Res-S146 0.0751273611622245 0.0800749447686371 0.3736475332390289 0.0541739727497946 0.0216984539373894 0.3952777341429253
57
+ Res-S149 0.0503288571761188 0.0899241628113239 0.5195335864128976 0.1184610536152406 0.0159502428678746 0.2058020971165444
58
+ Res-S150 0.1161558403600692 0.1418094104583559 0.420009394754616 0.1339255886407324 0.1454855488101587 0.0426142169760676
59
+ Res-S164 0.1127797216116257 0.166325758654689 0.0139207422583278 0.1702347714412966 0.0115231448231697 0.5252158612108911
60
+ Res-S166 0.1937114381454724 0.0 0.4274722797670301 0.0825145441478646 0.0087109694288323 0.2875907685108004
61
+ Res-S174 0.0625001721512316 0.1129369730921637 0.1229934417743436 0.092625175193441 0.0764652012051815 0.5324790365836384
62
+ Res-S184 0.099992920179419 0.0 0.3777220892529009 0.2564985988466303 0.0283054875765785 0.2374809041444711
63
+ Res-S19 0.0 0.0520520118596996 0.2310981666815275 0.2280591846285364 0.1551991403103232 0.3335914965199131
64
+ Res-S26 0.094115918681856 0.0 0.3168607309440109 0.1657896883226341 0.0725070349647875 0.3507266270867113
65
+ Res-S40 0.0679843476063683 0.119837673260413 0.2465788092430139 0.1157092224409518 0.0470174400166413 0.4028725074326113
66
+ Res-S87 0.0 0.2347382968690937 0.310184742428956 0.1945675289361726 0.1051904697076251 0.1553189620581523
67
+ Skin-S140 0.164855959242312 0.0 0.4783535413774468 0.0706488617867823 0.0783411198599754 0.2078005177334832
68
+ Skin-S142 0.0296771095312621 0.1471384223159231 0.5907375674070225 0.0700123550722771 0.0099600537132397 0.1524744919602752
69
+ Skin-S152 0.0151567614183942 0.2263800397392883 0.2927910296164512 0.1485905363162457 0.0 0.3170816329096206
70
+ Skin-S38 0.0947341158375671 0.0 0.1346190800905263 0.1032475400567342 0.008160689857306 0.6592385741578664
71
+ Skin-S43 0.0 0.0767485445801588 0.1824450247325599 0.0683586363212044 0.1251394115438924 0.547308382822184
72
+ Skin-S46 0.0 0.0387716364235693 0.4101163448720629 0.1315201353080304 0.1883390327260852 0.2312528506702521
73
+ Skin-S52 0.1111324496226963 0.0044774471620687 0.0816681777231102 0.0 0.2460216040413916 0.5567003214507331
74
+ Uri-S134 0.0347788048976236 0.185329703039419 0.3788961952988145 0.1018830893929257 0.0575180170252754 0.2415941903459415
75
+ Uri-S147 0.1776119824478155 0.0532406083186394 0.1471036743600634 0.0690291876290641 0.011170792117809 0.5418437551266084
76
+ Uri-S157 0.2255597884677406 0.1034334802150592 0.2822394991036401 0.1034154789698667 0.0096748241012879 0.2756769291424054
77
+ Uri-S20 0.0238068912280511 0.0387648177824184 0.3629943605646635 0.0616972627688762 0.0996088953431934 0.4131277723127971
78
+ Uri-S93 0.1237987007068542 0.0940741490317085 0.2588853333215661 0.0288172996748066 0.2707952034421179 0.2236293138229464
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot3/out_fractions/CIBERSORTx_Adjusted.txt ADDED
@@ -0,0 +1,78 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Mixture B cell DC Monocyte NK cell Other T cell P-value Correlation RMSE
2
+ Abd-PS04 0.07710134868493147 0.15035598059332517 0.62490042380648547 0.04725483367927080 0.06046264785737217 0.03992476537861495 9999.00000000000000000 0.80357568804142576 0.72387972464754313
3
+ Abd-PS05 0.40468617477334556 0.01189985030113097 0.17320000326017565 0.09603741594317640 0.19573026655467202 0.11844628916749948 9999.00000000000000000 0.56308846371347987 0.82623608437384843
4
+ Abd-PS07 0.01232722462958941 0.07539952702881515 0.03048626100747155 0.39864926144955448 0.00509536752071389 0.47804235836385556 9999.00000000000000000 0.83037077997169007 0.78073656439690686
5
+ Abd-PS19 0.11445268846057324 0.16124013370109616 0.17662093437016024 0.12586337196510977 0.05477899689932215 0.36704387460373844 9999.00000000000000000 0.81350717574852716 0.65674594778029272
6
+ Abd-PS20 0.59337477932871741 0.00000000000000000 0.00000000000000000 0.00000000000000000 0.00000000000000000 0.40662522067128259 9999.00000000000000000 0.89760658835810347 0.64266622739888846
7
+ Abd-PS23 0.34767828505519632 0.00000000000000000 0.13113985370065606 0.01026374426204396 0.23940281853430070 0.27151529844780292 9999.00000000000000000 0.73092263938648994 0.71438636031946268
8
+ Abd-PS27 0.01807894972870129 0.02351586528624109 0.08058870004059335 0.00000000000000000 0.09709385445397277 0.78072263049049151 9999.00000000000000000 0.57992756024125613 0.85941874158218523
9
+ Abd-S102 0.14215798445842598 0.10807315371970026 0.37345246333028748 0.04703274283799798 0.19702862931472659 0.13225502633886174 9999.00000000000000000 0.77489106984612433 0.63505323641800238
10
+ Abd-S103 0.08206381228775105 0.00000000000000000 0.15225596993313312 0.04590377262459192 0.45694087632613811 0.26283556882838582 9999.00000000000000000 0.77906287791624718 0.63387514208939999
11
+ Abd-S120 0.08149969321972217 0.12390780220045353 0.38008623661856911 0.15015997105826553 0.02693874418217015 0.23740755272081945 9999.00000000000000000 0.72051617200800089 0.69702366523859183
12
+ Abd-S123 0.07956077118057245 0.09846068209050977 0.41304445556206854 0.18802141089040009 0.15469751713404578 0.06621516314240336 9999.00000000000000000 0.44342161602388408 0.99189737087014973
13
+ Abd-S156 0.01029121048468112 0.16331985138286434 0.43699988893500930 0.09043018319177444 0.14931386970290808 0.14964499630276279 9999.00000000000000000 0.27991050814960866 1.15454149555512431
14
+ Abd-S39 0.05881524362546198 0.00095796974743488 0.48598050681300176 0.12675622088967162 0.22164752463631091 0.10584253428811898 9999.00000000000000000 0.42446895460057665 1.05482695830629902
15
+ Abd-S42 0.00000000000000000 0.13114247547297347 0.17844184343562083 0.28241226988760249 0.03132678599050180 0.37667662521330147 9999.00000000000000000 0.84497178952843055 0.65129549332124537
16
+ Abd-S47 0.16515660726755896 0.01916620006133699 0.02492237724539805 0.00000000000000000 0.00137086106487074 0.78938395436083519 9999.00000000000000000 0.76879066445470712 0.81728451987923723
17
+ Abd-S51 0.18933568790652905 0.19354352192501828 0.27104228019452631 0.09000672269617872 0.04780089284536738 0.20827089443238042 9999.00000000000000000 0.82277211902597736 0.58490050762751755
18
+ Abd-S54 0.08427700941455933 0.14307800041158864 0.15785760256203407 0.40447226705618139 0.03913130486548802 0.17118381569014854 9999.00000000000000000 0.92704450757832568 0.58329294413293764
19
+ Abd-S66 0.10892719427788784 0.03205804043111705 0.42770673858518682 0.26503322806109275 0.02834183525200734 0.13793296339270811 9999.00000000000000000 0.87569427323260407 0.48477302085355434
20
+ Abd-S79 0.10162003227107350 0.07085789445449396 0.40781344749328780 0.06625948828924251 0.00899628011671243 0.34445285737518994 9999.00000000000000000 0.94346700876251133 0.35774886535256945
21
+ Abd-S83 0.01235916718117875 0.16217421389416381 0.39999496916232224 0.09912255061704583 0.32634909914528931 0.00000000000000000 9999.00000000000000000 0.85480149494221924 0.52869701753198595
22
+ Abd-S98 0.00594830441738451 0.16921257437023154 0.42839183397735597 0.19937611234647290 0.07348735919471688 0.12358381569383829 9999.00000000000000000 0.82250339573418174 0.57340537864183616
23
+ HC01 0.04277963776926205 0.35427454585524876 0.01561854579070020 0.13687829639460686 0.00027536229907469 0.45017361189110749 9999.00000000000000000 0.88946744452928472 0.66254068523035936
24
+ HC05 0.07771412932683670 0.13094384021847330 0.00000000000000000 0.33076858977469203 0.00000000000000000 0.46057344067999800 9999.00000000000000000 0.89462106397722230 0.74936648517106486
25
+ HC07 0.00018573338769787 0.32193106347958705 0.05311969333948945 0.43057872864367419 0.00017860485761568 0.19400617629193584 9999.00000000000000000 0.86669443282593983 0.66097176672295388
26
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