Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261002T124820Z-crosscohort-liu-default/diffusion/dataset/server_1/dependency/2230423e2b80425c/hto_negative_sensitivity.csv

@@ -0,0 +1,66 @@
+sample_id,sc_sample,batch,hashtag,n_singlet_pass,n_negative_pass,subject_other_timepoints,r_own_singlet,r_own_singlet_plus_negative,r_best_other_timepoint_singlet,r_best_other_timepoint_singlet_plus_negative,r_own_negative,r_best_other_timepoint_negative,negative_fraction
+AA220014_HC,B1_AA220014_HC,B1,HTO1,419,0,0,0.9120275569757857,0.9120275569757857,,,,,0.0
+AA220534_HC,B1_AA220534_HC,B1,HTO2,353,0,0,0.8943471405211937,0.8943471405211937,,,,,0.0
+AA220907_HC,B1_AA220907_HC,B1,HTO2,381,0,0,0.8973958109669757,0.8973958109669757,,,,,0.0
+HGR0000071_T0,B1_HGR0000071_T0,B1,HTO1,341,0,0,0.9104367531753286,0.9104367531753286,,,,,0.0
+HGR0000074_T0,B1_HGR0000074_T0,B1,HTO2,335,0,0,0.9046007861238102,0.9046007861238102,,,,,0.0
+HGR0000078_T0,B1_HGR0000078_T0,B1,HTO2,184,0,1,0.8823941938636215,0.8823941938636215,0.8840970213012478,0.8840970213012478,,,0.0
+HGR0000078_T1,B1_HGR0000078_T1,B1,HTO1,199,0,1,0.890330472038027,0.890330472038027,0.8865454018414631,0.8865454018414631,,,0.0
+HGR0000079_T0,B1_HGR0000079_T0,B1,HTO2,114,0,1,0.8767500396662142,0.8767500396662142,0.8668462557484701,0.8668462557484701,,,0.0
+HGR0000079_T1,B1_HGR0000079_T1,B1,HTO1,141,0,1,0.8999989251374636,0.8999989251374636,0.8885210796529021,0.8885210796529021,,,0.0
+HGR0000083_T0,B1_HGR0000083_T0,B1,HTO2,158,0,1,0.8711563897960811,0.8711563897960811,0.8691122053331608,0.8691122053331608,,,0.0
+HGR0000083_T1,B1_HGR0000083_T1,B1,HTO1,299,0,1,0.9149860794349103,0.9149860794349103,0.9028820393691692,0.9028820393691692,,,0.0
+HGR0000089_T1,B1_HGR0000089_T1,B1,HTO1,358,0,0,0.915432150012015,0.915432150012015,,,,,0.0
+HGR0000091_T0,B1_HGR0000091_T0,B1,HTO1,362,0,0,0.910285403729192,0.910285403729192,,,,,0.0
+HGR0000093_T0,B1_HGR0000093_T0,B1,HTO2,451,0,1,0.895421292495562,0.895421292495562,0.8813017285122986,0.8813017285122986,,,0.0
+HGR0000093_T1,B1_HGR0000093_T1,B1,HTO1,152,0,1,0.8925030873875294,0.8925030873875294,0.8826524117196437,0.8826524117196437,,,0.0
+HGR0000098_T0,B1_HGR0000098_T0,B1,HTO1,390,0,0,0.9044002350301212,0.9044002350301212,,,,,0.0
+HGR0000110_T0,B1_HGR0000110_T0,B1,HTO2,128,0,0,0.8655193640540487,0.8655193640540487,,,,,0.0
+HGR0000136_T0,B1_HGR0000136_T0,B1,HTO1,317,0,0,0.9026061540533303,0.9026061540533303,,,,,0.0
+HGR0000137_T0,B1_HGR0000137_T0,B1,HTO1,314,0,0,0.9048554333348998,0.9048554333348998,,,,,0.0
+HGR0000141_T0,B1_HGR0000141_T0,B1,HTO2,240,0,0,0.9114922629903991,0.9114922629903991,,,,,0.0
+HGR0000143_T0,B1_HGR0000143_T0,B1,HTO2,280,0,0,0.8971200503657939,0.8971200503657939,,,,,0.0
+IM000040_HC,B1_IM000040_HC,B1,HTO1,373,0,0,0.9086489334307604,0.9086489334307604,,,,,0.0
+HGR0000042_T0,B2_HGR0000042_T0,B2,HTO3,2213,1066,1,0.9205327720619861,0.9207084630107026,0.919990015357374,0.9199016338096678,0.8993551315262752,0.8986611207362573,0.3250991155840195
+HGR0000042_T1,B2_HGR0000042_T1,B2,HTO2,4514,26,1,0.9181139946990966,0.9181033373414758,0.9142769241251739,0.9142979731755523,,,0.005726872246696035
+HGR0000069_T0,B2_HGR0000069_T0,B2,HTO2,4419,22,2,0.9118711148650109,0.9118770513649356,0.904367789915921,0.9043734158651311,,,0.004953839225399685
+HGR0000069_T1,B2_HGR0000069_T1,B2,HTO1,4418,750,2,0.9176168642042979,0.9169135244206555,0.9125311477553688,0.9134006635346997,0.8757872278131503,0.8975865922475575,0.14512383900928794
+HGR0000069_T2,B2_HGR0000069_T2,B2,HTO3,2351,1779,2,0.9181775505185841,0.9173343407546348,0.911799084534696,0.9130078880560573,0.9013359537632872,0.9023625839417668,0.43075060532687653
+HGR0000092_T0,B2_HGR0000092_T0,B2,HTO1,5316,188,1,0.9164980322287054,0.9163287169301404,0.9126297257256321,0.9123120897627777,0.8725911474239706,0.8625985239342566,0.034156976744186045
+HGR0000092_T1,B2_HGR0000092_T1,B2,HTO3,2917,1402,1,0.9188260489553449,0.9216130673831675,0.902676770120154,0.9084993823031587,0.906447833169003,0.9049711419004103,0.32461217874507986
+HGR0000094_T0,B2_HGR0000094_T0,B2,HTO2,3045,21,1,0.9162173464313692,0.916254018955529,0.9062512330792505,0.906280433302709,,,0.00684931506849315
+HGR0000094_T1,B2_HGR0000094_T1,B2,HTO3,908,839,1,0.912725261101148,0.9164739160818323,0.9019433247913221,0.9092307394834481,0.9007497729194549,0.9021014988286192,0.48025186033199774
+HGR0000115_T1,B2_HGR0000115_T1,B2,HTO2,5186,23,0,0.9088040576661327,0.9088175498378526,,,,,0.004415434824342484
+HGR0000124_T0,B2_HGR0000124_T0,B2,HTO2,8731,53,1,0.9184093950021769,0.9183743263139074,0.9212202435611357,0.9212015512046017,0.8298088773693197,0.8369366906417111,0.006033697632058288
+HGR0000124_T1,B2_HGR0000124_T1,B2,HTO3,2515,1299,1,0.9232669316979084,0.9224220710689774,0.9209531306106266,0.9180899402314918,0.8973965034207514,0.8860882767304588,0.34058730991085473
+HGR0000144_T0,B2_HGR0000144_T0,B2,HTO3,2243,1967,1,0.9192216051891234,0.9170635631914599,0.9073456950054377,0.9076134907199294,0.8974607910681761,0.8946406460603101,0.4672209026128266
+HGR0000144_T2,B2_HGR0000144_T2,B2,HTO1,6257,792,1,0.9100250724330694,0.9092207788673247,0.9106795430633996,0.9096789220808821,0.8845434722771575,0.8826367552276643,0.11235636260462477
+HGR0000391_T0,B2_HGR0000391_T0,B2,HTO1,6728,49,0,0.9178326683472159,0.917839278132285,,,,,0.007230337907628745
+HGR0000395_T0,B2_HGR0000395_T0,B2,HTO3,2786,1149,0,0.9209327163993595,0.9200342281927791,,,0.8953139945466639,,0.29199491740787803
+HGR0000418_T1,B2_HGR0000418_T1,B2,HTO1,6151,314,0,0.9159345393363918,0.9156159534100166,,,0.8813496668303675,,0.048569218870843
+SHD2_HC,B2_SHD2_HC,B2,HTO3,3484,2152,0,0.9168680720328,0.9155916375062434,,,0.9050625374708172,,0.38183108587650816
+SHD4_HC,B2_SHD4_HC,B2,HTO1,7126,32,0,0.9164626855679523,0.9164718778052282,,,,,0.0044705224923162895
+SHD7_HC,B2_SHD7_HC,B2,HTO2,6375,20,0,0.920604031788875,0.9206028980179839,,,,,0.003127443315089914
+HGR0000051_T0,B3_HGR0000051_T0,B3,HTO3,2947,0,3,0.9270135222479353,0.9270135222479353,0.916693168103551,0.916693168103551,,,0.0
+HGR0000051_T1,B3_HGR0000051_T1,B3,HTO2,4888,0,3,0.9170186968473237,0.9170186968473237,0.9189223656842437,0.9189223656842437,,,0.0
+HGR0000051_T2,B3_HGR0000051_T2,B3,HTO5,2109,1961,3,0.9106703933074453,0.918304908334096,0.9018909691700966,0.9106692550195792,0.9088176927317742,0.903588209116847,0.4818181818181818
+HGR0000051_T3,B3_HGR0000051_T3,B3,HTO1,5007,0,3,0.9203467390374308,0.9203467390374308,0.9104499535287408,0.9104499535287408,,,0.0
+HGR0000101_T0,B3_HGR0000101_T0,B3,HTO5,920,961,2,0.9206219828279479,0.9197967363776232,0.919019630352349,0.9162016111339526,0.903545643123976,0.8970289947790081,0.5108984582668793
+HGR0000101_T1,B3_HGR0000101_T1,B3,HTO1,4781,0,2,0.917988550047164,0.917988550047164,0.9185369756943689,0.9185369756943689,,,0.0
+HGR0000101_T3,B3_HGR0000101_T3,B3,HTO3,3855,0,2,0.9233374105758898,0.9233374105758898,0.9153039242524501,0.9153039242524501,,,0.0
+HGR0000102_T0,B3_HGR0000102_T0,B3,HTO3,4533,0,1,0.9212445221896836,0.9212445221896836,0.9134311302759694,0.9134311302759694,,,0.0
+HGR0000102_T1,B3_HGR0000102_T1,B3,HTO1,5393,0,1,0.922515669560919,0.922515669560919,0.9120789099419572,0.9120789099419572,,,0.0
+HGR0000134_T0,B3_HGR0000134_T0,B3,HTO2,5941,0,1,0.9206195454411771,0.9206195454411771,0.9236242342099397,0.9236242342099397,,,0.0
+HGR0000134_T1,B3_HGR0000134_T1,B3,HTO5,2705,3488,1,0.9228285814112256,0.9245128288611211,0.9204752962173097,0.9194515708027474,0.9124744998255115,0.9043216742884316,0.5632165347973519
+HGR0000135_T0,B3_HGR0000135_T0,B3,HTO2,5972,0,1,0.9189061026306083,0.9189061026306083,0.9073274567441918,0.9073274567441918,,,0.0
+HGR0000135_T1,B3_HGR0000135_T1,B3,HTO3,4829,0,1,0.927946347521014,0.927946347521014,0.9136010397269133,0.9136010397269133,,,0.0
+HGR0000142_T0,B3_HGR0000142_T0,B3,HTO5,2766,2127,0,0.9226197735477738,0.9221769466094303,,,0.9004091866102479,,0.4347026364193746
+HGR0000392_T0,B3_HGR0000392_T0,B3,HTO1,5261,0,1,0.9225703741570761,0.9225703741570761,0.9142397160257502,0.9142397160257502,,,0.0
+HGR0000392_T3,B3_HGR0000392_T3,B3,HTO5,1413,3297,1,0.9163131467679478,0.9173512152207038,0.9144360769861027,0.9117415022793796,0.9103458219614637,0.9021617390217525,0.7
+HGR0000429_T1,B3_HGR0000429_T1,B3,HTO2,7249,0,1,0.9137762449296184,0.9137762449296184,0.9202017550789834,0.9202017550789834,,,0.0
+HGR0000429_T2,B3_HGR0000429_T2,B3,HTO3,4895,0,1,0.9219039547408714,0.9219039547408714,0.9129929404447065,0.9129929404447065,,,0.0
+HGR0000430_T1,B3_HGR0000430_T1,B3,HTO5,1875,1390,0,0.92231915994551,0.9259624158704877,,,0.9057918570692051,,0.42572741194486985
+SHD1_HC,B3_SHD1_HC,B3,HTO2,6174,0,0,0.9107516826560406,0.9107516826560406,,,,,0.0
+SHD3_HC,B3_SHD3_HC,B3,HTO3,5175,0,0,0.9174902204553892,0.9174902204553892,,,,,0.0
+SHD5_HC,B3_SHD5_HC,B3,HTO1,6397,0,0,0.9161649829103526,0.9161649829103526,,,,,0.0
+SHD6_HC,B3_SHD6_HC,B3,HTO5,2487,2909,0,0.9165009806596449,0.9146002225034535,,,0.9054031027218074,,0.5391030392883618