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Archive 1 checkpoints (1-1)

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paper-releases/pbisc-diffusion/updates/20261005T133325Z-deck-scratch-samepairs-tracking/diffusion/metadata/NOTE.md ADDED
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+ # PBISC-diffusion update 20261005T133325Z-deck-scratch-samepairs-tracking
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+ Paper deck updated with the results so far (42 slides): new slides 'No pretraining: same cohort, from scratch' (sepsis fold-0 pilot), 'No pretraining: other cohorts, from scratch' (held-out sepsis pilot, masked rescore of every arm) and 'Same training pairs: LoRA vs scSemiProfiler' (5-fold CV, ImMicro + Ji scored, others in progress, GPU hours per fold); 'Pairs needed' and '5-fold CV' slides now draw the scSemiProfiler budget/CV runs; agenda item 7 updated. Archive gaps found by a drift check are included: the 10-05 cross-cohort from-scratch pilot (run receipts, milestone scores, masked rescore scores and receipts, changed LOCO tools, scratch queue) and the Ji scSemiProfiler CV contrast extras. Generated NPZs and checkpoints are locations only.
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+ Payload states are recorded as supplied. Inference locations are pointers, not archived generated outputs.