junidude14 commited on
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Archive 4 checkpoints (1-4)

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paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_imperial_eskd_fewshot2.log ADDED
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+ {"dataset": "imperial_eskd", "kind": "fewshot", "idx": 2, "n_reference_samples": 15, "n_mixture_samples": 142, "reference_cells": 33850, "states": 29, "genes_kept": 5598, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_imperial_eskd_fewshot2_full.log ADDED
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+ Traceback (most recent call last):
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+ File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 90, in <module>
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+ sys.exit(main())
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+ ^^^^^^
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+ File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 59, in main
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+ gcols = np.asarray([gpos[g] for g in ag["gene_ids"].astype(str)], dtype=np.int64)
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+ ~~^^^^^^^^^^^^
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+ File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_npyio_impl.py", line 257, in __getitem__
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+ return format.read_array(
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+ ^^^^^^^^^^^^^^^^^^
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+ File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_format_impl.py", line 833, in read_array
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+ raise ValueError("Object arrays cannot be loaded when "
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+ ValueError: Object arrays cannot be loaded when allow_pickle=False
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+ {"dataset": "imperial_eskd", "kind": "fewshot", "idx": 2, "n_reference_samples": 15, "n_mixture_samples": 142, "reference_cells": 33850, "states": 29, "genes_kept": 15513, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_imperial_eskd_fewshot3.log ADDED
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+ {"dataset": "imperial_eskd", "kind": "fewshot", "idx": 3, "n_reference_samples": 12, "n_mixture_samples": 145, "reference_cells": 34467, "states": 28, "genes_kept": 5620, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_imperial_eskd_fewshot3_full.log ADDED
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+ Traceback (most recent call last):
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+ File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 90, in <module>
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+ sys.exit(main())
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+ ^^^^^^
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+ File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 59, in main
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+ gcols = np.asarray([gpos[g] for g in ag["gene_ids"].astype(str)], dtype=np.int64)
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+ ~~^^^^^^^^^^^^
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+ File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_npyio_impl.py", line 257, in __getitem__
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+ return format.read_array(
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+ ^^^^^^^^^^^^^^^^^^
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+ File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_format_impl.py", line 833, in read_array
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+ raise ValueError("Object arrays cannot be loaded when "
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+ ValueError: Object arrays cannot be loaded when allow_pickle=False
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+ {"dataset": "imperial_eskd", "kind": "fewshot", "idx": 3, "n_reference_samples": 12, "n_mixture_samples": 145, "reference_cells": 34467, "states": 28, "genes_kept": 15618, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}