Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/archive/20261012T130738Z-strictpairs-implementation/snapshot/data/external_refcal/ye2026_sepsis/BUILD.json

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+{
+  "schema": "pbisc.strict.external-reference.v1",
+  "cohort": "ye2026_sepsis",
+  "input_hashes": {
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/features.npz": "0cfda4b0cf1caf5e5319d071697c228d894e992fd090e2b3ed450bd6c9887d46",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/folds.csv": "da730548950f084c76ab4325f98efa51966ee2f874f9df2ced9ebe649fc28308",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/refcal/reference/aifi_donor_pseudobulk_20097.npz": "f7c7223f0dbfffc20c9137a1ec5b6a2436b27de5a5ae6f15d1686918b6baa564",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/protocol/PROTOCOL.json": "0ec308ab9867d4421c57db54611b67576f73f66fab6744c40288c74897c15a74"
+  },
+  "outputs": {
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_refcal.npz": "3886924bfe4926914677850db7dac8a77a38bb0c0fc1a30ee663b2587eabc7dd",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/conditions_raw.npz": "36add186da47d10c067d7a1f0641fabf3ddba64d5e65168c5975e1e3a448c9cd",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/external_refcal/ye2026_sepsis/alpha.npy": "5982b5f14b208cc91558d7a061f5b29bcb591fba821397ea0cc9004246fe4993"
+  },
+  "target_bulk_anchor_sample_ids": [
+    "Abd-PS04",
+    "Abd-PS05",
+    "Abd-PS07",
+    "Abd-PS19",
+    "Abd-PS20",
+    "Abd-PS23",
+    "Abd-PS27",
+    "Abd-S102",
+    "Abd-S103",
+    "Abd-S120",
+    "Abd-S123",
+    "Abd-S156",
+    "Abd-S39",
+    "Abd-S42",
+    "Abd-S47",
+    "Abd-S51",
+    "Abd-S54",
+    "Abd-S57",
+    "Abd-S66",
+    "Abd-S79",
+    "Abd-S83",
+    "Abd-S98",
+    "HC01",
+    "HC05",
+    "HC07",
+    "HC09",
+    "HC12",
+    "HC13",
+    "HC16",
+    "IC10",
+    "IC15",
+    "IC16",
+    "IC19",
+    "IC22",
+    "IC23",
+    "PHC01",
+    "PHC02",
+    "PHC03",
+    "PHC05",
+    "PIC01",
+    "PIC02",
+    "PIC04",
+    "PIC05",
+    "Res-PS02",
+    "Res-PS03",
+    "Res-PS12",
+    "Res-PS16",
+    "Res-PS21",
+    "Res-PS22",
+    "Res-PS25",
+    "Res-PS26",
+    "Res-S10",
+    "Res-S125",
+    "Res-S127",
+    "Res-S136",
+    "Res-S139",
+    "Res-S146",
+    "Res-S149",
+    "Res-S150",
+    "Res-S164",
+    "Res-S166",
+    "Res-S174",
+    "Res-S177",
+    "Res-S184",
+    "Res-S19",
+    "Res-S26",
+    "Res-S40",
+    "Res-S77",
+    "Res-S87",
+    "Skin-S140",
+    "Skin-S142",
+    "Skin-S152",
+    "Skin-S38",
+    "Skin-S43",
+    "Skin-S46",
+    "Skin-S52",
+    "Skin-S74",
+    "Uri-S134",
+    "Uri-S147",
+    "Uri-S157",
+    "Uri-S20",
+    "Uri-S93"
+  ],
+  "target_sc_expression_accessed": false,
+  "output_assay_mask_source": "pre-existing structural assay metadata; no expression/depth fitting",
+  "reference": "external AIFI donor-mean CPM",
+  "reference_donors": 108,
+  "paired_target_samples_used": 0,
+  "transductive_target_bulk": true,
+  "K_cond": 1000,
+  "rho": 3869.603120208939,
+  "N_gen": 1500,
+  "alpha_genes": 11128
+}

paper-releases/pbisc-diffusion/updates/20261012T130738Z-strictpairs-implementation/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/data/external_refcal/ji2025_chili/conditions_refcal.npz

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