Back up completed PBISC same-panel trunk4x evidence
Browse files
campaigns/f01-6k-trunk4x-20261013/CONTRACT.json
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{
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"scope": "f01 exact 6k gene context; trunk width only scientific change",
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"execution_host": "server_1",
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"host_reason": "server_2 busy, server_1 queue required too",
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"diff": [
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{
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"field": "experiment_id",
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"baseline": "f01_6k_1x_seed20260627",
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"new": "f01_6k_trunk4x_seed20260627"
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},
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{
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"field": "model.hidden_dims",
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"baseline": [
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1024,
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1024,
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512,
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256
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],
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"new": [
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4096,
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4096,
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2048,
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1024
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]
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},
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{
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"field": "paths.output_dir",
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"baseline": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627",
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"new": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/payload/pretrain/f01_6k_trunk4x_seed20260627"
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},
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{
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"field": "training.max_cuda_memory_gib",
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"baseline": 8.0,
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"new": 24.0
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}
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],
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"sources": {
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/floor01_campaign_20260923/configs/6k_1x.json": "0a8e9a0ce0b82d136d3e439cbca6d6d61ed7f6b8a8f935cedd69d8c65fb15abd",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/data_audit.json": "55c0616589aae1076bb8e1bb8a0212f970bc6a45324cd0079b36eceb2c810d4c",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/ALLCELL_DATA_CONTRACT.json": "461b46107f75984000747877a11823ec15042b5c2104b4b979729dcee10ee30f",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/EPOCH_SCHEDULE.json": "ae4e69c2181a420cab62078b999327991d575459e5ef97de0af7895512ad8b16",
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| 42 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/artifacts/panel_ladder_floor01_1m_20260923/tiers/6k/gene_positions.npy": "653ffa45ac519000baa41086c52408009391d6e68cfb218bc6a50d34163fcb24",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/artifacts/panel_ladder_floor01_1m_20260923/tiers/6k/legacy_selection_manifest.v1.json": "1a6090d312df7d0071b3adaa59bb686a915b996a6c555a9aef9cab151905900a",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/full_recipe_allcells_6k_broad_20260909/coverage_v1/summary.json": "3904c5b4026f3a5358d6553948f0d4456c80494eab941ab2f7c2975f459d24c5",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/full_recipe_allcells_6k_broad_20260909/topup_v1/manifest.json": "df300a6f7f758c865209c6640e51abcbec10bab9726ee48c3bc3434936316da1",
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| 46 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_7_no_annotation_sh_hwang/runs/E2_full_no_annotation_4epoch_seed20260627/conditioner_cache.pt": "81ba53ed96fab03ccb3387cd7d8faebcc5d6db53160428fee5ac36f39b888584",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/scripts/train_allcell_sdd.py": "1d53e16cdb6749553aa0196cfe36673e336de2e40ba61d20bec11ebf09c47536",
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| 48 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/__init__.py": "46c7212b637e67f2b44b616fef47f964a284b576ba56c372f71463ce46ea24ee",
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| 49 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/data.py": "0d959a35175549a263e1b23c2709bfe2699dc293141d5699f01cf70cd7a0ba73",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/diffusion.py": "ed97ca9fe56b9328da9ee455d4fbfc4b5102dfcf4f2364363bb715d19610429f",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/ema.py": "dcc982725b7f94986b4b13b782c7a587b9efcf06d4fd444e9bf51bca051940c1",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/experiment.py": "5e4f6169410fa165e5b1c39391ab731c38c32b7d3202618da326b2f82131e6de",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/fast_rows.py": "83cb181499903d20d5aeb58a3e978af5cf132751057561d12f5920ce23378c60",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/gene_selection.py": "6818525e212b2192e40e7b9f5f879e29f644c17a099aa09a6ab2adb66f1b7e7d",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/ladder_experiment.py": "872bf059e14f0042eec64d290cb84685dafd9705ae364125462d1d8e06e14314",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/panel_ladder.py": "45116a496e1f38247dfdaa3d306ab54aa28e13736754dbe9dd75eaa5dc7d518f",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/src/pbisc_sdd/proportion_hint.py": "7a352d73728e78c9d262e29c35628d2437af0bc7743b88c077ba81d911dd2a52",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_7_no_annotation_sh_hwang/src/model7_no_annotation/__init__.py": "1f567f653ae9a20b54094fae53c3ab00b3f1ac2fe4f456f5d31fe5c343b095ca",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_7_no_annotation_sh_hwang/src/model7_no_annotation/latent_regularization.py": "e65226750a083f59711ae95afe17c03190481bdac921a8e4a2dd84554aa676bf",
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_7_no_annotation_sh_hwang/src/model7_no_annotation/model.py": "8227adf8fe1d28b2f71a5e626ae8e39448bef2d00b75a27fd60a06259bea45b1"
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| 64 |
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},
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| 65 |
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"configs": {
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| 66 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/configs/baseline_1x.json": "0a8e9a0ce0b82d136d3e439cbca6d6d61ed7f6b8a8f935cedd69d8c65fb15abd",
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| 67 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/configs/train.json": "af2fb079cf0b633a1a1e6481c9adfaf0e181c37db3ebd6f18714ee8a8f481789",
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| 68 |
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"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/configs/profile.json": "28794ea42035de7225b8a812181b83932bf6604b5462e497e82af8dc5a017cd3"
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| 69 |
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},
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| 70 |
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"base_checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
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| 71 |
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"pretrain_output": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/f01_trunk4x_complete_20261013/payload/pretrain/f01_6k_trunk4x_seed20260627",
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| 72 |
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"final_epoch": 16,
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| 73 |
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"no_automatic_failure_restart": true
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}
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