Archive 4 checkpoints (1-4)

paper-releases/20260928/diffusion/data/inference_inputs/server_1/artifacts/gse135779_scsemi_split_target42_20260913/benchmark_crosscheck.json

@@ -0,0 +1,15 @@
+{
+  "benchmark_genes_absent_from_canonical_panel": 62,
+  "benchmark_genes_present_in_canonical_20097_panel": 5938,
+  "benchmark_genes_resolved_to_ensembl_via_raw_gene_index": 6000,
+  "benchmark_working_genes": 6000,
+  "compared_cells_per_donor_matches_benchmark_n_cells": true,
+  "compared_matrix_shape": [
+    42,
+    5938
+  ],
+  "conclusion": "our full-panel donor bulk equals the benchmark donor pseudobulk on every shared gene, so both are sums over exactly the same target-truth cells",
+  "exact_elementwise_equality": true,
+  "max_absolute_difference": 0.0,
+  "schema_version": "pbisc_sdd.gse135779_scsemi_target42_crosscheck.v1"
+}

paper-releases/20260928/diffusion/data/inference_inputs/server_1/artifacts/gse135779_scsemi_split_target42_20260913/donor_conditions.npz

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+size 1789750

paper-releases/20260928/diffusion/data/inference_inputs/server_1/artifacts/gse135779_scsemi_split_target42_20260913/donors.csv

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paper-releases/20260928/diffusion/data/inference_inputs/server_1/artifacts/gse135779_scsemi_split_target42_20260913/external_contract_validation.json

@@ -0,0 +1,32 @@
+{
+  "adapter": "SimpleNamespace streams adapter (tests/test_experiment.py::_external_streams pattern) carrying the real 20,097-gene canonical panel, the real 2,000-gene checkpoint panel_positions, and the real Model 7 conditioner replayed on CPU",
+  "base_conditions_finite": true,
+  "base_conditions_shape": [
+    42,
+    2006
+  ],
+  "bulk_measurement_fraction_shape": [
+    42,
+    2000
+  ],
+  "cells_per_bulk_all_equal": 1500,
+  "cells_per_bulk_shape": [
+    42
+  ],
+  "input_sha256": "a5b2f51132f19e98917f9d53ee05e86dc22322e497d9701dec1ac1eec24df628",
+  "loader": "pbisc_sdd.experiment.load_external_bulk_conditions",
+  "output_availability_mask_shape": [
+    42,
+    2000
+  ],
+  "recipe_k_matches_donor_cell_counts": true,
+  "recipe_k_shape": [
+    42
+  ],
+  "sample_ids_match_donor_order": true,
+  "sample_ids_shape": [
+    42
+  ],
+  "schema_version": "pbisc_sdd.gse135779_scsemi_target42_validation.v1",
+  "status": "PASS"
+}