Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_ji2025_chili_fewshot4.log

@@ -0,0 +1 @@
+{"dataset": "ji2025_chili", "kind": "fewshot", "idx": 4, "n_reference_samples": 9, "n_mixture_samples": 24, "reference_cells": 37876, "states": 29, "genes_kept": 5694, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_ji2025_chili_fewshot4_full.log

@@ -0,0 +1,14 @@
+Traceback (most recent call last):
+  File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 90, in <module>
+    sys.exit(main())
+             ^^^^^^
+  File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 59, in main
+    gcols = np.asarray([gpos[g] for g in ag["gene_ids"].astype(str)], dtype=np.int64)
+                                         ~~^^^^^^^^^^^^
+  File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_npyio_impl.py", line 257, in __getitem__
+    return format.read_array(
+           ^^^^^^^^^^^^^^^^^^
+  File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_format_impl.py", line 833, in read_array
+    raise ValueError("Object arrays cannot be loaded when "
+ValueError: Object arrays cannot be loaded when allow_pickle=False
+{"dataset": "ji2025_chili", "kind": "fewshot", "idx": 4, "n_reference_samples": 9, "n_mixture_samples": 24, "reference_cells": 37876, "states": 29, "genes_kept": 15934, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_ye2026_sepsis_cv0_full.log

@@ -0,0 +1,14 @@
+Traceback (most recent call last):
+  File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 90, in <module>
+    sys.exit(main())
+             ^^^^^^
+  File "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/bayesprism_paired_20261006/tools/build_split.py", line 59, in main
+    gcols = np.asarray([gpos[g] for g in ag["gene_ids"].astype(str)], dtype=np.int64)
+                                         ~~^^^^^^^^^^^^
+  File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_npyio_impl.py", line 257, in __getitem__
+    return format.read_array(
+           ^^^^^^^^^^^^^^^^^^
+  File "/home/sj_server_1/miniforge3/envs/cxg_corpus/lib/python3.11/site-packages/numpy/lib/_format_impl.py", line 833, in read_array
+    raise ValueError("Object arrays cannot be loaded when "
+ValueError: Object arrays cannot be loaded when allow_pickle=False
+{"dataset": "ye2026_sepsis", "kind": "cv", "idx": 0, "n_reference_samples": 65, "n_mixture_samples": 17, "reference_cells": 457849, "states": 29, "genes_kept": 17399, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/logs/split_ye2026_sepsis_cv1.log

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+{"dataset": "ye2026_sepsis", "kind": "cv", "idx": 1, "n_reference_samples": 65, "n_mixture_samples": 17, "reference_cells": 461349, "states": 29, "genes_kept": 5889, "types": ["B cell", "DC", "Monocyte", "NK cell", "Other", "T cell"]}