Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261005T133325Z-deck-scratch-samepairs-tracking/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_masked/ye2026_sepsis/locoL_scratchsat_s50000_K1000/per_donor.csv

@@ -0,0 +1,83 @@
+arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
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paper-releases/pbisc-diffusion/updates/20261005T133325Z-deck-scratch-samepairs-tracking/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_masked/ye2026_sepsis/locoL_scratchsat_s50000_K1000/summary.json

@@ -0,0 +1,767 @@
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paper-releases/pbisc-diffusion/updates/20261005T133325Z-deck-scratch-samepairs-tracking/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_masked/ye2026_sepsis/report_table_20261005.csv

@@ -0,0 +1,12 @@
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+"pretrained + LoRA, own 58 pairs (in-cohort, 5-fold)",0.3618,0.8278,0.943,0.8907,10,0.7173,0.5257,0.4661,25,18.4837,1881.0
+"pretrained + LoRA, own 5 pairs (in-cohort)",0.4292,0.7602,0.922,0.8773,3,0.6212,0.289,0.2487,4,17.248,1785.0
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+"pretrained + LoRA r16, other cohorts",0.4908,0.3448,0.5747,0.8656,7,0.5516,0.1065,0.0558,4,18.313,1135.0
+"pretrained + LoRA r64, other cohorts",0.5684,0.2841,0.482,0.8625,7,0.5284,0.2263,0.1773,4,16.3374,1012.0
+"pretrained + full FT, other cohorts",0.5847,0.3404,0.55,0.8771,8,0.5166,0.0844,0.0127,3,15.852,1055.0
+"scratch, other cohorts, 50k",0.4919,0.3385,0.6015,0.9023,8,0.5346,0.2467,0.2093,2,18.2098,1126.0
+"scratch, other cohorts, 100k",0.4966,0.3426,0.6022,0.8954,9,0.5326,0.245,0.2082,1,18.6073,1054.0
+"scratch, other cohorts, 150k",0.5095,0.3302,0.5858,0.8972,8,0.5073,0.2474,0.2004,1,20.0911,1047.0
+"scratch, other cohorts, 162k (final)",0.4994,0.3277,0.5946,0.8947,7,0.5214,0.2285,0.1857,1,16.9244,1040.0

paper-releases/pbisc-diffusion/updates/20261005T133325Z-deck-scratch-samepairs-tracking/diffusion/dataset/server_1/model8/plans/paired_crosscohort_20261002/scores_masked/ye2026_sepsis/table.csv

@@ -0,0 +1,15 @@
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