junidude14 commited on
Commit
d54cbe6
·
verified ·
1 Parent(s): 74d345e

Archive 4 checkpoints (1-4)

Browse files
paper-releases/pbisc-diffusion/updates/20261008T050202Z-scsemi-imperial-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/scsemi_cv_20261002/fold0/contrast.csv ADDED
@@ -0,0 +1,14 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
2
+ scsemi__raw,T cell,mean_cp10k,3063,0.588707229448179,0.5453624372893018,0.44598142164322135,0.4770471672289242,37,7,37,7,43376,36674,,,,,,,,,,,
3
+ scsemi__raw,T cell,pseudobulk_log1p_cpm,3063,0.31601729362608816,0.4537812836732842,0.14433306365829732,0.442190853697175,37,7,37,7,43376,36674,,,,,,,,,,,
4
+ scsemi__raw,B cell,mean_cp10k,3238,0.2982556585812344,0.3753258490057728,0.16107339868782833,0.43683700274204557,37,7,36,7,12740,6587,,,,,,,,,,,
5
+ scsemi__raw,B cell,pseudobulk_log1p_cpm,3238,0.1395172101996321,0.2602705853790834,0.07017144060142008,0.2866535221105436,37,7,36,7,12740,6587,,,,,,,,,,,
6
+ scsemi__raw,Monocyte,mean_cp10k,2821,0.6120384529066569,0.6803567857715679,0.4184054974719465,0.512593487575442,36,7,36,7,15344,9800,,,,,,,,,,,
7
+ scsemi__raw,Monocyte,pseudobulk_log1p_cpm,2821,0.2618220859350989,0.565945711695303,0.05772121059544606,0.38502453694606614,36,7,36,7,15344,9800,,,,,,,,,,,
8
+ scsemi__raw,NK cell,mean_cp10k,3042,0.4734393012388788,0.5191528133477931,0.3263465236017029,0.42582654102460116,37,7,34,7,10153,8954,,,,,,,,,,,
9
+ scsemi__raw,NK cell,pseudobulk_log1p_cpm,3042,0.182432249856203,0.3578951878164137,0.07522922639005733,0.3240518744032764,37,7,34,7,10153,8954,,,,,,,,,,,
10
+ scsemi__raw,T cell,welch_top50_deg,5927,,,,,37,7,37,7,43376,36674,True,0,0.0,0,7,0,7,0,0.0,50,234
11
+ scsemi__raw,B cell,welch_top50_deg,5927,,,,,37,7,36,7,12740,6587,True,0,0.0,50,11,58,11,0,0.0,50,234
12
+ scsemi__raw,Monocyte,welch_top50_deg,5927,,,,,36,7,36,7,15344,9800,True,0,0.0,50,19,89,19,2,0.02040816326530612,50,234
13
+ scsemi__raw,NK cell,welch_top50_deg,5927,,,,,37,7,34,7,10153,8954,True,0,0.0,26,10,26,10,2,0.02702702702702703,50,234
14
+ scsemi__raw,DC,welch_top50_deg,5927,,,,,37,7,36,7,2139,1940,True,1,0.022222222222222223,33,13,33,13,3,0.0375,50,234
paper-releases/pbisc-diffusion/updates/20261008T050202Z-scsemi-imperial-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/scsemi_cv_20261002/fold0/per_donor.csv ADDED
@@ -0,0 +1,48 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
2
+ scsemi__raw,C21_1004,covid_positive,1500,5552,150,1.0,0.8982348703170029,0.0,0.08609510086455331,0.0,0.0,0.0,0.0111671469740634,0.0,0.0005403458213256485,0.0,0.003962536023054755,0.20353025936599423,0.9006941377917516,0.49075127993310036,9,False,0.22666666666666666,0.06,0.7266666666666667,0.03333333333333333,0.0,0.0,1367.0,1563.5
3
+ scsemi__raw,C21_1704,covid_positive,1500,4570,150,0.9606666666666667,0.7275711159737418,0.03266666666666666,0.2214442013129103,0.0033333333333333335,0.004814004376367615,0.0,0.022319474835886213,0.002,0.011816192560175055,0.0013333333333333333,0.012035010940919038,0.4661911013858498,0.6972967656070341,0.5210653189678021,10,False,0.7,0.02,0.8666666666666667,0.17333333333333334,0.33333333333333337,0.48140043763676155,1367.0,2131.0
4
+ scsemi__raw,C21_2504,covid_positive,1500,5048,150,0.45866666666666667,0.7567353407290016,0.0033333333333333335,0.12361331220285261,0.16666666666666666,0.06220285261489699,0.0,0.039619651347068144,0.0006666666666666666,0.011687797147385102,0.37066666666666664,0.006141045958795562,0.9379788695192816,0.617695078615749,0.47695067686585674,1,True,0.7133333333333334,0.0,0.6533333333333333,0.22,16.666666666666664,6.220285261489699,1366.0,2692.5
5
+ scsemi__raw,C34_1404,covid_positive,1500,2483,150,0.6006666666666667,0.8771647200966572,0.15266666666666667,0.01973419250906162,0.12733333333333333,0.016915022150624244,0.09066666666666667,0.07047925896093435,0.012666666666666666,0.011679420056383408,0.016,0.004027386226339106,0.5529961068599812,0.8577553836516272,0.6991417227160633,34,False,0.74,0.06,0.47333333333333333,0.25333333333333335,12.733333333333333,1.6915022150624244,1368.0,1720.0
6
+ scsemi__raw,C34_2104,covid_positive,1500,2808,150,0.7146666666666667,0.7916666666666666,0.08533333333333333,0.024216524216524215,0.06466666666666666,0.041666666666666664,0.09733333333333333,0.12428774928774929,0.034,0.013888888888888888,0.004,0.004273504273504274,0.20845584045584042,0.686759276791646,0.6734251236466217,5,False,0.52,0.03333333333333333,0.64,0.32,6.466666666666667,4.166666666666666,1369.0,2067.5
7
+ scsemi__raw,C34_2504,covid_positive,1500,1945,150,0.71,0.6961439588688946,0.098,0.024678663239074552,0.058666666666666666,0.12544987146529563,0.102,0.12904884318766066,0.027333333333333334,0.02416452442159383,0.004,0.0005141388174807198,0.18766409597257927,0.49571386119610195,0.6496165759513074,4,False,0.5266666666666666,0.02666666666666667,0.6266666666666667,0.29333333333333333,5.866666666666666,12.544987146529563,1368.0,2111.0
8
+ scsemi__raw,C63_1704,covid_positive,1500,3305,150,0.6833333333333333,0.7718608169440242,0.09866666666666667,0.11981845688350984,0.028,0.013010590015128594,0.17266666666666666,0.08199697428139183,0.016,0.006959152798789713,0.0013333333333333333,0.006354009077155824,0.22939989914271303,0.6372199609186698,0.6747912738731231,11,False,0.4,0.06666666666666667,0.5133333333333333,0.14666666666666667,2.8000000000000003,1.3010590015128594,1368.0,1364.0
9
+ scsemi__raw,C63_2404,covid_positive,1500,2143,150,0.42533333333333334,0.6971535230984601,0.07133333333333333,0.1675221651889874,0.244,0.0377974801679888,0.232,0.08726084927671489,0.024,0.007932804479701353,0.0033333333333333335,0.0023331777881474567,0.7360180432415617,0.5178326112278198,0.5927299148815142,12,False,0.22666666666666666,0.04,0.29333333333333333,0.36,24.4,3.7797480167988797,1367.5,1596.0
10
+ scsemi__raw,C63_2904,covid_positive,1500,1684,150,0.5606666666666666,0.6775534441805225,0.056666666666666664,0.14251781472684086,0.232,0.08491686460807601,0.12133333333333333,0.0855106888361045,0.028666666666666667,0.007719714964370546,0.0006666666666666666,0.0017814726840855108,0.4077054631828979,0.4486052153916665,0.6071260047826501,5,False,0.28,0.03333333333333333,0.3933333333333333,0.24,23.200000000000003,8.491686460807601,1367.0,1647.5
11
+ scsemi__raw,C65_1704,covid_positive,1500,1117,150,0.18533333333333332,0.5264100268576545,0.12266666666666666,0.13070725156669652,0.19933333333333333,0.03670546105640107,0.484,0.2909579230080573,0.006,0.009847806624888093,0.0026666666666666666,0.005371530886302597,0.7113398985377498,0.4288803070779367,0.7593508994501917,7,False,0.74,0.13333333333333333,0.42,0.18,19.933333333333334,3.670546105640107,1368.0,1042.0
12
+ scsemi__raw,C65_2104,covid_positive,1500,274,137,0.332,0.5766423357664233,0.12866666666666668,0.20802919708029197,0.20133333333333334,0.014598540145985401,0.33,0.19343065693430658,0.0026666666666666666,0.0036496350364963502,0.005333333333333333,0.0036496350364963502,0.6499756690997567,0.4463773019237143,0.6631552236775063,42,False,0.48905109489051096,0.058394160583941604,0.2116788321167883,0.17518248175182483,20.133333333333333,1.4598540145985401,1368.0,1266.0
13
+ scsemi__raw,C65_2504,covid_positive,1500,1069,150,0.7686666666666667,0.6623012160898035,0.09466666666666666,0.11412535079513564,0.022,0.031805425631431246,0.09933333333333333,0.16931711880261927,0.007333333333333333,0.002806361085126286,0.008,0.019644527595884004,0.2217848456501404,0.4663543815292166,0.5275708257466284,9,False,0.6533333333333333,0.02,0.6666666666666666,0.12666666666666668,2.1999999999999997,3.1805425631431246,1368.0,2137.0
14
+ scsemi__raw,C101_0601,covid_positive,1500,344,150,0.364,0.6482558139534884,0.014,0.03197674418604651,0.35933333333333334,0.14825581395348839,0.08933333333333333,0.09302325581395349,0.05333333333333334,0.0377906976744186,0.12,0.040697674418604654,0.6118449612403102,0.4223819094787449,0.617057169470448,21,False,0.5133333333333333,0.11333333333333333,0.3,0.04666666666666667,35.93333333333334,14.825581395348838,1369.0,1309.0
15
+ scsemi__raw,C101_1101,covid_positive,1500,566,150,0.3953333333333333,0.27385159010600707,0.005333333333333333,0.04770318021201413,0.3473333333333333,0.5106007067137809,0.102,0.06537102473498234,0.04066666666666666,0.07420494699646643,0.10933333333333334,0.028268551236749116,0.4783510011778562,0.8091617576825972,0.5808380259755097,2,False,0.36,0.14666666666666667,0.22666666666666666,0.07333333333333333,34.733333333333334,51.060070671378085,1367.0,1003.0
16
+ scsemi__raw,C101_1301,covid_positive,1500,2035,150,0.398,0.3154791154791155,0.102,0.05110565110565111,0.27266666666666667,0.4692874692874693,0.06,0.057985257985257985,0.042,0.05847665847665848,0.12533333333333332,0.047665847665847666,0.42619492219492217,0.7338732986485552,0.6052246677533192,1,True,0.7533333333333333,0.18,0.5866666666666667,0.14,27.266666666666666,46.928746928746925,1366.0,875.0
17
+ scsemi__raw,C101_1801,covid_positive,1500,1555,150,0.46266666666666667,0.3562700964630225,0.112,0.3762057877813505,0.23066666666666666,0.12861736334405144,0.024,0.03858520900321544,0.05466666666666667,0.028938906752411574,0.116,0.07138263665594856,0.5575819935691319,0.5672302170897875,0.5090147513325941,3,False,0.29333333333333333,0.17333333333333334,0.66,0.07333333333333333,23.066666666666666,12.861736334405144,1367.0,806.0
18
+ scsemi__raw,C101_2001,covid_positive,1500,2130,150,0.79,0.4765258215962441,0.132,0.2051643192488263,0.03333333333333333,0.22253521126760564,0.018,0.05539906103286385,0.024,0.022535211267605635,0.0026666666666666666,0.01784037558685446,0.6298779342723005,0.21537928076902224,0.5368797977347333,16,False,0.54,0.22666666666666666,0.6733333333333333,0.04666666666666667,3.3333333333333335,22.253521126760564,1366.0,882.0
19
+ scsemi__raw,C101_2502,recovery,1500,587,150,0.714,0.424190800681431,0.048,0.06132879045996593,0.024666666666666667,0.3679727427597956,0.02266666666666667,0.05792163543441227,0.03,0.07836456558773425,0.16066666666666668,0.010221465076660987,0.8805088018171494,0.49907994791508076,0.4660677374378999,26,False,0.4666666666666667,0.18666666666666668,0.78,0.08,2.466666666666667,36.79727427597956,1368.0,822.0
20
+ scsemi__raw,C108_2204,covid_negative,1500,1839,150,0.7106666666666667,0.6688417618270799,0.07066666666666667,0.0032626427406199023,0.126,0.03806416530723219,0.037333333333333336,0.25502990755845567,0.05266666666666667,0.021750951604132682,0.0026666666666666666,0.013050570962479609,0.4561609570418706,0.6507302761218745,0.5134795780901967,26,False,0.26,0.18666666666666668,0.4533333333333333,0.03333333333333333,12.6,3.8064165307232187,1368.0,1341.0
21
+ scsemi__raw,C108_1501,covid_positive,1500,1488,150,0.45666666666666667,0.2956989247311828,0.012666666666666666,0.016129032258064516,0.11866666666666667,0.21841397849462366,0.39266666666666666,0.41935483870967744,0.014,0.04032258064516129,0.005333333333333333,0.010080645161290322,0.32193548387096776,0.6655377748520411,0.5687635805594105,27,False,0.31333333333333335,0.2,0.12666666666666668,0.06666666666666667,11.866666666666667,21.841397849462364,1369.0,863.0
22
+ scsemi__raw,C108_1801,covid_positive,1500,806,150,0.5513333333333333,0.2853598014888337,0.236,0.07568238213399504,0.016666666666666666,0.08560794044665013,0.18266666666666667,0.47890818858560796,0.011333333333333334,0.04466501240694789,0.002,0.02977667493796526,0.852582299421009,0.7794044825679738,0.5355735600329711,43,False,0.5333333333333333,0.35333333333333333,0.3933333333333333,0.02,1.6666666666666667,8.560794044665013,1369.0,676.0
23
+ scsemi__raw,C108_2201,covid_positive,1500,696,150,0.724,0.2988505747126437,0.042,0.041666666666666664,0.004,0.09195402298850575,0.19333333333333333,0.5100574712643678,0.014666666666666666,0.021551724137931036,0.022,0.035919540229885055,0.8509655172413793,0.8221069485763561,0.7856391969096826,6,False,0.7,0.14666666666666667,0.5733333333333334,0.14666666666666667,0.4,9.195402298850574,1368.0,1399.5
24
+ scsemi__raw,C145_3004,covid_negative,1500,743,150,0.6726666666666666,0.6002691790040376,0.13133333333333333,0.05787348586810229,0.09666666666666666,0.033647375504710635,0.05,0.26648721399730824,0.046,0.018842530282637954,0.0033333333333333335,0.02288021534320323,0.47206819201435624,0.5048256820806906,0.65194359427924,21,False,0.6133333333333333,0.18666666666666668,0.4266666666666667,0.13333333333333333,9.666666666666666,3.3647375504710633,1370.0,894.0
25
+ scsemi__raw,C145_0701,covid_positive,1500,1110,150,0.6306666666666667,0.3036036036036036,0.06533333333333333,0.26306306306306304,0.17733333333333334,0.1963963963963964,0.10666666666666667,0.1972972972972973,0.02,0.03063063063063063,0.0,0.009009009009009009,0.6541261261261261,0.3732929539316338,0.5548565220002201,34,False,0.37333333333333335,0.17333333333333334,0.37333333333333335,0.02,17.733333333333334,19.63963963963964,1368.0,848.5
26
+ scsemi__raw,C145_1201,covid_positive,1500,347,150,0.7253333333333334,0.207492795389049,0.04133333333333333,0.5504322766570605,0.0026666666666666666,0.0345821325648415,0.194,0.14697406340057637,0.011333333333333334,0.02881844380403458,0.025333333333333333,0.03170028818443804,1.1297329490874162,0.8821210969031765,0.6086086343120596,40,False,0.5666666666666667,0.08,0.30666666666666664,0.06666666666666667,0.26666666666666666,3.45821325648415,1367.0,627.0
27
+ scsemi__raw,C145_1401,covid_positive,1500,1060,150,0.8246666666666667,0.2169811320754717,0.044,0.2650943396226415,0.008,0.22641509433962265,0.09866666666666667,0.24716981132075472,0.014,0.016037735849056604,0.010666666666666666,0.02830188679245283,1.2153710691823898,0.5655811062857183,0.4287341168991755,38,False,0.30666666666666664,0.08666666666666667,0.54,0.02666666666666667,0.8,22.641509433962266,1369.0,861.0
28
+ scsemi__raw,C145_1901,covid_positive,1500,1173,150,0.812,0.32821824381926684,0.13333333333333333,0.24296675191815856,0.021333333333333333,0.216538789428815,0.007333333333333333,0.16112531969309463,0.022,0.0247229326513214,0.004,0.026427962489343565,0.9675635123614664,0.3257364891935984,0.49490197625257504,22,False,0.5466666666666666,0.13333333333333333,0.7266666666666667,0.06666666666666667,2.1333333333333333,21.653878942881498,1369.0,1148.0
29
+ scsemi__raw,C145_2301,covid_positive,1500,958,150,0.774,0.5198329853862212,0.15066666666666667,0.1638830897703549,0.023333333333333334,0.10334029227557412,0.02666666666666667,0.1826722338204593,0.020666666666666667,0.009394572025052192,0.004666666666666667,0.020876826722338204,0.5308782185107864,0.22706217765817954,0.559612682153915,14,False,0.5466666666666666,0.12666666666666668,0.6466666666666666,0.05333333333333334,2.3333333333333335,10.334029227557412,1369.0,1421.0
30
+ scsemi__raw,C146_3004,covid_negative,1500,2608,150,0.6726666666666666,0.7346625766871165,0.12933333333333333,0.049079754601226995,0.096,0.125,0.04933333333333333,0.05253067484662577,0.05,0.03450920245398773,0.0026666666666666666,0.004217791411042945,0.1914887525562372,0.5975529548115712,0.6367944053734065,3,False,0.6133333333333333,0.32,0.47333333333333333,0.18,9.6,12.5,1369.0,845.5
31
+ scsemi__raw,C146_1201,covid_positive,1500,3205,150,0.662,0.5691107644305772,0.058,0.10452418096723869,0.164,0.2343213728549142,0.102,0.05585023400936037,0.014,0.027769110764430577,0.0,0.008424336973478939,0.2780780031201249,0.3316114816671099,0.579675768303016,28,False,0.4066666666666667,0.10666666666666667,0.3933333333333333,0.013333333333333334,16.400000000000002,23.432137285491418,1368.0,854.0
32
+ scsemi__raw,C146_1401,covid_positive,1500,1733,150,0.5486666666666666,0.6641661858049625,0.08066666666666666,0.09001731102135026,0.04133333333333333,0.14945181765724178,0.2866666666666667,0.06520484708597807,0.03133333333333333,0.029428736295441432,0.011333333333333334,0.0017311021350259665,0.4659372956337758,0.44778305845870914,0.6219238714690045,4,False,0.58,0.18666666666666668,0.12,0.11333333333333333,4.133333333333333,14.945181765724177,1366.0,758.0
33
+ scsemi__raw,C146_1601,covid_positive,1500,363,150,0.634,0.4573002754820937,0.06466666666666666,0.2975206611570248,0.17533333333333334,0.06336088154269973,0.10666666666666667,0.1322314049586777,0.019333333333333334,0.0440771349862259,0.0,0.005509641873278237,0.5773443526170798,0.34323997516733756,0.529670105438461,46,False,0.36666666666666664,0.18,0.35333333333333333,0.013333333333333334,17.533333333333335,6.336088154269973,1367.0,577.0
34
+ scsemi__raw,C146_1901,covid_positive,1500,2803,150,0.762,0.708169818052087,0.08266666666666667,0.13877987870139136,0.056,0.06814127720299679,0.088,0.06778451658936853,0.007333333333333333,0.00856225472707813,0.004,0.00856225472707813,0.14809133071708888,0.5357903229529583,0.5097334185934776,30,False,0.23333333333333334,0.13333333333333333,0.42,0.02,5.6000000000000005,6.814127720299679,1367.0,820.0
35
+ scsemi__raw,C146_2301,covid_positive,1500,1330,150,0.198,0.649624060150376,0.062,0.13458646616541353,0.192,0.0518796992481203,0.48,0.1443609022556391,0.030666666666666665,0.006015037593984963,0.037333333333333336,0.013533834586466165,1.048421052631579,0.4186988071495361,0.6097770557576881,19,False,0.28,0.07333333333333333,0.07333333333333333,0.05333333333333334,19.2,5.18796992481203,1368.0,953.5
36
+ scsemi__raw,C146_2701,covid_positive,1500,1109,150,0.394,0.4211000901713255,0.118,0.16050495942290352,0.27,0.3155996393146979,0.06333333333333334,0.06492335437330929,0.036,0.019837691614066726,0.11866666666666667,0.018034265103697024,0.2335894198978058,0.24763379852605116,0.6446077027165228,5,False,0.7333333333333333,0.06666666666666667,0.5266666666666666,0.09333333333333334,27.0,31.55996393146979,1368.0,1485.0
37
+ scsemi__raw,C146_2502,recovery,1500,5129,150,0.65,0.71475921232209,0.13333333333333333,0.04679274712419575,0.112,0.14837200233963735,0.06666666666666667,0.06336517839734841,0.036,0.01852212906999415,0.002,0.008188730746734256,0.2146398908169233,0.5489691114929643,0.7020931026051526,2,False,0.66,0.1,0.3466666666666667,0.26666666666666666,11.200000000000001,14.837200233963735,1369.5,1290.0
38
+ scsemi__raw,C161_1105,covid_negative,1500,820,150,0.6333333333333333,0.6743902439024391,0.118,0.06341463414634146,0.03666666666666667,0.20853658536585365,0.03133333333333333,0.00975609756097561,0.03,0.03902439024390244,0.15066666666666667,0.004878048780487805,0.4439024390243903,0.4793839879762078,0.7503676659907222,14,False,0.62,0.03333333333333333,0.72,0.08,3.6666666666666665,20.853658536585364,1367.0,1665.0
39
+ scsemi__raw,C190_2605,covid_negative,1500,1791,150,0.2753333333333333,0.04578447794528197,0.026,0.0893355667225014,0.23466666666666666,0.4712451144611949,0.396,0.3405918481295366,0.050666666666666665,0.0413176996091569,0.017333333333333333,0.011725293132328308,0.5998280290340592,1.1099157992609519,0.6138017641521413,1,True,0.6066666666666667,0.10666666666666667,0.18666666666666668,0.16,23.466666666666665,47.124511446119485,1366.0,1186.0
40
+ scsemi__raw,C190_2901,covid_positive,1500,1527,150,0.4513333333333333,0.0412573673870334,0.028,0.3798297314996726,0.45666666666666667,0.3700065487884741,0.05,0.16110019646365423,0.010666666666666666,0.04191224623444663,0.0033333333333333335,0.005893909626719057,0.9934721676489849,1.0460650034911254,0.5180862251773527,22,False,0.64,0.06666666666666667,0.5,0.02666666666666667,45.666666666666664,37.00065487884741,1366.5,1198.0
41
+ scsemi__raw,C190_0102,covid_positive,1500,4868,150,0.5266666666666666,0.03594905505341003,0.05333333333333334,0.3769515201314708,0.20333333333333334,0.33340180772391126,0.148,0.20336894001643385,0.06266666666666666,0.042317173377156944,0.006,0.00801150369761709,1.0221342098055328,1.0524464400165763,0.6393774995087373,3,False,0.5933333333333334,0.13333333333333333,0.42,0.12666666666666668,20.333333333333332,33.34018077239113,1367.0,1038.0
42
+ scsemi__raw,C190_0302,covid_positive,1500,2220,150,0.154,0.11576576576576576,0.37866666666666665,0.3342342342342342,0.258,0.3045045045045045,0.15466666666666667,0.20315315315315316,0.04466666666666667,0.03333333333333333,0.01,0.009009009009009009,0.18998198198198196,0.8908180079690808,0.6577596641920601,6,False,0.6866666666666666,0.15333333333333332,0.5333333333333333,0.14,25.8,30.45045045045045,1368.0,1175.5
43
+ scsemi__raw,C190_0502,covid_positive,1500,2030,150,0.15133333333333332,0.05172413793103448,0.36733333333333335,0.24778325123152709,0.25533333333333336,0.5167487684729064,0.178,0.10541871921182266,0.04,0.07389162561576355,0.008,0.004433497536945813,0.5906141215106733,1.0977396417184362,0.6963382818725812,6,False,0.78,0.3,0.5133333333333333,0.10666666666666667,25.533333333333335,51.67487684729064,1369.0,799.0
44
+ scsemi__raw,C190_0802,covid_positive,1500,1447,150,0.31133333333333335,0.038700760193503804,0.18133333333333335,0.2156185210780926,0.336,0.5929509329647547,0.076,0.0912232204561161,0.094,0.05459571527297857,0.0013333333333333333,0.006910850034554251,0.6240737157337017,1.1472226897096935,0.676194423267793,6,False,0.8066666666666666,0.19333333333333333,0.47333333333333333,0.11333333333333333,33.6,59.295093296475464,1365.0,854.0
45
+ scsemi__raw,C190_1002,covid_positive,1500,4052,150,0.30666666666666664,0.044669299111549855,0.18066666666666667,0.12043435340572557,0.33866666666666667,0.6414116485686081,0.082,0.12709772951628825,0.09133333333333334,0.06071076011846002,0.0006666666666666666,0.005676209279368213,0.7057045080618624,1.0883760857947231,0.7041735227384059,1,True,0.8333333333333334,0.22666666666666666,0.52,0.18,33.86666666666667,64.14116485686081,1368.0,994.0
46
+ scsemi__raw,C190_0903,recovery,1500,1371,150,0.384,0.0962800875273523,0.32266666666666666,0.24288840262582057,0.168,0.4062727935813275,0.06466666666666666,0.1560904449307075,0.042,0.07221006564551423,0.018666666666666668,0.0262582056892779,0.7349963530269875,0.9161307807727008,0.5874164653007147,1,True,0.64,0.4266666666666667,0.4066666666666667,0.2,16.8,40.62727935813275,1367.0,998.0
47
+ scsemi__raw,C197_2605,covid_negative,1500,2835,150,0.4766666666666667,0.6052910052910053,0.10533333333333333,0.13015873015873017,0.15333333333333332,0.1347442680776014,0.21933333333333332,0.08677248677248678,0.029333333333333333,0.01869488536155203,0.016,0.02433862433862434,0.32357671957671963,0.2959728605242846,0.7267041615568834,7,False,0.6866666666666666,0.07333333333333333,0.41333333333333333,0.36666666666666664,15.333333333333332,13.474426807760139,1370.0,1812.0
48
+ scsemi__raw,C212_2705,covid_negative,1500,1150,150,0.5993333333333334,0.5417391304347826,0.12,0.0817391304347826,0.08066666666666666,0.15478260869565216,0.146,0.18869565217391304,0.048666666666666664,0.026956521739130435,0.005333333333333333,0.00608695652173913,0.23513043478260873,0.23402402029448346,0.6066063636073978,1,True,0.3466666666666667,0.02666666666666667,0.4533333333333333,0.2866666666666667,8.066666666666666,15.478260869565217,1368.0,1861.5
paper-releases/pbisc-diffusion/updates/20261008T050202Z-scsemi-imperial-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/scsemi_cv_20261002/fold0/summary.json ADDED
@@ -0,0 +1,621 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema": "paired_ft_scores.v1",
3
+ "dataset": "imperial_eskd",
4
+ "written_utc": "2026-10-08T04:46:28.173682+00:00",
5
+ "command": [
6
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
7
+ "--dataset",
8
+ "imperial_eskd",
9
+ "--out",
10
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/scsemi_cv_20261002/fold0",
11
+ "--threads",
12
+ "8",
13
+ "--arm",
14
+ "scsemi__raw=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/imperial_eskd/fold0/scsemi__raw.npz",
15
+ "--case-groups",
16
+ "covid_positive",
17
+ "--control-groups",
18
+ "covid_negative"
19
+ ],
20
+ "arms": [
21
+ "scsemi__raw"
22
+ ],
23
+ "donors": [
24
+ "C21_1004",
25
+ "C21_1704",
26
+ "C21_2504",
27
+ "C34_1404",
28
+ "C34_2104",
29
+ "C34_2504",
30
+ "C63_1704",
31
+ "C63_2404",
32
+ "C63_2904",
33
+ "C65_1704",
34
+ "C65_2104",
35
+ "C65_2504",
36
+ "C101_0601",
37
+ "C101_1101",
38
+ "C101_1301",
39
+ "C101_1801",
40
+ "C101_2001",
41
+ "C101_2502",
42
+ "C108_2204",
43
+ "C108_1501",
44
+ "C108_1801",
45
+ "C108_2201",
46
+ "C145_3004",
47
+ "C145_0701",
48
+ "C145_1201",
49
+ "C145_1401",
50
+ "C145_1901",
51
+ "C145_2301",
52
+ "C146_3004",
53
+ "C146_1201",
54
+ "C146_1401",
55
+ "C146_1601",
56
+ "C146_1901",
57
+ "C146_2301",
58
+ "C146_2701",
59
+ "C146_2502",
60
+ "C161_1105",
61
+ "C190_2605",
62
+ "C190_2901",
63
+ "C190_0102",
64
+ "C190_0302",
65
+ "C190_0502",
66
+ "C190_0802",
67
+ "C190_1002",
68
+ "C190_0903",
69
+ "C197_2605",
70
+ "C212_2705"
71
+ ],
72
+ "n_donors": 47,
73
+ "reference": {
74
+ "cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/imperial_eskd",
75
+ "reference_sha256": "34b4caa3f8a60b46d5faf58f09cdaa5622bcce19e4c45d9902a711fead96375e",
76
+ "features_sha256": "e46e5bb1a24eae045efe75125d20e3accaa8f68a1006eb2f60d24159013d4aa7",
77
+ "n_r1_cells": 7037,
78
+ "pca": {
79
+ "n_components": 50,
80
+ "explained_variance_ratio_sum": 0.26531678438186646,
81
+ "n_fit_cells": 7037
82
+ },
83
+ "r2_control": {
84
+ "precision": 0.9913315333238596,
85
+ "coverage": 1.0,
86
+ "density": 1.8163279806735826,
87
+ "n_query": 7037,
88
+ "depth_matched": {
89
+ "precision": 0.9907631092795225,
90
+ "coverage": 1.0,
91
+ "density": 1.8123063805598978
92
+ }
93
+ },
94
+ "observed_l1_loo_null_mean": 0.618597117217712
95
+ },
96
+ "contrast_definition": {
97
+ "enabled": true,
98
+ "rule": "explicit --case-groups / --control-groups",
99
+ "group_source": "features groups",
100
+ "case_groups": [
101
+ "covid_positive"
102
+ ],
103
+ "control_groups": [
104
+ "covid_negative"
105
+ ],
106
+ "n_case_donors": 37,
107
+ "n_control_donors": 7,
108
+ "n_donors_in_neither": 3,
109
+ "case": [
110
+ true,
111
+ true,
112
+ true,
113
+ true,
114
+ true,
115
+ true,
116
+ true,
117
+ true,
118
+ true,
119
+ true,
120
+ true,
121
+ true,
122
+ true,
123
+ true,
124
+ true,
125
+ true,
126
+ true,
127
+ false,
128
+ false,
129
+ true,
130
+ true,
131
+ true,
132
+ false,
133
+ true,
134
+ true,
135
+ true,
136
+ true,
137
+ true,
138
+ false,
139
+ true,
140
+ true,
141
+ true,
142
+ true,
143
+ true,
144
+ true,
145
+ false,
146
+ false,
147
+ false,
148
+ true,
149
+ true,
150
+ true,
151
+ true,
152
+ true,
153
+ true,
154
+ false,
155
+ false,
156
+ false
157
+ ],
158
+ "ctrl": [
159
+ false,
160
+ false,
161
+ false,
162
+ false,
163
+ false,
164
+ false,
165
+ false,
166
+ false,
167
+ false,
168
+ false,
169
+ false,
170
+ false,
171
+ false,
172
+ false,
173
+ false,
174
+ false,
175
+ false,
176
+ false,
177
+ true,
178
+ false,
179
+ false,
180
+ false,
181
+ true,
182
+ false,
183
+ false,
184
+ false,
185
+ false,
186
+ false,
187
+ true,
188
+ false,
189
+ false,
190
+ false,
191
+ false,
192
+ false,
193
+ false,
194
+ false,
195
+ true,
196
+ true,
197
+ false,
198
+ false,
199
+ false,
200
+ false,
201
+ false,
202
+ false,
203
+ false,
204
+ true,
205
+ true
206
+ ],
207
+ "groups": [
208
+ "covid_positive",
209
+ "covid_positive",
210
+ "covid_positive",
211
+ "covid_positive",
212
+ "covid_positive",
213
+ "covid_positive",
214
+ "covid_positive",
215
+ "covid_positive",
216
+ "covid_positive",
217
+ "covid_positive",
218
+ "covid_positive",
219
+ "covid_positive",
220
+ "covid_positive",
221
+ "covid_positive",
222
+ "covid_positive",
223
+ "covid_positive",
224
+ "covid_positive",
225
+ "recovery",
226
+ "covid_negative",
227
+ "covid_positive",
228
+ "covid_positive",
229
+ "covid_positive",
230
+ "covid_negative",
231
+ "covid_positive",
232
+ "covid_positive",
233
+ "covid_positive",
234
+ "covid_positive",
235
+ "covid_positive",
236
+ "covid_negative",
237
+ "covid_positive",
238
+ "covid_positive",
239
+ "covid_positive",
240
+ "covid_positive",
241
+ "covid_positive",
242
+ "covid_positive",
243
+ "recovery",
244
+ "covid_negative",
245
+ "covid_negative",
246
+ "covid_positive",
247
+ "covid_positive",
248
+ "covid_positive",
249
+ "covid_positive",
250
+ "covid_positive",
251
+ "covid_positive",
252
+ "recovery",
253
+ "covid_negative",
254
+ "covid_negative"
255
+ ]
256
+ },
257
+ "deg_definition": {
258
+ "enabled": true,
259
+ "score": "top-50 DEG overlap per cell type (benchmark total_top50_overlap, Welch backend)",
260
+ "source": "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py",
261
+ "functions": [
262
+ "welch_bh_deg",
263
+ "top_deg_genes",
264
+ "jaccard"
265
+ ],
266
+ "reproduces": "utility_studies_final6k_20260925/sle top-50 DEG 81 (1,006 genes) / 84 (2,279 genes) = sum over the six gated types of top50_overlap_count",
267
+ "top_n": 50,
268
+ "fdr": 0.05,
269
+ "n_genes": 5927,
270
+ "types": [
271
+ "T cell",
272
+ "B cell",
273
+ "Monocyte",
274
+ "NK cell",
275
+ "DC"
276
+ ],
277
+ "aggregates_source": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/imperial_eskd/deg_reference.npz",
278
+ "aggregates_sha256": "8fada1ace7530b79bfc5c5201b9cb60399ff77d083dd8b53b13cfbe900cda55c",
279
+ "aggregates_note": null,
280
+ "types_not_scored_observed": [],
281
+ "observed": {
282
+ "T cell": {
283
+ "n_significant": 0,
284
+ "n_tested": 5571,
285
+ "n_case_donors": 37,
286
+ "n_control_donors": 7,
287
+ "n_cells": 43376,
288
+ "top_list_size": 0
289
+ },
290
+ "B cell": {
291
+ "n_significant": 58,
292
+ "n_tested": 5418,
293
+ "n_case_donors": 37,
294
+ "n_control_donors": 7,
295
+ "n_cells": 12740,
296
+ "top_list_size": 50
297
+ },
298
+ "Monocyte": {
299
+ "n_significant": 89,
300
+ "n_tested": 5291,
301
+ "n_case_donors": 36,
302
+ "n_control_donors": 7,
303
+ "n_cells": 15344,
304
+ "top_list_size": 50
305
+ },
306
+ "NK cell": {
307
+ "n_significant": 26,
308
+ "n_tested": 5202,
309
+ "n_case_donors": 37,
310
+ "n_control_donors": 7,
311
+ "n_cells": 10153,
312
+ "top_list_size": 26
313
+ },
314
+ "DC": {
315
+ "n_significant": 33,
316
+ "n_tested": 4914,
317
+ "n_case_donors": 37,
318
+ "n_control_donors": 7,
319
+ "n_cells": 2139,
320
+ "top_list_size": 33
321
+ }
322
+ },
323
+ "broadcast": "welch_bh_deg + top_deg_genes on the arm's condition bulk_counts (scoring genes, case|control donors), one list compared with every type's observed list (sle_broadcast.py broadcast_input_bulk); not part of the published benchmark"
324
+ },
325
+ "headline": {
326
+ "scsemi__raw": {
327
+ "comp_l1": 0.5568040172281256,
328
+ "comp_l1_obs_loo_null": 0.618597117217712,
329
+ "precision": 0.5323291175216711,
330
+ "coverage": 0.13116384823078017,
331
+ "precision_dm": 0.47122353275543555,
332
+ "coverage_dm": 0.13087963620861162,
333
+ "pb_r_median": 0.6071260047826501,
334
+ "pb_top1": 0.1276595744680851,
335
+ "mono_pct_gen": 14.548936170212768,
336
+ "mono_pct_obs": 18.835839458164088,
337
+ "median_umi_gen": 1368.0,
338
+ "median_umi_obs": 1246.0,
339
+ "contrast_mean_cp10k_r_gen": 0.49311016054373724,
340
+ "contrast_pseudobulk_log1p_cpm_r_gen": 0.22494720990425554,
341
+ "contrast_mean_cp10k_r_broadcast": 0.5300494713536089,
342
+ "contrast_pseudobulk_log1p_cpm_r_broadcast": 0.40947319214102107,
343
+ "deg_top50_T": 0,
344
+ "deg_top50_B": 0,
345
+ "deg_top50_Mono": 0,
346
+ "deg_top50_NK": 0,
347
+ "deg_top50_DC": 1,
348
+ "deg_top50_sum": 1,
349
+ "deg_top50_max": 159,
350
+ "deg_top50_sum_4type": 0,
351
+ "deg_top50_sum_broadcast": 7,
352
+ "seconds": 10.7
353
+ }
354
+ },
355
+ "per_arm": {
356
+ "scsemi__raw": {
357
+ "arm": "scsemi__raw",
358
+ "npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/generated/imperial_eskd/fold0/scsemi__raw.npz",
359
+ "npz_sha256": "5eeeeaa3453ceaac95f00bdfd8d3130fd81dd2b5ebc455de49c8620b073e612a",
360
+ "receipt_verified": true,
361
+ "generation": {
362
+ "checkpoint": null,
363
+ "checkpoint_sha256": null,
364
+ "input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/imperial_eskd/fold0/test_raw.npz",
365
+ "input_condition_sha256": "131ad25e4bff3dfc3e542b9a69bd0c3a4ab9979a14f159788d6df9b024271805",
366
+ "seed": 20260927,
367
+ "steps": null,
368
+ "support_readout": "upstream (values <= 10 normalized units zeroed by fast_semi)",
369
+ "weights": null
370
+ },
371
+ "condition_for_broadcast": {
372
+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/imperial_eskd/fold0/test_raw.npz",
373
+ "sha256": "131ad25e4bff3dfc3e542b9a69bd0c3a4ab9979a14f159788d6df9b024271805"
374
+ },
375
+ "poisson": {
376
+ "seed": 20260916,
377
+ "rule": "whole NPZ, rows in NPZ order",
378
+ "nnz_whole_npz": 8947224,
379
+ "median_library_whole_npz_panel": 1368.0,
380
+ "n_rows_whole_npz": 70500
381
+ },
382
+ "annotation": {
383
+ "model_pt_sha256": "bf3655899e5abee435340fc008656c4a17342da0f30b70cfd43de8e9223e1930",
384
+ "zero_padded_model_genes": 0,
385
+ "label_counts": {
386
+ "T cell": 39296,
387
+ "Monocyte": 10257,
388
+ "NK cell": 9185,
389
+ "B cell": 7343,
390
+ "Other": 2317,
391
+ "DC": 2102
392
+ },
393
+ "mean_l2_max_prob": 0.9195732850802283,
394
+ "predict_seconds": 3.5
395
+ },
396
+ "n_donors": 47,
397
+ "n_generated_cells": 70500,
398
+ "composition": {
399
+ "l1_mean": 0.5568040172281256,
400
+ "l1_median": 0.5529961068599812,
401
+ "l1_obs_loo_null_mean": 0.618597117217712,
402
+ "l1_generated_loo_mean_vs_observed_mean": 0.5832284749276077,
403
+ "composition_top1": 0.0851063829787234,
404
+ "mean_fraction_generated": {
405
+ "T cell": 0.55739,
406
+ "B cell": 0.104156,
407
+ "Monocyte": 0.145489,
408
+ "NK cell": 0.130284,
409
+ "DC": 0.029816,
410
+ "Other": 0.032865
411
+ },
412
+ "mean_fraction_observed": {
413
+ "T cell": 0.469992,
414
+ "B cell": 0.15192,
415
+ "Monocyte": 0.188358,
416
+ "NK cell": 0.145921,
417
+ "DC": 0.029009,
418
+ "Other": 0.0148
419
+ }
420
+ },
421
+ "pseudobulk": {
422
+ "n_genes": 5927,
423
+ "r_median": 0.6071260047826501,
424
+ "r_mean": 0.6034887638150603,
425
+ "top1": 0.1276595744680851,
426
+ "n_top1": 6,
427
+ "own_rank_median": 9.0,
428
+ "chance_top1": 0.02127659574468085
429
+ },
430
+ "precision_coverage": {
431
+ "precision": 0.5323291175216711,
432
+ "coverage": 0.13116384823078017,
433
+ "density": 0.12108853204490551,
434
+ "n_query": 7037,
435
+ "n_reference": 7037
436
+ },
437
+ "precision_coverage_depth_matched": {
438
+ "precision": 0.47122353275543555,
439
+ "coverage": 0.13087963620861162,
440
+ "density": 0.13164700866846668,
441
+ "detected_median_before": {
442
+ "R1": 343.0,
443
+ "Q": 125.0
444
+ },
445
+ "detected_median_after": {
446
+ "R1": 125.0,
447
+ "Q": 125.0
448
+ }
449
+ },
450
+ "monocyte_pct": {
451
+ "generated_mean_over_donors": 14.548936170212768,
452
+ "observed_mean_over_donors": 18.835839458164088,
453
+ "generated_pooled_cells": 14.548936170212768
454
+ },
455
+ "median_umi_per_cell_scoring_genes": {
456
+ "generated_pooled": 1368.0,
457
+ "observed_pooled": 1246.0,
458
+ "generated_mean_of_donor_medians": 1367.75537109375,
459
+ "observed_mean_of_donor_medians": 1239.9574468085107
460
+ },
461
+ "contrast": {
462
+ "mean_cp10k": {
463
+ "per_type": {
464
+ "T cell": {
465
+ "r_generated": 0.588707229448179,
466
+ "r_broadcast": 0.5453624372893018,
467
+ "partial_r_generated_given_broadcast": 0.44598142164322135,
468
+ "r_generated_vs_broadcast": 0.4770471672289242,
469
+ "n_genes": 3063
470
+ },
471
+ "B cell": {
472
+ "r_generated": 0.2982556585812344,
473
+ "r_broadcast": 0.3753258490057728,
474
+ "partial_r_generated_given_broadcast": 0.16107339868782833,
475
+ "r_generated_vs_broadcast": 0.43683700274204557,
476
+ "n_genes": 3238
477
+ },
478
+ "Monocyte": {
479
+ "r_generated": 0.6120384529066569,
480
+ "r_broadcast": 0.6803567857715679,
481
+ "partial_r_generated_given_broadcast": 0.4184054974719465,
482
+ "r_generated_vs_broadcast": 0.512593487575442,
483
+ "n_genes": 2821
484
+ },
485
+ "NK cell": {
486
+ "r_generated": 0.4734393012388788,
487
+ "r_broadcast": 0.5191528133477931,
488
+ "partial_r_generated_given_broadcast": 0.3263465236017029,
489
+ "r_generated_vs_broadcast": 0.42582654102460116,
490
+ "n_genes": 3042
491
+ }
492
+ },
493
+ "mean_r_generated": 0.49311016054373724,
494
+ "mean_r_broadcast": 0.5300494713536089,
495
+ "mean_partial_r": 0.33795171035117477
496
+ },
497
+ "pseudobulk_log1p_cpm": {
498
+ "per_type": {
499
+ "T cell": {
500
+ "r_generated": 0.31601729362608816,
501
+ "r_broadcast": 0.4537812836732842,
502
+ "partial_r_generated_given_broadcast": 0.14433306365829732,
503
+ "r_generated_vs_broadcast": 0.442190853697175,
504
+ "n_genes": 3063
505
+ },
506
+ "B cell": {
507
+ "r_generated": 0.1395172101996321,
508
+ "r_broadcast": 0.2602705853790834,
509
+ "partial_r_generated_given_broadcast": 0.07017144060142008,
510
+ "r_generated_vs_broadcast": 0.2866535221105436,
511
+ "n_genes": 3238
512
+ },
513
+ "Monocyte": {
514
+ "r_generated": 0.2618220859350989,
515
+ "r_broadcast": 0.565945711695303,
516
+ "partial_r_generated_given_broadcast": 0.05772121059544606,
517
+ "r_generated_vs_broadcast": 0.38502453694606614,
518
+ "n_genes": 2821
519
+ },
520
+ "NK cell": {
521
+ "r_generated": 0.182432249856203,
522
+ "r_broadcast": 0.3578951878164137,
523
+ "partial_r_generated_given_broadcast": 0.07522922639005733,
524
+ "r_generated_vs_broadcast": 0.3240518744032764,
525
+ "n_genes": 3042
526
+ }
527
+ },
528
+ "mean_r_generated": 0.22494720990425554,
529
+ "mean_r_broadcast": 0.40947319214102107,
530
+ "mean_partial_r": 0.0868637353113052
531
+ }
532
+ },
533
+ "deg_top50": {
534
+ "types_scored": [
535
+ "T cell",
536
+ "B cell",
537
+ "Monocyte",
538
+ "NK cell",
539
+ "DC"
540
+ ],
541
+ "types_not_scored": {},
542
+ "per_type": {
543
+ "T cell": {
544
+ "deg_scored": true,
545
+ "top50_overlap": 0,
546
+ "top50_jaccard": 0.0,
547
+ "obs_top_list_size": 0,
548
+ "gen_top_list_size": 7,
549
+ "top50_overlap_broadcast": 0,
550
+ "top50_jaccard_broadcast": 0.0,
551
+ "n_cells_obs": 43376,
552
+ "n_cells_gen": 36674
553
+ },
554
+ "B cell": {
555
+ "deg_scored": true,
556
+ "top50_overlap": 0,
557
+ "top50_jaccard": 0.0,
558
+ "obs_top_list_size": 50,
559
+ "gen_top_list_size": 11,
560
+ "top50_overlap_broadcast": 0,
561
+ "top50_jaccard_broadcast": 0.0,
562
+ "n_cells_obs": 12740,
563
+ "n_cells_gen": 6587
564
+ },
565
+ "Monocyte": {
566
+ "deg_scored": true,
567
+ "top50_overlap": 0,
568
+ "top50_jaccard": 0.0,
569
+ "obs_top_list_size": 50,
570
+ "gen_top_list_size": 19,
571
+ "top50_overlap_broadcast": 2,
572
+ "top50_jaccard_broadcast": 0.02040816326530612,
573
+ "n_cells_obs": 15344,
574
+ "n_cells_gen": 9800
575
+ },
576
+ "NK cell": {
577
+ "deg_scored": true,
578
+ "top50_overlap": 0,
579
+ "top50_jaccard": 0.0,
580
+ "obs_top_list_size": 26,
581
+ "gen_top_list_size": 10,
582
+ "top50_overlap_broadcast": 2,
583
+ "top50_jaccard_broadcast": 0.02702702702702703,
584
+ "n_cells_obs": 10153,
585
+ "n_cells_gen": 8954
586
+ },
587
+ "DC": {
588
+ "deg_scored": true,
589
+ "top50_overlap": 1,
590
+ "top50_jaccard": 0.022222222222222223,
591
+ "obs_top_list_size": 33,
592
+ "gen_top_list_size": 13,
593
+ "top50_overlap_broadcast": 3,
594
+ "top50_jaccard_broadcast": 0.0375,
595
+ "n_cells_obs": 2139,
596
+ "n_cells_gen": 1940
597
+ }
598
+ },
599
+ "sum": 1,
600
+ "sum_4type": 0,
601
+ "max": 159,
602
+ "mean": 0.2,
603
+ "sum_broadcast": 7,
604
+ "sum_broadcast_4type": 4,
605
+ "broadcast_n_significant": 234,
606
+ "seconds": 0.07
607
+ },
608
+ "seconds": 10.7
609
+ }
610
+ },
611
+ "code_sha256": {
612
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
613
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/ft_common.py": "4a6366b0f22208cd58714fc0261b8840c643b9d4569704d560cfd93534cbc747",
614
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/umap/cell_immicro_5arm/tools/stage_b_embed.py": "d056cfdf38fb0e5f478756f370174e993b75d0c973c48e02e21749175a4ca2da",
615
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/bulk2sc-paper/scripts/evaluate_generated_vs_truth.py": "48b12d794782b840838853e93e0fc55fab00532c4b3698f4588e926b985d2881",
616
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/utility_studies_final6k_20260925/immicro/tools/immicro_common.py": "c5c30e917148cc5e664e91ea30c11bbdff9b6d1f53a3e0a13e16b1917eff37e9",
617
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/predict_scanvi.py": "482ee5dcf4d72b54bc36cbb6dcff62e5030bc7afc46cb5fb01eca73a82ee45a5",
618
+ "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/aifi_scanvi_rebuild_20260916/poisson_readout.py": "8bfa080942fbcdc89ae23b276524a1a83266fb8cbc56b9af279e50f82e6cde38"
619
+ },
620
+ "seconds": 13.2
621
+ }
paper-releases/pbisc-diffusion/updates/20261008T050202Z-scsemi-imperial-deck/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores/imperial_eskd/scsemi_cv_20261002/fold1/arms/scsemi__raw/deg_top50_lists.csv ADDED
@@ -0,0 +1,396 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ celltype,source,rank,gene_id
2
+ T cell,observed,1,ENSG00000165949
3
+ T cell,observed,2,ENSG00000137959
4
+ T cell,observed,3,ENSG00000185745
5
+ T cell,observed,4,ENSG00000114737
6
+ T cell,observed,5,ENSG00000134321
7
+ T cell,observed,6,ENSG00000119917
8
+ T cell,observed,7,ENSG00000089127
9
+ T cell,observed,8,ENSG00000134326
10
+ T cell,observed,9,ENSG00000132530
11
+ T cell,observed,10,ENSG00000184979
12
+ T cell,observed,11,ENSG00000111331
13
+ T cell,observed,12,ENSG00000157601
14
+ T cell,observed,13,ENSG00000133106
15
+ T cell,observed,14,ENSG00000111335
16
+ T cell,observed,15,ENSG00000126709
17
+ T cell,observed,16,ENSG00000185507
18
+ T cell,observed,17,ENSG00000137965
19
+ T cell,observed,18,ENSG00000188313
20
+ T cell,observed,19,ENSG00000177409
21
+ T cell,observed,20,ENSG00000138642
22
+ T cell,observed,21,ENSG00000137628
23
+ T cell,observed,22,ENSG00000187608
24
+ T cell,observed,23,ENSG00000130589
25
+ T cell,observed,24,ENSG00000178184
26
+ T cell,observed,25,ENSG00000138496
27
+ T cell,observed,26,ENSG00000115155
28
+ T cell,observed,27,ENSG00000068079
29
+ T cell,observed,28,ENSG00000025708
30
+ T cell,observed,29,ENSG00000138646
31
+ T cell,observed,30,ENSG00000121060
32
+ T cell,observed,31,ENSG00000121858
33
+ T cell,observed,32,ENSG00000183486
34
+ T cell,observed,33,ENSG00000055332
35
+ T cell,observed,34,ENSG00000166750
36
+ T cell,observed,35,ENSG00000135077
37
+ T cell,observed,36,ENSG00000102524
38
+ T cell,observed,37,ENSG00000205413
39
+ T cell,observed,38,ENSG00000115267
40
+ T cell,observed,39,ENSG00000163565
41
+ T cell,observed,40,ENSG00000137193
42
+ T cell,observed,41,ENSG00000196684
43
+ T cell,observed,42,ENSG00000082516
44
+ T cell,observed,43,ENSG00000157483
45
+ T cell,observed,44,ENSG00000170581
46
+ T cell,observed,45,ENSG00000116138
47
+ T cell,observed,46,ENSG00000146859
48
+ T cell,observed,47,ENSG00000132256
49
+ T cell,observed,48,ENSG00000155363
50
+ T cell,observed,49,ENSG00000104812
51
+ T cell,observed,50,ENSG00000163644
52
+ T cell,generated,1,ENSG00000168329
53
+ T cell,generated,2,ENSG00000137193
54
+ T cell,generated,3,ENSG00000157601
55
+ T cell,generated,4,ENSG00000132530
56
+ T cell,generated,5,ENSG00000126709
57
+ T cell,generated,6,ENSG00000055332
58
+ T cell,generated,7,ENSG00000153250
59
+ T cell,generated,8,ENSG00000089692
60
+ T cell,generated,9,ENSG00000071051
61
+ T cell,generated,10,ENSG00000133106
62
+ T cell,generated,11,ENSG00000072736
63
+ T cell,generated,12,ENSG00000165949
64
+ T cell,generated,13,ENSG00000102096
65
+ T cell,generated,14,ENSG00000198604
66
+ T cell,generated,15,ENSG00000139193
67
+ T cell,generated,16,ENSG00000122122
68
+ T cell,generated,17,ENSG00000163947
69
+ T cell,generated,18,ENSG00000165929
70
+ T cell,generated,19,ENSG00000109452
71
+ T cell,generated,20,ENSG00000137275
72
+ T cell,generated,21,ENSG00000122643
73
+ T cell,generated,22,ENSG00000140853
74
+ T cell,generated,23,ENSG00000088986
75
+ T cell,generated,24,ENSG00000154822
76
+ T cell,generated,25,ENSG00000196684
77
+ T cell,generated,26,ENSG00000138698
78
+ T cell,generated,27,ENSG00000151651
79
+ T cell,generated,28,ENSG00000049618
80
+ T cell,generated,29,ENSG00000163508
81
+ T cell,generated,30,ENSG00000115904
82
+ T cell,generated,31,ENSG00000185885
83
+ T cell,generated,32,ENSG00000109475
84
+ B cell,observed,1,ENSG00000157601
85
+ B cell,observed,2,ENSG00000138496
86
+ B cell,observed,3,ENSG00000185885
87
+ B cell,observed,4,ENSG00000115267
88
+ B cell,observed,5,ENSG00000163644
89
+ B cell,observed,6,ENSG00000125637
90
+ B cell,generated,1,ENSG00000185507
91
+ B cell,generated,2,ENSG00000157601
92
+ B cell,generated,3,ENSG00000102096
93
+ B cell,generated,4,ENSG00000187608
94
+ B cell,generated,5,ENSG00000084207
95
+ B cell,generated,6,ENSG00000137959
96
+ B cell,generated,7,ENSG00000196684
97
+ B cell,generated,8,ENSG00000142089
98
+ B cell,generated,9,ENSG00000173193
99
+ B cell,generated,10,ENSG00000028277
100
+ B cell,generated,11,ENSG00000163513
101
+ B cell,generated,12,ENSG00000132530
102
+ B cell,generated,13,ENSG00000163534
103
+ B cell,generated,14,ENSG00000114127
104
+ B cell,generated,15,ENSG00000177455
105
+ B cell,generated,16,ENSG00000095015
106
+ B cell,generated,17,ENSG00000196628
107
+ B cell,generated,18,ENSG00000137478
108
+ B cell,generated,19,ENSG00000168421
109
+ B cell,generated,20,ENSG00000113580
110
+ B cell,generated,21,ENSG00000079950
111
+ B cell,generated,22,ENSG00000177409
112
+ B cell,generated,23,ENSG00000055332
113
+ B cell,generated,24,ENSG00000120899
114
+ B cell,generated,25,ENSG00000143546
115
+ B cell,generated,26,ENSG00000197943
116
+ B cell,generated,27,ENSG00000150907
117
+ B cell,generated,28,ENSG00000181722
118
+ B cell,generated,29,ENSG00000089127
119
+ B cell,generated,30,ENSG00000155657
120
+ B cell,generated,31,ENSG00000142192
121
+ B cell,generated,32,ENSG00000164327
122
+ B cell,generated,33,ENSG00000117632
123
+ B cell,generated,34,ENSG00000106948
124
+ B cell,generated,35,ENSG00000111371
125
+ B cell,generated,36,ENSG00000124256
126
+ B cell,generated,37,ENSG00000075568
127
+ B cell,generated,38,ENSG00000033800
128
+ B cell,generated,39,ENSG00000111716
129
+ B cell,generated,40,ENSG00000124151
130
+ B cell,generated,41,ENSG00000088986
131
+ B cell,generated,42,ENSG00000145088
132
+ B cell,generated,43,ENSG00000166428
133
+ B cell,generated,44,ENSG00000096968
134
+ B cell,generated,45,ENSG00000205268
135
+ B cell,generated,46,ENSG00000123066
136
+ B cell,generated,47,ENSG00000030582
137
+ B cell,generated,48,ENSG00000095585
138
+ B cell,generated,49,ENSG00000042980
139
+ B cell,generated,50,ENSG00000138698
140
+ Monocyte,observed,1,ENSG00000165949
141
+ Monocyte,observed,2,ENSG00000115155
142
+ Monocyte,observed,3,ENSG00000185745
143
+ Monocyte,observed,4,ENSG00000120885
144
+ Monocyte,observed,5,ENSG00000088827
145
+ Monocyte,observed,6,ENSG00000137959
146
+ Monocyte,observed,7,ENSG00000169385
147
+ Monocyte,observed,8,ENSG00000134321
148
+ Monocyte,observed,9,ENSG00000119917
149
+ Monocyte,observed,10,ENSG00000166428
150
+ Monocyte,observed,11,ENSG00000184979
151
+ Monocyte,observed,12,ENSG00000135636
152
+ Monocyte,observed,13,ENSG00000126709
153
+ Monocyte,observed,14,ENSG00000188042
154
+ Monocyte,observed,15,ENSG00000149131
155
+ Monocyte,observed,16,ENSG00000157601
156
+ Monocyte,observed,17,ENSG00000162614
157
+ Monocyte,observed,18,ENSG00000133216
158
+ Monocyte,observed,19,ENSG00000102760
159
+ Monocyte,observed,20,ENSG00000148773
160
+ Monocyte,observed,21,ENSG00000125538
161
+ Monocyte,observed,22,ENSG00000197980
162
+ Monocyte,observed,23,ENSG00000073756
163
+ Monocyte,observed,24,ENSG00000196735
164
+ Monocyte,observed,25,ENSG00000134326
165
+ Monocyte,observed,26,ENSG00000137965
166
+ Monocyte,observed,27,ENSG00000010030
167
+ Monocyte,observed,28,ENSG00000185885
168
+ Monocyte,observed,29,ENSG00000169439
169
+ Monocyte,observed,30,ENSG00000140563
170
+ Monocyte,observed,31,ENSG00000187608
171
+ Monocyte,observed,32,ENSG00000177409
172
+ Monocyte,observed,33,ENSG00000165185
173
+ Monocyte,observed,34,ENSG00000123405
174
+ Monocyte,observed,35,ENSG00000160223
175
+ Monocyte,observed,36,ENSG00000133106
176
+ Monocyte,observed,37,ENSG00000132530
177
+ Monocyte,observed,38,ENSG00000137198
178
+ Monocyte,observed,39,ENSG00000118922
179
+ Monocyte,observed,40,ENSG00000111335
180
+ Monocyte,observed,41,ENSG00000138642
181
+ Monocyte,observed,42,ENSG00000078053
182
+ Monocyte,observed,43,ENSG00000035720
183
+ Monocyte,observed,44,ENSG00000111331
184
+ Monocyte,observed,45,ENSG00000138646
185
+ Monocyte,observed,46,ENSG00000135114
186
+ Monocyte,observed,47,ENSG00000161835
187
+ Monocyte,observed,48,ENSG00000157168
188
+ Monocyte,observed,49,ENSG00000213782
189
+ Monocyte,observed,50,ENSG00000115267
190
+ Monocyte,generated,1,ENSG00000165949
191
+ Monocyte,generated,2,ENSG00000145287
192
+ Monocyte,generated,3,ENSG00000157601
193
+ Monocyte,generated,4,ENSG00000089127
194
+ Monocyte,generated,5,ENSG00000163565
195
+ Monocyte,generated,6,ENSG00000132530
196
+ Monocyte,generated,7,ENSG00000156273
197
+ Monocyte,generated,8,ENSG00000213741
198
+ Monocyte,generated,9,ENSG00000114942
199
+ Monocyte,generated,10,ENSG00000099331
200
+ Monocyte,generated,11,ENSG00000189060
201
+ Monocyte,generated,12,ENSG00000184730
202
+ Monocyte,generated,13,ENSG00000185885
203
+ Monocyte,generated,14,ENSG00000100596
204
+ Monocyte,generated,15,ENSG00000059728
205
+ Monocyte,generated,16,ENSG00000198382
206
+ Monocyte,generated,17,ENSG00000138688
207
+ Monocyte,generated,18,ENSG00000127184
208
+ Monocyte,generated,19,ENSG00000025708
209
+ Monocyte,generated,20,ENSG00000212907
210
+ Monocyte,generated,21,ENSG00000177954
211
+ Monocyte,generated,22,ENSG00000171858
212
+ Monocyte,generated,23,ENSG00000109475
213
+ Monocyte,generated,24,ENSG00000145592
214
+ Monocyte,generated,25,ENSG00000233927
215
+ Monocyte,generated,26,ENSG00000198918
216
+ Monocyte,generated,27,ENSG00000186468
217
+ Monocyte,generated,28,ENSG00000196531
218
+ Monocyte,generated,29,ENSG00000182899
219
+ Monocyte,generated,30,ENSG00000134419
220
+ Monocyte,generated,31,ENSG00000138326
221
+ Monocyte,generated,32,ENSG00000198938
222
+ Monocyte,generated,33,ENSG00000100097
223
+ Monocyte,generated,34,ENSG00000156482
224
+ Monocyte,generated,35,ENSG00000197958
225
+ Monocyte,generated,36,ENSG00000188846
226
+ Monocyte,generated,37,ENSG00000136942
227
+ NK cell,observed,1,ENSG00000137959
228
+ NK cell,observed,2,ENSG00000089127
229
+ NK cell,observed,3,ENSG00000134321
230
+ NK cell,observed,4,ENSG00000134326
231
+ NK cell,observed,5,ENSG00000119917
232
+ NK cell,observed,6,ENSG00000157601
233
+ NK cell,observed,7,ENSG00000126709
234
+ NK cell,observed,8,ENSG00000137965
235
+ NK cell,observed,9,ENSG00000124191
236
+ NK cell,observed,10,ENSG00000115155
237
+ NK cell,observed,11,ENSG00000132530
238
+ NK cell,observed,12,ENSG00000133106
239
+ NK cell,observed,13,ENSG00000196141
240
+ NK cell,observed,14,ENSG00000111335
241
+ NK cell,observed,15,ENSG00000137628
242
+ NK cell,observed,16,ENSG00000188313
243
+ NK cell,observed,17,ENSG00000121858
244
+ NK cell,observed,18,ENSG00000166750
245
+ NK cell,observed,19,ENSG00000135114
246
+ NK cell,observed,20,ENSG00000138646
247
+ NK cell,observed,21,ENSG00000183486
248
+ NK cell,observed,22,ENSG00000138496
249
+ NK cell,observed,23,ENSG00000068079
250
+ NK cell,observed,24,ENSG00000025708
251
+ NK cell,observed,25,ENSG00000187608
252
+ NK cell,observed,26,ENSG00000172954
253
+ NK cell,observed,27,ENSG00000165029
254
+ NK cell,observed,28,ENSG00000185507
255
+ NK cell,observed,29,ENSG00000277462
256
+ NK cell,observed,30,ENSG00000213782
257
+ NK cell,observed,31,ENSG00000184357
258
+ NK cell,observed,32,ENSG00000110841
259
+ NK cell,observed,33,ENSG00000055332
260
+ NK cell,observed,34,ENSG00000167196
261
+ NK cell,observed,35,ENSG00000163565
262
+ NK cell,observed,36,ENSG00000130702
263
+ NK cell,observed,37,ENSG00000205413
264
+ NK cell,observed,38,ENSG00000152778
265
+ NK cell,observed,39,ENSG00000103150
266
+ NK cell,observed,40,ENSG00000059378
267
+ NK cell,observed,41,ENSG00000160991
268
+ NK cell,observed,42,ENSG00000130023
269
+ NK cell,observed,43,ENSG00000180644
270
+ NK cell,observed,44,ENSG00000125637
271
+ NK cell,observed,45,ENSG00000164144
272
+ NK cell,observed,46,ENSG00000150961
273
+ NK cell,observed,47,ENSG00000006451
274
+ NK cell,observed,48,ENSG00000134982
275
+ NK cell,observed,49,ENSG00000175029
276
+ NK cell,observed,50,ENSG00000154127
277
+ NK cell,generated,1,ENSG00000187608
278
+ NK cell,generated,2,ENSG00000126709
279
+ NK cell,generated,3,ENSG00000132530
280
+ NK cell,generated,4,ENSG00000185507
281
+ NK cell,generated,5,ENSG00000133106
282
+ NK cell,generated,6,ENSG00000163947
283
+ NK cell,generated,7,ENSG00000088986
284
+ NK cell,generated,8,ENSG00000177409
285
+ NK cell,generated,9,ENSG00000107968
286
+ NK cell,generated,10,ENSG00000089127
287
+ NK cell,generated,11,ENSG00000163508
288
+ NK cell,generated,12,ENSG00000122643
289
+ NK cell,generated,13,ENSG00000047249
290
+ NK cell,generated,14,ENSG00000233927
291
+ NK cell,generated,15,ENSG00000109475
292
+ DC,observed,1,ENSG00000165949
293
+ DC,observed,2,ENSG00000137959
294
+ DC,observed,3,ENSG00000115155
295
+ DC,observed,4,ENSG00000185885
296
+ DC,observed,5,ENSG00000157168
297
+ DC,observed,6,ENSG00000117318
298
+ DC,observed,7,ENSG00000152766
299
+ DC,observed,8,ENSG00000187608
300
+ DC,observed,9,ENSG00000177409
301
+ DC,observed,10,ENSG00000172780
302
+ DC,observed,11,ENSG00000087903
303
+ DC,observed,12,ENSG00000089127
304
+ DC,observed,13,ENSG00000167641
305
+ DC,observed,14,ENSG00000132530
306
+ DC,observed,15,ENSG00000133106
307
+ DC,observed,16,ENSG00000102984
308
+ DC,observed,17,ENSG00000183486
309
+ DC,observed,18,ENSG00000111331
310
+ DC,observed,19,ENSG00000055332
311
+ DC,observed,20,ENSG00000163565
312
+ DC,observed,21,ENSG00000138496
313
+ DC,observed,22,ENSG00000124762
314
+ DC,observed,23,ENSG00000134326
315
+ DC,observed,24,ENSG00000136213
316
+ DC,observed,25,ENSG00000026751
317
+ DC,observed,26,ENSG00000068079
318
+ DC,observed,27,ENSG00000066084
319
+ DC,observed,28,ENSG00000198087
320
+ DC,observed,29,ENSG00000171608
321
+ DC,observed,30,ENSG00000140750
322
+ DC,observed,31,ENSG00000100852
323
+ DC,observed,32,ENSG00000196141
324
+ DC,observed,33,ENSG00000106785
325
+ DC,observed,34,ENSG00000064225
326
+ DC,observed,35,ENSG00000134242
327
+ DC,observed,36,ENSG00000117009
328
+ DC,observed,37,ENSG00000109861
329
+ DC,observed,38,ENSG00000146376
330
+ DC,observed,39,ENSG00000140968
331
+ DC,observed,40,ENSG00000002549
332
+ DC,observed,41,ENSG00000138035
333
+ DC,observed,42,ENSG00000138190
334
+ DC,observed,43,ENSG00000028116
335
+ DC,observed,44,ENSG00000173163
336
+ DC,observed,45,ENSG00000198162
337
+ DC,observed,46,ENSG00000177200
338
+ DC,observed,47,ENSG00000167851
339
+ DC,observed,48,ENSG00000111670
340
+ DC,observed,49,ENSG00000109756
341
+ DC,observed,50,ENSG00000138326
342
+ DC,generated,1,ENSG00000185885
343
+ DC,generated,2,ENSG00000157601
344
+ DC,generated,3,ENSG00000121552
345
+ DC,generated,4,ENSG00000109475
346
+ DC,generated,5,ENSG00000182899
347
+ all (input bulk),broadcast,1,ENSG00000165949
348
+ all (input bulk),broadcast,2,ENSG00000115155
349
+ all (input bulk),broadcast,3,ENSG00000185745
350
+ all (input bulk),broadcast,4,ENSG00000197561
351
+ all (input bulk),broadcast,5,ENSG00000005381
352
+ all (input bulk),broadcast,6,ENSG00000100448
353
+ all (input bulk),broadcast,7,ENSG00000119917
354
+ all (input bulk),broadcast,8,ENSG00000088827
355
+ all (input bulk),broadcast,9,ENSG00000137959
356
+ all (input bulk),broadcast,10,ENSG00000134321
357
+ all (input bulk),broadcast,11,ENSG00000148346
358
+ all (input bulk),broadcast,12,ENSG00000087116
359
+ all (input bulk),broadcast,13,ENSG00000179869
360
+ all (input bulk),broadcast,14,ENSG00000159189
361
+ all (input bulk),broadcast,15,ENSG00000272398
362
+ all (input bulk),broadcast,16,ENSG00000133069
363
+ all (input bulk),broadcast,17,ENSG00000152766
364
+ all (input bulk),broadcast,18,ENSG00000257017
365
+ all (input bulk),broadcast,19,ENSG00000100985
366
+ all (input bulk),broadcast,20,ENSG00000184979
367
+ all (input bulk),broadcast,21,ENSG00000158578
368
+ all (input bulk),broadcast,22,ENSG00000173369
369
+ all (input bulk),broadcast,23,ENSG00000079385
370
+ all (input bulk),broadcast,24,ENSG00000118520
371
+ all (input bulk),broadcast,25,ENSG00000138772
372
+ all (input bulk),broadcast,26,ENSG00000137198
373
+ all (input bulk),broadcast,27,ENSG00000119922
374
+ all (input bulk),broadcast,28,ENSG00000105610
375
+ all (input bulk),broadcast,29,ENSG00000146122
376
+ all (input bulk),broadcast,30,ENSG00000244734
377
+ all (input bulk),broadcast,31,ENSG00000148773
378
+ all (input bulk),broadcast,32,ENSG00000158373
379
+ all (input bulk),broadcast,33,ENSG00000169385
380
+ all (input bulk),broadcast,34,ENSG00000134326
381
+ all (input bulk),broadcast,35,ENSG00000149131
382
+ all (input bulk),broadcast,36,ENSG00000126787
383
+ all (input bulk),broadcast,37,ENSG00000153823
384
+ all (input bulk),broadcast,38,ENSG00000133063
385
+ all (input bulk),broadcast,39,ENSG00000126709
386
+ all (input bulk),broadcast,40,ENSG00000187608
387
+ all (input bulk),broadcast,41,ENSG00000123485
388
+ all (input bulk),broadcast,42,ENSG00000142089
389
+ all (input bulk),broadcast,43,ENSG00000089685
390
+ all (input bulk),broadcast,44,ENSG00000129538
391
+ all (input bulk),broadcast,45,ENSG00000131747
392
+ all (input bulk),broadcast,46,ENSG00000123610
393
+ all (input bulk),broadcast,47,ENSG00000101335
394
+ all (input bulk),broadcast,48,ENSG00000153234
395
+ all (input bulk),broadcast,49,ENSG00000186529
396
+ all (input bulk),broadcast,50,ENSG00000145386